Csor.00g035300 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g035300
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionaspartate-glutamate racemase family
LocationCsor_Chr14: 12583506 .. 12586187 (-)
RNA-Seq ExpressionCsor.00g035300
SyntenyCsor.00g035300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAATGTCTTTCCAGCTTTTAAGTACTCAATCTTGTCTATCTGCTTATGTAAAGACCCGTAGAATTCAGCTTCGATGGAGGTTGAATCCTGTTCAGGCTATACCACCACCATCAACTCTTTTGCACACTGATGAAAGTGAATATCTTCCGGAATCTAAAAAGGGTTCTGGGTTCAAATCAGTATTGAAAACGAGTAAAGATTCAACTGGTATTTTGCTCAGTCAATCAAATACAGTGGGTATATTAGGAGGATCTTCTGTTAATTCTACTGTAAACTTCTTGGGAAAATTAGTTAAATGGAGTACCAAAGATGGAGAATCTGGTCTTCCTTTTGTTCTTTGCTCTGACCCAACTCTTGGTAATGAGCTTCAAGTGTTTGATAAAAGTTCTCACCAAGTTCTCAACTACAAGAGTGAGGATCTAGGGTTGGATTCTGGACCATTAGTAGAGAGTTTGAAGAGTAAGAGAGATTTTCTCGAGAAGTCGGGTGCTCGTTGCATCGTTATGCCTTGTCACATATCTCATTTATGGTATGAAGATGTTTCAAAAGGGTGTCCTGTTACCTTCCTTCATATGGCTGATTGTGTTGCTAGAGAGCTCAAGGAAGCTAAGTTGAAGCCACTTGAAGCTGGGAGCCCATTACGGATTGGTGTTCTTGCAACCAATGCAATTTTAAGTGCAGGGTATTATCAGGAGAAACTGCAGAATGAAGTAGGCATCTCTTCATTGTTTTTGGACTTCATGGATCTTGAAGCTCTTATTCCTGTCTTCGAGCGATTTTTAACCGTAACGGAACAATACTTGTGTATATATGCAGGGATTTGAGGTGGTTCTTCCAGACAAAGCAACTATGGAACATACTGTAATTCCTGCAATTGAGGCTCTAAACAGAAAGGACATTGAAGGGGCAAGGAATTTACTACGAATTGCTCTTCAAGTTCTTCTGGTGAGGGCTGTCAACTCTGTCATCCTTGCCTCTGATGATATAAAGGATCTCTTGCCCCTTGATGATCCCCTTCTTAAGAGATGCATTGACCCAATGGACGCATTAGCAAGGTCCACTATCAATTGGGCACAATGTGCGAAATAAGGTATTTCAAGATCTCAATTTGTTGTAAACCATTTGAACTCTGCTAAAAATAATATCAGGAAATATGCCTAAAATCTACTGCATGGTTTCAAATTTTTCGAGTTATGAATCTCGTACAAGATCAATGCCGTTAGAATTGCTTTCTCATCCAACATGATCTTTCTCTCATTTCATAACAAAAGGAAGACCATTGCTCAAATAGAATTAGAAATATGTGATGTGATGTACTTTCCCTAGTTATCGTTTCAGCCTGCAGTTTACTTCTCATTTAGATGGTAGTATTCATTCATGAACCCTTGGTTGTGACCCTATCTACAGTTGAAAAGGATACTTTGGCTCCTCCATTTTTCTGAAAGAAAATTTAGATGTACGTTTAAATTGTAATCAAAGTTTGTTTTGAAATCATAACTCATAAAATGCATAGTTGTTCACTTCATCCTCTCAGCATCTCATTAGAATCTCTTGGAATAACATGGACGGAGTGTAACAGCCCAAGCTCACCGGTAGCAGATATTGTCTTCTTTGGGCTTTCCCTTTCGGATCTCCCCACAATGCTAGGGAGATGTTTCCACACCCTTATAAAGAATGTTTCGTTCCCCTCTCCAACCGATGTGTGATCTTACAATCCACCCCCCTTCGGAGCCTAGCGTCCTCGCTGGCACTCGTTTCCACTCCAATCGATGTTGTTCCCCTCTCTAATCGATGTGGAATCTCACATTGAGATTGACATATACCATTAAGAATAGTTCGTTGAGAATAATAGTACTCAAAAGTTCAAAAGTGTGCAGTTGGGAATGTTTTCCAGTAAAACGAAGGAAGGATGCAACAATGACGGCTAGAACTGCAAAATTGGAGTCATCTCTTGTTTCTTTCTTCTTTTTTTTTTTTTTCCTGATATCTGTGAGTGTCTTGAACTTGTCTCGGCACCTCTCGACTAATCTCATGAGACAACCCGCATGACCCTACGATATTTAAGTGCTAAGGAAATTTGTAAAGCAAAAAATCCTAGGTAGGTCCACCATGAATTGAACCCATTCCTTCAAAAAGCTGTTTGTTATACCTGAGACCATTAGGCCAATCTATGATGGTTTAATTTTGATCATCTTTGATTTTTGTTGTGTGTTCTTTCTGAGCAATATCTTATGCACTATGCTGTGTTTATAGCAACATTTTACTAGATGGATACAGTCTAATGCCACGAAGAAGCTACATAGCTAGTTTTTTAGAGGATGTTTGCCTTGTGATTCTAATTAATATAGGTTTGGAAAGTGTTAAGCTGGTGTAACCTGTGGTTGGGTTCTGCAGAAAAATGAGTTACAAAACTAAAGTTTATATAATCCATGTTAGGTTGGTCTGTGTTTTGTGGGTAAAATTTAACACAGTTACATATTGAGATAAACAAACCTACATACCAAATATGAGCTTTACTTAGATTTTTGGGTTCTTCTGAAAAGTTGTCTCCATTTTCCTTCACTTCACATGATGGTTGTTGTTTGTAGGCGAAGGATGGGCTTTCTGAATCATTGAACTGGTTTAGGCCATTGGGTTTGCTCCTGCGTTCCTTCCACAGGGTTGAGCTAGACGTGTAA

mRNA sequence

ATGACAATGTCTTTCCAGCTTTTAAGTACTCAATCTTGTCTATCTGCTTATGTAAAGACCCGTAGAATTCAGCTTCGATGGAGGTTGAATCCTGTTCAGGCTATACCACCACCATCAACTCTTTTGCACACTGATGAAAGTGAATATCTTCCGGAATCTAAAAAGGGTTCTGGGTTCAAATCAGTATTGAAAACGAGTAAAGATTCAACTGGTATTTTGCTCAGTCAATCAAATACAGTGGGTATATTAGGAGGATCTTCTGTTAATTCTACTGTAAACTTCTTGGGAAAATTAGTTAAATGGAGTACCAAAGATGGAGAATCTGGTCTTCCTTTTGTTCTTTGCTCTGACCCAACTCTTGGTAATGAGCTTCAAGTGTTTGATAAAAGTTCTCACCAAGTTCTCAACTACAAGAGTGAGGATCTAGGGTTGGATTCTGGACCATTAGTAGAGAGTTTGAAGAGTAAGAGAGATTTTCTCGAGAAGTCGGGTGCTCGTTGCATCGTTATGCCTTGTCACATATCTCATTTATGGTATGAAGATGTTTCAAAAGGGTGTCCTGTTACCTTCCTTCATATGGCTGATTGTGTTGCTAGAGAGCTCAAGGAAGCTAAGTTGAAGCCACTTGAAGCTGGGAGCCCATTACGGATTGGTGTTCTTGCAACCAATGCAATTTTAAGTGCAGGGTATTATCAGGAGAAACTGCAGAATGAAGGATTTGAGGTGGTTCTTCCAGACAAAGCAACTATGGAACATACTGTAATTCCTGCAATTGAGGCTCTAAACAGAAAGGACATTGAAGGGGCAAGGAATTTACTACGAATTGCTCTTCAAGTTCTTCTGCAAGGTCCACTATCAATTGGGCACAATGTGCGAAATAAGGCGAAGGATGGGCTTTCTGAATCATTGAACTGGTTTAGGCCATTGGGTTTGCTCCTGCGTTCCTTCCACAGGGTTGAGCTAGACGTGTAA

Coding sequence (CDS)

ATGACAATGTCTTTCCAGCTTTTAAGTACTCAATCTTGTCTATCTGCTTATGTAAAGACCCGTAGAATTCAGCTTCGATGGAGGTTGAATCCTGTTCAGGCTATACCACCACCATCAACTCTTTTGCACACTGATGAAAGTGAATATCTTCCGGAATCTAAAAAGGGTTCTGGGTTCAAATCAGTATTGAAAACGAGTAAAGATTCAACTGGTATTTTGCTCAGTCAATCAAATACAGTGGGTATATTAGGAGGATCTTCTGTTAATTCTACTGTAAACTTCTTGGGAAAATTAGTTAAATGGAGTACCAAAGATGGAGAATCTGGTCTTCCTTTTGTTCTTTGCTCTGACCCAACTCTTGGTAATGAGCTTCAAGTGTTTGATAAAAGTTCTCACCAAGTTCTCAACTACAAGAGTGAGGATCTAGGGTTGGATTCTGGACCATTAGTAGAGAGTTTGAAGAGTAAGAGAGATTTTCTCGAGAAGTCGGGTGCTCGTTGCATCGTTATGCCTTGTCACATATCTCATTTATGGTATGAAGATGTTTCAAAAGGGTGTCCTGTTACCTTCCTTCATATGGCTGATTGTGTTGCTAGAGAGCTCAAGGAAGCTAAGTTGAAGCCACTTGAAGCTGGGAGCCCATTACGGATTGGTGTTCTTGCAACCAATGCAATTTTAAGTGCAGGGTATTATCAGGAGAAACTGCAGAATGAAGGATTTGAGGTGGTTCTTCCAGACAAAGCAACTATGGAACATACTGTAATTCCTGCAATTGAGGCTCTAAACAGAAAGGACATTGAAGGGGCAAGGAATTTACTACGAATTGCTCTTCAAGTTCTTCTGCAAGGTCCACTATCAATTGGGCACAATGTGCGAAATAAGGCGAAGGATGGGCTTTCTGAATCATTGAACTGGTTTAGGCCATTGGGTTTGCTCCTGCGTTCCTTCCACAGGGTTGAGCTAGACGTGTAA

Protein sequence

MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFKSVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTLGNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYEDVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLQGPLSIGHNVRNKAKDGLSESLNWFRPLGLLLRSFHRVELDV
Homology
[Close]
BLAST of Csor.00g035300 vs. ExPASy Swiss-Prot
Match: P32968 (Uncharacterized protein in pnlA 3'region (Fragment) OS=Pectobacterium carotovorum subsp. carotovorum OX=555 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.6e-06
Identity = 32/105 (30.48%), Postives = 50/105 (47.62%), Query Frame = 0 

Query: 178 WYEDVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQN 237
           W+ D+ + C    + + D   + +K A        +  R+G+LAT A + A  YQ+ L  
Sbjct: 1   WFNDLKQQCRAEMISIIDVTCQAIKHA--------NTTRVGLLATTATVKARIYQDNLIT 60

Query: 238 EGFEVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLQ 283
           +  +   PD A  +H V+ +I A    DI GA +LL      LLQ
Sbjct: 61  DNIDCYTPDDAD-QHQVMESIYAYKSGDIAGAYSLLSPVKDRLLQ 96

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BLAST of Csor.00g035300 vs. ExPASy Swiss-Prot
Match: P32960 (Broad specificity amino-acid racemase RacX OS=Bacillus subtilis (strain 168) OX=224308 GN=racX PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 8.6e-06
Identity = 39/168 (23.21%), Postives = 71/168 (42.26%), Query Frame = 0 

Query: 80  VGILGGSSVNSTVNFLGKLVKWSTK-DGESGLPFVLCSDPTLGNELQVFDKSSHQVLNYK 139
           +GIL G    ST  F+ K++ +  K  G S             N++       +      
Sbjct: 2   IGILAGMGPKSTSPFIDKVIDYCQKLYGAS-------------NDIDYPHMMIYSCPTPF 61

Query: 140 SEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYEDVSKGCPVTFLHMADCVA 199
             D  +D   + +++      LEK+G   I +PC+ +H++YE++ +   V  LH+ +   
Sbjct: 62  YADRPIDHDEMKKAIIDGAVKLEKTGVDFIALPCNTAHVYYEEIQQALSVPMLHIVEETI 121

Query: 200 RELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEVVLPD 247
           +E+     K +         VL T   + +  YQ+ L+  G EV+  D
Sbjct: 122 KEIPHPAKKAV---------VLGTEPTIQSAIYQKVLKGNGQEVIHKD 147

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BLAST of Csor.00g035300 vs. NCBI nr
Match: KAG6581916.1 (hypothetical protein SDJN03_21918, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 639 bits (1649), Expect = 3.66e-231
Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0 

Query: 1   MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFK 60
           MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFK
Sbjct: 1   MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFK 60

Query: 61  SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL 120
           SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL
Sbjct: 61  SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL 120

Query: 121 GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE 180
           GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE
Sbjct: 121 GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE 180

Query: 181 DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 240
           DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF
Sbjct: 181 DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 240

Query: 241 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLQGPLSIGHNVRNKAKDGLS 300
           EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLQGPLSIGHNVRNKAKDGLS
Sbjct: 241 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLLQGPLSIGHNVRNKAKDGLS 300

Query: 301 ESLNWFRPLGLLLRSFHRVELDV 323
           ESLNWFRPLGLLLRSFHRVELDV
Sbjct: 301 ESLNWFRPLGLLLRSFHRVELDV 323

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BLAST of Csor.00g035300 vs. NCBI nr
Match: XP_023528030.1 (uncharacterized protein LOC111791072 [Cucurbita pepo subsp. pepo] >XP_023528032.1 uncharacterized protein LOC111791072 [Cucurbita pepo subsp. pepo] >XP_023528033.1 uncharacterized protein LOC111791072 [Cucurbita pepo subsp. pepo] >XP_023528034.1 uncharacterized protein LOC111791072 [Cucurbita pepo subsp. pepo] >KAG7018350.1 hypothetical protein SDJN02_20218 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 553 bits (1425), Expect = 6.02e-197
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0 

Query: 1   MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFK 60
           MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFK
Sbjct: 1   MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFK 60

Query: 61  SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL 120
           SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL
Sbjct: 61  SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL 120

Query: 121 GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE 180
           GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE
Sbjct: 121 GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE 180

Query: 181 DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 240
           DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF
Sbjct: 181 DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 240

Query: 241 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 281
           EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL
Sbjct: 241 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 281

[Close]
BLAST of Csor.00g035300 vs. NCBI nr
Match: XP_022980019.1 (uncharacterized protein LOC111479549 [Cucurbita maxima] >XP_022980020.1 uncharacterized protein LOC111479549 [Cucurbita maxima] >XP_022980021.1 uncharacterized protein LOC111479549 [Cucurbita maxima])

HSP 1 Score: 550 bits (1416), Expect = 1.41e-195
Identity = 279/281 (99.29%), Postives = 280/281 (99.64%), Query Frame = 0 

Query: 1   MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFK 60
           MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEY PESKKGSGFK
Sbjct: 1   MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYRPESKKGSGFK 60

Query: 61  SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL 120
           SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL
Sbjct: 61  SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL 120

Query: 121 GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE 180
           GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE
Sbjct: 121 GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE 180

Query: 181 DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 240
           DVSKGCPVTFLHMADCVAREL+EAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF
Sbjct: 181 DVSKGCPVTFLHMADCVARELREAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 240

Query: 241 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 281
           EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL
Sbjct: 241 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 281

[Close]
BLAST of Csor.00g035300 vs. NCBI nr
Match: XP_022955999.1 (uncharacterized protein LOC111457829 [Cucurbita moschata])

HSP 1 Score: 549 bits (1414), Expect = 2.85e-195
Identity = 279/281 (99.29%), Postives = 280/281 (99.64%), Query Frame = 0 

Query: 1   MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFK 60
           MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFK
Sbjct: 1   MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFK 60

Query: 61  SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL 120
           SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL
Sbjct: 61  SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL 120

Query: 121 GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE 180
           GNELQVFDKSSHQVLNYKSE+LGLDSGPLVESLKSKRD LEKSGARCIVMPCHISHLWYE
Sbjct: 121 GNELQVFDKSSHQVLNYKSENLGLDSGPLVESLKSKRDLLEKSGARCIVMPCHISHLWYE 180

Query: 181 DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 240
           DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF
Sbjct: 181 DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 240

Query: 241 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 281
           EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL
Sbjct: 241 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 281

[Close]
BLAST of Csor.00g035300 vs. NCBI nr
Match: XP_038892083.1 (broad specificity amino-acid racemase RacX [Benincasa hispida])

HSP 1 Score: 506 bits (1303), Expect = 2.13e-178
Identity = 258/279 (92.47%), Postives = 266/279 (95.34%), Query Frame = 0 

Query: 3   MSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFKSV 62
           MS QLLS+QSC+SAYV TRRIQ +WRLNP+QA+PP STLLHTDESE+ PESKK SGF SV
Sbjct: 1   MSCQLLSSQSCISAYVNTRRIQHQWRLNPLQALPPSSTLLHTDESEHFPESKKSSGFSSV 60

Query: 63  LKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTLGN 122
           LKTSKDSTGILLSQSN+VGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL N
Sbjct: 61  LKTSKDSTGILLSQSNSVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTLSN 120

Query: 123 ELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYEDV 182
           ELQVFDKSSH VLNYKSEDLGLDS  +VESLKSKR FLE SGARCIVMPCHISHLWYEDV
Sbjct: 121 ELQVFDKSSHPVLNYKSEDLGLDSRLVVESLKSKRAFLENSGARCIVMPCHISHLWYEDV 180

Query: 183 SKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV 242
           SKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV
Sbjct: 181 SKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEV 240

Query: 243 VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 281
           VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL
Sbjct: 241 VLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 279

[Close]
BLAST of Csor.00g035300 vs. ExPASy TrEMBL
Match: A0A6J1IUZ5 (uncharacterized protein LOC111479549 OS=Cucurbita maxima OX=3661 GN=LOC111479549 PE=3 SV=1)

HSP 1 Score: 550 bits (1416), Expect = 6.85e-196
Identity = 279/281 (99.29%), Postives = 280/281 (99.64%), Query Frame = 0 

Query: 1   MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFK 60
           MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEY PESKKGSGFK
Sbjct: 1   MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYRPESKKGSGFK 60

Query: 61  SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL 120
           SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL
Sbjct: 61  SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL 120

Query: 121 GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE 180
           GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE
Sbjct: 121 GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE 180

Query: 181 DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 240
           DVSKGCPVTFLHMADCVAREL+EAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF
Sbjct: 181 DVSKGCPVTFLHMADCVARELREAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 240

Query: 241 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 281
           EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL
Sbjct: 241 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 281

[Close]
BLAST of Csor.00g035300 vs. ExPASy TrEMBL
Match: A0A6J1GXT9 (uncharacterized protein LOC111457829 OS=Cucurbita moschata OX=3662 GN=LOC111457829 PE=3 SV=1)

HSP 1 Score: 549 bits (1414), Expect = 1.38e-195
Identity = 279/281 (99.29%), Postives = 280/281 (99.64%), Query Frame = 0 

Query: 1   MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFK 60
           MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFK
Sbjct: 1   MTMSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFK 60

Query: 61  SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL 120
           SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL
Sbjct: 61  SVLKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTL 120

Query: 121 GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE 180
           GNELQVFDKSSHQVLNYKSE+LGLDSGPLVESLKSKRD LEKSGARCIVMPCHISHLWYE
Sbjct: 121 GNELQVFDKSSHQVLNYKSENLGLDSGPLVESLKSKRDLLEKSGARCIVMPCHISHLWYE 180

Query: 181 DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 240
           DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF
Sbjct: 181 DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 240

Query: 241 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 281
           EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL
Sbjct: 241 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 281

[Close]
BLAST of Csor.00g035300 vs. ExPASy TrEMBL
Match: A0A0A0KVD7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004850 PE=3 SV=1)

HSP 1 Score: 503 bits (1294), Expect = 2.50e-177
Identity = 260/281 (92.53%), Postives = 268/281 (95.37%), Query Frame = 0 

Query: 3   MSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFKSV 62
           M+FQLLS+QSC+SAYV TRRIQL+WRLNPVQA+PP STLLHTDESE+ PESKK SGF SV
Sbjct: 1   MTFQLLSSQSCISAYVNTRRIQLQWRLNPVQALPP-STLLHTDESEHFPESKKTSGFSSV 60

Query: 63  LKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGES--GLPFVLCSDPTL 122
           LKT+KDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGES  GLPFVLCSDPTL
Sbjct: 61  LKTNKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESQSGLPFVLCSDPTL 120

Query: 123 GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE 182
            NELQVFDKSSH VLNYKSEDLGLDS  +VESLKSKR FLE SGARCIVMPCHISHLWYE
Sbjct: 121 SNELQVFDKSSHPVLNYKSEDLGLDSELVVESLKSKRTFLENSGARCIVMPCHISHLWYE 180

Query: 183 DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 242
           DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF
Sbjct: 181 DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 240

Query: 243 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 281
           EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL
Sbjct: 241 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 280

[Close]
BLAST of Csor.00g035300 vs. ExPASy TrEMBL
Match: A0A1S4E0P1 (probable amino-acid racemase OS=Cucumis melo OX=3656 GN=LOC103494713 PE=3 SV=1)

HSP 1 Score: 501 bits (1289), Expect = 1.44e-176
Identity = 259/281 (92.17%), Postives = 267/281 (95.02%), Query Frame = 0 

Query: 3   MSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFKSV 62
           M+FQLLS+QSC+SAYV TRRIQL+WRLNPVQA+PP STLLHTDESE+ PESKK SGF SV
Sbjct: 1   MTFQLLSSQSCISAYVNTRRIQLQWRLNPVQALPP-STLLHTDESEHFPESKKTSGFSSV 60

Query: 63  LKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGES--GLPFVLCSDPTL 122
           LKT+KDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGES  GLPFVLCSDPTL
Sbjct: 61  LKTNKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESQSGLPFVLCSDPTL 120

Query: 123 GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE 182
            NELQVFDKSSH VLNYKSEDLGLDS  +VESLK KR FLE SGARCIVMPCHISHLWYE
Sbjct: 121 SNELQVFDKSSHPVLNYKSEDLGLDSELVVESLKRKRTFLENSGARCIVMPCHISHLWYE 180

Query: 183 DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 242
           DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF
Sbjct: 181 DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 240

Query: 243 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 281
           EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL
Sbjct: 241 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 280

[Close]
BLAST of Csor.00g035300 vs. ExPASy TrEMBL
Match: A0A5A7TNI1 (Putative amino-acid racemase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001620 PE=3 SV=1)

HSP 1 Score: 501 bits (1289), Expect = 5.69e-175
Identity = 259/281 (92.17%), Postives = 267/281 (95.02%), Query Frame = 0 

Query: 3   MSFQLLSTQSCLSAYVKTRRIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFKSV 62
           M+FQLLS+QSC+SAYV TRRIQL+WRLNPVQA+PP STLLHTDESE+ PESKK SGF SV
Sbjct: 1   MTFQLLSSQSCISAYVNTRRIQLQWRLNPVQALPP-STLLHTDESEHFPESKKTSGFSSV 60

Query: 63  LKTSKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGES--GLPFVLCSDPTL 122
           LKT+KDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGES  GLPFVLCSDPTL
Sbjct: 61  LKTNKDSTGILLSQSNTVGILGGSSVNSTVNFLGKLVKWSTKDGESQSGLPFVLCSDPTL 120

Query: 123 GNELQVFDKSSHQVLNYKSEDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYE 182
            NELQVFDKSSH VLNYKSEDLGLDS  +VESLK KR FLE SGARCIVMPCHISHLWYE
Sbjct: 121 SNELQVFDKSSHPVLNYKSEDLGLDSELVVESLKRKRTFLENSGARCIVMPCHISHLWYE 180

Query: 183 DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 242
           DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF
Sbjct: 181 DVSKGCPVTFLHMADCVARELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGF 240

Query: 243 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 281
           EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL
Sbjct: 241 EVVLPDKATMEHTVIPAIEALNRKDIEGARNLLRIALQVLL 280

[Close]
BLAST of Csor.00g035300 vs. TAIR 10
Match: AT1G15410.1 (aspartate-glutamate racemase family )

HSP 1 Score: 311.6 bits (797), Expect = 7.3e-85
Identity = 154/262 (58.78%), Postives = 202/262 (77.10%), Query Frame = 0 

Query: 22  RIQLRWRLNPVQAIPPPSTLLHTDESEYLPESKKGSGFKSVLKTSKDS--TGILLSQSNT 81
           R+  R RL+ V A+PP S LLH DES  LP+ KKG       + S +S     LL Q+NT
Sbjct: 21  RVSCRVRLSRVLAMPPSSVLLHMDESNDLPKPKKGFCLSEDSRNSLNSLPADSLLRQANT 80

Query: 82  VGILGGSSVNSTVNFLGKLVKWSTKDGESGLPFVLCSDPTLGNELQVFDKSSHQVLNYKS 141
           VGI+GG S +ST+ F+ KLV WS+ DG+S LPFVLCSDP L  EL +++++S+  L ++ 
Sbjct: 81  VGIIGGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPALNKELLLYEENSYPSLYHRE 140

Query: 142 EDLGLDSGPLVESLKSKRDFLEKSGARCIVMPCHISHLWYEDVSKGCPVTFLHMADCVAR 201
           E   +D   +VE+L++KR +LE+ GA+ I+MPCHI+H+WYE+V +G  V  LHM +C+A+
Sbjct: 141 ESTPVDPKLIVENLRNKRRYLERCGAKLILMPCHIAHIWYEEVCEGSLVPLLHMGECIAK 200

Query: 202 ELKEAKLKPLEAGSPLRIGVLATNAILSAGYYQEKLQNEGFEVVLPDKATMEHTVIPAIE 261
           EL+EAK+KPLEAG+PLR+GV+AT+A LSAG+YQEKLQ+ GFE VLPDKATMEHTVIP+IE
Sbjct: 201 ELQEAKMKPLEAGNPLRVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIE 260

Query: 262 ALNRKDIEGARNLLRIALQVLL 282
           A+ RKD+EGARNLLRIALQVLL
Sbjct: 261 AMKRKDMEGARNLLRIALQVLL 282

The following BLAST results are available for this feature:
BLAST of Csor.00g035300 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P329686.6e-0630.48Uncharacterized protein in pnlA 3'region (Fragment) OS=Pectobacterium carotovoru... [more]
P329608.6e-0623.21Broad specificity amino-acid racemase RacX OS=Bacillus subtilis (strain 168) OX=... [more]
BLAST of Csor.00g035300 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6581916.13.66e-231100.00hypothetical protein SDJN03_21918, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023528030.16.02e-197100.00uncharacterized protein LOC111791072 [Cucurbita pepo subsp. pepo] >XP_023528032.... [more]
XP_022980019.11.41e-19599.29uncharacterized protein LOC111479549 [Cucurbita maxima] >XP_022980020.1 uncharac... [more]
XP_022955999.12.85e-19599.29uncharacterized protein LOC111457829 [Cucurbita moschata][more]
XP_038892083.12.13e-17892.47broad specificity amino-acid racemase RacX [Benincasa hispida][more]
BLAST of Csor.00g035300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IUZ56.85e-19699.29uncharacterized protein LOC111479549 OS=Cucurbita maxima OX=3661 GN=LOC111479549... [more]
A0A6J1GXT91.38e-19599.29uncharacterized protein LOC111457829 OS=Cucurbita moschata OX=3662 GN=LOC1114578... [more]
A0A0A0KVD72.50e-17792.53Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004850 PE=3 SV=1[more]
A0A1S4E0P11.44e-17692.17probable amino-acid racemase OS=Cucumis melo OX=3656 GN=LOC103494713 PE=3 SV=1[more]
A0A5A7TNI15.69e-17592.17Putative amino-acid racemase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
BLAST of Csor.00g035300 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G15410.17.3e-8558.78aspartate-glutamate racemase family [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1860coord: 212..285
e-value: 6.0E-9
score: 38.1
NoneNo IPR availableGENE3D3.40.50.1860coord: 78..207
e-value: 2.1E-26
score: 94.6
NoneNo IPR availablePANTHERPTHR21198GLUTAMATE RACEMASEcoord: 2..282
IPR015942Asp/Glu/hydantoin racemasePFAMPF01177Asp_Glu_racecoord: 83..282
e-value: 1.1E-17
score: 64.5
IPR004380Aspartate racemasePANTHERPTHR21198:SF7ASPARTATE-GLUTAMATE RACEMASE FAMILYcoord: 2..282
IPR001920Asp/Glu racemaseSUPERFAMILY53681Aspartate/glutamate racemasecoord: 79..203
IPR001920Asp/Glu racemaseSUPERFAMILY53681Aspartate/glutamate racemasecoord: 211..282

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g035300.m01Csor.00g035300.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006807 nitrogen compound metabolic process
molecular_function GO:0047661 amino-acid racemase activity
molecular_function GO:0036361 racemase activity, acting on amino acids and derivatives
molecular_function GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives