![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Csor.00g030140 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGTCGTTCTCTTCCACCTTCTTACATTCTTTCTCAATCCCCAAATGCCCCATTTCTTCTTCTTCTTGTTCCTCACTGCCCACGTCCAGAGATTCTGCCGCTACTTCTCAACTTCCTACCGGAATTCGACTCCGGAGAGGCGGCGCCGATCGGGTTTTGGACTCGAAATCCATCGTCGTTTTGCTCGGCACTGGTTTCACTCTCTCCCTTCTGGGACCTGCATTGCCTTCTGCTGCGACGGAATTCCAGTCTTCGCTTCTGTTTAACGAGCCCCAAAATGCTCTGTCCTTGCCCACCTGGGCCGTACATGTTTCCATCGTCGTTGAATGGTGAGGATTTGTCAATCTGTTTTGTAATGATTTCTTGAAATGGAATTTGTTCGATGTTTTTTTTTTTTTTTTTTTCCCAGAAATTTCCCTAGTTATCATCTTCAACGTGCTTGTAAGAAGTGATAATCTCTCCAAATTCATGAGAAGTTCGACTAAATTTTAGAGAGAAGTGTAGGAATGTTGCTGAAAATTTTGTCCAAAATGCTTAGATGCTATGCTAAACGGTATGGTAGGGAGGGAGTCTCGTCTTGGTTAATTTAGGGAATGATCATGGGTTTATAAGTAAGGAATACATCTCTATTGGTACGAGGTGTTTTAGGGAAGTCCAAAGCAAAGTCAAGAGAGCTTATTCTCAAAGTGGACAATATTATATCATTGTGGAGAGTCGTGATTCCTAACATGGTATCAGAGTCATGCCCTTAACTTAACCATGTCAATAGAATCCTCAAGTGTCCAACAAAGACGTTGCTAGCCTCGAAGGTGTAGTCAAAAGTGATTCAGTGTCGAACAAACGATGTACTTTGTTTGAGTGCTCCAGAGAAAGGAGTCGAGTCTCAATTAAGGGGAGGTTGTTTGAGGGCTCCATAGGCCTCAGGGGAGGCTTGTAGTATACTTTGTTCAAAGGGAGGATTATTGAGGATTGTTGGGATGGAGTTCCACATTGGCTAATTTAGGGAATGATCATGAATTTATAAGCAAGGAATATATCTCTATTGATATGAGGCCTTTTAGGGAAGCTCAAATCCAAGCCACGAGAGCTTATGCTCAAAGTGATATCATACCATTGTGGAGAGTCGTGATTCCTACCAAACTGCACTAAACCTAAAAATTTATATGGATAGGTTAGAGTATATTCAATCTTTAATCTTTTAATTCACAAGTGTTCTTTAATTATTTCCATGGAAATAGACTCTGCATTTTAGTTACTCATTTGATGAATAAGAAATTAAAGGAAAAGGAAGAATGATAAACCAAGCAATTCATATGCTGCTGCTGGCTAGCTTGGTTCATAATTTGTTGATCACAAGTCTTGTGTCGTAAGGATTGCAGCAATGGCTTTGGTGTGGCAGTATGGAGAGAAATCTGGCAATGAGTCTTGGAAAGGACTTTCTTGGGGAATGGTAAGTTCTTTTTCTTTGTGTCTATAATTGCCTTTCATCTATCTTCTCCCATCCACTTATTTATGTAACTTGAGCAGGTACCCTTGCTAGGTGGAGCATTTTGTGCTTGCACATTGCATTTTTTCTACAATTCTGAGTCTCTTGAGGTATAGTAAGTTTCTGTTTTTGCAAGATCTTGCTTGGACGTAATGAAATGACTGATAGTGTTCGTATATTCTAAATAATGCGTACGAATTTTTAATCCAGTTCTTGATCATGATGATTTGTTAAAGTTCTTAGCTGATATAGTTTAGCTTCTTTCAATTATGCTCAGGATGGAATTTAGACCATTTCAGTGTAGTTTGATTAAACTCTTCAATTTAGTCCTAAAAGAAACCATTGATTAGGAAGCTTTGGCTCTCGACGTAATGGTATGAACACTGCCTGTTATTGATATTTTAAGGGTAATTATCAGTACCAAACCTTAACAAAACAGCCAAAAGATGCCCCCCTCGCTTACGCTGCACAAGTACCCTCTCTACCCCTTAGATACCGTCATTGCTTCTTTTCCGGGAAAAAAAGTTCACAACCCGTAGGCCTTCTACCTCCACGCGACATTGCTCTGTCAAGCTTTCGCTTGAGTCCTTGGTACTCATGACAAACTTTTCTTCCTAGCAAACTCTCCCCTGCAGCCACGTATACTCCCCGCCTCTATATCGCTTTGGAAATTCTTAATTGGGGGTCTATGACTATGTCCATCATCGTTTTTTTGGGTTTTCAATTCTATCTTTGAACTGTGATCATAAGGAGAATCAAACTTCTTGCTGCTTGTTTTGTTATCAATCAGGACTCTGAGTTCCTACTCCTATCTTGAAATTTTGTTACCGAGCAACTGTTTCTTCTATTTCGGTTTCATGTCCAGTCAAGTATTTGAACCGGCATGGAAGTCCTCAAATTATGAATTTCTCACGGTGCAGTTTGTTTAAAAAAAAAACTAAACTAAGAACACCTAGAAGAGGAAGTGCTCCCATTTTTATCTTCATTGCTTGAATTGCAGCATCAGATACATGTTTGCAAAGTATCCAAATTTGTTAGTATCTGCTGGATGGCATTAGTTTTGTGCATCAAATTTGACTTGTTCTTCATATTGTGCTCAATGATGGTGGGGAAGAATGCAAAAGAATTAGGGACGTTGATTTCTATTTGAGATGAATTGAAATTTTCTTGGTTTCGATTGAGTTGTTTTATTTTTTCTTAAATACCAATTATTTAGTATGATTCATGGTTATTGTTTCTGAAAATTAATAGATGTGAAGAAAACTTCCGATCATTTCCCTTCCTCTACTTTGCTTCACTCTGCCATAAGTTTCTTTCAAATTACTTCCAACATAACCATTTGTTGTGTAATCACGCAAGTATTTTCCGGATGTCACATATGATTGTGAACAGCTTGAGGAAGTAAAACTGATCCAAATTGATCTCTCTCTGGGTTTAGGTTGATAGTATTCCAATTATATTGGCTGAAGTTTCAAAAGAACAAGAACAACCTTACTGTGAAAACCAGATCTTTTTCTTACTCTCACTATAAGGATATAGACTACCTCAGTACCTCTTGTTAGGAACCACGAACCTTCACAATGGTATAATATTGTCCACTTTGAGCATAAGCTCTCGTGGCTTTACTTTTGGTTTCCCCAAAAGGCCTCATACCAATGGAGATGTATTCCTTACTTATAAACCCATGATCAACCCCTTAATTAGCCGATATGGGACTCCTCTCCCAACAATTCTCAACAATCCTCCTCTCGAATAAAGTACACCATAGAGCCTCCCCTGAGGCCTATGAAGCCCTCGAACAAAGTACACCTTTGTTCGACACTTAAGTCATTTTTTACTACATCTTTGAGGCTCACAACTTCTTTGTTCGACATCTGAGGATTCTATTGATATGGCTAAGTTAAGAGCATGACTCTGATACCATATTAGGAACCACAAACCTCCACAATGGTATGATATTGCCCACTTTGAACATAAGCTCTCATGGCTTTGCTTTTGGTTTTCCCAAAAGACCTCATACCAATGGAGATGTATTCCCTATAAACTCATGATCAACCCCTTAATTAGCCGATATGAGACTCCTCTCTCAACAATTCTCAACACCTCTCTCTCTCTTTAGAAGAAACTGAACCAAGCTTATCTCTGTTCTGGGTTTAGGTTGACTGGATTCAGATTCCATTGCTGTTGTTTCAAAAGAACAAGGCAGACTTACCATGAAAAGAATAAACAACCTCTCTTTCTCTTTCACTCTTCAATTTAATAAGTTCTTGTTTGTCAGAAATTTTGTTGTGGTAGTGCAGTTCTCACCTGAAAAGGATATAAAATGACTTGGATTTGGTGTTGAGTGCAGGTATTGGTGGCCCTTCAGGCAATGCTAACGGTTATAGGAAATGCTACAATGTGCATTGCTGCATTTCGCATATACAAATCATCACAAGAGCGTTCAAAGAACTTGTAA ATGATGTCGTTCTCTTCCACCTTCTTACATTCTTTCTCAATCCCCAAATGCCCCATTTCTTCTTCTTCTTGTTCCTCACTGCCCACGTCCAGAGATTCTGCCGCTACTTCTCAACTTCCTACCGGAATTCGACTCCGGAGAGGCGGCGCCGATCGGGTTTTGGACTCGAAATCCATCGTCGTTTTGCTCGGCACTGGTTTCACTCTCTCCCTTCTGGGACCTGCATTGCCTTCTGCTGCGACGGAATTCCAGTCTTCGCTTCTGTTTAACGAGCCCCAAAATGCTCTGTCCTTGCCCACCTGGGCCGTACATGTTTCCATCGTCGTTGAATGGATTGCAGCAATGGCTTTGGTGTGGCAGTATGGAGAGAAATCTGGCAATGAGTCTTGGAAAGGACTTTCTTGGGGAATGGTACCCTTGCTAGGTGGAGCATTTTGTGCTTGCACATTGCATTTTTTCTACAATTCTGAGTCTCTTGAGGTATTGGTGGCCCTTCAGGCAATGCTAACGGTTATAGGAAATGCTACAATGTGCATTGCTGCATTTCGCATATACAAATCATCACAAGAGCGTTCAAAGAACTTGTAA ATGATGTCGTTCTCTTCCACCTTCTTACATTCTTTCTCAATCCCCAAATGCCCCATTTCTTCTTCTTCTTGTTCCTCACTGCCCACGTCCAGAGATTCTGCCGCTACTTCTCAACTTCCTACCGGAATTCGACTCCGGAGAGGCGGCGCCGATCGGGTTTTGGACTCGAAATCCATCGTCGTTTTGCTCGGCACTGGTTTCACTCTCTCCCTTCTGGGACCTGCATTGCCTTCTGCTGCGACGGAATTCCAGTCTTCGCTTCTGTTTAACGAGCCCCAAAATGCTCTGTCCTTGCCCACCTGGGCCGTACATGTTTCCATCGTCGTTGAATGGATTGCAGCAATGGCTTTGGTGTGGCAGTATGGAGAGAAATCTGGCAATGAGTCTTGGAAAGGACTTTCTTGGGGAATGGTACCCTTGCTAGGTGGAGCATTTTGTGCTTGCACATTGCATTTTTTCTACAATTCTGAGTCTCTTGAGGTATTGGTGGCCCTTCAGGCAATGCTAACGGTTATAGGAAATGCTACAATGTGCATTGCTGCATTTCGCATATACAAATCATCACAAGAGCGTTCAAAGAACTTGTAA MMSFSSTFLHSFSIPKCPISSSSCSSLPTSRDSAATSQLPTGIRLRRGGADRVLDSKSIVVLLGTGFTLSLLGPALPSAATEFQSSLLFNEPQNALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKNL Homology
BLAST of Csor.00g030140 vs. ExPASy Swiss-Prot
Match: Q55720 (Ycf49-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll0608 PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 7.0e-27 Identity = 58/99 (58.59%), Postives = 73/99 (73.74%), Query Frame = 0
BLAST of Csor.00g030140 vs. ExPASy Swiss-Prot
Match: P15811 (Uncharacterized protein ycf49 OS=Cyanophora paradoxa OX=2762 GN=ycf49 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.3e-08 Identity = 36/101 (35.64%), Postives = 50/101 (49.50%), Query Frame = 0
BLAST of Csor.00g030140 vs. NCBI nr
Match: KAG6577584.1 (hypothetical protein SDJN03_25158, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 380 bits (977), Expect = 5.28e-133 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
BLAST of Csor.00g030140 vs. NCBI nr
Match: KAG7015633.1 (hypothetical protein SDJN02_23270, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 377 bits (967), Expect = 1.77e-131 Identity = 194/195 (99.49%), Postives = 194/195 (99.49%), Query Frame = 0
BLAST of Csor.00g030140 vs. NCBI nr
Match: XP_022923292.1 (uncharacterized protein LOC111431033 [Cucurbita moschata]) HSP 1 Score: 360 bits (924), Expect = 2.04e-124 Identity = 188/195 (96.41%), Postives = 190/195 (97.44%), Query Frame = 0
BLAST of Csor.00g030140 vs. NCBI nr
Match: XP_023551730.1 (uncharacterized protein LOC111809617 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 355 bits (912), Expect = 4.14e-123 Identity = 184/194 (94.85%), Postives = 186/194 (95.88%), Query Frame = 0
BLAST of Csor.00g030140 vs. NCBI nr
Match: XP_022965189.1 (uncharacterized protein LOC111465121 [Cucurbita maxima] >XP_022965190.1 uncharacterized protein LOC111465121 [Cucurbita maxima] >XP_022965191.1 uncharacterized protein LOC111465121 [Cucurbita maxima]) HSP 1 Score: 351 bits (901), Expect = 2.52e-121 Identity = 185/201 (92.04%), Postives = 187/201 (93.03%), Query Frame = 0
BLAST of Csor.00g030140 vs. ExPASy TrEMBL
Match: A0A6J1E5R7 (uncharacterized protein LOC111431033 OS=Cucurbita moschata OX=3662 GN=LOC111431033 PE=4 SV=1) HSP 1 Score: 360 bits (924), Expect = 9.88e-125 Identity = 188/195 (96.41%), Postives = 190/195 (97.44%), Query Frame = 0
BLAST of Csor.00g030140 vs. ExPASy TrEMBL
Match: A0A6J1HN17 (uncharacterized protein LOC111465121 OS=Cucurbita maxima OX=3661 GN=LOC111465121 PE=4 SV=1) HSP 1 Score: 351 bits (901), Expect = 1.22e-121 Identity = 185/201 (92.04%), Postives = 187/201 (93.03%), Query Frame = 0
BLAST of Csor.00g030140 vs. ExPASy TrEMBL
Match: A0A6J1DH09 (uncharacterized protein LOC111020415 OS=Momordica charantia OX=3673 GN=LOC111020415 PE=4 SV=1) HSP 1 Score: 293 bits (750), Expect = 1.11e-98 Identity = 159/199 (79.90%), Postives = 168/199 (84.42%), Query Frame = 0
BLAST of Csor.00g030140 vs. ExPASy TrEMBL
Match: A0A1S3BLS2 (ycf49-like protein OS=Cucumis melo OX=3656 GN=LOC103490947 PE=4 SV=1) HSP 1 Score: 288 bits (737), Expect = 7.03e-97 Identity = 151/194 (77.84%), Postives = 161/194 (82.99%), Query Frame = 0
BLAST of Csor.00g030140 vs. ExPASy TrEMBL
Match: A0A0A0L4G0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036550 PE=4 SV=1) HSP 1 Score: 285 bits (729), Expect = 1.16e-95 Identity = 150/194 (77.32%), Postives = 159/194 (81.96%), Query Frame = 0
BLAST of Csor.00g030140 vs. TAIR 10
Match: AT4G22830.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634). ) HSP 1 Score: 176.0 bits (445), Expect = 2.9e-44 Identity = 97/163 (59.51%), Postives = 111/163 (68.10%), Query Frame = 0
BLAST of Csor.00g030140 vs. TAIR 10
Match: AT4G22830.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634); Has 319 Blast hits to 317 proteins in 103 species: Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). ) HSP 1 Score: 172.2 bits (435), Expect = 4.2e-43 Identity = 106/191 (55.50%), Postives = 120/191 (62.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|