Csor.00g027980 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACTATTGCTTCTCTTGGGAGAACAAGAGCATGAGGTTAGGTTTGCTAACTGTAGTCCTATATATTTTGGAAGCTTAGATGATACCCATGTCATGGATTGCATATCTAGAAAATCTTTATGGCTTTCCCAGCTATCTTCAAAGCTTTCAAGTGAACTTTCAGACAGGAATGTTCAAAATTTTGGGGAGTATCTTCAAGTTGAATCATTTACACTGTCCATTTGCTCAAAGGAAAGTTGCCCTTACCGAACTACAAACAGAATTGAAAATGAATCTGCTGCAGCATTCTATTGCTGTAGTTGGCTAGTCGCAGACGAAGTCCTCGCATGGCAAATCATTTCCATCTTGGAGAAGCATGATCTCAGTTCAACATGA ATGAACTATTGCTTCTCTTGGGAGAACAAGAGCATGAGGTTAGGTTTGCTAACTCTATCTTCAAAGCTTTCAAGTGAACTTTCAGACAGGAATGTTCAAAATTTTGGGGAGTATCTTCAAGTTGAATCATTTACACTGTCCATTTGCTCAAAGGAAAGTTGCCCTTACCGAACTACAAACAGAATTGAAAATGAATCTGCTGCAGCATTCTATTGCTGTAGTTGGCTAGTCGCAGACGAAGTCCTCGCATGGCAAATCATTTCCATCTTGGAGAAGCATGATCTCAGTTCAACATGA ATGAACTATTGCTTCTCTTGGGAGAACAAGAGCATGAGGTTAGGTTTGCTAACTCTATCTTCAAAGCTTTCAAGTGAACTTTCAGACAGGAATGTTCAAAATTTTGGGGAGTATCTTCAAGTTGAATCATTTACACTGTCCATTTGCTCAAAGGAAAGTTGCCCTTACCGAACTACAAACAGAATTGAAAATGAATCTGCTGCAGCATTCTATTGCTGTAGTTGGCTAGTCGCAGACGAAGTCCTCGCATGGCAAATCATTTCCATCTTGGAGAAGCATGATCTCAGTTCAACATGA MNYCFSWENKSMRLGLLTLSSKLSSELSDRNVQNFGEYLQVESFTLSICSKESCPYRTTNRIENESAAAFYCCSWLVADEVLAWQIISILEKHDLSST Homology
BLAST of Csor.00g027980 vs. ExPASy Swiss-Prot
Match: Q8GUU3 (Cleavage and polyadenylation specificity factor subunit 3-II OS=Arabidopsis thaliana OX=3702 GN=CPSF73-II PE=1 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06 Identity = 26/73 (35.62%), Postives = 43/73 (58.90%), Query Frame = 0
BLAST of Csor.00g027980 vs. NCBI nr
Match: KAG6571197.1 (Cleavage and polyadenylation specificity factor subunit 3-II, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 203 bits (516), Expect = 7.47e-66 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
BLAST of Csor.00g027980 vs. NCBI nr
Match: XP_022944196.1 (cleavage and polyadenylation specificity factor subunit 3-II isoform X2 [Cucurbita moschata]) HSP 1 Score: 165 bits (418), Expect = 1.46e-45 Identity = 82/85 (96.47%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of Csor.00g027980 vs. NCBI nr
Match: KAG7011001.1 (Cleavage and polyadenylation specificity factor subunit 3-II [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 165 bits (418), Expect = 1.78e-45 Identity = 82/85 (96.47%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of Csor.00g027980 vs. NCBI nr
Match: XP_023513382.1 (cleavage and polyadenylation specificity factor subunit 3-II [Cucurbita pepo subsp. pepo]) HSP 1 Score: 165 bits (418), Expect = 1.91e-45 Identity = 82/85 (96.47%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of Csor.00g027980 vs. NCBI nr
Match: XP_022944195.1 (cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Cucurbita moschata]) HSP 1 Score: 165 bits (418), Expect = 1.91e-45 Identity = 82/85 (96.47%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of Csor.00g027980 vs. ExPASy TrEMBL
Match: A0A6J1FTR8 (cleavage and polyadenylation specificity factor subunit 3-II isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448716 PE=4 SV=1) HSP 1 Score: 165 bits (418), Expect = 7.06e-46 Identity = 82/85 (96.47%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of Csor.00g027980 vs. ExPASy TrEMBL
Match: A0A6J1FYI7 (cleavage and polyadenylation specificity factor subunit 3-II isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448716 PE=3 SV=1) HSP 1 Score: 165 bits (418), Expect = 9.27e-46 Identity = 82/85 (96.47%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of Csor.00g027980 vs. ExPASy TrEMBL
Match: A0A6J1JG52 (cleavage and polyadenylation specificity factor subunit 3-II isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484204 PE=4 SV=1) HSP 1 Score: 164 bits (414), Expect = 2.62e-45 Identity = 81/85 (95.29%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of Csor.00g027980 vs. ExPASy TrEMBL
Match: A0A6J1J7M0 (cleavage and polyadenylation specificity factor subunit 3-II isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484204 PE=3 SV=1) HSP 1 Score: 164 bits (414), Expect = 3.41e-45 Identity = 81/85 (95.29%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of Csor.00g027980 vs. ExPASy TrEMBL
Match: A0A5D3C3J3 (Cleavage and polyadenylation specificity factor subunit 3-II OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00090 PE=4 SV=1) HSP 1 Score: 142 bits (357), Expect = 1.21e-39 Identity = 71/86 (82.56%), Postives = 76/86 (88.37%), Query Frame = 0
BLAST of Csor.00g027980 vs. TAIR 10
Match: AT2G01730.1 (cleavage and polyadenylation specificity factor 73 kDa subunit-II ) HSP 1 Score: 53.9 bits (128), Expect = 8.4e-08 Identity = 26/73 (35.62%), Postives = 43/73 (58.90%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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