
Csor.00g024590 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTCATCCCACATTTTGGAGGAAGAGAAAGAAGAGATAGATTCGGATGATGAATTTTTTCAAGACGGTTACCATACTATCACTAAAAAGGAAGAGATGGAATATTATTGTGCGGTCGAAGAATCCCAGGTTTATTTTCCCTTGATTTTTCCCTGTTCAAACTCTTTTTTTTTTTAAATAAATGGGAGGATATGCAGGGTTTTGATGTACCAGATTTTGGTAACGTCTATGCATTTAGTCTCATCACTCCAATGAAATTGCATGAGGTCCCGGGGATGCTTAAAGAGGTTCAAATCTCAGCAAATGAAGCTATCAAACATTACAACAACGAAAATGTAATCGTTCTAACTTGCTGTCCATTTTGTGTTTTTTTATTGTATTCTTTTATCCTGTGAAAAAGAATATGTTCATTCATCTTCTATAAATGTTTCTTTTATCTTGTATGGATAGGGAACTAATTTTGAAGTTGTAGACATTGTGAAGGCTAATCATTCGGGGTGTTGTGGCTCAATGTATGACATCACATTTAATGTGAAGCCAATTGGAACTTCGGTAGAATTTCCCCCGATAACCTTCCAAGCTAAAGTTTATTACGCTATTCCTATAAAAGATATTATAGACGTTGAACTTTGCAGGCCAAAGCCCTCTAATTAA ATGGCTTCTTCATCCCACATTTTGGAGGAAGAGAAAGAAGAGATAGATTCGGATGATGAATTTTTTCAAGACGGTTACCATACTATCACTAAAAAGGAAGAGATGGAATATTATTGTGCGGTCGAAGAATCCCAGGGTTTTGATGTACCAGATTTTGGTAACGTCTATGCATTTAGTCTCATCACTCCAATGAAATTGCATGAGGTCCCGGGGATGCTTAAAGAGGTTCAAATCTCAGCAAATGAAGCTATCAAACATTACAACAACGAAAATGGAACTAATTTTGAAGTTGTAGACATTGTGAAGGCTAATCATTCGGGGTGTTGTGGCTCAATGTATGACATCACATTTAATGTGAAGCCAATTGGAACTTCGGTAGAATTTCCCCCGATAACCTTCCAAGCTAAAGTTTATTACGCTATTCCTATAAAAGATATTATAGACGTTGAACTTTGCAGGCCAAAGCCCTCTAATTAA ATGGCTTCTTCATCCCACATTTTGGAGGAAGAGAAAGAAGAGATAGATTCGGATGATGAATTTTTTCAAGACGGTTACCATACTATCACTAAAAAGGAAGAGATGGAATATTATTGTGCGGTCGAAGAATCCCAGGGTTTTGATGTACCAGATTTTGGTAACGTCTATGCATTTAGTCTCATCACTCCAATGAAATTGCATGAGGTCCCGGGGATGCTTAAAGAGGTTCAAATCTCAGCAAATGAAGCTATCAAACATTACAACAACGAAAATGGAACTAATTTTGAAGTTGTAGACATTGTGAAGGCTAATCATTCGGGGTGTTGTGGCTCAATGTATGACATCACATTTAATGTGAAGCCAATTGGAACTTCGGTAGAATTTCCCCCGATAACCTTCCAAGCTAAAGTTTATTACGCTATTCCTATAAAAGATATTATAGACGTTGAACTTTGCAGGCCAAAGCCCTCTAATTAA MASSSHILEEEKEEIDSDDEFFQDGYHTITKKEEMEYYCAVEESQGFDVPDFGNVYAFSLITPMKLHEVPGMLKEVQISANEAIKHYNNENGTNFEVVDIVKANHSGCCGSMYDITFNVKPIGTSVEFPPITFQAKVYYAIPIKDIIDVELCRPKPSN Homology
BLAST of Csor.00g024590 vs. NCBI nr
Match: KAG6600694.1 (hypothetical protein SDJN03_05927, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 326 bits (835), Expect = 1.43e-112 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
BLAST of Csor.00g024590 vs. NCBI nr
Match: XP_022942206.1 (uncharacterized protein LOC111447330 [Cucurbita moschata] >XP_022942207.1 uncharacterized protein LOC111447330 [Cucurbita moschata]) HSP 1 Score: 314 bits (804), Expect = 8.18e-108 Identity = 153/158 (96.84%), Postives = 154/158 (97.47%), Query Frame = 0
BLAST of Csor.00g024590 vs. NCBI nr
Match: XP_023548353.1 (UPF0725 protein At1g02770-like [Cucurbita pepo subsp. pepo] >XP_023548361.1 UPF0725 protein At1g02770-like [Cucurbita pepo subsp. pepo] >XP_023548367.1 UPF0725 protein At1g02770-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 311 bits (798), Expect = 6.28e-107 Identity = 151/158 (95.57%), Postives = 153/158 (96.84%), Query Frame = 0
BLAST of Csor.00g024590 vs. NCBI nr
Match: XP_022975599.1 (uncharacterized protein LOC111475178 [Cucurbita maxima]) HSP 1 Score: 291 bits (746), Expect = 5.34e-99 Identity = 142/158 (89.87%), Postives = 147/158 (93.04%), Query Frame = 0
BLAST of Csor.00g024590 vs. NCBI nr
Match: XP_022975633.1 (uncharacterized protein LOC111475320 [Cucurbita maxima]) HSP 1 Score: 291 bits (744), Expect = 1.08e-98 Identity = 142/158 (89.87%), Postives = 146/158 (92.41%), Query Frame = 0
BLAST of Csor.00g024590 vs. ExPASy TrEMBL
Match: A0A6J1FN74 (uncharacterized protein LOC111447330 OS=Cucurbita moschata OX=3662 GN=LOC111447330 PE=4 SV=1) HSP 1 Score: 314 bits (804), Expect = 3.96e-108 Identity = 153/158 (96.84%), Postives = 154/158 (97.47%), Query Frame = 0
BLAST of Csor.00g024590 vs. ExPASy TrEMBL
Match: A0A6J1IL21 (uncharacterized protein LOC111475178 OS=Cucurbita maxima OX=3661 GN=LOC111475178 PE=4 SV=1) HSP 1 Score: 291 bits (746), Expect = 2.59e-99 Identity = 142/158 (89.87%), Postives = 147/158 (93.04%), Query Frame = 0
BLAST of Csor.00g024590 vs. ExPASy TrEMBL
Match: A0A6J1IJT3 (uncharacterized protein LOC111475320 OS=Cucurbita maxima OX=3661 GN=LOC111475320 PE=4 SV=1) HSP 1 Score: 291 bits (744), Expect = 5.22e-99 Identity = 142/158 (89.87%), Postives = 146/158 (92.41%), Query Frame = 0
BLAST of Csor.00g024590 vs. ExPASy TrEMBL
Match: A0A6J1FPD6 (UPF0725 protein At4g29550-like OS=Cucurbita moschata OX=3662 GN=LOC111447608 PE=4 SV=1) HSP 1 Score: 259 bits (662), Expect = 2.24e-86 Identity = 126/158 (79.75%), Postives = 141/158 (89.24%), Query Frame = 0
BLAST of Csor.00g024590 vs. ExPASy TrEMBL
Match: A0A6J1FVU0 (uncharacterized protein LOC111447329 OS=Cucurbita moschata OX=3662 GN=LOC111447329 PE=4 SV=1) HSP 1 Score: 258 bits (658), Expect = 6.65e-85 Identity = 125/158 (79.11%), Postives = 139/158 (87.97%), Query Frame = 0
BLAST of Csor.00g024590 vs. TAIR 10
Match: AT1G63205.1 (Cystatin/monellin superfamily protein ) HSP 1 Score: 59.3 bits (142), Expect = 3.2e-09 Identity = 48/157 (30.57%), Postives = 76/157 (48.41%), Query Frame = 0
BLAST of Csor.00g024590 vs. TAIR 10
Match: AT1G63190.1 (Cystatin/monellin superfamily protein ) HSP 1 Score: 53.5 bits (127), Expect = 1.8e-07 Identity = 45/157 (28.66%), Postives = 73/157 (46.50%), Query Frame = 0
BLAST of Csor.00g024590 vs. TAIR 10
Match: AT2G37435.1 (Cystatin/monellin superfamily protein ) HSP 1 Score: 50.4 bits (119), Expect = 1.5e-06 Identity = 43/149 (28.86%), Postives = 71/149 (47.65%), Query Frame = 0
BLAST of Csor.00g024590 vs. TAIR 10
Match: AT1G63200.1 (Cystatin/monellin superfamily protein ) HSP 1 Score: 50.1 bits (118), Expect = 1.9e-06 Identity = 49/160 (30.63%), Postives = 70/160 (43.75%), Query Frame = 0
BLAST of Csor.00g024590 vs. TAIR 10
Match: AT1G63206.1 (Cystatin/monellin superfamily protein ) HSP 1 Score: 49.3 bits (116), Expect = 3.3e-06 Identity = 41/130 (31.54%), Postives = 65/130 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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