Csor.00g019390 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATCGATACCACTCCCTTCGAATTCGGCGGCGACGGTGACGGCGGCCGTCGATGCGGCAAGTCTTGCAGCAGACCTTCTAAGTACGACGTCGTCGGAGACATCTTCTTCGGTAAGGATGATATGAAGGAATACGCATGGGATGGAGCTTTCACTGAGAAAACGGTTCGATTCATTGAAAGTGAGTCCGCCATGAAAGCTCTGAGAAAGAGAAGCAATAGAAGGCCAGAAACATTCGATTGCTTTGAGTTCTTGAAATTCGTGTGGTGCTTCATATTTTAACTCTCTTCTTCTTCCACGAACATCGATTCGAATGTCTATATCCATCGATGAATTTCGATCTCCTTGTTTGTTTTCTTTCTCCTTCTTCTTCCTTGCTCGATCGATGCTGAATCATCGAAATTTTCCGAGCGAGGATTTGTAATTAATTAGAATTGTGATCTCTGGATCCGTCAATTGAAATGATTAAAATGCTTCAGATATCATCGATCTCTGCTCGTTTCAATCTGTTTGTATAGGAAGACGAGTGAAAATTGTGCTCTGAATCTGAATAATTTTCTTGGAATCCAAACAGTATTAGGTGAACCGAATGATGCCAAAATTTTGCTTGATCAACTCGAATTCCTTGGAAAGCAATTTGCATTCTACAATAATGGAGTTGTTGATAAATCTCTCTGTTCTTATTTTTCAATTGTCACACGTGAAAATCAAGTGTAAATATGAAGAAGAACAACAACAACAAATTAGTGAAAAACAAAATTCAAATCCAATAAAACATATAAAATAATTCAAACATTTTTTGAAATTATGATTTGGAAAATGAACCCACCAAATTTGTCTGGACTAAAAAAAAATAATAACTTCGACCAAACCAAATAATTTATTTGGTTTATTAGAGTGACCTTTAATTCGGAGTAGCACGACGTAGCAACATTTTTATTAAAAATATATAAAAAAAAATTAGAGTGACTCTTAATTCGAAATGATATAAAATAAAAATTTTAACAGATCGGGAAGCGACCTTACTACTTATAATTTTAAAAGTTTAATTTAGTTTGCACCGACTAAATTTAATATAAATTATAATATGGTTAGAAAATTTTGATTTTTATTATAAAATAAAATAGAAAATAATAAATAAAAAAGAGGTGAGGAAAATAAAATTTATAAATTGGAGGTTTGACCGTCGGTGCATTTGGTTGTGTTGATGCTTTCCAAGTTTGATTGCCAAAGAGCTTATCATATTCCTTTTTCCTCCACTCATTTTTTATATTTTTTTATATTATTATTATTATTATTATTATAATTATTATAAACATTATAAACATTATTTTATTTCTTAAACTTCTGACCTATAGAGGATTCATTTTGTCTGTGCATCACTTGAAACCGACCATCCATTTTTAAATCACAATAATTCCAATAATCTCAAGTGTTATTTTATTTTTTGTATTTTTTCAATGTTTTTAATTTAAAAATAATTGTGGGAACCGAAATCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTACCTATTAGGAATGGGTTATTATTGCAAATTTATATTTCAGAAAATAAACAGAATTTTCCTTCCATTTTGGGCCTTGAATGGGCCCAACATGAATACAGGCCACGGCCCGTAATTTACTTAAAGCCCACATTCAAAAAAGCCTCGATACAATTTTTTTTTTTTTTTTTTTAATTAGGTTAAATTATAAATGTTTGTGTATATTTTATTATTAAAATATTTAAAAGTATTTAATAAATTATATGTTTAGCAATAAGCATAATTAAGTTCTCCATAAATCCTGTTATTACTAAGGTTTGTACATTTAAAATAAAGAACAATAAGAGGATTTTACACATTAATTAATCAGTTAAATTATGTAGCCGTTCGACGGTTTTCCACGGTCAACGTCAAACGGTCTTCAGAGCCGTTATCCGTCACGCCAGCTGTCTCGACCGCCGCGGATTTTACACAGACTATATATTTCTCCCGCAGTCACACTCTTATTCGGCACATTCTCATACTAGAATCAGAGCGCTCCATCAATGGCCTCTTCCCTTTTGAGTGTTCGTTGCCGAAATCAAACGGATCATTACCAGGCAATCGGAGAGCAGAATCGAAAGAAGTATCTCGCCTCGTCTCGGTGATGCAAATAGAGGTAATGTAACTTAATTTCAGCCGGCTATTCCGAATTAGGGGTTCATTGGAGAACTTAATCAAATGATTGTTCGTTTTTTTCGACACGTTTTGTATTTTTTCGTGGTTTCGATTACGGAGGATTAGGGCGTTTTTAGTAGGTTCATTGCTCCCATGGTAGCGTGATTATTATCTTGGACTCCTCGTTTCATTCCCTGTCATCTTCTATCTCTTCTCTGTGTGATGAGCCAATGGACAATCCTGATATTCAAATTTATGTATTGGCTGAAGAGAGCAGGACGACGAACTCTTATGTCATCGAGTTTTGTTCCGATAACAGAGAGGGGAAGAACAAGGCAGTTGTTCTTGATGAAGTGATTGCTTGGGCAACAGAAAAGCAGTTCGTCTTGTCATTGAGGCTGGTTGGATTTTCGCATCTGCTAGGAATACTGGTATGA ATGGCCATCGATACCACTCCCTTCGAATTCGGCGGCGACGGTGACGGCGGCCGTCGATGCGGCAAGTCTTGCAGCAGACCTTCTAAGTACGACGTCGTCGGAGACATCTTCTTCGGTAAGGATGATATGAAGGAATACGCATGGGATGGAGCTTTCACTGAGAAAACGGTTCGATTCATTGAAACCGTTCGACGGTTTTCCACGGTCAACGTCAAACGGTCTTCAGAGCCGTTATCCGTCACGCCAGCTGTCTCGACCGCCGCGGATTTTACACAGACTATATATTTCTCCCGCAGTCACACTCTTATTCGGCACATTCTCATACTAGAATCAGAGCGCTCCATCAATGGCCTCTTCCCTTTTGAGTGTTCGTTGCCGAAATCAAACGGATCATTACCAGGCAATCGGAGAGCAGAATCGAAAGAAGTATCTCGCCTCGTCTCGGTGATGCAAATAGAGGTTCATTGCTCCCATGGTAGCGTGATTATTATCTTGGACTCCTCGTTTCATTCCCTGTCATCTTCTATCTCTTCTCTGTGTGATGAGCCAATGGACAATCCTGATATTCAAATTTATGTATTGGCTGAAGAGAGCAGGACGACGAACTCTTATGTCATCGAGTTTTGTTCCGATAACAGAGAGGGGAAGAACAAGGCAGTTGTTCTTGATGAAGTGATTGCTTGGGCAACAGAAAAGCAGTTCGTCTTGTCATTGAGGCTGGTTGGATTTTCGCATCTGCTAGGAATACTGGTATGA ATGGCCATCGATACCACTCCCTTCGAATTCGGCGGCGACGGTGACGGCGGCCGTCGATGCGGCAAGTCTTGCAGCAGACCTTCTAAGTACGACGTCGTCGGAGACATCTTCTTCGGTAAGGATGATATGAAGGAATACGCATGGGATGGAGCTTTCACTGAGAAAACGGTTCGATTCATTGAAACCGTTCGACGGTTTTCCACGGTCAACGTCAAACGGTCTTCAGAGCCGTTATCCGTCACGCCAGCTGTCTCGACCGCCGCGGATTTTACACAGACTATATATTTCTCCCGCAGTCACACTCTTATTCGGCACATTCTCATACTAGAATCAGAGCGCTCCATCAATGGCCTCTTCCCTTTTGAGTGTTCGTTGCCGAAATCAAACGGATCATTACCAGGCAATCGGAGAGCAGAATCGAAAGAAGTATCTCGCCTCGTCTCGGTGATGCAAATAGAGGTTCATTGCTCCCATGGTAGCGTGATTATTATCTTGGACTCCTCGTTTCATTCCCTGTCATCTTCTATCTCTTCTCTGTGTGATGAGCCAATGGACAATCCTGATATTCAAATTTATGTATTGGCTGAAGAGAGCAGGACGACGAACTCTTATGTCATCGAGTTTTGTTCCGATAACAGAGAGGGGAAGAACAAGGCAGTTGTTCTTGATGAAGTGATTGCTTGGGCAACAGAAAAGCAGTTCGTCTTGTCATTGAGGCTGGTTGGATTTTCGCATCTGCTAGGAATACTGGTATGA MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFIETVRRFSTVNVKRSSEPLSVTPAVSTAADFTQTIYFSRSHTLIRHILILESERSINGLFPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSLSSSISSLCDEPMDNPDIQIYVLAEESRTTNSYVIEFCSDNREGKNKAVVLDEVIAWATEKQFVLSLRLVGFSHLLGILV Homology
BLAST of Csor.00g019390 vs. NCBI nr
Match: KAG6600176.1 (hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 496 bits (1278), Expect = 4.98e-177 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of Csor.00g019390 vs. NCBI nr
Match: KAG7030840.1 (hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 494 bits (1271), Expect = 4.82e-175 Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0
BLAST of Csor.00g019390 vs. NCBI nr
Match: KAG7011932.1 (hypothetical protein SDJN02_26840, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 111 bits (278), Expect = 1.46e-26 Identity = 57/77 (74.03%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of Csor.00g019390 vs. NCBI nr
Match: KAG7015246.1 (hypothetical protein SDJN02_22880, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 101 bits (251), Expect = 2.40e-23 Identity = 51/63 (80.95%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of Csor.00g019390 vs. NCBI nr
Match: XP_022977832.1 (uncharacterized protein LOC111478006 isoform X2 [Cucurbita maxima] >XP_022977840.1 uncharacterized protein LOC111478006 isoform X2 [Cucurbita maxima] >XP_022977847.1 uncharacterized protein LOC111478006 isoform X2 [Cucurbita maxima]) HSP 1 Score: 101 bits (251), Expect = 7.83e-22 Identity = 80/206 (38.83%), Postives = 98/206 (47.57%), Query Frame = 0
BLAST of Csor.00g019390 vs. ExPASy TrEMBL
Match: A0A6J1ING1 (uncharacterized protein LOC111478006 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478006 PE=4 SV=1) HSP 1 Score: 101 bits (251), Expect = 3.79e-22 Identity = 80/206 (38.83%), Postives = 98/206 (47.57%), Query Frame = 0
BLAST of Csor.00g019390 vs. ExPASy TrEMBL
Match: A0A6J1IL14 (uncharacterized protein LOC111478006 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478006 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.35e-21 Identity = 79/202 (39.11%), Postives = 97/202 (48.02%), Query Frame = 0
BLAST of Csor.00g019390 vs. ExPASy TrEMBL
Match: A0A5D3DK72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00350 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 3.92e-13 Identity = 37/62 (59.68%), Postives = 40/62 (64.52%), Query Frame = 0
BLAST of Csor.00g019390 vs. ExPASy TrEMBL
Match: A0A0A0L658 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175640 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 3.92e-13 Identity = 38/62 (61.29%), Postives = 40/62 (64.52%), Query Frame = 0
BLAST of Csor.00g019390 vs. ExPASy TrEMBL
Match: A0A0A0KKR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524620 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.76e-12 Identity = 59/127 (46.46%), Postives = 66/127 (51.97%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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