Csor.00g022730 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g022730
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	F-box domain-containing protein
Location	Csor_Chr04: 3492472 .. 3494774 (-)
RNA-Seq Expression	Csor.00g022730
Synteny	Csor.00g022730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTCTGCGCTTCTCTCAGTTCCTGCGCCTCAGCGAGCTCCATTCTTCCACTCCTCCTATGCAACCACTCCGAGATTGTCTCATGGACCCAGAACTTCACTCAGATTTTCATCATCTAGGGGCGTCAGCTTCCTCTCTTCCTCCTCTTCCTCCTCTTCTTCTTCTTCTGTTGTAGATGAAGAAACAAATTCTTCTTCTCCCGACGACCTCTCTCTTCAGTCTGAATCAGACCCTGATGCTTCTTCGTTCAGGTATTGATGATTTGATCCTTCGTCTCTCTGTTTGCAAGATTCTGATGATAGAAGAGTGATTTTGATAACTTTAATTCCATGGTGGTTCTGTGTTCGTTTATTGGATTACATTTATCTAGCTATGATAACTGTGTTATGTGTAGAACATTCTCCTCTTGAATTTTGGATTGAATTACTCCAAATGATGCTGAATGATGGACGAGCTCTAGCATTTGGTAAATAAACGAGGGTGAAAATTCTAGTTGTTGAGTATTGCTCTAGTTGATTATCATCCATAAAACTTCCTTTGAATTTTCAGTTTTCCCCTTGACTATCCATATGGATGCTCATGCTCTGGTTGAGAAGTTAAATATGTCCTAAATTTGAAATAGTCACCTTAAGAGGGAAAACGTGCGCCAATTTTCCTTGTTTCTCCTAGGAACTAGTTAAACAAACAAGATGTGGGAAGAACAAAATAACCTCTAAGCTCCCTCTGCTCATACTCAATCCTATTGGTGTAATCAGCTGAGAACAAGACTTGGTTCAGCACTTGAAATCAGTATCATCCCATCATGACTGAATGTCTCTCTATTTCGCTTGTTCTTGTACATATTATATAGGCCATGTATTTCAGTGTGTAAAGGACATGAATTGAATCAGTCCACAATGCAGGGTGAAAACTAGTTGAACGGTTCATTTCAAACCACACCTGGGGTCTCTTGAGACCATCAATTTAGATATATTCACGCCATTTTCACTTAGAATGTTATGGTCTGAATTTTTCCTGCCTTAACTTATAATAATGATGGTGCCAACGATATGGCTTAGAACAATCTTGTTTTCTCTTTCATTTCTTATAAACAGAGGATGCAAAGCCTGTGGAAAGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTCCCAGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGAATTTGTAGCATCCGGTGGCAGATATAAGCGTCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGCAAGGACAGAAGCCTCTGCTGCTGGTGGCAAAAAGGACTCGTTGAGGTACAAGCCATATATCCCTTTCCTTATGAAGTAAATTCATATGTTTATATACTTTCAGAACTTGTAATGCTGCAATCTAACATGCTGCTCTTGTATACTGACTTGTAAAATGACCAAACCGAATGCTTGATACCAATTTTGTGAACTTGCTGACACCATAGGGATAAGAATAGCTGGAAGTTTGGCGAAAATAGCTTCTTCCATTTTTCTTTGGCTGGGAGAAATGAAAGTATTATCTCATTATCCGAGTACTGTAGGAGAGGAAGGCCATCTCGAAATGGCATGGTTGCTTTCATAACTGGTTTCTGGGTTGTCAGTAAAATTCTCTTGTTAGCTTCATTTTGTTCTCATTGTTCTTATCAGCCTGATAGTAAGAGAAGGTAGCTGTTAGGATTAGGATTTCCATAATGTGACCAAGCTTCTTGTTATCATTGTGGTTTAGGATTCCCCCTGTCGTTTTTCTTGAATTTCCTTCATGTTTTACTTTGAGTTTCTAACTTTTTAACGATACCGATTCATTCACTTTTCGTTACGTCGTTTCGTCCAGCAAGAAAAAGTCGGCAAAGGGGTAATATAGGCAGGCTTACCATCCACAAGTTGATACACAAACAGGGAGGGAATGAAGGATGGATGATGTAGAATTGGTGTCATGGAAATACTACATGTGAATGGGTGAAAACTGAACAACAAAATCTCATTGGGATTTTTCTGTATTGAAATTTGGCTAGATTCTCACTTCTTTTAGGCTTCTGTAACATCAGAATGCTGCATTTAAAGCACAGAAAATTTTCCAATCCATGGTTTGTTTGAAGCGTATCAAGATTCATTCTTTGCAGGATATTTTCTTTTCCAGTTCCTAACGGATGCCTTGTTCGTTCTCTCATGCCTAATTCTCCCAGGAATATTTCACCAAAGCAGTATGATTTCAACAAATTTGAACTAGAAGTTGGTATGAGCAGGTGA

mRNA sequence

ATGGGCTCTGCGCTTCTCTCAGTTCCTGCGCCTCAGCGAGCTCCATTCTTCCACTCCTCCTATGCAACCACTCCGAGATTGTCTCATGGACCCAGAACTTCACTCAGATTTTCATCATCTAGGGGCGTCAGCTTCCTCTCTTCCTCCTCTTCCTCCTCTTCTTCTTCTTCTGTTGTAGATGAAGAAACAAATTCTTCTTCTCCCGACGACCTCTCTCTTCAGTCTGAATCAGACCCTGATGCTTCTTCGTTCAGAGGATGCAAAGCCTGTGGAAAGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTCCCAGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGAATTTGTAGCATCCGGTGGCAGATATAAGCGTCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGCAAGGACAGAAGCCTCTGCTGCTGGTGGCAAAAAGGACTCGTTGAGCAAGAAAAAGTCGGCAAAGGGGATATTTTCTTTTCCAGTTCCTAACGGATGCCTTGTTCGTTCTCTCATGCCTAATTCTCCCAGGAATATTTCACCAAAGCAGTATGATTTCAACAAATTTGAACTAGAAGTTGGTATGAGCAGGTGA

Coding sequence (CDS)

ATGGGCTCTGCGCTTCTCTCAGTTCCTGCGCCTCAGCGAGCTCCATTCTTCCACTCCTCCTATGCAACCACTCCGAGATTGTCTCATGGACCCAGAACTTCACTCAGATTTTCATCATCTAGGGGCGTCAGCTTCCTCTCTTCCTCCTCTTCCTCCTCTTCTTCTTCTTCTGTTGTAGATGAAGAAACAAATTCTTCTTCTCCCGACGACCTCTCTCTTCAGTCTGAATCAGACCCTGATGCTTCTTCGTTCAGAGGATGCAAAGCCTGTGGAAAGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTCCCAGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGAATTTGTAGCATCCGGTGGCAGATATAAGCGTCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGCAAGGACAGAAGCCTCTGCTGCTGGTGGCAAAAAGGACTCGTTGAGCAAGAAAAAGTCGGCAAAGGGGATATTTTCTTTTCCAGTTCCTAACGGATGCCTTGTTCGTTCTCTCATGCCTAATTCTCCCAGGAATATTTCACCAAAGCAGTATGATTTCAACAAATTTGAACTAGAAGTTGGTATGAGCAGGTGA

Protein sequence

MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVDEETNSSSPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLSKKKSAKGIFSFPVPNGCLVRSLMPNSPRNISPKQYDFNKFELEVGMSR

Homology

[Close]

BLAST of Csor.00g022730 vs. NCBI nr
Match: KAG6600508.1 (hypothetical protein SDJN03_05741, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 412 bits (1058), Expect = 1.01e-144
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD 60
           MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD
Sbjct: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD 60

Query: 61  EETNSSSPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120
           EETNSSSPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI
Sbjct: 61  EETNSSSPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120

Query: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLSKKKSAKGIFSFPVP 180
           KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLSKKKSAKGIFSFPVP
Sbjct: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLSKKKSAKGIFSFPVP 180

Query: 181 NGCLVRSLMPNSPRNISPKQYDFNKFELEVGMSR 214
           NGCLVRSLMPNSPRNISPKQYDFNKFELEVGMSR
Sbjct: 181 NGCLVRSLMPNSPRNISPKQYDFNKFELEVGMSR 214

[Close]

BLAST of Csor.00g022730 vs. NCBI nr
Match: XP_022942141.1 (uncharacterized protein LOC111447296 [Cucurbita moschata])

HSP 1 Score: 374 bits (959), Expect = 9.68e-130
Identity = 199/214 (92.99%), Postives = 200/214 (93.46%), Query Frame = 0


Query: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD 60
           MGSALLSVPAPQRAPFFHSSYATTPRLSHGP TSLRFSSSRGVSFLSSSSSSSSSSSVVD
Sbjct: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPITSLRFSSSRGVSFLSSSSSSSSSSSVVD 60

Query: 61  EETNSSSPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120
           EETNSS PDDLSLQSESDPD SSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI
Sbjct: 61  EETNSSPPDDLSLQSESDPDGSSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120

Query: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLSKKKSAKGIFSFPVP 180
           KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAA GKKDSL        IFS PVP
Sbjct: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSLR-------IFSLPVP 180

Query: 181 NGCLVRSLMPNSPRNISPKQYDFNKFELEVGMSR 214
           NGCLV SLMP+SPRNISPKQYDFNKFELEVGMSR
Sbjct: 181 NGCLVCSLMPSSPRNISPKQYDFNKFELEVGMSR 207

[Close]

BLAST of Csor.00g022730 vs. NCBI nr
Match: XP_023527851.1 (uncharacterized protein LOC111790947 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361 bits (926), Expect = 9.65e-125
Identity = 193/214 (90.19%), Postives = 197/214 (92.06%), Query Frame = 0


Query: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD 60
           MG+ALLSVPAPQRAPFFHSSYATT RLSHGPRTSLRFSSSRGVSFLSSSSSSS+S  VVD
Sbjct: 1   MGTALLSVPAPQRAPFFHSSYATTTRLSHGPRTSLRFSSSRGVSFLSSSSSSSAS--VVD 60

Query: 61  EETNSSSPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120
           EETNSS PDDLSLQSESDPDASSFRGCKACGKEEIERGCNG+GRIQGGIATVPGFGWWPI
Sbjct: 61  EETNSSPPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGDGRIQGGIATVPGFGWWPI 120

Query: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLSKKKSAKGIFSFPVP 180
           KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAA GKKDS         IFSFPVP
Sbjct: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSSR-------IFSFPVP 180

Query: 181 NGCLVRSLMPNSPRNISPKQYDFNKFELEVGMSR 214
            GCLVRSLMP SPRNISPKQ+DF KFELEVGMSR
Sbjct: 181 KGCLVRSLMPASPRNISPKQFDFKKFELEVGMSR 205

[Close]

BLAST of Csor.00g022730 vs. NCBI nr
Match: XP_022982784.1 (uncharacterized protein LOC111481538 isoform X1 [Cucurbita maxima])

HSP 1 Score: 349 bits (895), Expect = 4.93e-120
Identity = 186/214 (86.92%), Postives = 193/214 (90.19%), Query Frame = 0


Query: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD 60
           MG+ALLSVPAPQRAPFFHSSYAT+PR SHGPRTSLRFSSSRGVSFLSSSSSS+S   VVD
Sbjct: 1   MGTALLSVPAPQRAPFFHSSYATSPRWSHGPRTSLRFSSSRGVSFLSSSSSSAS---VVD 60

Query: 61  EETNSSSPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120
           EETNSS PDDLSLQSESDPDASSFRGCKACG+EEIERGCNG+GRIQGGIATVPGFGWWPI
Sbjct: 61  EETNSSPPDDLSLQSESDPDASSFRGCKACGREEIERGCNGDGRIQGGIATVPGFGWWPI 120

Query: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLSKKKSAKGIFSFPVP 180
           KAYRPCP FVASGGRYKRRGQSMDEVTSGGAR EASA  G+KDS         IF FPVP
Sbjct: 121 KAYRPCPGFVASGGRYKRRGQSMDEVTSGGARKEASADAGRKDSSR-------IFCFPVP 180

Query: 181 NGCLVRSLMPNSPRNISPKQYDFNKFELEVGMSR 214
           NGCLV SLMP SPRNISPKQ+DFNKFELEVGMSR
Sbjct: 181 NGCLVCSLMPASPRNISPKQFDFNKFELEVGMSR 204

[Close]

BLAST of Csor.00g022730 vs. NCBI nr
Match: KAG7031146.1 (hypothetical protein SDJN02_05185 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310 bits (793), Expect = 6.41e-105
Identity = 165/168 (98.21%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD 60
           MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD
Sbjct: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD 60

Query: 61  EETNSSSPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120
           EETNSS PDDLSLQSESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI
Sbjct: 61  EETNSSPPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120

Query: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLSKK 168
           KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSL  K
Sbjct: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLRYK 168

[Close]

BLAST of Csor.00g022730 vs. ExPASy TrEMBL
Match: A0A6J1FN06 (uncharacterized protein LOC111447296 OS=Cucurbita moschata OX=3662 GN=LOC111447296 PE=4 SV=1)

HSP 1 Score: 374 bits (959), Expect = 4.69e-130
Identity = 199/214 (92.99%), Postives = 200/214 (93.46%), Query Frame = 0


Query: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD 60
           MGSALLSVPAPQRAPFFHSSYATTPRLSHGP TSLRFSSSRGVSFLSSSSSSSSSSSVVD
Sbjct: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPITSLRFSSSRGVSFLSSSSSSSSSSSVVD 60

Query: 61  EETNSSSPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120
           EETNSS PDDLSLQSESDPD SSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI
Sbjct: 61  EETNSSPPDDLSLQSESDPDGSSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120

Query: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLSKKKSAKGIFSFPVP 180
           KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAA GKKDSL        IFS PVP
Sbjct: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSLR-------IFSLPVP 180

Query: 181 NGCLVRSLMPNSPRNISPKQYDFNKFELEVGMSR 214
           NGCLV SLMP+SPRNISPKQYDFNKFELEVGMSR
Sbjct: 181 NGCLVCSLMPSSPRNISPKQYDFNKFELEVGMSR 207

[Close]

BLAST of Csor.00g022730 vs. ExPASy TrEMBL
Match: A0A6J1J5I4 (uncharacterized protein LOC111481538 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481538 PE=4 SV=1)

HSP 1 Score: 349 bits (895), Expect = 2.39e-120
Identity = 186/214 (86.92%), Postives = 193/214 (90.19%), Query Frame = 0


Query: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD 60
           MG+ALLSVPAPQRAPFFHSSYAT+PR SHGPRTSLRFSSSRGVSFLSSSSSS+S   VVD
Sbjct: 1   MGTALLSVPAPQRAPFFHSSYATSPRWSHGPRTSLRFSSSRGVSFLSSSSSSAS---VVD 60

Query: 61  EETNSSSPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120
           EETNSS PDDLSLQSESDPDASSFRGCKACG+EEIERGCNG+GRIQGGIATVPGFGWWPI
Sbjct: 61  EETNSSPPDDLSLQSESDPDASSFRGCKACGREEIERGCNGDGRIQGGIATVPGFGWWPI 120

Query: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLSKKKSAKGIFSFPVP 180
           KAYRPCP FVASGGRYKRRGQSMDEVTSGGAR EASA  G+KDS         IF FPVP
Sbjct: 121 KAYRPCPGFVASGGRYKRRGQSMDEVTSGGARKEASADAGRKDSSR-------IFCFPVP 180

Query: 181 NGCLVRSLMPNSPRNISPKQYDFNKFELEVGMSR 214
           NGCLV SLMP SPRNISPKQ+DFNKFELEVGMSR
Sbjct: 181 NGCLVCSLMPASPRNISPKQFDFNKFELEVGMSR 204

[Close]

BLAST of Csor.00g022730 vs. ExPASy TrEMBL
Match: A0A6J1J0C4 (uncharacterized protein LOC111481538 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481538 PE=4 SV=1)

HSP 1 Score: 294 bits (753), Expect = 3.12e-99
Identity = 157/173 (90.75%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD 60
           MG+ALLSVPAPQRAPFFHSSYAT+PR SHGPRTSLRFSSSRGVSFLSSSSSS+S   VVD
Sbjct: 1   MGTALLSVPAPQRAPFFHSSYATSPRWSHGPRTSLRFSSSRGVSFLSSSSSSAS---VVD 60

Query: 61  EETNSSSPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120
           EETNSS PDDLSLQSESDPDASSFRGCKACG+EEIERGCNG+GRIQGGIATVPGFGWWPI
Sbjct: 61  EETNSSPPDDLSLQSESDPDASSFRGCKACGREEIERGCNGDGRIQGGIATVPGFGWWPI 120

Query: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLSKKKSAKG 173
           KAYRPCP FVASGGRYKRRGQSMDEVTSGGAR EASA  G+KDS SKKKSAKG
Sbjct: 121 KAYRPCPGFVASGGRYKRRGQSMDEVTSGGARKEASADAGRKDSSSKKKSAKG 170

[Close]

BLAST of Csor.00g022730 vs. ExPASy TrEMBL
Match: A0A6J1C7J9 (uncharacterized protein LOC111008142 OS=Momordica charantia OX=3673 GN=LOC111008142 PE=4 SV=1)

HSP 1 Score: 258 bits (660), Expect = 5.15e-85
Identity = 140/173 (80.92%), Postives = 151/173 (87.28%), Query Frame = 0


Query: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD 60
           MG+ALLSVPAP+  PFFH SY TTPR ++G  TSL FSSSR +SFLSSSSSSSS+S VVD
Sbjct: 1   MGTALLSVPAPRPTPFFHCSYGTTPRWTYGSTTSLGFSSSRRISFLSSSSSSSSAS-VVD 60

Query: 61  EETNSSSPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120
           E+TNSS PD+LSLQSESDPD SSFRGCKACGKEEIERGCN EGRIQGGIATVPGFGWWPI
Sbjct: 61  EQTNSSPPDELSLQSESDPDDSSFRGCKACGKEEIERGCNEEGRIQGGIATVPGFGWWPI 120

Query: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLSKKKSAKG 173
           KAYRPCP FVASGGRYKRRGQSMDEV SGG RT+AS    +K+SLSKKKS  G
Sbjct: 121 KAYRPCPGFVASGGRYKRRGQSMDEVASGGGRTDASVGARRKNSLSKKKSGTG 172

[Close]

BLAST of Csor.00g022730 vs. ExPASy TrEMBL
Match: A0A1S3BSL8 (uncharacterized protein LOC103493082 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493082 PE=4 SV=1)

HSP 1 Score: 241 bits (614), Expect = 3.42e-78
Identity = 141/173 (81.50%), Postives = 149/173 (86.13%), Query Frame = 0


Query: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD 60
           MG+ALLSVPAP    FFHSS+ +  R +    TSL FSSSR  +FLSSSSSSSS+S VVD
Sbjct: 1   MGTALLSVPAP----FFHSSHRS--RFT----TSLPFSSSRPTTFLSSSSSSSSTS-VVD 60

Query: 61  EETNSSSPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120
           EE NSSSPD LSLQSESDPD SSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI
Sbjct: 61  EEINSSSPDQLSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120

Query: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLSKKKSAKG 173
           KAYRPCP FVASGGRYKRRGQSMDEVTSGG RTEASA+  +KDS SKKKSAKG
Sbjct: 121 KAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASVSRKDSSSKKKSAKG 162

[Close]

BLAST of Csor.00g022730 vs. TAIR 10
Match: AT5G42070.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27
Identity = 79/168 (47.02%), Postives = 102/168 (60.71%), Query Frame = 0


Query: 1   MGSALLSVPAPQRAPFFHSSYATTPRLSHGPRTSLRFSSSRGVSFLSSSSSSSSSSSVVD 60
           M +++ S+  P+   F + S+ + P  S       + S       L   S SSS SSVV 
Sbjct: 1   MANSISSISLPRCFIFNNGSHKSRPWPSSSSFFLNKSSKHHPHPLL---SLSSSPSSVV- 60

Query: 61  EETNSSSPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPI 120
            ET++   +DL           +F GC+ACGKEE E GCNG+GRIQGGIATVPGFGWWPI
Sbjct: 61  -ETDNDDDNDL-----------TFSGCRACGKEEKESGCNGDGRIQGGIATVPGFGWWPI 120

Query: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAGGKKDSLSKK 169
           KAYRPCP FV +GGRY+R GQSMDEV  G   +++S +    DSL ++
Sbjct: 121 KAYRPCPAFVEAGGRYRRIGQSMDEVAFGRGDSKSSTSVDTSDSLLRQ 152

The following BLAST results are available for this feature:

BLAST of Csor.00g022730 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g022730 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600508.1	1.01e-144	100.00	hypothetical protein SDJN03_05741, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022942141.1	9.68e-130	92.99	uncharacterized protein LOC111447296 [Cucurbita moschata]	[more]
XP_023527851.1	9.65e-125	90.19	uncharacterized protein LOC111790947 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022982784.1	4.93e-120	86.92	uncharacterized protein LOC111481538 isoform X1 [Cucurbita maxima]	[more]
KAG7031146.1	6.41e-105	98.21	hypothetical protein SDJN02_05185 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Csor.00g022730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FN06	4.69e-130	92.99	uncharacterized protein LOC111447296 OS=Cucurbita moschata OX=3662 GN=LOC1114472...	[more]
A0A6J1J5I4	2.39e-120	86.92	uncharacterized protein LOC111481538 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J0C4	3.12e-99	90.75	uncharacterized protein LOC111481538 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1C7J9	5.15e-85	80.92	uncharacterized protein LOC111008142 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A1S3BSL8	3.42e-78	81.50	uncharacterized protein LOC103493082 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Csor.00g022730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42070.1	1.2e-27	47.02	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..85
None	No IPR available	PANTHER	PTHR47721:SF2	OS01G0235100 PROTEIN	coord: 1..169
None	No IPR available	PANTHER	PTHR47721	OS01G0235100 PROTEIN	coord: 1..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g022730.m01	Csor.00g022730.m01	mRNA