Csor.00g024350 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g024350
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Unknown protein
Location	Csor_Chr04: 4383498 .. 4384082 (+)
RNA-Seq Expression	Csor.00g024350
Synteny	Csor.00g024350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCAGTCCACCATCGCCGCCTGGCTGAACAATTACAACAACCTCAAGTCTAATCCCGAAGCCCTAGATTCCACCGACATGCTCCTCGAATTTCCCTACAAGCCGGGCGTTGACCTAATTCGGAATTGCGATCTCCCGCCGCCGCAGAAGTTATTCACGGCCTCCGACAAGGGGGCGATGGCGGGTAGAGGTAGAGGTCGGGAAGAAGTGGAAACAGGGGGGATGGAGGAGAAATTGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAGGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTATAAGTAGGGCTTTTGAAGATGAGGCGAGATTGATCTTCTGTTACCGACAGTCGCTGAAATTGATGGAGCTCAGAGTTTCCAAGTTGAAGAAGAGGAAAGAAGAAGAAGAAGACAATGGCAATGGCAATGGCAATGGCAATCGAGGAGTGAAATGGGTTTGGGCTTTGGCAATCTGCTTGAGTGTTGTGGGAGTCGGCATTCTCTTGGGCTATACTTGTAGTAATGTTGATGAAGACCCATTTGTTGTCAACACCTGA

mRNA sequence

ATGAAGCAGTCCACCATCGCCGCCTGGCTGAACAATTACAACAACCTCAAGTCTAATCCCGAAGCCCTAGATTCCACCGACATGCTCCTCGAATTTCCCTACAAGCCGGGCGTTGACCTAATTCGGAATTGCGATCTCCCGCCGCCGCAGAAGTTATTCACGGCCTCCGACAAGGGGGCGATGGCGGGTAGAGGTAGAGGTCGGGAAGAAGTGGAAACAGGGGGGATGGAGGAGAAATTGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAGGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTATAAGTAGGGCTTTTGAAGATGAGGCGAGATTGATCTTCTGTTACCGACAGTCGCTGAAATTGATGGAGCTCAGAGTTTCCAAGTTGAAGAAGAGGAAAGAAGAAGAAGAAGACAATGGCAATGGCAATGGCAATGGCAATCGAGGAGTGAAATGGGTTTGGGCTTTGGCAATCTGCTTGAGTGTTGTGGGAGTCGGCATTCTCTTGGGCTATACTTGTAGTAATGTTGATGAAGACCCATTTGTTGTCAACACCTGA

Coding sequence (CDS)

ATGAAGCAGTCCACCATCGCCGCCTGGCTGAACAATTACAACAACCTCAAGTCTAATCCCGAAGCCCTAGATTCCACCGACATGCTCCTCGAATTTCCCTACAAGCCGGGCGTTGACCTAATTCGGAATTGCGATCTCCCGCCGCCGCAGAAGTTATTCACGGCCTCCGACAAGGGGGCGATGGCGGGTAGAGGTAGAGGTCGGGAAGAAGTGGAAACAGGGGGGATGGAGGAGAAATTGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAGGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTATAAGTAGGGCTTTTGAAGATGAGGCGAGATTGATCTTCTGTTACCGACAGTCGCTGAAATTGATGGAGCTCAGAGTTTCCAAGTTGAAGAAGAGGAAAGAAGAAGAAGAAGACAATGGCAATGGCAATGGCAATGGCAATCGAGGAGTGAAATGGGTTTGGGCTTTGGCAATCTGCTTGAGTGTTGTGGGAGTCGGCATTCTCTTGGGCTATACTTGTAGTAATGTTGATGAAGACCCATTTGTTGTCAACACCTGA

Protein sequence

MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGAMAGRGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNGNGNRGVKWVWALAICLSVVGVGILLGYTCSNVDEDPFVVNT

Homology

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BLAST of Csor.00g024350 vs. NCBI nr
Match: KAG6600670.1 (hypothetical protein SDJN03_05903, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 381 bits (978), Expect = 3.44e-133
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 60
           MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA
Sbjct: 1   MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 60

Query: 61  MAGRGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120
           MAGRGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL
Sbjct: 61  MAGRGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120

Query: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNGNGNRGVKWVWALAICLSVVGVGILLGY 180
           IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNGNGNRGVKWVWALAICLSVVGVGILLGY
Sbjct: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNGNGNRGVKWVWALAICLSVVGVGILLGY 180

Query: 181 TCSNVDEDPFVVNT 194
           TCSNVDEDPFVVNT
Sbjct: 181 TCSNVDEDPFVVNT 194

[Close]

BLAST of Csor.00g024350 vs. NCBI nr
Match: KAG7031309.1 (hypothetical protein SDJN02_05349, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365 bits (937), Expect = 5.33e-127
Identity = 189/194 (97.42%), Postives = 189/194 (97.42%), Query Frame = 0


Query: 1   MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 60
           MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA
Sbjct: 1   MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 60

Query: 61  MAGRGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120
           MAGRGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL
Sbjct: 61  MAGRGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120

Query: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNGNGNRGVKWVWALAICLSVVGVGILLGY 180
           IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGN    RGVKWVWALAICLSVVGVGILLGY
Sbjct: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGN----RGVKWVWALAICLSVVGVGILLGY 180

Query: 181 TCSNVDEDPFVVNT 194
           TCSN DEDPFVVNT
Sbjct: 181 TCSNADEDPFVVNT 190

[Close]

BLAST of Csor.00g024350 vs. NCBI nr
Match: XP_022970087.1 (uncharacterized protein LOC111469054 [Cucurbita maxima])

HSP 1 Score: 361 bits (926), Expect = 1.16e-124
Identity = 187/194 (96.39%), Postives = 187/194 (96.39%), Query Frame = 0


Query: 1   MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 60
           MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA
Sbjct: 43  MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 102

Query: 61  MAGRGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120
           MA RGRGREEVE GGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL
Sbjct: 103 MAARGRGREEVEAGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 162

Query: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNGNGNRGVKWVWALAICLSVVGVGILLGY 180
           IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNG G   VKWVWALAICLSVVGVGILLGY
Sbjct: 163 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNGGG---VKWVWALAICLSVVGVGILLGY 222

Query: 181 TCSNVDEDPFVVNT 194
            CSNVDEDPFVVNT
Sbjct: 223 ACSNVDEDPFVVNT 233

[Close]

BLAST of Csor.00g024350 vs. NCBI nr
Match: XP_022943244.1 (uncharacterized protein LOC111448032 [Cucurbita moschata])

HSP 1 Score: 357 bits (915), Expect = 1.20e-123
Identity = 186/194 (95.88%), Postives = 186/194 (95.88%), Query Frame = 0


Query: 1   MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 60
           MKQSTIA WLNNYNNLKSNPEALDSTDMLLEFPYKP VDLIRNCDLPPPQKLFTASDKGA
Sbjct: 1   MKQSTIAGWLNNYNNLKSNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGA 60

Query: 61  MAGRGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120
           MA RGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL
Sbjct: 61  MAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120

Query: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNGNGNRGVKWVWALAICLSVVGVGILLGY 180
           IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGN    RGVKWVWALAICLSVVGVGILLGY
Sbjct: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGN----RGVKWVWALAICLSVVGVGILLGY 180

Query: 181 TCSNVDEDPFVVNT 194
           TCSNV EDPFVVNT
Sbjct: 181 TCSNVGEDPFVVNT 190

[Close]

BLAST of Csor.00g024350 vs. NCBI nr
Match: XP_023545135.1 (uncharacterized protein LOC111804522 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262 bits (670), Expect = 6.11e-87
Identity = 146/194 (75.26%), Postives = 147/194 (75.77%), Query Frame = 0


Query: 1   MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 60
           MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA
Sbjct: 1   MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 60

Query: 61  MAGRGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120
           MA RGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL
Sbjct: 61  MAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120

Query: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNGNGNRGVKWVWALAICLSVVGVGILLGY 180
           IFCYRQSLKLMELRVS                                            
Sbjct: 121 IFCYRQSLKLMELRVS-------------------------------------------- 148

Query: 181 TCSNVDEDPFVVNT 194
             +NVDEDPFVVNT
Sbjct: 181 --NNVDEDPFVVNT 148

[Close]

BLAST of Csor.00g024350 vs. ExPASy TrEMBL
Match: A0A6J1HY55 (uncharacterized protein LOC111469054 OS=Cucurbita maxima OX=3661 GN=LOC111469054 PE=4 SV=1)

HSP 1 Score: 361 bits (926), Expect = 5.61e-125
Identity = 187/194 (96.39%), Postives = 187/194 (96.39%), Query Frame = 0


Query: 1   MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 60
           MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA
Sbjct: 43  MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 102

Query: 61  MAGRGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120
           MA RGRGREEVE GGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL
Sbjct: 103 MAARGRGREEVEAGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 162

Query: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNGNGNRGVKWVWALAICLSVVGVGILLGY 180
           IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNG G   VKWVWALAICLSVVGVGILLGY
Sbjct: 163 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNGGG---VKWVWALAICLSVVGVGILLGY 222

Query: 181 TCSNVDEDPFVVNT 194
            CSNVDEDPFVVNT
Sbjct: 223 ACSNVDEDPFVVNT 233

[Close]

BLAST of Csor.00g024350 vs. ExPASy TrEMBL
Match: A0A6J1FTQ9 (uncharacterized protein LOC111448032 OS=Cucurbita moschata OX=3662 GN=LOC111448032 PE=4 SV=1)

HSP 1 Score: 357 bits (915), Expect = 5.83e-124
Identity = 186/194 (95.88%), Postives = 186/194 (95.88%), Query Frame = 0


Query: 1   MKQSTIAAWLNNYNNLKSNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGA 60
           MKQSTIA WLNNYNNLKSNPEALDSTDMLLEFPYKP VDLIRNCDLPPPQKLFTASDKGA
Sbjct: 1   MKQSTIAGWLNNYNNLKSNPEALDSTDMLLEFPYKPCVDLIRNCDLPPPQKLFTASDKGA 60

Query: 61  MAGRGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120
           MA RGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL
Sbjct: 61  MAARGRGREEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL 120

Query: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGNGNGNRGVKWVWALAICLSVVGVGILLGY 180
           IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGN    RGVKWVWALAICLSVVGVGILLGY
Sbjct: 121 IFCYRQSLKLMELRVSKLKKRKEEEEDNGNGN----RGVKWVWALAICLSVVGVGILLGY 180

Query: 181 TCSNVDEDPFVVNT 194
           TCSNV EDPFVVNT
Sbjct: 181 TCSNVGEDPFVVNT 190

[Close]

BLAST of Csor.00g024350 vs. ExPASy TrEMBL
Match: A0A6J1C873 (uncharacterized protein LOC111008325 OS=Momordica charantia OX=3673 GN=LOC111008325 PE=4 SV=1)

HSP 1 Score: 228 bits (580), Expect = 4.77e-73
Identity = 126/182 (69.23%), Postives = 143/182 (78.57%), Query Frame = 0


Query: 19  NPEALDSTDMLL---EFPYKPGVDLIRNCDLPPPQKLFTASDKGAMAGRGRGREEVETGG 78
           NP+A+DS DMLL   EF +KPGVDLIRNCDLPPPQK+FT    G    + R R+E E+GG
Sbjct: 2   NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGG 61

Query: 79  MEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRV 138
           +EEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIF YRQS+KL++LR+
Sbjct: 62  VEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRL 121

Query: 139 SKLKKRKEEEEDNGNGN--------GNGNRGVKWVWALAICLSVVGVGILLGYTCSNVDE 189
           S L+K  +EEE   NG+        G G   +KWVWALAIC +VVGVG L GYTC NVDE
Sbjct: 122 SNLQKMHDEEESRRNGDSDAPAAGGGGGGEAMKWVWALAICFTVVGVGFLYGYTC-NVDE 178

[Close]

BLAST of Csor.00g024350 vs. ExPASy TrEMBL
Match: A0A5D3BEN7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00050 PE=4 SV=1)

HSP 1 Score: 196 bits (498), Expect = 5.71e-61
Identity = 111/171 (64.91%), Postives = 128/171 (74.85%), Query Frame = 0


Query: 18  SNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGAMAGRGRGREEVETGGME 77
           +N ++LDS DM+     + GV+LIRNCDLPPPQK+F +                   GME
Sbjct: 7   NNRQSLDSRDMV----QRDGVELIRNCDLPPPQKVFKS-------------------GME 66

Query: 78  EKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRVSK 137
           EK+ELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL+FCYRQSLKL+ELRV K
Sbjct: 67  EKIELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLELRVCK 126

Query: 138 LKKRK-----EEEEDNGNGNGNGNRGVKWVWALAICLSVVGVGILLGYTCS 183
           L+K++     EEEE+       GN G+KWVWALAICLSVVGVG LLGYTC+
Sbjct: 127 LQKQEVEEVEEEEEEEERDENGGNGGMKWVWALAICLSVVGVGFLLGYTCN 154

[Close]

BLAST of Csor.00g024350 vs. ExPASy TrEMBL
Match: A0A1S3C2P7 (uncharacterized protein LOC103495794 OS=Cucumis melo OX=3656 GN=LOC103495794 PE=4 SV=1)

HSP 1 Score: 196 bits (498), Expect = 5.71e-61
Identity = 111/171 (64.91%), Postives = 128/171 (74.85%), Query Frame = 0


Query: 18  SNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGAMAGRGRGREEVETGGME 77
           +N ++LDS DM+     + GV+LIRNCDLPPPQK+F +                   GME
Sbjct: 7   NNRQSLDSRDMV----QRDGVELIRNCDLPPPQKVFKS-------------------GME 66

Query: 78  EKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRVSK 137
           EK+ELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL+FCYRQSLKL+ELRV K
Sbjct: 67  EKIELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLELRVCK 126

Query: 138 LKKRK-----EEEEDNGNGNGNGNRGVKWVWALAICLSVVGVGILLGYTCS 183
           L+K++     EEEE+       GN G+KWVWALAICLSVVGVG LLGYTC+
Sbjct: 127 LQKQEVEEVEEEEEEEERDENGGNGGMKWVWALAICLSVVGVGFLLGYTCN 154

[Close]

BLAST of Csor.00g024350 vs. TAIR 10
Match: AT1G01240.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 5.0e-12
Identity = 59/185 (31.89%), Postives = 87/185 (47.03%), Query Frame = 0


Query: 41  IRNCDLPPPQKLF-----TASDKGAMAG----------RGRGREEVETGGMEE------- 100
           I+NCDLPPPQKL      ++ +KG              + R    +   G  E       
Sbjct: 141 IQNCDLPPPQKLHKSIHSSSGEKGFKTAVKSPWKQGVWKDRFERSLSYNGSTESKNTSPM 200

Query: 101 ---------KLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLK 160
                    K +LL+ALR SQTRAREAER A +   E+D +      +A  +  Y+Q LK
Sbjct: 201 SSPRSDDLSKGQLLEALRHSQTRAREAERAAREACAEKDRVITILLKQASQMLAYKQWLK 260

Query: 161 LMELRVSKLKKRKEEEED-------------NGNGNGNGNRGVKWVWALAICLSVVGVGI 182
           L+E+    L+ +KEEE++              G     G  G +++ A A+  S++G G+
Sbjct: 261 LLEMEALYLQMKKEEEQEEQVKGMNLKKRKQRGEKKKKGETG-RYMMAFALGFSLIGAGL 320

[Close]

BLAST of Csor.00g024350 vs. TAIR 10
Match: AT1G01240.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 5.0e-12
Identity = 59/185 (31.89%), Postives = 87/185 (47.03%), Query Frame = 0


Query: 41  IRNCDLPPPQKLF-----TASDKGAMAG----------RGRGREEVETGGMEE------- 100
           I+NCDLPPPQKL      ++ +KG              + R    +   G  E       
Sbjct: 141 IQNCDLPPPQKLHKSIHSSSGEKGFKTAVKSPWKQGVWKDRFERSLSYNGSTESKNTSPM 200

Query: 101 ---------KLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLK 160
                    K +LL+ALR SQTRAREAER A +   E+D +      +A  +  Y+Q LK
Sbjct: 201 SSPRSDDLSKGQLLEALRHSQTRAREAERAAREACAEKDRVITILLKQASQMLAYKQWLK 260

Query: 161 LMELRVSKLKKRKEEEED-------------NGNGNGNGNRGVKWVWALAICLSVVGVGI 182
           L+E+    L+ +KEEE++              G     G  G +++ A A+  S++G G+
Sbjct: 261 LLEMEALYLQMKKEEEQEEQVKGMNLKKRKQRGEKKKKGETG-RYMMAFALGFSLIGAGL 320

[Close]

BLAST of Csor.00g024350 vs. TAIR 10
Match: AT1G01240.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 5.0e-12
Identity = 59/185 (31.89%), Postives = 87/185 (47.03%), Query Frame = 0


Query: 41  IRNCDLPPPQKLF-----TASDKGAMAG----------RGRGREEVETGGMEE------- 100
           I+NCDLPPPQKL      ++ +KG              + R    +   G  E       
Sbjct: 141 IQNCDLPPPQKLHKSIHSSSGEKGFKTAVKSPWKQGVWKDRFERSLSYNGSTESKNTSPM 200

Query: 101 ---------KLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLK 160
                    K +LL+ALR SQTRAREAER A +   E+D +      +A  +  Y+Q LK
Sbjct: 201 SSPRSDDLSKGQLLEALRHSQTRAREAERAAREACAEKDRVITILLKQASQMLAYKQWLK 260

Query: 161 LMELRVSKLKKRKEEEED-------------NGNGNGNGNRGVKWVWALAICLSVVGVGI 182
           L+E+    L+ +KEEE++              G     G  G +++ A A+  S++G G+
Sbjct: 261 LLEMEALYLQMKKEEEQEEQVKGMNLKKRKQRGEKKKKGETG-RYMMAFALGFSLIGAGL 320

[Close]

BLAST of Csor.00g024350 vs. TAIR 10
Match: AT2G46550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-11
Identity = 59/200 (29.50%), Postives = 92/200 (46.00%), Query Frame = 0


Query: 27  DMLLEFPYKPGVDLIRNCDLPPPQKL---FTASDKG--------------AMAGRGRG-- 86
           D L     +  +D + NCDLP PQK+   +  S +G               + G  +G  
Sbjct: 189 DELASLVAQRSLDYVENCDLPTPQKMKRSYYGSPRGFDSDGLRDYSVSGQTIKGTSKGSS 248

Query: 87  ---REEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCY 146
              R E  +     K ELL+ALR SQTRAREAE  A +   E++ + +    +A  +F Y
Sbjct: 249 CKNRPEASSESDLSKSELLEALRRSQTRAREAENMAKEAYAEKEHLVKILLKQAAELFGY 308

Query: 147 RQSLKLMELRVSKLKKRKEEEEDNGN----------GNGNGNR-------------GVKW 182
           +Q L+L++L    L+ + +E ++  N           NG   +             G K+
Sbjct: 309 KQWLQLLQLEALYLQIKNKEIDNKNNDDPGVSIPCWSNGKARKEGRKRRSKRGKPNGAKY 368

[Close]

BLAST of Csor.00g024350 vs. TAIR 10
Match: AT2G46550.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3). )

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-11
Identity = 59/200 (29.50%), Postives = 92/200 (46.00%), Query Frame = 0


Query: 27  DMLLEFPYKPGVDLIRNCDLPPPQKL---FTASDKG--------------AMAGRGRG-- 86
           D L     +  +D + NCDLP PQK+   +  S +G               + G  +G  
Sbjct: 49  DELASLVAQRSLDYVENCDLPTPQKMKRSYYGSPRGFDSDGLRDYSVSGQTIKGTSKGSS 108

Query: 87  ---REEVETGGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCY 146
              R E  +     K ELL+ALR SQTRAREAE  A +   E++ + +    +A  +F Y
Sbjct: 109 CKNRPEASSESDLSKSELLEALRRSQTRAREAENMAKEAYAEKEHLVKILLKQAAELFGY 168

Query: 147 RQSLKLMELRVSKLKKRKEEEEDNGN----------GNGNGNR-------------GVKW 182
           +Q L+L++L    L+ + +E ++  N           NG   +             G K+
Sbjct: 169 KQWLQLLQLEALYLQIKNKEIDNKNNDDPGVSIPCWSNGKARKEGRKRRSKRGKPNGAKY 228

The following BLAST results are available for this feature:

BLAST of Csor.00g024350 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g024350 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600670.1	3.44e-133	100.00	hypothetical protein SDJN03_05903, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7031309.1	5.33e-127	97.42	hypothetical protein SDJN02_05349, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022970087.1	1.16e-124	96.39	uncharacterized protein LOC111469054 [Cucurbita maxima]	[more]
XP_022943244.1	1.20e-123	95.88	uncharacterized protein LOC111448032 [Cucurbita moschata]	[more]
XP_023545135.1	6.11e-87	75.26	uncharacterized protein LOC111804522 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g024350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HY55	5.61e-125	96.39	uncharacterized protein LOC111469054 OS=Cucurbita maxima OX=3661 GN=LOC111469054...	[more]
A0A6J1FTQ9	5.83e-124	95.88	uncharacterized protein LOC111448032 OS=Cucurbita moschata OX=3662 GN=LOC1114480...	[more]
A0A6J1C873	4.77e-73	69.23	uncharacterized protein LOC111008325 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A5D3BEN7	5.71e-61	64.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C2P7	5.71e-61	64.91	uncharacterized protein LOC103495794 OS=Cucumis melo OX=3656 GN=LOC103495794 PE=...	[more]

BLAST of Csor.00g024350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01240.1	5.0e-12	31.89	unknown protein; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 1...	[more]
AT1G01240.2	5.0e-12	31.89	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G01240.3	5.0e-12	31.89	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G46550.1	1.4e-11	29.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G46550.2	1.4e-11	29.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 128..148
None	No IPR available	COILS	Coil	Coil	coord: 86..113
None	No IPR available	PANTHER	PTHR33868	EXPRESSED PROTEIN	coord: 21..182
None	No IPR available	PANTHER	PTHR33868:SF10	OS08G0483100 PROTEIN	coord: 21..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g024350.m01	Csor.00g024350.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane