Csor.00g031690 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g031690
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionprotein IQ-DOMAIN 1-like
LocationCsor_Chr15: 2003305 .. 2003659 (-)
RNA-Seq ExpressionCsor.00g031690
SyntenyCsor.00g031690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGTACCAAATCAAAGCAGCAAATTGAAGCCAGACAAGTTTACAGGCAAGAAGCAGCAACAAGAAGAGAAAGGGCATTGGCGTATGCTTACTCTCATCAGGTTCAATTCGTTTCCATTTCTTCCTGATTTGATTATCATCTCCCTTCTCAGATCATTGATTTTCATTCTCATCGCCGTTTCCCCACGGCAGCGCGACTCCAGATAAGGCACCAGCCAGTGGCGGCGTAAAGAAACGGCTCTCGTTCCCCGCCTCGCCGGCGAACTCGAGGAGGCACTCTGGTCCGCCGAAAGTAGACACTAACCCGATCAAGAATGTTGCAGACAGAGATTTCACCGGCGAGAGCCGATAG

mRNA sequence

ATGACAGTACCAAATCAAAGCAGCAAATTGAAGCCAGACAAGTTTACAGGCAAGAAGCAGCAACAAGAAGAGAAAGGGCATTGGCGTATGCTTACTCTCATCAGCGCGACTCCAGATAAGGCACCAGCCAGTGGCGGCGTAAAGAAACGGCTCTCGTTCCCCGCCTCGCCGGCGAACTCGAGGAGGCACTCTGGTCCGCCGAAAGTAGACACTAACCCGATCAAGAATGTTGCAGACAGAGATTTCACCGGCGAGAGCCGATAG

Coding sequence (CDS)

ATGACAGTACCAAATCAAAGCAGCAAATTGAAGCCAGACAAGTTTACAGGCAAGAAGCAGCAACAAGAAGAGAAAGGGCATTGGCGTATGCTTACTCTCATCAGCGCGACTCCAGATAAGGCACCAGCCAGTGGCGGCGTAAAGAAACGGCTCTCGTTCCCCGCCTCGCCGGCGAACTCGAGGAGGCACTCTGGTCCGCCGAAAGTAGACACTAACCCGATCAAGAATGTTGCAGACAGAGATTTCACCGGCGAGAGCCGATAG

Protein sequence

MTVPNQSSKLKPDKFTGKKQQQEEKGHWRMLTLISATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVADRDFTGESR
Homology
BLAST of Csor.00g031690 vs. NCBI nr
Match: KAG6578744.1 (hypothetical protein SDJN03_23192, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 178 bits (451), Expect = 2.79e-56
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0

Query: 1  MTVPNQSSKLKPDKFTGKKQQQEEKGHWRMLTLISATPDKAPASGGVKKRLSFPASPANS 60
          MTVPNQSSKLKPDKFTGKKQQQEEKGHWRMLTLISATPDKAPASGGVKKRLSFPASPANS
Sbjct: 1  MTVPNQSSKLKPDKFTGKKQQQEEKGHWRMLTLISATPDKAPASGGVKKRLSFPASPANS 60

Query: 61 RRHSGPPKVDTNPIKNVADRDFTGESR 87
          RRHSGPPKVDTNPIKNVADRDFTGESR
Sbjct: 61 RRHSGPPKVDTNPIKNVADRDFTGESR 87

BLAST of Csor.00g031690 vs. NCBI nr
Match: XP_022938919.1 (protein IQ-DOMAIN 1-like [Cucurbita moschata])

HSP 1 Score: 108 bits (271), Expect = 1.49e-25
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 35  SATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVADRDFTGESR 87
           +ATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVADRDFTGESR
Sbjct: 427 AATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVADRDFTGESR 479

BLAST of Csor.00g031690 vs. NCBI nr
Match: KAG7016273.1 (Protein IQ-DOMAIN 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 108 bits (271), Expect = 1.49e-25
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 35  SATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVADRDFTGESR 87
           +ATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVADRDFTGESR
Sbjct: 427 AATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVADRDFTGESR 479

BLAST of Csor.00g031690 vs. NCBI nr
Match: XP_022993423.1 (protein IQ-DOMAIN 1-like [Cucurbita maxima])

HSP 1 Score: 104 bits (259), Expect = 7.02e-24
Identity = 49/52 (94.23%), Postives = 52/52 (100.00%), Query Frame = 0

Query: 35  SATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVADRDFTGES 86
           +ATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVA+RDFTGE+
Sbjct: 423 AATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVAERDFTGEN 474

BLAST of Csor.00g031690 vs. NCBI nr
Match: XP_023551502.1 (protein IQ-DOMAIN 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.9 bits (224), Expect = 5.12e-19
Identity = 46/53 (86.79%), Postives = 48/53 (90.57%), Query Frame = 0

Query: 35  SATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVADRDFTGESR 87
           +ATPDKAPASGGVKKRLSFPASPA SRRHSGPPKVDTNPI+    RDFTGESR
Sbjct: 427 AATPDKAPASGGVKKRLSFPASPAISRRHSGPPKVDTNPIE----RDFTGESR 475

BLAST of Csor.00g031690 vs. ExPASy TrEMBL
Match: A0A6J1FFI1 (protein IQ-DOMAIN 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444987 PE=4 SV=1)

HSP 1 Score: 108 bits (271), Expect = 7.21e-26
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 35  SATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVADRDFTGESR 87
           +ATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVADRDFTGESR
Sbjct: 427 AATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVADRDFTGESR 479

BLAST of Csor.00g031690 vs. ExPASy TrEMBL
Match: A0A6J1K263 (protein IQ-DOMAIN 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489440 PE=4 SV=1)

HSP 1 Score: 104 bits (259), Expect = 3.40e-24
Identity = 49/52 (94.23%), Postives = 52/52 (100.00%), Query Frame = 0

Query: 35  SATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVADRDFTGES 86
           +ATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVA+RDFTGE+
Sbjct: 423 AATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVAERDFTGEN 474

BLAST of Csor.00g031690 vs. ExPASy TrEMBL
Match: A0A6J1E0I5 (protein IQ-DOMAIN 1-like OS=Cucurbita moschata OX=3662 GN=LOC111429725 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 9.21e-16
Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 0

Query: 31  LTLISATPDKAPASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVA--DRDFTGESR 87
           +   +ATP+K P SGG KKRLSF AS A  RRHSGPPK+D  PIKNVA  +RDFTGESR
Sbjct: 429 IEKTTATPEKEPVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR 487

BLAST of Csor.00g031690 vs. ExPASy TrEMBL
Match: A0A5D3C337 (Protein IQ-DOMAIN 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001970 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 8.23e-15
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 0

Query: 42  PASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVADRDFTGESR 87
           PAS G KKRLSFP SPANSRR SGPPK+D +PIKNV +R+FTGESR
Sbjct: 437 PASVGAKKRLSFPGSPANSRRQSGPPKIDASPIKNVGEREFTGESR 482

BLAST of Csor.00g031690 vs. ExPASy TrEMBL
Match: A0A1S3CJK9 (protein IQ-DOMAIN 1-like OS=Cucumis melo OX=3656 GN=LOC103501685 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 8.23e-15
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 0

Query: 42  PASGGVKKRLSFPASPANSRRHSGPPKVDTNPIKNVADRDFTGESR 87
           PAS G KKRLSFP SPANSRR SGPPK+D +PIKNV +R+FTGESR
Sbjct: 437 PASVGAKKRLSFPGSPANSRRQSGPPKIDASPIKNVGEREFTGESR 482

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6578744.12.79e-56100.00hypothetical protein SDJN03_23192, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022938919.11.49e-2598.11protein IQ-DOMAIN 1-like [Cucurbita moschata][more]
KAG7016273.11.49e-2598.11Protein IQ-DOMAIN 1 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022993423.17.02e-2494.23protein IQ-DOMAIN 1-like [Cucurbita maxima][more]
XP_023551502.15.12e-1986.79protein IQ-DOMAIN 1 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
A0A6J1FFI17.21e-2698.11protein IQ-DOMAIN 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444987 PE=4 SV=1[more]
A0A6J1K2633.40e-2494.23protein IQ-DOMAIN 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489440 PE=4 SV=1[more]
A0A6J1E0I59.21e-1667.80protein IQ-DOMAIN 1-like OS=Cucurbita moschata OX=3662 GN=LOC111429725 PE=4 SV=1[more]
A0A5D3C3378.23e-1578.26Protein IQ-DOMAIN 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3CJK98.23e-1578.26protein IQ-DOMAIN 1-like OS=Cucumis melo OX=3656 GN=LOC103501685 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g031690.m01Csor.00g031690.m01mRNA