Csor.00g027920 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g027920
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr05: 6404333 .. 6404875 (+)
RNA-Seq ExpressionCsor.00g027920
SyntenyCsor.00g027920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGACTGTTGCTGGCAACCAAAGAAAGAAAGGGGCTGTGGCAACCAAAGAAAAGGGATGATAATTCCAGAACCATCTTTACCGTGCTGTTATGGGGGCTGTTGCTGGCAACCAAAGAAAGAAAATGGTTTGTAGCTGACAACCAAACAAAAGGGACGGTAATTCCAAAACTGAATATTCTCCATATTGCAATCTTTCCCATATTTAGCAGGTCTCTGTTATTGGGAACCATGTTGTTATCGAATAATAGTATCTTTACCCTACTGTTATGGAACTGTTGCTTATGGAAATGTTGCTGACAACCAAATTATATTGCATCCTAAAGTTGATCCTTATGCCAAAATGATACTTCCATTTTGGACTAAGTCTGCTATTCTTAAAAATATCTCTACCCTGCATGAGGCTGTTGCTGGCAACCAAATTATATTGCAACCTAAAGTTGATCCTTATGCCAAAAGGATACTTCTTTCTTGGGCCAAATTCTGTTGTTTTCAAGAATATCTTTACCATGTTGTTATGAGGGCTGTTGCAGACAACTAA

mRNA sequence

ATGGGAGACTGTTGCTGGCAACCAAAGAAAGAAAGGGGCTGTGGCAACCAAAGAAAAGGGATGATAATTCCAGAACCATCTTTACCGTGCTGTTATGGGGGCTGTTGCTGGCAACCAAAGAAAGAAAATGTATCTTTACCCTACTGTTATGGAACTGTTGCTTATGGAAATGTTGCTGACAACCAAATTATATTGCATCCTAAAGTTGATCCTTATGCCAAAATGATACTTCCATTTTGGACTAAGTCTGCTATTCTTAAAAATATCTCTACCCTGCATGAGGCTGTTGCTGGCAACCAAATTATATTGCAACCTAAAGTTGATCCTTATGCCAAAAGGATACTTCTTTCTTGGGCCAAATTCTGTTGTTTTCAAGAATATCTTTACCATGTTGTTATGAGGGCTGTTGCAGACAACTAA

Coding sequence (CDS)

ATGGGAGACTGTTGCTGGCAACCAAAGAAAGAAAGGGGCTGTGGCAACCAAAGAAAAGGGATGATAATTCCAGAACCATCTTTACCGTGCTGTTATGGGGGCTGTTGCTGGCAACCAAAGAAAGAAAATGTATCTTTACCCTACTGTTATGGAACTGTTGCTTATGGAAATGTTGCTGACAACCAAATTATATTGCATCCTAAAGTTGATCCTTATGCCAAAATGATACTTCCATTTTGGACTAAGTCTGCTATTCTTAAAAATATCTCTACCCTGCATGAGGCTGTTGCTGGCAACCAAATTATATTGCAACCTAAAGTTGATCCTTATGCCAAAAGGATACTTCTTTCTTGGGCCAAATTCTGTTGTTTTCAAGAATATCTTTACCATGTTGTTATGAGGGCTGTTGCAGACAACTAA

Protein sequence

MGDCCWQPKKERGCGNQRKGMIIPEPSLPCCYGGCCWQPKKENVSLPYCYGTVAYGNVADNQIILHPKVDPYAKMILPFWTKSAILKNISTLHEAVAGNQIILQPKVDPYAKRILLSWAKFCCFQEYLYHVVMRAVADN
Homology
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BLAST of Csor.00g027920 vs. NCBI nr
Match: KAG6599009.1 (hypothetical protein SDJN03_08787, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 310 bits (794), Expect = 6.06e-107
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0 

Query: 1   MGDCCWQPKKERGCGNQRKGMIIPEPSLPCCYGGCCWQPKKENVSLPYCYGTVAYGNVAD 60
           MGDCCWQPKKERGCGNQRKGMIIPEPSLPCCYGGCCWQPKKENVSLPYCYGTVAYGNVAD
Sbjct: 1   MGDCCWQPKKERGCGNQRKGMIIPEPSLPCCYGGCCWQPKKENVSLPYCYGTVAYGNVAD 60

Query: 61  NQIILHPKVDPYAKMILPFWTKSAILKNISTLHEAVAGNQIILQPKVDPYAKRILLSWAK 120
           NQIILHPKVDPYAKMILPFWTKSAILKNISTLHEAVAGNQIILQPKVDPYAKRILLSWAK
Sbjct: 61  NQIILHPKVDPYAKMILPFWTKSAILKNISTLHEAVAGNQIILQPKVDPYAKRILLSWAK 120

Query: 121 FCCFQEYLYHVVMRAVADN 139
           FCCFQEYLYHVVMRAVADN
Sbjct: 121 FCCFQEYLYHVVMRAVADN 139

The following BLAST results are available for this feature:
BLAST of Csor.00g027920 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g027920 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6599009.16.06e-107100.00hypothetical protein SDJN03_08787, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g027920 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g027920 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g027920.m01Csor.00g027920.m01mRNA