Csor.00g017590 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g017590
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	GDT1 family protein
Location	Csor_Chr05: 4560009 .. 4563838 (+)
RNA-Seq Expression	Csor.00g017590
Synteny	Csor.00g017590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTGCGCTCAAACCCTACGGGAAACCTCTCTTTTTCTCCTTCTTTGATCCTCCTCCTGCTTCTTGTTTCTCTGTTTGCCTCCGTTCAGGTATTCATCTCGCATTTCTCTACCTTTAATTTTTTGGTCTTTTCTGCGTTCTTATGGGGGTTTGGTTTGTAATTTTTGTTCGGTGCTTTCAGGTGTTTTCTGCGGAAGTGGAGAAAGAGGAGTTGGATGTACCTAAAGATCTCGGTCGACGTAGCAAGGTGAGTACGATTCCTTGTCTTTCTTGTTTTACTTTGGATGAAGCTATTTTATGAAATTATTGGTGGGCTGTGAGGCTGTGAGGCTGCGATGCCGGCCATGGCAGGACGGGAGGGGGTTTGGGGGTTATTGGGATTGAGATCTTTGCGCTTTTTAACATAATTGTTTTCCTTTTACATTGTAAGTAGAACTAACTATTTTGAGTAATGATTCTCTTGCCTTGTATGGGGTATCTTGTGGAACATAACATGCCATTCTGTAAAGAAATTTGAGATTAAGATGCGTTGTCCCAATTTATCATTTCCCTTTTTCTTTTCTTCTTTAATCTCTAGTTTTATTTCTTTCATGATGTTATTATCGTCTGTATTTCCTCTCATTAGATTTCCTGGAACAACGTTGACACAATTGCTGCAAAAAAGGATGTTGTTGACTCAGAAGATCTTAATCTTGACCTGGACTCCGTTGGTCTTGGAGTTTTTGACGCATTTTTTGCTAGTTTGTCCATGATAATTGTCAGTGAGGTTGGTGTTGTTATTTCTATTCTCATTTGTACTTTCTGTGAAAAATTTCAGTAGAATTGTGTCCATTCCCGATATGCGTTTGGGTGTATTACTGCGGTATCAGTTCAATTGAATTACCAACATGAACTGAAGAGACGAAAAGATGGGAAACGGGAAATATGGTGGTTTTGGACCTAACTGCTTGTTTCTTCAAGTTCGATTCCTTTAATTTTTTCTAGAATGAATGTGTGTAGATTGGAGATGAGACGTTTATAATAGCTGCACTTATGGCTATGCGCCACCCGAAGTCCATTGTATTATCTGGTGCGCTCAGTGCCCTGATTGTAATGACAGTAAGTTGATCAGATCTTTCATTTTCATCAGGTTCCAAGTCCAAGTTCTTTCTCTGGTGAATAAGAGTAGAACTATTTCCATGTCAATTAGGTACTCTCGACTGGATTAGGTAGGATAGTGCCGAATTTGATATCAAGGAAACATACCAATAATGCTGCTACAGGTACATACATATTATTTTACACTCTTTGGAGTATATCTATTTGTAGAGTACTGTATGATCTTATTCATTCTATTTGACTCTGACTATCTTTTCTAATATATATTTCCTGATTAACCGTTACGTCCTGATTCCCTGCTGTTGTCACTTGACACTTCTCCCTTCGCTGTAATGAAGAGGAAAAAAAAAAAGGAAATCTTAAAGATCCTCCAAGGTTTAATGGTATCTATACGTATAAAAGTAAATAAACAAAACGTATACAGATAGAAAGAAAAAGATGGATTGCATACAAAATCTTGACTTTAAAGTTATCTACCTAGGCTTGCTACCAAGAAAAAAAGTCTCCTAAAAGCATCTATACCGCTAAGGAAGGAAAGAGTTGAATCGCAGACTTACGAATCACTAATATCCCTACCACCTGTAGCAGTAAGAAAGAGTTTGGAGGTGAATCGCAAGTGGCGATTTTGTAATCGGAGTCTGACCAAACAATATGGGTTATTGATGTAGCTTCATTGCAACCAAAAAGAATTGACCTAAATTAAATTGGTTAATATTTTCAATATCTCGACTTCAAGATTATGTACGACCATGAATATACATATGTTTGATTTATGTACGAGAAATTTATAGGCAGCTACTTCTCTGATGAAAATGCAATCTAGAGTTTTGGGTTCATGTTTTTTTTCCTCGTAGGAGGTGGTACGACTACTTTAGCTAAACCTCCCATATTTTAAGGTATTTGTAGGAAGGCATTCCACTTCTTTGACTCCTAAGGTACTTAACCAATTTTCTAATGATGGATTTATCTAATCCAATATTTTAAATTAATCAATTAAATAACTGAGCCACAGTGCCATACTGGTTTGACATTAAGGAAAACCTTTAGGAGTGATGAATTTATGCCATGGTGAAGATAAAACTTTAGGAGTGATGAATCACTTAAACAACATAATTACAAGCGTCGGAAGGTTTTATCTGTTGTCTTTTGATCCTGCATTTCACATATTAGATATGACTTGATGCATCACTTCAACAACTTTTGCTTGTCATTTTGGGATGTTGTAATGGTACCTTCTTTCCAGAGGATGAGACGACATTTATTATTTTACCTGTTAAACGTGACTCTTCTGTCTAAGTTGTGTACTTTTGCTAGAGTTTTCATAGTTGTTTGTTTTTTCCTATAGTGATGTCCGCCTACATATTTATAATTCTGCAGTTCTGTATGCATTTTTTGGATTGCGGTTACTTTACATTGCTTGGAGATCCAAAGCAGACTCAAAATCTTCAACGAAAAAGGAAATGGAAGAAGTATGATATCTTCAACACCTTTTCAGTTTGATGCTTGTTTAACTTTATTTTGTTTGATTCTTGCCTGCATTTTTCTTTGTTGTCTGGCATAGTTTCTTAATCTTGAAGTTTTTTGTTTCAATTGGAATTTCGTGATAAAAGATTCGGTGATTCACGATCTATGGCATGAAGATGATCATAATACAGATGTCTTTGGTAGTTTATATTTTCCCCCGGTTTTATTACATTTATTTGAGGCTTTTATCTGTTATTTAATAATGAAGATATATGGTGAAAACGGATAAATAGTTATCTGTTCTTTTTCGATTTGGATTTTTAAATTTTTATTTTCTACACCTTATATTTTTTTGGAGTCATTCTGAATATTGTTGTTTATGTCTTTTATGTCTTGAGTGATTCAATATACCTATATTTCATCTGTCCCCATATTGTTATCTCATTTCCTAAGAAAACTTGTGGCCGTTTTAGCCTTTCCTTGTGCTAGTTCTTTAAATGGTTGACTTCTAAAAATCACGTGTTCAGGTAGAGGAGAAACTCGAGGCTGGACAATCCAAGACGACCTTTCGCCGCTTCTTTCTCCGATTTTGCACACCCATATTCTTGGAGGTCCACAAATCTCTATATCACTGATTTGGCATAAAACTATCAATATTGTTCTTTTCTTTTTTCTTTCTGACTTCTTCCATTAGTGTAAATATTTGTGTTATTCAGATGCATATAATTTTCCATATATGTCATTCCTTAGCTGATTCTCGAAATTACTTTGGCTTTTGCAGTCATTTATTTTAACCTTCCTTGCCGAATGGGGAGATCGAAGTCAGATAGCAACAATTGCTGTAAGTTCTTTCATAAAATTGTATGTTTGGTTTGCTTGATATCATCTAGTTGGTACTGGAAGTTGGATTGAACCATGGTTTCAATAGTTTTATATTCTAGAAGCGAGATCTATAACACGAGAATCTGAATTGGTTTCGATACTCGAAATAAGTGACTTCAGAATGTTTAAGATATGAAAAATGAAGAAGAATTTAAGGCATACAAACCTAATGGGGGAGGGGCGTGTATTGCAGCTAGCAACACACAAGAATGCACTTGGAGTGGCTGTGGGAGCCATCTTGGGGCATTCAGTTTGCACATCAATGGCAGTGATCGGTGGAAGCATGTTGGCATCGAAGATATCACAGGGCACAGTTGCAACAGTTGGAGGCTTGCTCTTCCTTGGCTTCTCCTTGTCTTCCTATTTTTTCCCACCTCTATAA

mRNA sequence

ATGGGTTTGCGCTCAAACCCTACGGGAAACCTCTCTTTTTCTCCTTCTTTGATCCTCCTCCTGCTTCTTGTTTCTCTGTTTGCCTCCGTTCAGGTGTTTTCTGCGGAAGTGGAGAAAGAGGAGTTGGATGTACCTAAAGATCTCGGTCGACGTAGCAAGATTTCCTGGAACAACGTTGACACAATTGCTGCAAAAAAGGATGTTGTTGACTCAGAAGATCTTAATCTTGACCTGGACTCCGTTGGTCTTGGAGTTTTTGACGCATTTTTTGCTAGTTTGTCCATGATAATTGTCAGTGAGATTGGAGATGAGACGTTTATAATAGCTGCACTTATGGCTATGCGCCACCCGAAGTCCATTGTATTATCTGGTGCGCTCAGTGCCCTGATTGTAATGACAGTACTCTCGACTGGATTAGGTAGGATAGTGCCGAATTTGATATCAAGGAAACATACCAATAATGCTGCTACAGTTCTGTATGCATTTTTTGGATTGCGGTTACTTTACATTGCTTGGAGATCCAAAGCAGACTCAAAATCTTCAACGAAAAAGGAAATGGAAGAAGTAGAGGAGAAACTCGAGGCTGGACAATCCAAGACGACCTTTCGCCGCTTCTTTCTCCGATTTTGCACACCCATATTCTTGGAGTCATTTATTTTAACCTTCCTTGCCGAATGGGGAGATCGAAGTCAGATAGCAACAATTGCTCTAGCAACACACAAGAATGCACTTGGAGTGGCTGTGGGAGCCATCTTGGGGCATTCAGTTTGCACATCAATGGCAGTGATCGGTGGAAGCATGTTGGCATCGAAGATATCACAGGGCACAGTTGCAACAGTTGGAGGCTTGCTCTTCCTTGGCTTCTCCTTGTCTTCCTATTTTTTCCCACCTCTATAA

Coding sequence (CDS)

ATGGGTTTGCGCTCAAACCCTACGGGAAACCTCTCTTTTTCTCCTTCTTTGATCCTCCTCCTGCTTCTTGTTTCTCTGTTTGCCTCCGTTCAGGTGTTTTCTGCGGAAGTGGAGAAAGAGGAGTTGGATGTACCTAAAGATCTCGGTCGACGTAGCAAGATTTCCTGGAACAACGTTGACACAATTGCTGCAAAAAAGGATGTTGTTGACTCAGAAGATCTTAATCTTGACCTGGACTCCGTTGGTCTTGGAGTTTTTGACGCATTTTTTGCTAGTTTGTCCATGATAATTGTCAGTGAGATTGGAGATGAGACGTTTATAATAGCTGCACTTATGGCTATGCGCCACCCGAAGTCCATTGTATTATCTGGTGCGCTCAGTGCCCTGATTGTAATGACAGTACTCTCGACTGGATTAGGTAGGATAGTGCCGAATTTGATATCAAGGAAACATACCAATAATGCTGCTACAGTTCTGTATGCATTTTTTGGATTGCGGTTACTTTACATTGCTTGGAGATCCAAAGCAGACTCAAAATCTTCAACGAAAAAGGAAATGGAAGAAGTAGAGGAGAAACTCGAGGCTGGACAATCCAAGACGACCTTTCGCCGCTTCTTTCTCCGATTTTGCACACCCATATTCTTGGAGTCATTTATTTTAACCTTCCTTGCCGAATGGGGAGATCGAAGTCAGATAGCAACAATTGCTCTAGCAACACACAAGAATGCACTTGGAGTGGCTGTGGGAGCCATCTTGGGGCATTCAGTTTGCACATCAATGGCAGTGATCGGTGGAAGCATGTTGGCATCGAAGATATCACAGGGCACAGTTGCAACAGTTGGAGGCTTGCTCTTCCTTGGCTTCTCCTTGTCTTCCTATTTTTTCCCACCTCTATAA

Protein sequence

MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVDTIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL

Homology

[Close]

BLAST of Csor.00g017590 vs. ExPASy Swiss-Prot
Match: Q93Y38 (GDT1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g36290 PE=2 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 4.5e-102
Identity = 214/304 (70.39%), Postives = 242/304 (79.61%), Query Frame = 0


Query: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVP----KDLGRRSKISW 60
           MGL SNPT        LIL+  +  L +S+    + VE  E        K+LGRR  +  
Sbjct: 1   MGLISNPT-------RLILVATIFFLVSSISGQDSVVENNERQESEGSGKELGRRGMVGT 60

Query: 61  N--NVDTIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAM 120
               VDT+    D + +  LNLDLD+    VFDA F+S SMI+V+EIGDETFIIAALMAM
Sbjct: 61  ERIGVDTVV---DNIGALGLNLDLDATAPSVFDALFSSFSMILVTEIGDETFIIAALMAM 120

Query: 121 RHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRS 180
           RHPK+ VLSGALSAL VMT+LSTGLGRIVPNLISRKHTN+AATVLYAFFGLRLLYIAWRS
Sbjct: 121 RHPKATVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRS 180

Query: 181 KADSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIAT 240
             DSKS+ KKEMEEVEEKLE+GQ KT FRR F RFCTPIFLESFILTFLAEWGDRSQIAT
Sbjct: 181 -TDSKSNQKKEMEEVEEKLESGQGKTPFRRLFSRFCTPIFLESFILTFLAEWGDRSQIAT 240

Query: 241 IALATHKNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYF 299
           IALATHKNA+GVA+GA +GH+VCTS+AV+GGSMLAS+ISQ TVATVGGLLFLGFS+SSYF
Sbjct: 241 IALATHKNAIGVAIGASIGHTVCTSLAVVGGSMLASRISQRTVATVGGLLFLGFSVSSYF 293

[Close]

BLAST of Csor.00g017590 vs. ExPASy Swiss-Prot
Match: Q6ZIB9 (GDT1-like protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0528500 PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.3e-100
Identity = 206/279 (73.84%), Postives = 232/279 (83.15%), Query Frame = 0


Query: 20  LLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVDTIAAKKDVVDSEDLNLDLD 79
           LLLL+ L A+    +A  ++E+     D G         +   AA+     S+     ++
Sbjct: 10  LLLLLLLVAAAAAAAAAGDQEDPRGGGDNGTARLDRRTKMFLHAARA----SDGGATGME 69

Query: 80  SVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGL 139
             GLG+FDAFFASLSMI+VSEIGDETFIIAALMAMRHPKS VLSGALSAL+VMT+LSTGL
Sbjct: 70  KAGLGLFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSTVLSGALSALVVMTILSTGL 129

Query: 140 GRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKSSTKKEMEEVEEKLEAGQSK 199
           GRIVPNLISRKHTN+AATVLYAFFGLRLLYIAWRS  DSK+S KKE+EEVEEKLEAGQ K
Sbjct: 130 GRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRS--DSKASQKKEIEEVEEKLEAGQGK 189

Query: 200 TTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGAILGHSVCTS 259
           +TFRR F RFCTPIFLESF+LTFLAEWGDRSQIATIALATHKNA+GVAVGA LGH++CTS
Sbjct: 190 STFRRIFSRFCTPIFLESFVLTFLAEWGDRSQIATIALATHKNAVGVAVGATLGHTICTS 249

Query: 260 MAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
            AV+GGSMLASKISQGTVAT+GGLLFLGFSLSSYF+PPL
Sbjct: 250 FAVVGGSMLASKISQGTVATIGGLLFLGFSLSSYFYPPL 282

[Close]

BLAST of Csor.00g017590 vs. ExPASy Swiss-Prot
Match: A2YXC7 (GDT1-like protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_29993 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 4.3e-100
Identity = 210/283 (74.20%), Postives = 236/283 (83.39%), Query Frame = 0


Query: 17  LILLLLLVSLFASVQVFSAEVEKEELD-VPKDLGRRSKISWNNVDTIAAKKDVVDSEDLN 76
           L+LLLLLV+  A+      E  +   D     L RR+K+  +     AA+     S+   
Sbjct: 10  LLLLLLLVAAAAAAAAGDQEDPRGGGDNGTARLDRRTKMFLH-----AARA----SDGGA 69

Query: 77  LDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALSALIVMTVL 136
             ++  GLG+FDAFFASLSMI+VSEIGDETFIIAALMAMRHPKS VLSGALSAL+VMT+L
Sbjct: 70  TGMEKAGLGLFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSTVLSGALSALVVMTIL 129

Query: 137 STGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKSSTKKEMEEVEEKLEA 196
           STGLGRIVPNLISRKHTN+AATVLYAFFGLRLLYIAWRS  DSK+S KKE+EEVEEKLEA
Sbjct: 130 STGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRS--DSKASQKKEIEEVEEKLEA 189

Query: 197 GQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGAILGHS 256
           GQ K+TFRR F RFCTPIFLESF+LTFLAEWGDRSQIATIALATHKNA+GVAVGA LGH+
Sbjct: 190 GQGKSTFRRIFSRFCTPIFLESFVLTFLAEWGDRSQIATIALATHKNAVGVAVGATLGHT 249

Query: 257 VCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
           +CTS AV+GGSMLASKISQGTVAT+GGLLFLGFSLSSYF+PPL
Sbjct: 250 ICTSFAVVGGSMLASKISQGTVATIGGLLFLGFSLSSYFYPPL 281

[Close]

BLAST of Csor.00g017590 vs. ExPASy Swiss-Prot
Match: A2ZE50 (GDT1-like protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_36063 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 5.6e-100
Identity = 210/285 (73.68%), Postives = 237/285 (83.16%), Query Frame = 0


Query: 14  SPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVDTIAAKKDVVDSED 73
           +P L++LL+L++  A+V V  AE  +        LGRR+    + +     KK+ V   D
Sbjct: 4   NPRLLILLVLLAFSATVAV--AEDGESTGGSKVSLGRRAGGFLHGL-----KKEAVVEGD 63

Query: 74  LNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALSALIVMT 133
             + LD VG G+FDA FASLSMI+VSEIGDETFIIAALMAMRHPKSIVLSGALSAL VMT
Sbjct: 64  HGVALDEVGPGLFDALFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALYVMT 123

Query: 134 VLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKSSTKKEMEEVEEKL 193
           VLSTGLGRIVPNLISRKHTN+AATVLY FFGLRLLYIAW  K+D K S KKEMEEVEEKL
Sbjct: 124 VLSTGLGRIVPNLISRKHTNSAATVLYLFFGLRLLYIAW--KSDPKGSQKKEMEEVEEKL 183

Query: 194 EAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGAILG 253
           E+GQ K+T RRFF RFCTPIFLE+FILTFLAEWGDRSQIATIALATHKNA+GVAVGA LG
Sbjct: 184 ESGQGKSTLRRFFGRFCTPIFLEAFILTFLAEWGDRSQIATIALATHKNAIGVAVGASLG 243

Query: 254 HSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
           H+VCTS+AVIGGSMLASKISQ TVAT+GG+LFLGFS+SSYF+PPL
Sbjct: 244 HTVCTSLAVIGGSMLASKISQRTVATIGGVLFLGFSVSSYFYPPL 279

[Close]

BLAST of Csor.00g017590 vs. ExPASy Swiss-Prot
Match: Q2R4J1 (GDT1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0472500 PE=2 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 5.6e-100
Identity = 210/285 (73.68%), Postives = 237/285 (83.16%), Query Frame = 0


Query: 14  SPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVDTIAAKKDVVDSED 73
           +P L++LL+L++  A+V V  AE  +        LGRR+    + +     KK+ V   D
Sbjct: 4   NPRLLILLVLLAFSATVAV--AEDGESTGGSKVSLGRRAGGFLHGL-----KKEAVVEGD 63

Query: 74  LNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALSALIVMT 133
             + LD VG G+FDA FASLSMI+VSEIGDETFIIAALMAMRHPKSIVLSGALSAL VMT
Sbjct: 64  HGVALDEVGPGLFDALFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALYVMT 123

Query: 134 VLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKSSTKKEMEEVEEKL 193
           VLSTGLGRIVPNLISRKHTN+AATVLY FFGLRLLYIAW  K+D K S KKEMEEVEEKL
Sbjct: 124 VLSTGLGRIVPNLISRKHTNSAATVLYLFFGLRLLYIAW--KSDPKGSQKKEMEEVEEKL 183

Query: 194 EAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGAILG 253
           E+GQ K+T RRFF RFCTPIFLE+FILTFLAEWGDRSQIATIALATHKNA+GVAVGA LG
Sbjct: 184 ESGQGKSTLRRFFGRFCTPIFLEAFILTFLAEWGDRSQIATIALATHKNAIGVAVGASLG 243

Query: 254 HSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 299
           H+VCTS+AVIGGSMLASKISQ TVAT+GG+LFLGFS+SSYF+PPL
Sbjct: 244 HTVCTSLAVIGGSMLASKISQRTVATIGGVLFLGFSVSSYFYPPL 279

[Close]

BLAST of Csor.00g017590 vs. NCBI nr
Match: KAG6598935.1 (GDT1-like protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 550 bits (1418), Expect = 8.55e-197
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60
           MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD
Sbjct: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60

Query: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180
           VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS
Sbjct: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180

Query: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298
           KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298

[Close]

BLAST of Csor.00g017590 vs. NCBI nr
Match: XP_022929759.1 (putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita moschata])

HSP 1 Score: 550 bits (1418), Expect = 1.16e-186
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60
           MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD
Sbjct: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60

Query: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180
           VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS
Sbjct: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180

Query: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298
           KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298

[Close]

BLAST of Csor.00g017590 vs. NCBI nr
Match: XP_022997610.1 (putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita maxima])

HSP 1 Score: 546 bits (1408), Expect = 3.68e-185
Identity = 296/298 (99.33%), Postives = 297/298 (99.66%), Query Frame = 0


Query: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60
           MGLRSNPTGNLSFSPSLILLLLLVSLFASVQV+SAEVEKEELD PKDLGRRSKISWNNVD
Sbjct: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVYSAEVEKEELDGPKDLGRRSKISWNNVD 60

Query: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180
           VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS
Sbjct: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180

Query: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298
           KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298

[Close]

BLAST of Csor.00g017590 vs. NCBI nr
Match: XP_023545881.1 (putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 546 bits (1407), Expect = 5.21e-185
Identity = 295/298 (98.99%), Postives = 297/298 (99.66%), Query Frame = 0


Query: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60
           MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELD PKDLGRRSKISWNN+D
Sbjct: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDGPKDLGRRSKISWNNID 60

Query: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           TIAA+KDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAARKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180
           VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS
Sbjct: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180

Query: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298
           KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298

[Close]

BLAST of Csor.00g017590 vs. NCBI nr
Match: XP_038889550.1 (GDT1-like protein 4 [Benincasa hispida])

HSP 1 Score: 515 bits (1326), Expect = 8.61e-183
Identity = 278/298 (93.29%), Postives = 290/298 (97.32%), Query Frame = 0


Query: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60
           MGLRSNPT NLSFS S +LLLLL+SLFAS+QV+SAEVEK+ELD PKDLGRRSKISW+N D
Sbjct: 1   MGLRSNPTANLSFSSSFLLLLLLLSLFASLQVYSAEVEKDELDGPKDLGRRSKISWSNSD 60

Query: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           TIAAKKD VD EDLNLD+DS+GLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAAKKDGVDPEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180
           VLSGAL+ALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSK++ KS
Sbjct: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKSE-KS 180

Query: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298
           KNALGVAVGAILGHS+CTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 297

[Close]

BLAST of Csor.00g017590 vs. ExPASy TrEMBL
Match: A0A6J1EPP7 (putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita moschata OX=3662 GN=LOC111436248 PE=3 SV=1)

HSP 1 Score: 550 bits (1418), Expect = 5.63e-187
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60
           MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD
Sbjct: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60

Query: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180
           VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS
Sbjct: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180

Query: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298
           KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298

[Close]

BLAST of Csor.00g017590 vs. ExPASy TrEMBL
Match: A0A6J1KA70 (putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita maxima OX=3661 GN=LOC111492492 PE=3 SV=1)

HSP 1 Score: 546 bits (1408), Expect = 1.78e-185
Identity = 296/298 (99.33%), Postives = 297/298 (99.66%), Query Frame = 0


Query: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60
           MGLRSNPTGNLSFSPSLILLLLLVSLFASVQV+SAEVEKEELD PKDLGRRSKISWNNVD
Sbjct: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVYSAEVEKEELDGPKDLGRRSKISWNNVD 60

Query: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180
           VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS
Sbjct: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180

Query: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298
           KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298

[Close]

BLAST of Csor.00g017590 vs. ExPASy TrEMBL
Match: A0A5A7U3P6 (GDT1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00130 PE=3 SV=1)

HSP 1 Score: 514 bits (1324), Expect = 8.41e-183
Identity = 276/298 (92.62%), Postives = 289/298 (96.98%), Query Frame = 0


Query: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60
           MGLRSNPT  LSFSPS +L LLL+SLFAS+QV+SAE EK+ELD PKDLGRRSKISW+N D
Sbjct: 1   MGLRSNPTTTLSFSPSFLLFLLLLSLFASIQVYSAEAEKDELDGPKDLGRRSKISWSNSD 60

Query: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           T+AAKKD VDSEDLNLD+DS+GLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180
           VLSGAL+ALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSK++ KS
Sbjct: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKSE-KS 180

Query: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298
           KNALGVAVGAILGHS+CTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 297

[Close]

BLAST of Csor.00g017590 vs. ExPASy TrEMBL
Match: A0A0A0LMQ4 (GDT1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G074220 PE=3 SV=1)

HSP 1 Score: 505 bits (1300), Expect = 3.81e-179
Identity = 271/298 (90.94%), Postives = 286/298 (95.97%), Query Frame = 0


Query: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60
           MGLRSNPT  LSFS S +L LL +SLFAS QV+SAEVEK++LD PKDLGRRSK+SW+N D
Sbjct: 1   MGLRSNPTATLSFSASFLLFLLFLSLFASHQVYSAEVEKDDLDGPKDLGRRSKMSWSNSD 60

Query: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           T+A KKD VDSEDLNLD+DS+GLGVFDAFFASLSMI+VSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TVATKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180
           VLSGAL+ALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSK++ KS
Sbjct: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKSE-KS 180

Query: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298
           KNALGVAVGAILGHS+CTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 297

[Close]

BLAST of Csor.00g017590 vs. ExPASy TrEMBL
Match: A0A1S3B4E3 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucumis melo OX=3656 GN=LOC103485889 PE=3 SV=1)

HSP 1 Score: 514 bits (1324), Expect = 6.66e-173
Identity = 276/298 (92.62%), Postives = 289/298 (96.98%), Query Frame = 0


Query: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60
           MGLRSNPT  LSFSPS +L LLL+SLFAS+QV+SAE EK+ELD PKDLGRRSKISW+N D
Sbjct: 1   MGLRSNPTTTLSFSPSFLLFLLLLSLFASIQVYSAEAEKDELDGPKDLGRRSKISWSNSD 60

Query: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           T+AAKKD VDSEDLNLD+DS+GLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKS 180
           VLSGAL+ALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSK++ KS
Sbjct: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRSKSE-KS 180

Query: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240
           STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH
Sbjct: 181 STKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATH 240

Query: 241 KNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 298
           KNALGVAVGAILGHS+CTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL
Sbjct: 241 KNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 297

[Close]

BLAST of Csor.00g017590 vs. TAIR 10
Match: AT5G36290.1 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 372.5 bits (955), Expect = 3.2e-103
Identity = 214/304 (70.39%), Postives = 242/304 (79.61%), Query Frame = 0


Query: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVP----KDLGRRSKISW 60
           MGL SNPT        LIL+  +  L +S+    + VE  E        K+LGRR  +  
Sbjct: 1   MGLISNPT-------RLILVATIFFLVSSISGQDSVVENNERQESEGSGKELGRRGMVGT 60

Query: 61  N--NVDTIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAM 120
               VDT+    D + +  LNLDLD+    VFDA F+S SMI+V+EIGDETFIIAALMAM
Sbjct: 61  ERIGVDTVV---DNIGALGLNLDLDATAPSVFDALFSSFSMILVTEIGDETFIIAALMAM 120

Query: 121 RHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRS 180
           RHPK+ VLSGALSAL VMT+LSTGLGRIVPNLISRKHTN+AATVLYAFFGLRLLYIAWRS
Sbjct: 121 RHPKATVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRS 180

Query: 181 KADSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIAT 240
             DSKS+ KKEMEEVEEKLE+GQ KT FRR F RFCTPIFLESFILTFLAEWGDRSQIAT
Sbjct: 181 -TDSKSNQKKEMEEVEEKLESGQGKTPFRRLFSRFCTPIFLESFILTFLAEWGDRSQIAT 240

Query: 241 IALATHKNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYF 299
           IALATHKNA+GVA+GA +GH+VCTS+AV+GGSMLAS+ISQ TVATVGGLLFLGFS+SSYF
Sbjct: 241 IALATHKNAIGVAIGASIGHTVCTSLAVVGGSMLASRISQRTVATVGGLLFLGFSVSSYF 293

[Close]

BLAST of Csor.00g017590 vs. TAIR 10
Match: AT5G36290.2 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 372.5 bits (955), Expect = 3.2e-103
Identity = 214/304 (70.39%), Postives = 242/304 (79.61%), Query Frame = 0


Query: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVP----KDLGRRSKISW 60
           MGL SNPT        LIL+  +  L +S+    + VE  E        K+LGRR  +  
Sbjct: 1   MGLISNPT-------RLILVATIFFLVSSISGQDSVVENNERQESEGSGKELGRRGMVGT 60

Query: 61  N--NVDTIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAM 120
               VDT+    D + +  LNLDLD+    VFDA F+S SMI+V+EIGDETFIIAALMAM
Sbjct: 61  ERIGVDTVV---DNIGALGLNLDLDATAPSVFDALFSSFSMILVTEIGDETFIIAALMAM 120

Query: 121 RHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAATVLYAFFGLRLLYIAWRS 180
           RHPK+ VLSGALSAL VMT+LSTGLGRIVPNLISRKHTN+AATVLYAFFGLRLLYIAWRS
Sbjct: 121 RHPKATVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRS 180

Query: 181 KADSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIAT 240
             DSKS+ KKEMEEVEEKLE+GQ KT FRR F RFCTPIFLESFILTFLAEWGDRSQIAT
Sbjct: 181 -TDSKSNQKKEMEEVEEKLESGQGKTPFRRLFSRFCTPIFLESFILTFLAEWGDRSQIAT 240

Query: 241 IALATHKNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYF 299
           IALATHKNA+GVA+GA +GH+VCTS+AV+GGSMLAS+ISQ TVATVGGLLFLGFS+SSYF
Sbjct: 241 IALATHKNAIGVAIGASIGHTVCTSLAVVGGSMLASRISQRTVATVGGLLFLGFSVSSYF 293

[Close]

BLAST of Csor.00g017590 vs. TAIR 10
Match: AT1G25520.1 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 166.0 bits (419), Expect = 4.6e-41
Identity = 100/225 (44.44%), Postives = 140/225 (62.22%), Query Frame = 0


Query: 85  VFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVP 144
           V   F  SL+M  VSEIGD+TF  AA++AMR+P+ +VL+G LSALIVMT+LS  LG   P
Sbjct: 4   VLQGFTKSLAMTFVSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAP 63

Query: 145 NLISRKHTNNAATVLYAFFGLRLLYIAWRSKADSKSSTKKEMEEVEEKLEA--------- 204
           NLISRK T++  T+L+  FGL  L+  ++          +E+ EVE +L+A         
Sbjct: 64  NLISRKWTHHITTLLFFGFGLWSLWDGFKEGGGG----SEELAEVEAELDADLKANGKSP 123

Query: 205 -------GQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAV 264
                   ++K   R F  +F +PIFL++F + F  EWGD+SQ+ATI LA  +N  GV +
Sbjct: 124 KDSSKREDENKKQNRAFLTQFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPFGVVL 183

Query: 265 GAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSY 294
           G ++   +CT+ AVIGG  LAS+IS+  VA  GG+LF+ F + SY
Sbjct: 184 GGVVAQFLCTTAAVIGGKSLASQISERIVALSGGMLFIIFGIQSY 224

[Close]

BLAST of Csor.00g017590 vs. TAIR 10
Match: AT1G68650.1 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 163.3 bits (412), Expect = 3.0e-40
Identity = 97/222 (43.69%), Postives = 138/222 (62.16%), Query Frame = 0


Query: 85  VFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVP 144
           +   F  SL+M  +SEIGD+TF  AA++AMR+P+ +VL+G LSALIVMT+LS  LG   P
Sbjct: 4   LLQGFTKSLAMTFLSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAP 63

Query: 145 NLISRKHTNNAATVLYAFFGLRLLYIAWRS----------KADSKSSTKKEMEEVEEKLE 204
           NLISRK T++  T L+  FGL  L+  ++           +A+  S  KK  ++ +    
Sbjct: 64  NLISRKWTHHITTFLFFGFGLWSLWDGFKEGGGSEELAEVEAELDSDLKKTNDQSKNSKI 123

Query: 205 AGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGAILGH 264
             + K   R F   F +PIFL++F + F  EWGD+SQ+ATI LA  +N LGV +G I+  
Sbjct: 124 EDEQKKQKRPFLTAFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPLGVVLGGIVAQ 183

Query: 265 SVCTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFP 297
           ++CT+ AV+GG  LAS+IS+  VA  GG+LF+ F + S   P
Sbjct: 184 TLCTTAAVLGGKSLASQISERIVALSGGMLFIIFGIQSLLTP 225

[Close]

BLAST of Csor.00g017590 vs. TAIR 10
Match: AT4G13590.1 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 135.2 bits (339), Expect = 8.7e-32
Identity = 91/214 (42.52%), Postives = 132/214 (61.68%), Query Frame = 0


Query: 89  FFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLIS 148
           F A+ S+I VSEIGD+TF IAAL+AM++ K++VL G++ AL +MT+LS  +G+I  ++ +
Sbjct: 146 FTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSVPA 205

Query: 149 RKHT-----NNAATVLYAFFGLRLLYIAW---RSKADSKSSTKKEMEEVEEKLEAGQSKT 208
           +  T       AA  L  FFGL+ +  AW     +A +   T  E+ E  E  E  + K 
Sbjct: 206 QFQTTLPIGEYAAIALLMFFGLKSIKDAWDLPPVEAKNGEETGIELGEYSEAEELVKEKA 265

Query: 209 TFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGAILGHSVCTSM 268
           + +   L     I  +SF L F AEWGDRS +AT+AL   ++ LGVA GAI GH V T +
Sbjct: 266 SKK---LTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHLVATVL 325

Query: 269 AVIGGSMLASKISQGTVATVGGLLFLGFSLSSYF 295
           A++GG+ LA+ IS+  V  VGG LFL F+ +++F
Sbjct: 326 AIMGGAFLANYISEKLVGYVGGALFLVFAAATFF 356

The following BLAST results are available for this feature:

BLAST of Csor.00g017590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Y38	4.5e-102	70.39	GDT1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g36290 PE=2 SV=1	[more]
Q6ZIB9	3.3e-100	73.84	GDT1-like protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0528500 PE=...	[more]
A2YXC7	4.3e-100	74.20	GDT1-like protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_29993 PE=3 SV=...	[more]
A2ZE50	5.6e-100	73.68	GDT1-like protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_36063 PE=3 SV=...	[more]
Q2R4J1	5.6e-100	73.68	GDT1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0472500 PE=...	[more]

BLAST of Csor.00g017590 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6598935.1	8.55e-197	100.00	GDT1-like protein 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022929759.1	1.16e-186	100.00	putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita moscha...	[more]
XP_022997610.1	3.68e-185	99.33	putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita maxima...	[more]
XP_023545881.1	5.21e-185	98.99	putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita pepo s...	[more]
XP_038889550.1	8.61e-183	93.29	GDT1-like protein 4 [Benincasa hispida]	[more]

BLAST of Csor.00g017590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EPP7	5.63e-187	100.00	putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita mosc...	[more]
A0A6J1KA70	1.78e-185	99.33	putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita maxi...	[more]
A0A5A7U3P6	8.41e-183	92.62	GDT1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G...	[more]
A0A0A0LMQ4	3.81e-179	90.94	GDT1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G074220 PE=3 SV=1	[more]
A0A1S3B4E3	6.66e-173	92.62	LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23...	[more]

BLAST of Csor.00g017590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G36290.1	3.2e-103	70.39	Uncharacterized protein family (UPF0016)	[more]
AT5G36290.2	3.2e-103	70.39	Uncharacterized protein family (UPF0016)	[more]
AT1G25520.1	4.6e-41	44.44	Uncharacterized protein family (UPF0016)	[more]
AT1G68650.1	3.0e-40	43.69	Uncharacterized protein family (UPF0016)	[more]
AT4G13590.1	8.7e-32	42.52	Uncharacterized protein family (UPF0016)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 179..199
None	No IPR available	PANTHER	PTHR12608:SF9	GDT1-LIKE PROTEIN 3	coord: 18..296
IPR001727	Gdt1 family	PFAM	PF01169	UPF0016	coord: 216..288 e-value: 2.8E-20 score: 72.4 coord: 91..164 e-value: 4.9E-18 score: 65.2
IPR001727	Gdt1 family	PANTHER	PTHR12608	TRANSMEMBRANE PROTEIN HTP-1 RELATED	coord: 18..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g017590.m01	Csor.00g017590.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070588	calcium ion transmembrane transport
biological_process	GO:0032468	Golgi calcium ion homeostasis
biological_process	GO:0032472	Golgi calcium ion transport
biological_process	GO:0071421	manganese ion transmembrane transport
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015085	calcium ion transmembrane transporter activity
molecular_function	GO:0005384	manganese ion transmembrane transporter activity
molecular_function	GO:0008270	zinc ion binding