Csor.00g031690 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGTACCAAATCAAAGCAGCAAATTGAAGCCAGACAAGTTTACAGGCAAGAAGCAGCAACAAGAAGAGAAAGGGCATTGGCGTATGCTTACTCTCATCAGGTTCAATTCGTTTCCATTTCTTCCTGATTTGATTATCATCTCCCTTCTCAGATCATTGATTTTCATTCTCATCGCCGTTTCCCCACGGCAGCGCGACTCCAGATAAGGCACCAGCCAGTGGCGGCGTAAAGAAACGGCTCTCGTTCCCCGCCTCGCCGGCGAACTCGAGGAGGCACTCTGGTCCGCCGAAAGTAGACACTAACCCGATCAAGAATGTTGCAGACAGAGATTTCACCGGCGAGAGCCGATAG ATGACAGTACCAAATCAAAGCAGCAAATTGAAGCCAGACAAGTTTACAGGCAAGAAGCAGCAACAAGAAGAGAAAGGGCATTGGCGTATGCTTACTCTCATCAGCGCGACTCCAGATAAGGCACCAGCCAGTGGCGGCGTAAAGAAACGGCTCTCGTTCCCCGCCTCGCCGGCGAACTCGAGGAGGCACTCTGGTCCGCCGAAAGTAGACACTAACCCGATCAAGAATGTTGCAGACAGAGATTTCACCGGCGAGAGCCGATAG ATGACAGTACCAAATCAAAGCAGCAAATTGAAGCCAGACAAGTTTACAGGCAAGAAGCAGCAACAAGAAGAGAAAGGGCATTGGCGTATGCTTACTCTCATCAGCGCGACTCCAGATAAGGCACCAGCCAGTGGCGGCGTAAAGAAACGGCTCTCGTTCCCCGCCTCGCCGGCGAACTCGAGGAGGCACTCTGGTCCGCCGAAAGTAGACACTAACCCGATCAAGAATGTTGCAGACAGAGATTTCACCGGCGAGAGCCGATAG MTVPNQSSKLKPDKFTGKKQQQEEKGHWRMLTLISATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVADRDFTGESR Homology
BLAST of Csor.00g031690 vs. NCBI nr
Match: KAG6578744.1 (hypothetical protein SDJN03_23192, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 178 bits (451), Expect = 2.79e-56 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of Csor.00g031690 vs. NCBI nr
Match: XP_022938919.1 (protein IQ-DOMAIN 1-like [Cucurbita moschata]) HSP 1 Score: 108 bits (271), Expect = 1.49e-25 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of Csor.00g031690 vs. NCBI nr
Match: KAG7016273.1 (Protein IQ-DOMAIN 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 108 bits (271), Expect = 1.49e-25 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of Csor.00g031690 vs. NCBI nr
Match: XP_022993423.1 (protein IQ-DOMAIN 1-like [Cucurbita maxima]) HSP 1 Score: 104 bits (259), Expect = 7.02e-24 Identity = 49/52 (94.23%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Csor.00g031690 vs. NCBI nr
Match: XP_023551502.1 (protein IQ-DOMAIN 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 90.9 bits (224), Expect = 5.12e-19 Identity = 46/53 (86.79%), Postives = 48/53 (90.57%), Query Frame = 0
BLAST of Csor.00g031690 vs. ExPASy TrEMBL
Match: A0A6J1FFI1 (protein IQ-DOMAIN 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444987 PE=4 SV=1) HSP 1 Score: 108 bits (271), Expect = 7.21e-26 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of Csor.00g031690 vs. ExPASy TrEMBL
Match: A0A6J1K263 (protein IQ-DOMAIN 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489440 PE=4 SV=1) HSP 1 Score: 104 bits (259), Expect = 3.40e-24 Identity = 49/52 (94.23%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Csor.00g031690 vs. ExPASy TrEMBL
Match: A0A6J1E0I5 (protein IQ-DOMAIN 1-like OS=Cucurbita moschata OX=3662 GN=LOC111429725 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 9.21e-16 Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 0
BLAST of Csor.00g031690 vs. ExPASy TrEMBL
Match: A0A5D3C337 (Protein IQ-DOMAIN 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001970 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 8.23e-15 Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 0
BLAST of Csor.00g031690 vs. ExPASy TrEMBL
Match: A0A1S3CJK9 (protein IQ-DOMAIN 1-like OS=Cucumis melo OX=3656 GN=LOC103501685 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 8.23e-15 Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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