Csor.00g025080 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g025080
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	calmodulin-like
Location	Csor_Chr04: 4794998 .. 4795270 (+)
RNA-Seq Expression	Csor.00g025080
Synteny	Csor.00g025080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCGCAAAACCAAAATGTACCATCAGAGGCCCAAGATATCAAGACAGCAATTAAGGGTAATCTTCAGAAACCACGACCGAGATGGTGACGGCCGCCTGAGCTCCGCCGAGCTGACCAAAGCCTTCCACTACATCGGTGCCCTTCTGCCATCATTCAGAGCTTGCCACGCTCTTCTTTACACCGATTCTGACAGAGACGGATTCATCGATGAGAAGGATTTCGAACAGCTCATTGATTATGCCGAGAAACGCCAATACACCGTCATTTAA

mRNA sequence

ATGCCTCGCAAAACCAAAATGTACCATCAGAGGCCCAAGATATCAAGACAGCAATTAAGGGTAATCTTCAGAAACCACGACCGAGATGGTGACGGCCGCCTGAGCTCCGCCGAGCTGACCAAAGCCTTCCACTACATCGGTGCCCTTCTGCCATCATTCAGAGCTTGCCACGCTCTTCTTTACACCGATTCTGACAGAGACGGATTCATCGATGAGAAGGATTTCGAACAGCTCATTGATTATGCCGAGAAACGCCAATACACCGTCATTTAA

Coding sequence (CDS)

ATGCCTCGCAAAACCAAAATGTACCATCAGAGGCCCAAGATATCAAGACAGCAATTAAGGGTAATCTTCAGAAACCACGACCGAGATGGTGACGGCCGCCTGAGCTCCGCCGAGCTGACCAAAGCCTTCCACTACATCGGTGCCCTTCTGCCATCATTCAGAGCTTGCCACGCTCTTCTTTACACCGATTCTGACAGAGACGGATTCATCGATGAGAAGGATTTCGAACAGCTCATTGATTATGCCGAGAAACGCCAATACACCGTCATTTAA

Protein sequence

MPRKTKMYHQRPKISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQLIDYAEKRQYTVI

Homology

[Close]

BLAST of Csor.00g025080 vs. ExPASy Swiss-Prot
Match: Q9SRE6 (Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 7.7e-05
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 17  QQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFE 76
           ++L  +F   D + DGR+S  EL K+F  +G  L    A  A+  +D+D DG +D ++F 
Sbjct: 42  RELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFS 101

Query: 77  QLIDYAEKRQ 87
           QLI   ++ +
Sbjct: 102 QLIKVDDEEE 111

[Close]

BLAST of Csor.00g025080 vs. ExPASy Swiss-Prot
Match: Q0DJV6 (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 GN=CML18 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.0e-04
Identity = 22/58 (37.93%), Postives = 33/58 (56.90%), Query Frame = 0


Query: 18 QLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDF 76
          +L  +FR +D +GDG++S+ EL      +GA L        +   DSDRDGF+D  +F
Sbjct: 5  ELEQVFRRYDANGDGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFVDLSEF 62

[Close]

BLAST of Csor.00g025080 vs. ExPASy Swiss-Prot
Match: Q6L4D4 (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica OX=39947 GN=CML15 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.9e-04
Identity = 22/65 (33.85%), Postives = 32/65 (49.23%), Query Frame = 0


Query: 11  RPKISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALLYTDSDRDGFI 70
           RP  +  +   +FR  D +GDGR+S AEL   F  +G  +        +   DSD DG+I
Sbjct: 48  RPPAAEDETERVFRKFDANGDGRISRAELAALFRSVGHAVTDDEVARMMQEADSDGDGYI 107

Query: 71  DEKDF 76
              +F
Sbjct: 108 SLGEF 112

[Close]

BLAST of Csor.00g025080 vs. ExPASy Swiss-Prot
Match: Q8L3R2 (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 PE=2 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 2.9e-04
Identity = 23/65 (35.38%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 15  SRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALLYTDSDRDGFIDEKD 74
           S+++LR +F + D DGDG++S+ EL   F  +G  +    A  A+   D+D DG +  +D
Sbjct: 61  SKEELRQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFED 120

Query: 75  FEQLI 80
           F  L+
Sbjct: 121 FVGLM 125

[Close]

BLAST of Csor.00g025080 vs. ExPASy Swiss-Prot
Match: Q39419 (Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.9e-04
Identity = 24/67 (35.82%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 9  HQRPKISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALLYTDSDRDG 68
          H + K  R++   IF+  D +GDG++S+AEL +A   +G++ P     H +   D+D DG
Sbjct: 5  HPQDKAERER---IFKRFDANGDGKISAAELGEALKTLGSITPD-EVKHMMAEIDTDGDG 64

Query: 69 FIDEKDF 76
          FI  ++F
Sbjct: 65 FISFQEF 67

[Close]

BLAST of Csor.00g025080 vs. NCBI nr
Match: KAG6600743.1 (Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031384.1 Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184 bits (467), Expect = 1.25e-58
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MPRKTKMYHQRPKISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALL 60
          MPRKTKMYHQRPKISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALL
Sbjct: 1  MPRKTKMYHQRPKISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALL 60

Query: 61 YTDSDRDGFIDEKDFEQLIDYAEKRQYTVI 90
          YTDSDRDGFIDEKDFEQLIDYAEKRQYTVI
Sbjct: 61 YTDSDRDGFIDEKDFEQLIDYAEKRQYTVI 90

[Close]

BLAST of Csor.00g025080 vs. NCBI nr
Match: KAG6600744.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 170 bits (430), Expect = 5.54e-53
Identity = 82/90 (91.11%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MPRKTKMYHQRPKISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALL 60
          MPRKTK YH RP+ISR+QLR+IFRNHD +GDGRLSSAELT+AFHYIGALLPSFRACHALL
Sbjct: 1  MPRKTKTYHPRPRISREQLRLIFRNHDDNGDGRLSSAELTQAFHYIGALLPSFRACHALL 60

Query: 61 YTDSDRDGFIDEKDFEQLIDYAEKRQYTVI 90
          YTDSDRDGFIDEKDFEQLIDYAEKRQYTVI
Sbjct: 61 YTDSDRDGFIDEKDFEQLIDYAEKRQYTVI 90

[Close]

BLAST of Csor.00g025080 vs. NCBI nr
Match: KAG7024248.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 136 bits (343), Expect = 1.04e-39
Identity = 67/90 (74.44%), Postives = 76/90 (84.44%), Query Frame = 0


Query: 1  MPRKTKMYHQRPKISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALL 60
          M RK+K Y  RPK+SR+QL VIFRNHD DGDGRLS+ ELT AF YIGA LPS+RA HALL
Sbjct: 1  MARKSKTYQPRPKLSREQLSVIFRNHDGDGDGRLSTTELTAAFRYIGAFLPSYRALHALL 60

Query: 61 YTDSDRDGFIDEKDFEQLIDYAEKRQYTVI 90
          +TDSD DGFI EKDFE L++YAEKR+YTVI
Sbjct: 61 HTDSDGDGFIGEKDFELLVNYAEKRKYTVI 90

[Close]

BLAST of Csor.00g025080 vs. NCBI nr
Match: KAG6608481.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037808.1 putative calcium-binding protein CML41, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 135 bits (340), Expect = 2.97e-39
Identity = 65/90 (72.22%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 1  MPRKTKMYHQRPKISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALL 60
          M RK KM   RPK+SR+QL VIFRNHD DGDGRLS+ ELT+AF YIGA LPS+RA HAL 
Sbjct: 1  MARKNKMSQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHALR 60

Query: 61 YTDSDRDGFIDEKDFEQLIDYAEKRQYTVI 90
          YTDSDRDGFI EKDFE L++Y EKR YT++
Sbjct: 61 YTDSDRDGFIGEKDFESLVNYTEKRHYTIV 90

[Close]

BLAST of Csor.00g025080 vs. NCBI nr
Match: KAG6591370.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 133 bits (335), Expect = 1.67e-37
Identity = 65/88 (73.86%), Postives = 74/88 (84.09%), Query Frame = 0


Query: 1  MPRKTKMYHQRPKISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALL 60
          M RK+K Y  RPK+SR+QL VIFRNHD DGDGRLS+ ELT AF YIGA LPS+RA HALL
Sbjct: 1  MARKSKTYQPRPKLSREQLSVIFRNHDGDGDGRLSTTELTAAFRYIGAFLPSYRALHALL 60

Query: 61 YTDSDRDGFIDEKDFEQLIDYAEKRQYT 88
          +TDSD DGFI EKDFE L++YAEKR+YT
Sbjct: 61 HTDSDGDGFIGEKDFELLVNYAEKRKYT 88

[Close]

BLAST of Csor.00g025080 vs. ExPASy TrEMBL
Match: A0A0A0KZR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639730 PE=4 SV=1)

HSP 1 Score: 129 bits (325), Expect = 2.78e-37
Identity = 62/90 (68.89%), Postives = 76/90 (84.44%), Query Frame = 0


Query: 1  MPRKTKMYHQRPKISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALL 60
          M RK+K Y+ R K+SR+QL +IFRNHD D DGRLS+ ELT+AF YIGA LP++RA HALL
Sbjct: 1  MSRKSKNYYPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHALL 60

Query: 61 YTDSDRDGFIDEKDFEQLIDYAEKRQYTVI 90
          + DSDRDGFI EKDFE L++YAE+RQYT+I
Sbjct: 61 HADSDRDGFIGEKDFESLVNYAEQRQYTII 90

[Close]

BLAST of Csor.00g025080 vs. ExPASy TrEMBL
Match: A0A5A7VDB9 (Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003480 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 1.61e-36
Identity = 61/90 (67.78%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 1  MPRKTKMYHQRPKISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALL 60
          M R++K YH R ++SR+QL +IFRNHD D DGRLS+ ELT+AF YIGA LP +RA HAL 
Sbjct: 1  MSRRSKTYHPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHALF 60

Query: 61 YTDSDRDGFIDEKDFEQLIDYAEKRQYTVI 90
          + DSDRDGFI EKDFE L++YAE+RQYTVI
Sbjct: 61 HADSDRDGFISEKDFELLVNYAEQRQYTVI 90

[Close]

BLAST of Csor.00g025080 vs. ExPASy TrEMBL
Match: A0A5A7UYC0 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00250 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 9.70e-19
Identity = 34/74 (45.95%), Postives = 57/74 (77.03%), Query Frame = 0


Query: 14 ISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALLYTDSDRDGFIDEK 73
          +SR+ ++ IFR HD DGDGRLS +E+ KAF + G++LP ++A + + + D + DG+I+E+
Sbjct: 10 LSREDIKEIFREHDIDGDGRLSLSEMVKAFGFFGSILPFYKAHYGMAHADENGDGYIEEE 69

Query: 74 DFEQLIDYAEKRQY 87
          + ++L+DYAEK Q+
Sbjct: 70 ELDKLVDYAEKFQH 83

[Close]

BLAST of Csor.00g025080 vs. ExPASy TrEMBL
Match: A0A6J1KUW2 (calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.72e-18
Identity = 37/72 (51.39%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 13  KISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALLYTDSDRDGFIDE 72
           K+SR Q++ IF  HD DGDG LS +ELTKAF + G+++P ++A + L Y D+D DG I E
Sbjct: 84  KLSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSIIPLYKAHYGLAYADADGDGLISE 143

Query: 73  KDFEQLIDYAEK 84
           ++ E+L+DYAE+
Sbjct: 144 EELEKLVDYAER 155

[Close]

BLAST of Csor.00g025080 vs. ExPASy TrEMBL
Match: A0A6J1GK16 (calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454616 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.72e-18
Identity = 37/72 (51.39%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 13  KISRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALLYTDSDRDGFIDE 72
           K+SR Q++ IF  HD DGDG LS +ELTKAF + G+++P ++A + L Y D+D DG I E
Sbjct: 84  KLSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSIIPLYKAHYGLAYADADGDGLISE 143

Query: 73  KDFEQLIDYAEK 84
           ++ E+L+DYAE+
Sbjct: 144 EELEKLVDYAER 155

[Close]

BLAST of Csor.00g025080 vs. TAIR 10
Match: AT1G76650.1 (calmodulin-like 38 )

HSP 1 Score: 47.8 bits (112), Expect = 5.5e-06
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 17  QQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFE 76
           ++L  +F   D + DGR+S  EL K+F  +G  L    A  A+  +D+D DG +D ++F 
Sbjct: 42  RELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFS 101

Query: 77  QLIDYAEKRQ 87
           QLI   ++ +
Sbjct: 102 QLIKVDDEEE 111

[Close]

BLAST of Csor.00g025080 vs. TAIR 10
Match: AT1G76650.3 (calmodulin-like 38 )

HSP 1 Score: 47.8 bits (112), Expect = 5.5e-06
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 17  QQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFE 76
           ++L  +F   D + DGR+S  EL K+F  +G  L    A  A+  +D+D DG +D ++F 
Sbjct: 42  RELEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFS 101

Query: 77  QLIDYAEKRQ 87
           QLI   ++ +
Sbjct: 102 QLIKVDDEEE 111

[Close]

BLAST of Csor.00g025080 vs. TAIR 10
Match: AT3G50770.1 (calmodulin-like 41 )

HSP 1 Score: 45.8 bits (107), Expect = 2.1e-05
Identity = 23/65 (35.38%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 15  SRQQLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALLYTDSDRDGFIDEKD 74
           S+++LR +F + D DGDG++S+ EL   F  +G  +    A  A+   D+D DG +  +D
Sbjct: 61  SKEELRQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFED 120

Query: 75  FEQLI 80
           F  L+
Sbjct: 121 FVGLM 125

[Close]

BLAST of Csor.00g025080 vs. TAIR 10
Match: AT3G03000.1 (EF hand calcium-binding protein family )

HSP 1 Score: 45.4 bits (106), Expect = 2.7e-05
Identity = 25/65 (38.46%), Postives = 36/65 (55.38%), Query Frame = 0


Query: 18  QLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQ 77
           QL+ IFR  DRDG+G +++AEL  +   +G  L +      +   D D DG ID ++F Q
Sbjct: 94  QLKAIFRMFDRDGNGYITAAELAHSMAKLGHALTAEELTGMIKEADRDGDGCIDFQEFVQ 153

Query: 78  LIDYA 83
            I  A
Sbjct: 154 AITSA 158

[Close]

BLAST of Csor.00g025080 vs. TAIR 10
Match: AT4G03290.1 (EF hand calcium-binding protein family )

HSP 1 Score: 44.3 bits (103), Expect = 6.1e-05
Identity = 18/61 (29.51%), Postives = 37/61 (60.66%), Query Frame = 0


Query: 18 QLRVIFRNHDRDGDGRLSSAELTKAFHYIGALLPSFRACHALLYTDSDRDGFIDEKDFEQ 77
          +L  +F+  D+DGDG++++ EL ++F  +G ++P       +   D + DG +D ++F +
Sbjct: 5  ELNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIEEFGE 64

Query: 78 L 79
          L
Sbjct: 65 L 65

The following BLAST results are available for this feature:

BLAST of Csor.00g025080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRE6	7.7e-05	34.29	Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1	[more]
Q0DJV6	1.0e-04	37.93	Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q6L4D4	2.9e-04	33.85	Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q8L3R2	2.9e-04	35.38	Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 ...	[more]
Q39419	2.9e-04	35.82	Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1	[more]

BLAST of Csor.00g025080 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600743.1	1.25e-58	100.00	Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
KAG6600744.1	5.54e-53	91.11	Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7024248.1	1.04e-39	74.44	Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6608481.1	2.97e-39	72.22	Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037808.1...	[more]
KAG6591370.1	1.67e-37	73.86	Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Csor.00g025080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZR6	2.78e-37	68.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639730 PE=4 SV=1	[more]
A0A5A7VDB9	1.61e-36	67.78	Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7UYC0	9.70e-19	45.95	Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1KUW2	1.72e-18	51.39	calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1	[more]
A0A6J1GK16	1.72e-18	51.39	calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454616 PE=4 SV=1	[more]

BLAST of Csor.00g025080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76650.1	5.5e-06	34.29	calmodulin-like 38	[more]
AT1G76650.3	5.5e-06	34.29	calmodulin-like 38	[more]
AT3G50770.1	2.1e-05	35.38	calmodulin-like 41	[more]
AT3G03000.1	2.7e-05	38.46	EF hand calcium-binding protein family	[more]
AT4G03290.1	6.1e-05	29.51	EF hand calcium-binding protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13405	EF-hand_6	coord: 19..44 e-value: 9.8E-6 score: 25.0
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 14..49 score: 13.397589
None	No IPR available	GENE3D	1.10.238.10		coord: 2..89 e-value: 1.4E-11 score: 46.2
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 13..84
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 13..84
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 63..75
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 27..39
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 6..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g025080.m01	Csor.00g025080.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding