Csor.00g035060 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g035060
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Dynein light chain
Location	Csor_Chr14: 12439890 .. 12440352 (-)
RNA-Seq Expression	Csor.00g035060
Synteny	Csor.00g035060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGAAGGGAAAGCTTTGATTGCTGATACAGACATGCCTCTCAAGTTGCAGATCCAAGCCATGAAAGCTGCTTCTGAAGCTCTCGATCTTTATGATGTTTTTGACTCTAAATCCATTGCTGCCCACATCAAGAAGGTCATTTATATTCGATTTTCGATGTCGGTATTATGTGAAATTGTCTACTTCTGAGCTGAGTTCTATCACTAAAGTTGAGCGAGAACTTGGTTTGATCTTCCATTCATGGTTTTGTGGATTTGTTTGTGTAAATGATGGTTCAATTTTTGTGCAGAAGTTTGATGATGGGCATGGGATGGGATGGCAATGCGTGGTGGGTTCCAATTTTGGGAGCTTTTTCACTCATTCTCAAGGGACTTTCATCTACTTCACTTTGGAGACTCTCAACTTTCTTATCTTCAAAGGCCCTTCTCCTTCCGTATCGAGTCGCGTAGATATCGTTTGA

mRNA sequence

ATGCTGGAAGGGAAAGCTTTGATTGCTGATACAGACATGCCTCTCAAGTTGCAGATCCAAGCCATGAAAGCTGCTTCTGAAGCTCTCGATCTTTATGATGTTTTTGACTCTAAATCCATTGCTGCCCACATCAAGAAGAAGTTTGATGATGGGCATGGGATGGGATGGCAATGCGTGGTGGGTTCCAATTTTGGGAGCTTTTTCACTCATTCTCAAGGGACTTTCATCTACTTCACTTTGGAGACTCTCAACTTTCTTATCTTCAAAGGCCCTTCTCCTTCCGTATCGAGTCGCGTAGATATCGTTTGA

Coding sequence (CDS)

ATGCTGGAAGGGAAAGCTTTGATTGCTGATACAGACATGCCTCTCAAGTTGCAGATCCAAGCCATGAAAGCTGCTTCTGAAGCTCTCGATCTTTATGATGTTTTTGACTCTAAATCCATTGCTGCCCACATCAAGAAGAAGTTTGATGATGGGCATGGGATGGGATGGCAATGCGTGGTGGGTTCCAATTTTGGGAGCTTTTTCACTCATTCTCAAGGGACTTTCATCTACTTCACTTTGGAGACTCTCAACTTTCTTATCTTCAAAGGCCCTTCTCCTTCCGTATCGAGTCGCGTAGATATCGTTTGA

Protein sequence

MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVVGSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSSRVDIV

Homology

[Close]

BLAST of Csor.00g035060 vs. ExPASy Swiss-Prot
Match: P61285 (Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-13
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK+FD  +   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNI--EKDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFK 90
          G NFGS+ TH    FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of Csor.00g035060 vs. ExPASy Swiss-Prot
Match: P63167 (Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-13
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK+FD  +   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNI--EKDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFK 90
          G NFGS+ TH    FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of Csor.00g035060 vs. ExPASy Swiss-Prot
Match: P61273 (Dynein light chain 1, cytoplasmic OS=Macaca fascicularis OX=9541 GN=DYNLL1 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-13
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK+FD  +   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNI--EKDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFK 90
          G NFGS+ TH    FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of Csor.00g035060 vs. ExPASy Swiss-Prot
Match: P63168 (Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-13
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK+FD  +   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNI--EKDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFK 90
          G NFGS+ TH    FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of Csor.00g035060 vs. ExPASy Swiss-Prot
Match: P63169 (Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus OX=9986 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-13
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          M + KA+I + DM  ++Q  +++ A++AL+ Y++   K IAAHIKK+FD  +   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNI--EKDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFK 90
          G NFGS+ TH    FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of Csor.00g035060 vs. NCBI nr
Match: KAG6581892.1 (Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018326.1 Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204 bits (520), Expect = 2.46e-66
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
           MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV
Sbjct: 1   MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60

Query: 61  GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSSRVDIV 102
           GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSSRVDIV
Sbjct: 61  GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSSRVDIV 102

[Close]

BLAST of Csor.00g035060 vs. NCBI nr
Match: XP_022955724.1 (dynein light chain 1, cytoplasmic-like [Cucurbita moschata])

HSP 1 Score: 204 bits (519), Expect = 3.49e-66
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
           MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV
Sbjct: 1   MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60

Query: 61  GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSSRVDIV 102
           GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPS+SSRVDIV
Sbjct: 61  GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSISSRVDIV 102

[Close]

BLAST of Csor.00g035060 vs. NCBI nr
Match: XP_023529016.1 (dynein light chain 1, cytoplasmic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203 bits (517), Expect = 7.04e-66
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
           MLEGKALIADTDMPLKLQIQAMKAASEALDLYDV+DSKSIAAHIKKKFDDGHGMGWQCVV
Sbjct: 1   MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVYDSKSIAAHIKKKFDDGHGMGWQCVV 60

Query: 61  GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSSRVDIV 102
           GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSSRVDIV
Sbjct: 61  GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSSRVDIV 102

[Close]

BLAST of Csor.00g035060 vs. NCBI nr
Match: XP_038713603.1 (dynein light chain LC6, flagellar outer arm-like [Tripterygium wilfordii] >KAF5741673.1 dynein light chain 1 cytoplasmic-like [Tripterygium wilfordii])

HSP 1 Score: 156 bits (395), Expect = 2.45e-47
Identity = 76/97 (78.35%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKAL+ DTDMP+K+QIQAM +AS+ALDLYDVFD KSIAAHIKK+FD G+G GWQCVV
Sbjct: 1  MLEGKALVEDTDMPMKMQIQAMASASQALDLYDVFDCKSIAAHIKKEFDMGYGSGWQCVV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSS 97
          GSNFG +FTHS+GTFIYF LETLNFLIFKG S   S+
Sbjct: 61 GSNFGCYFTHSEGTFIYFKLETLNFLIFKGVSSPSSA 97

[Close]

BLAST of Csor.00g035060 vs. NCBI nr
Match: XP_010098076.1 (dynein light chain 1, cytoplasmic [Morus notabilis] >EXB74513.1 Dynein light chain 1 [Morus notabilis])

HSP 1 Score: 156 bits (395), Expect = 2.53e-47
Identity = 77/97 (79.38%), Postives = 87/97 (89.69%), Query Frame = 0


Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKALI DTDMP+K+QIQAM AAS+ALD+YDVFD +SIAAHIKK+FD  +G GWQCVV
Sbjct: 1  MLEGKALIEDTDMPVKMQIQAMAAASQALDIYDVFDCRSIAAHIKKEFDKRYGPGWQCVV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSS 97
          GSNFG FFTHS+GTFIYFTLETL+FLIFKG + S SS
Sbjct: 61 GSNFGCFFTHSKGTFIYFTLETLSFLIFKGATSSSSS 97

[Close]

BLAST of Csor.00g035060 vs. ExPASy TrEMBL
Match: A0A6J1GX40 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111457636 PE=3 SV=1)

HSP 1 Score: 204 bits (519), Expect = 1.69e-66
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
           MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV
Sbjct: 1   MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60

Query: 61  GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSSRVDIV 102
           GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPS+SSRVDIV
Sbjct: 61  GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSISSRVDIV 102

[Close]

BLAST of Csor.00g035060 vs. ExPASy TrEMBL
Match: A0A7J7D5T1 (Dynein light chain OS=Tripterygium wilfordii OX=458696 GN=HS088_TW10G00677 PE=3 SV=1)

HSP 1 Score: 156 bits (395), Expect = 1.19e-47
Identity = 76/97 (78.35%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKAL+ DTDMP+K+QIQAM +AS+ALDLYDVFD KSIAAHIKK+FD G+G GWQCVV
Sbjct: 1  MLEGKALVEDTDMPMKMQIQAMASASQALDLYDVFDCKSIAAHIKKEFDMGYGSGWQCVV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSS 97
          GSNFG +FTHS+GTFIYF LETLNFLIFKG S   S+
Sbjct: 61 GSNFGCYFTHSEGTFIYFKLETLNFLIFKGVSSPSSA 97

[Close]

BLAST of Csor.00g035060 vs. ExPASy TrEMBL
Match: W9RUV7 (Dynein light chain OS=Morus notabilis OX=981085 GN=L484_026208 PE=3 SV=1)

HSP 1 Score: 156 bits (395), Expect = 1.23e-47
Identity = 77/97 (79.38%), Postives = 87/97 (89.69%), Query Frame = 0


Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKALI DTDMP+K+QIQAM AAS+ALD+YDVFD +SIAAHIKK+FD  +G GWQCVV
Sbjct: 1  MLEGKALIEDTDMPVKMQIQAMAAASQALDIYDVFDCRSIAAHIKKEFDKRYGPGWQCVV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVSS 97
          GSNFG FFTHS+GTFIYFTLETL+FLIFKG + S SS
Sbjct: 61 GSNFGCFFTHSKGTFIYFTLETLSFLIFKGATSSSSS 97

[Close]

BLAST of Csor.00g035060 vs. ExPASy TrEMBL
Match: A0A1U7ZJG1 (Dynein light chain OS=Nelumbo nucifera OX=4432 GN=LOC104595179 PE=3 SV=1)

HSP 1 Score: 156 bits (394), Expect = 1.85e-47
Identity = 78/100 (78.00%), Postives = 86/100 (86.00%), Query Frame = 0


Query: 1   MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
           MLEGKALI DTDMP+K+QIQAM +AS+ALDLYDVFD KSIAAHIKK+FD  +G GWQCVV
Sbjct: 1   MLEGKALIEDTDMPVKMQIQAMSSASQALDLYDVFDCKSIAAHIKKEFDTTYGSGWQCVV 60

Query: 61  GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPS--PSVSSR 98
           GSNFG FFTHSQGTFIYF LETL FLIFKG S  P++S  
Sbjct: 61  GSNFGCFFTHSQGTFIYFALETLKFLIFKGASSAPAISGN 100

[Close]

BLAST of Csor.00g035060 vs. ExPASy TrEMBL
Match: A0A022Q4N8 (Dynein light chain OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017027mg PE=3 SV=1)

HSP 1 Score: 155 bits (393), Expect = 2.33e-47
Identity = 78/96 (81.25%), Postives = 84/96 (87.50%), Query Frame = 0


Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKALI DTDMPLK+QIQAM  AS+ALDLYDV D KSIAAHIKK+FD  +G GWQCVV
Sbjct: 1  MLEGKALIEDTDMPLKMQIQAMGCASQALDLYDVLDCKSIAAHIKKEFDKKYGSGWQCVV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPSPSVS 96
          GSNFG FFTHS+G+FIYFTLETLNFLIFKG S S S
Sbjct: 61 GSNFGCFFTHSKGSFIYFTLETLNFLIFKGSSSSSS 96

[Close]

BLAST of Csor.00g035060 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 146.4 bits (368), Expect = 1.3e-35
Identity = 69/92 (75.00%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKA++ D+DMP+K+Q+QAM  AS+ALDL+DVFD KSIA HIKK+FD+ +G GWQCVV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKGPS 93
          GSNFG FFTHS+GTFIYF LETL FLIFKG S
Sbjct: 61 GSNFGCFFTHSKGTFIYFQLETLKFLIFKGAS 92

[Close]

BLAST of Csor.00g035060 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 143.7 bits (361), Expect = 8.4e-35
Identity = 68/90 (75.56%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKA + +TDMP+K+Q+QAMK AS++LDL+DVFDS SIAAHIKK+FD+ +G GWQCVV
Sbjct: 1  MLEGKAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKG 91
          G+NFG FFTHS+GTFIYF L TLNFLIFKG
Sbjct: 61 GTNFGCFFTHSKGTFIYFHLGTLNFLIFKG 90

[Close]

BLAST of Csor.00g035060 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 47/90 (52.22%), Postives = 65/90 (72.22%), Query Frame = 0


Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVV 60
          MLEGKA++ DTDM   ++  A+  AS+ALD +DV +   IA  IKK+FD  +G GWQC+V
Sbjct: 1  MLEGKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIV 60

Query: 61 GSNFGSFFTHSQGTFIYFTLETLNFLIFKG 91
          G++FGSF TH  G FI+F++ +L  L+FKG
Sbjct: 61 GTHFGSFVTHCSGCFIHFSVGSLTILLFKG 90

[Close]

BLAST of Csor.00g035060 vs. TAIR 10
Match: AT1G52240.1 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 91.7 bits (226), Expect = 3.8e-19
Identity = 41/59 (69.49%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 1  MLEGKALIADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCV 60
          MLEGKA++ D+DMP+K+Q+QAM  AS+ALDL+DVFD KSIA HIKK+FD+ +G GWQCV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCV 59

[Close]

BLAST of Csor.00g035060 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 83.2 bits (204), Expect = 1.3e-16
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 0


Query: 8   IADTDMPLKLQIQAMKAASEALDLYDVFDSKSIAAHIKKKFDDGHGMGWQCVVGSNFGSF 67
           I   DMP  +Q  A + A   LD  + F SK +A ++KK+FD G+G  W C+VGS+FGSF
Sbjct: 119 ILAADMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGSF 178

Query: 68  FTHSQGTFIYFTLETLNFLIFK 90
            THS G FIYF+++ L  L+FK
Sbjct: 179 VTHSTGCFIYFSMDKLYVLLFK 200

The following BLAST results are available for this feature:

BLAST of Csor.00g035060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P61285	1.8e-13	43.82	Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1	[more]
P63167	1.8e-13	43.82	Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1	[more]
P61273	1.8e-13	43.82	Dynein light chain 1, cytoplasmic OS=Macaca fascicularis OX=9541 GN=DYNLL1 PE=3 ...	[more]
P63168	1.8e-13	43.82	Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1	[more]
P63169	1.8e-13	43.82	Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus OX=9986 GN=DYNLL1 PE=...	[more]

BLAST of Csor.00g035060 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581892.1	2.46e-66	100.00	Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022955724.1	3.49e-66	99.02	dynein light chain 1, cytoplasmic-like [Cucurbita moschata]	[more]
XP_023529016.1	7.04e-66	99.02	dynein light chain 1, cytoplasmic-like [Cucurbita pepo subsp. pepo]	[more]
XP_038713603.1	2.45e-47	78.35	dynein light chain LC6, flagellar outer arm-like [Tripterygium wilfordii] >KAF57...	[more]
XP_010098076.1	2.53e-47	79.38	dynein light chain 1, cytoplasmic [Morus notabilis] >EXB74513.1 Dynein light cha...	[more]

BLAST of Csor.00g035060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GX40	1.69e-66	99.02	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111457636 PE=3 SV=1	[more]
A0A7J7D5T1	1.19e-47	78.35	Dynein light chain OS=Tripterygium wilfordii OX=458696 GN=HS088_TW10G00677 PE=3 ...	[more]
W9RUV7	1.23e-47	79.38	Dynein light chain OS=Morus notabilis OX=981085 GN=L484_026208 PE=3 SV=1	[more]
A0A1U7ZJG1	1.85e-47	78.00	Dynein light chain OS=Nelumbo nucifera OX=4432 GN=LOC104595179 PE=3 SV=1	[more]
A0A022Q4N8	2.33e-47	81.25	Dynein light chain OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017027mg PE=3 SV...	[more]

BLAST of Csor.00g035060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52240.2	1.3e-35	75.00	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	8.4e-35	75.56	Dynein light chain type 1 family protein	[more]
AT4G27360.1	1.1e-21	52.22	Dynein light chain type 1 family protein	[more]
AT1G52240.1	3.8e-19	69.49	RHO guanyl-nucleotide exchange factor 11	[more]
AT5G20110.1	1.3e-16	48.78	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 1..90 e-value: 7.4E-35 score: 131.8
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 5..89 e-value: 6.4E-28 score: 97.0
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..92
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 1..90 e-value: 2.4E-28 score: 100.2
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 1..91
None	No IPR available	PANTHER	PTHR11886:SF78	DYNEIN LIGHT CHAIN	coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g035060.m01	Csor.00g035060.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0005874	microtubule
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding