Csor.00g018370 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g018370
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionkeratin, type II cytoskeletal 2 epidermal isoform X1
LocationCsor_Chr09: 9525887 .. 9532120 (+)
RNA-Seq ExpressionCsor.00g018370
SyntenyCsor.00g018370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGGAAGCAGACACGAAGGCGGAGAAGATGAGAGCGGAATGCTGTGGAAGCTTCCAGTTTTGAAATCTTCCAGAATCGGAAGGTTAGGTCCCGCCTTCGGCCTCGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGTCGGAGGTTAATTCTTCATCCTTTCTCTCTTTCCTTTTTGTTTCAGTTGGATTCCTTTTGTTTTACTACTTCAATTATGTTGTTAAAATCAATTAGATTAGCGGAATCACTTTGTTTAGTGCGTATTAATCTTTGGTGAATTGAAAATTTGCCTTATGGATTGTGTTTTACGCTGCAATTTGCTGATTGCTTTAGTCGGAGGTATGCTTGTTGAATCAGAGATTAAACAAGCATTTCTTCATCATTTGTCTTTTTCCTTTTTGTTTCAGTCGTAACTCGCTTGTTATTCCTCTGTTGGATTCCTTTCGTTTTACTACTTCAATTATGTTGCATAAAATCAATTTGATCAGCGGAATCACTTTGTTTAATGCGTATTAATCGACTACTTTGATGAGGCTTAGCTATTGGTGAATTGAAAATGTTGCCTTATGGATTGTGTTAACCCTGCAACTTGCTGATTGCTTTAGTCGGAGATATGCTTGTTGACTCAAAGATTGAGGTAGGTTGGGTGGGGTTATTCTGTCTGCAGTGTTTGTTTGGTTTAGGCTGATAATCGTTTCAAGATGATTTAATTGGTATTAGTGCCTTTTACCGTCTTTGACTTTTGTCCTTCAATATTACATGTTTCTTGCATTCTGGTTTAGAGAATATGGGTGTTTGGATTGTATGTACATTGCCACGCTTGCTGTTGAAATTCTTTAGCCCTATGATTTTTTCCCCAAGTCTAGGAAGCATTTGACCTTGTTTTGATGGACCAGACGCAGATCACAACATTTCTGTTTTTCCAAAAATTAATGATAGAAAGGTTCTATGGTTAAAATATATTTTAACACATTGCGACGTTTTATGAATGTTGAATTATGTTAAAGCTTAGACTTGAAGAAGGGAATGCTATGGATGAAATTCAGTTTGAAAATCACCAAAAGGAATAAAGTGTACTACAGAGCAAATAACTAATTTTCGTACAAAATAGCTAAAACATGAATCCCCAAGTAGGCCCAGATGTAGTTCATTCAGATTTCAGGTGGGTATCTTTTCATTTTCTTTATTAAGATCTTCTCTTGTCTGTTTTTCTTTATTTGCTTCTTCTGTTTCTTTTAGTTTATATGTTGTGTGCTTTAACATAATTTTTATTTTATTTTTGTCCTTTGCCGAGTGCAATGTATTTTTTATCTTTCAAGTGGAGAGAGGATGGTATGAGCGGTATACTTCTGCATGACTTATCTGCATATTGTGAACTATTTGTGCTTCATCTTTATTATTCAACAATTTAGACATGTCTTTTGATGGATACATTCGAGAAAATTAACTAAATGTGTATTAGTGGCTGTGGAATTTATGGACGCAACTTCTTCAAGCAGTTTATTGGGACGTAAGTGTTTTTTATGTGTATGTATGGTTGTAATCAACATCAGAGCTTTTACCATCCACACAAGTACATCACCCAACCCCGTTTTTTTTTCGTCTTTTCATTTTTTTTTAAGTCAGCATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTATATCTTTTTGTTAAATTATGGTGGCTCTCATGTTAGTCGGGAGGGTGGGTTTTGAATTTTATTTATCTCAACTTTGGACTCTACAAGCGGTACTTGGCTACATGTTTTAAACTCCATCAATCTGTTTAGAAGGATTTTTTGGTGCCTAAAGCTCAAAATGTATTAAGACTTCAAAAATTGGAATTCACATAGTACTTACACGTTGATGAGGAATAAATTCTCTCTATCCTTTATTATAGTATGATTTTTAGTATATAAGAAGATTTTATTTTTGATAGTAAACAATTTATGAATGAAAAAAAGAGGACAAAAGGAACTGGGAAGATAAAGCGTCTTCTGGGTCTCTCACATACACACTTGCGTGCACACATGCATAGAAGAGGAAACTATCATGGATTTGGGTTGTGGTAGAAGGTAGGGCTCGAGTGTCAGCTCATAAATGTTATCACTGTGCAAAATTTACTTTGAACCTTGAACTGTGGTGAACTATCCTTGTTTAATTTAAACTACTCAAATTGATGTATTTGCAAAATTTGTTCTCCATTCTAGGTGCTGGATTTGGTCCAGGAATTCCTGGCCTACAACTTGGCTTTGGTCTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGCTATGGTGCGGGCAGGGGCATTGCGCAAGATGACAAACGGAGATACTCTAACGTTGGGGATCTGTTAAATGGTCATCAAAGTATTTTTCCTCAGTAAGTTCTAAACTAACTGTTTTCAACTTGTGACTATCCTGTTCTGTTCCTGCATGCATTATTACAAGTCAGGGATAATTCCCATTTTAGTGCTTATCTAGATTTGGTGACCTGGCTTTTTCCTAACCATGTATTGACTAAGGTGGCAATTTTCCATGATGTAAATTCCAAAAAAATAACCCCAGTGACTCTCTTTCTCTCTCTACTTGCCTCCACACCTCCACCTCACCTTCATTGGAAACTATAATGGCCCAAGCCCACTACTAGCAGATATTGTTCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGAAAGGTTTCCACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACCACTGTGGGATAGCATAATCCACCCCCCTTCAGGGCCCTGCGTCCTCGTTGGCACTCGTTCTTTTCTCCAATCCATGTGGGATCCCCACCAAGTCCACCCCCTTCGGGGCCCAGCGTCCTTATTGGCACACCGCCTCGTGTCTACCCCCTTTGGGGAACAACTTCCTTGCTGGCACATCGCCCGGTGTTTGACTCTAATACCATTTGTAATGGCCCAAGTCCATCGCTAGTAGATATTGTTATCTTTGGGCTTTTCCTTTCGAACTTTAAAATGCGTTTGTTAGGGAAAGATTTCCACACCAACCAACGTGGGATATCACAGAAACCATGAACAACTTTCACTTAGCCACTGTACTAACCACCCATCCAATGAATAAGTGAACAGAGAAAGTCGATAGTAGATACAGAGGTAGTTGTGTTAAGTTTTCTGAGGTAAAGAGAGAGAAAGCTTGCTTCATAACCATCCATTGGAAATCTCTTCGATGTTGAGTTGATACCTTCCAAACCCTCCTAACTGCCCAAATGAATCATCAGAAAATTTTTAAGGAGGAATTATTGACAAACAAACTATTTGGTGCATAAATCATCAAACCAAAAGGGTAGACTTGCAACAGTTGCTTTCTTCAACATAACAAAGAAAGTCTCAACATACTTTTTATACCTGTAGGAGAAGAGAGAATAGGATGGGTAGTTTTTATAATTTTATTACCAACCACCCACCTGCTCCATCATTAACAACTAGTTATAAGCCAAAGCCCCCCCTCTTCTCCTGATCAGGAAGGCAACCGTTAAACCAACCGCACTTTGTCCCCTCCCCCGCAATCATTAAAAAACCCACCAACCTCCTACAAAGCGGCTTTGACTTGTAAGTTATCTCCTTATAATGTATTGATATTTAAAGGAAGAAATTGCCATAAGGCAATACAAAACTCTTCAGCTTATTTGAGAGGCCTGATAAACTCTCTTTCCTTACAACTTTCTAGAAAAGATAAAACATGAAAATTTCTACACCTTCTGTATCATACCTATATATGCTGCTTTTTACCCCAACATTTCCTTATAGTGATCCCACGGGTCCCCTCATCCTCTCTAACTCTCAGATGGTTTATTTCCTTTTTTGCCCCTTCTAACGTAAGTAAAATCAGGGTTCTCACATAACCACTTAAGTACAGTGTCCTGTATACATAATTGACATCCATCCTTTTGTTTTAGATGTTGGAGATCTATCCATCGTCATTAGTGGACAACACTTTCACTATGATTGGTTTTTGAAGCTATGTATGAGAGAAAATAATTTTTTACTTCTTGAGTGATGAGAAAGACTCAAACTTATGCAAGAGGATTACCTATCATATGTGCTAGAAATAAGCTATCAACCTAAACTTCTATGTAAAGAAAAACCTAAACTTCTGTCATCAAATCCCAAAGGTAAGCCATTTAAAAATGCATTCTTTACACCAAGTTGAAATGGTGGCAAATCTAGATTTGTTGCGATAGATAGAAGTACCCGAATAGTATTTCACTTGGCGTGTAGCAAAGATTTCCTGATAGCCAATCTAGATTTGTTGCAATAGAGATATGTAACTATGCTACTTCAATTTGGGGCTCTTTACTGGAGCTCAATATTTCCATGGCCCCTAATAAGTCTGGTGTAGCTCAATAGTTGAAGATGTGTTGTTCCATTCCCCTTCGAAGACAGCAGAGGTGTTTTGTTGAGGACTACCTTTTGAGTTGCTTTATGGAACATTTAGCGGGAGAGAAACAAATGGATTTTTAAGGAGTAGAGGGTGTGTTGGAGGAAGCTCTCTCTTATAGCCAGCTTCTGTAACCAAATGGTTTAATTTCTTCTTTCTTTCTTTTTCTTAACCTTTGGAGACCTTTATTCTGGGGCGGGGCTCATTTGACTTGCCAATGCATTGCACAGAACTCTCCCTGCCGCCTGTTATGCCTGGTCTAAACCGACTGTTATGCCTGACCCTGAAAAGAAATTTAGCTCATCTAAATTAAACAATTTAGCCTTTTATCATAAGAGATTTTGGATCACGTGCATTGGAAATGTAAATATACTACTATAATTTGGGCTCTCTTCTTGAGGGAGACCTTCAATATTTCCATGGCCCCAATCGCCCCAACGTTAGGAATCACGACTCTTCTTAATGATATGATATTGTTCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGAGCTTCCTCAAAAGGCCTGATACCAATGGAGATATACAACAATCCTCAACACCCAATATAAGTCTCGTGCTGCTCAATTGTTGAAGAGGTGCTGTTCCATTTGCCTTCTTAGACAACCGAGGTGTTTTGTTGAGGATTGCCTTTCTTATGGAACATTTAGCTGGAGAGAAACAAATGGATTCTTAGGAAGGGGGTGTTGGGGGAAGTTTTCTCTTTAGCCAGCTTCAATGGGTGTCTGTAAGCAAAGAGTTTACATTCTTTCATTTCTTTTATGAAAGAAAAACAGTTTCATTGGAATGGTAGATGAAACAGTGGAGTAAAAGCTCCAAACAACTAGAGGTGAATTACAAGGGAAAAAAAACTCTCCAATGGGCGATGAAATGAATAAGCTATTATGATAGAAAAGAAAGTACTTATTCTTGCACCAGAAGGCAGTAGAAAGAACAAGTTCTATGAAATGGTCAAAAGAGTAGGAAAAATCCCCGTGAAAAAAAAAAACTCATATTTTTGTAACCTTTAAAAAATATCTCGAAACCCGGGTAATATTACAACTTTGAAAGAGAGAGTATTTTTTAAAGAAAGGGCAAGGCTCAAGTGTTCTTCGTAATTTAGTCTCTTTTCTTTTATCTTATTCACGGACTGTGGATAAAACCCCTACTTTTGAAGCTCTTGAAAGCAATTGTGTGCTAGTGAGATGCACATTTGATACTCAGCTTGCTTTATGGTGCTACCTACAATGTGTGCTAGCCGCTGAGGTTGATTTCCATGGTTTTTTTCCGCACAAATTCCTAGCACCCTTCTATTTCTTGTTCCTGATCGACTTGGGGGACGCTATCTTGGCCACGTCAATTGTTTTGGTTAAATCATTGAAACTAACCGTTGATTGTCGAGATCGTTGAACTATGATTAGGATAATAATTCCCTTTTGAAATCATCCTCTTGAGTTGAAACACAGGATTAAGAATGATTTTCTCAGCTGAAATAACTGGAATCCAAACAATCAGTGAAGCTAGAATACAACTGGTGGCATTTCCAAGATGGCTTGAACTGTCTTTATTCGCCTTTTTCATATGTAATCTGTGCAGCTATAGAAGAACTTTTATTATTCTGTCATCAAGAAACATTTCTTGACTTCCATTTTTACTTATCAGTAGGGACGAGATCGGCGCGCTTGTCGACGAGCTCGCCCTCAATACAAAGAAGCTTATCCGAGTTACTGCAAGGGAGATTGACAAGTGGAAAAGATGA

mRNA sequence

ATGAACGGAAGCAGACACGAAGGCGGAGAAGATGAGAGCGGAATGCTGTGGAAGCTTCCAGTTTTGAAATCTTCCAGAATCGGAAGGTTAGGTCCCGCCTTCGGCCTCGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGTCGGAGGTGCTGGATTTGGTCCAGGAATTCCTGGCCTACAACTTGGCTTTGGTCTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGCTATGGTGCGGGCAGGGGCATTGCGCAAGATGACAAACGGAGATACTCTAACGTTGGGGATCTGTTAAATGGTCATCAAAGTATTTTTCCTCAGGACGAGATCGGCGCGCTTGTCGACGAGCTCGCCCTCAATACAAAGAAGCTTATCCGAGTTACTGCAAGGGAGATTGACAAGTGGAAAAGATGA

Coding sequence (CDS)

ATGAACGGAAGCAGACACGAAGGCGGAGAAGATGAGAGCGGAATGCTGTGGAAGCTTCCAGTTTTGAAATCTTCCAGAATCGGAAGGTTAGGTCCCGCCTTCGGCCTCGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGTCGGAGGTGCTGGATTTGGTCCAGGAATTCCTGGCCTACAACTTGGCTTTGGTCTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGCTATGGTGCGGGCAGGGGCATTGCGCAAGATGACAAACGGAGATACTCTAACGTTGGGGATCTGTTAAATGGTCATCAAAGTATTTTTCCTCAGGACGAGATCGGCGCGCTTGTCGACGAGCTCGCCCTCAATACAAAGAAGCTTATCCGAGTTACTGCAAGGGAGATTGACAAGTGGAAAAGATGA

Protein sequence

MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPQDEIGALVDELALNTKKLIRVTAREIDKWKR
Homology
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BLAST of Csor.00g018370 vs. NCBI nr
Match: KAG6592270.1 (hypothetical protein SDJN03_14616, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273 bits (699), Expect = 1.89e-92
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0 

Query: 1   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 1   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60

Query: 61  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPQDEIGALVDELA 120
           LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPQDEIGALVDELA
Sbjct: 61  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPQDEIGALVDELA 120

Query: 121 LNTKKLIRVTAREIDKWKR 139
           LNTKKLIRVTAREIDKWKR
Sbjct: 121 LNTKKLIRVTAREIDKWKR 139

[Close]
BLAST of Csor.00g018370 vs. NCBI nr
Match: XP_023521209.1 (fibroin heavy chain isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270 bits (691), Expect = 3.59e-91
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNGSRHEG EDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGSRHEGREDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPQDEIGALVDELA 120
           LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPQDEIGALVDELA
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPQDEIGALVDELA 124

Query: 121 LNTKKLIRVTAREIDKWKR 139
           LNTKKLIRVTAREIDKWKR
Sbjct: 125 LNTKKLIRVTAREIDKWKR 143

[Close]
BLAST of Csor.00g018370 vs. NCBI nr
Match: XP_022932820.1 (keratin, type II cytoskeletal 2 epidermal isoform X2 [Cucurbita moschata])

HSP 1 Score: 269 bits (687), Expect = 1.46e-90
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPQDEIGALVDELA 120
           LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNG QSIFPQDEIGALVDELA
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPQDEIGALVDELA 124

Query: 121 LNTKKLIRVTAREIDKWKR 139
           LNTKKLIRVTA+EIDKWKR
Sbjct: 125 LNTKKLIRVTAQEIDKWKR 143

[Close]
BLAST of Csor.00g018370 vs. NCBI nr
Match: XP_023521208.1 (ATP-dependent RNA helicase glh-2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264 bits (675), Expect = 1.02e-88
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0 

Query: 1   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNGSRHEG EDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGSRHEGREDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFP-QDEIGALVDEL 120
           LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFP +DEIGALVDEL
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPHRDEIGALVDEL 124

Query: 121 ALNTKKLIRVTAREIDKWKR 139
           ALNTKKLIRVTAREIDKWKR
Sbjct: 125 ALNTKKLIRVTAREIDKWKR 144

[Close]
BLAST of Csor.00g018370 vs. NCBI nr
Match: XP_022974026.1 (keratin, type II cytoskeletal 3 isoform X2 [Cucurbita maxima])

HSP 1 Score: 263 bits (673), Expect = 2.00e-88
Identity = 134/139 (96.40%), Postives = 137/139 (98.56%), Query Frame = 0 

Query: 1   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNGSR EGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGSRREGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPQDEIGALVDELA 120
           LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNG QSIFPQDEIGA+VDELA
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPQDEIGAVVDELA 124

Query: 121 LNTKKLIRVTAREIDKWKR 139
           LNTKKLI+VTA+EIDKWKR
Sbjct: 125 LNTKKLIQVTAKEIDKWKR 143

[Close]
BLAST of Csor.00g018370 vs. ExPASy TrEMBL
Match: A0A6J1F360 (keratin, type II cytoskeletal 2 epidermal isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439279 PE=4 SV=1)

HSP 1 Score: 269 bits (687), Expect = 7.08e-91
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPQDEIGALVDELA 120
           LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNG QSIFPQDEIGALVDELA
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPQDEIGALVDELA 124

Query: 121 LNTKKLIRVTAREIDKWKR 139
           LNTKKLIRVTA+EIDKWKR
Sbjct: 125 LNTKKLIRVTAQEIDKWKR 143

[Close]
BLAST of Csor.00g018370 vs. ExPASy TrEMBL
Match: A0A6J1IA95 (keratin, type II cytoskeletal 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472645 PE=4 SV=1)

HSP 1 Score: 263 bits (673), Expect = 9.66e-89
Identity = 134/139 (96.40%), Postives = 137/139 (98.56%), Query Frame = 0 

Query: 1   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNGSR EGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGSRREGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPQDEIGALVDELA 120
           LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNG QSIFPQDEIGA+VDELA
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPQDEIGAVVDELA 124

Query: 121 LNTKKLIRVTAREIDKWKR 139
           LNTKKLI+VTA+EIDKWKR
Sbjct: 125 LNTKKLIQVTAKEIDKWKR 143

[Close]
BLAST of Csor.00g018370 vs. ExPASy TrEMBL
Match: A0A6J1EY31 (keratin, type II cytoskeletal 2 epidermal isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439279 PE=4 SV=1)

HSP 1 Score: 263 bits (671), Expect = 2.02e-88
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0 

Query: 1   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFP-QDEIGALVDEL 120
           LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNG QSIFP +DEIGALVDEL
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPHRDEIGALVDEL 124

Query: 121 ALNTKKLIRVTAREIDKWKR 139
           ALNTKKLIRVTA+EIDKWKR
Sbjct: 125 ALNTKKLIRVTAQEIDKWKR 144

[Close]
BLAST of Csor.00g018370 vs. ExPASy TrEMBL
Match: A0A6J1ICW2 (keratin, type II cytoskeletal 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472645 PE=4 SV=1)

HSP 1 Score: 257 bits (657), Expect = 2.75e-86
Identity = 133/140 (95.00%), Postives = 137/140 (97.86%), Query Frame = 0 

Query: 1   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNGSR EGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGSRREGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFP-QDEIGALVDEL 120
           LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNG QSIFP +DEIGA+VDEL
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPHRDEIGAVVDEL 124

Query: 121 ALNTKKLIRVTAREIDKWKR 139
           ALNTKKLI+VTA+EIDKWKR
Sbjct: 125 ALNTKKLIQVTAKEIDKWKR 144

[Close]
BLAST of Csor.00g018370 vs. ExPASy TrEMBL
Match: A0A1S4E347 (glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103498610 PE=4 SV=1)

HSP 1 Score: 239 bits (610), Expect = 4.03e-79
Identity = 121/140 (86.43%), Postives = 129/140 (92.14%), Query Frame = 0 

Query: 1   MNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 60
           MNG+R+  GEDE G+LW LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG
Sbjct: 5   MNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPG 64

Query: 61  LQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFP-QDEIGALVDEL 120
           LQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGD+L GHQSIFP QD+IGALVD+L
Sbjct: 65  LQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFPHQDDIGALVDDL 124

Query: 121 ALNTKKLIRVTAREIDKWKR 139
            LNTK+LIR T+REIDKWKR
Sbjct: 125 VLNTKRLIRATSREIDKWKR 144

[Close]
BLAST of Csor.00g018370 vs. TAIR 10
Match: AT4G10330.1 (glycine-rich protein )

HSP 1 Score: 157.1 bits (396), Expect = 1.0e-38
Identity = 76/134 (56.72%), Postives = 96/134 (71.64%), Query Frame = 0 

Query: 4   SRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQL 63
           +R   G+D+ G+LWKLP ++   IG++GPAFGLGVGCG GFG GL+GG GFGPG+PGLQ 
Sbjct: 3   NRRRTGDDDKGLLWKLPQVRIRDIGKVGPAFGLGVGCGFGFGAGLIGGVGFGPGVPGLQF 62

Query: 64  GFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPQDEIGALVDELALNT 123
           G G GAGCG+G+GFGYG GRG A D  R Y NVG            +E+ +L+DEL ++T
Sbjct: 63  GLGFGAGCGIGVGFGYGVGRGAAYDHSRSYYNVGKP--------SLNEVDSLIDELVVST 122

Query: 124 KKLIRVTAREIDKW 138
           KKL++ T  EIDKW
Sbjct: 123 KKLVKATTNEIDKW 128

[Close]
BLAST of Csor.00g018370 vs. TAIR 10
Match: AT1G66820.1 (glycine-rich protein )

HSP 1 Score: 52.8 bits (125), Expect = 2.6e-07
Identity = 35/70 (50.00%), Postives = 42/70 (60.00%), Query Frame = 0 

Query: 30  LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQ-----LGFGLGAGCGVGLGFGYGAGRG 89
           +GP  G G+GCG G GIGL GG G G    GL      LGFG+G G G G G+G+G G G
Sbjct: 39  VGPGIGGGIGCGAGIGIGLSGGLGIGAS-EGLDHSNVVLGFGIGCGIGFGFGYGFGVGGG 98

Query: 90  IAQDD-KRRY 94
            + DD K R+
Sbjct: 99  YSFDDIKERF 107

The following BLAST results are available for this feature:
BLAST of Csor.00g018370 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g018370 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6592270.11.89e-92100.00hypothetical protein SDJN03_14616, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023521209.13.59e-9199.28fibroin heavy chain isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022932820.11.46e-9098.56keratin, type II cytoskeletal 2 epidermal isoform X2 [Cucurbita moschata][more]
XP_023521208.11.02e-8897.86ATP-dependent RNA helicase glh-2 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022974026.12.00e-8896.40keratin, type II cytoskeletal 3 isoform X2 [Cucurbita maxima][more]
BLAST of Csor.00g018370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F3607.08e-9198.56keratin, type II cytoskeletal 2 epidermal isoform X2 OS=Cucurbita moschata OX=36... [more]
A0A6J1IA959.66e-8996.40keratin, type II cytoskeletal 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1EY312.02e-8897.14keratin, type II cytoskeletal 2 epidermal isoform X1 OS=Cucurbita moschata OX=36... [more]
A0A6J1ICW22.75e-8695.00keratin, type II cytoskeletal 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A1S4E3474.03e-7986.43glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103498... [more]
BLAST of Csor.00g018370 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G10330.11.0e-3856.72glycine-rich protein [more]
AT1G66820.12.6e-0750.00glycine-rich protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34201:SF1GLYCINE-RICH PROTEINcoord: 1..139
NoneNo IPR availablePANTHERPTHR34201GLYCINE-RICH PROTEINcoord: 1..139

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g018370.m01Csor.00g018370.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane