Csor.00g017250 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g017250
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Laccase family protein
Location	Csor_Chr13: 202003 .. 204773 (+)
RNA-Seq Expression	Csor.00g017250
Synteny	Csor.00g017250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGCTGCTTAAGATCAAGTCCTGCTGCTCTTTCTTCTTGCTTTCCCTTTTGGCCTTCCTCCTTTTACTCCCTCCCTTTGCTGTTGCAGAAACTCACTACCATGAGTTCATTGTAAGTTCTCAAATTCTCCGCTTTTTAGATTCGTATTCTCACGTTCGAGTAAACGAGTATACGATCTTAAAAATATAAGGCTTACGAAAATTGAAGATTATTATTTATGTCTCGATCGCGAGATTCCACGTAGATTAGAGTGGGGAACAAAACATTCTTTATAAGAGTGTGAAAATTTCTCCCTACAATACGTGTTTTAAAAACTTTGAAAACTCGAAAGGTAAAGCCCAAAGAGGACAATATCTAGCAGTGGGCTTGGGGCGTTACAAATGGTATCAAGTCGGATACTAGGCAATGTGCCAATGAGAACACTGGCCCCAAAAGGGTGGAGTGTGAGATCCCACATCGATAGGAGGGAGGAACGAAACATTCTTTATAAGGGTGCGGAACCCTTTTTGGATTTTTAAAACATTGAGGGGAAACCCAAATGGAAACTTCAAAACATGGTAAAAAAGCTCGTGTTAGTTTGTGAGAGTAGTAGTTTTTATTGTTACAAGCAACCAATAGGTAATATGATCATGTGGCAGGTAAATGCTGAATCTATCTATTTAAGCTTTTACGCAACGTTGAGTTCGGGATTTCTCAGTTTATTTGTCTGTGTTTGTGCGCAAAAACTGAACTTTAGGTGCAACCAAAGCCAGTGAAGAGGCTGTGCAAAGTCCACAACATCATAACAGTGAACGGAAAGTTCCCTGGACCAACTCTAGCGGTCAGAAACGGCGATTCCCTTGTCATCAAAGTAGTGAATGTTGCCCGCTACAACGTCTCTCTCCATTGGTATGAACCATAATGTTTCCATTTGATGGGCATACAAAACTTAGTGGTACTTAAATGGTTGATTGTATGGTTAGGCATGGGATCAGGCAGCTGAGGAACCCATGGGCAGATGGGCCAGAGTTCGTGACCCAATGCTCCATAAAGCCAGGAGGGAGCTACACCTACAGGTTCACCATTCAAGACCAAGAGGGAACCCTGTGGTGGCATGCTCATAGCCGATGGCTTCGAGCCACCGTCTATGGCGCTCTCATTATCTACCCCAAGCTCCCCTCTTCATACCCTTTCTTAATGCCCAAAAGAGAAGCCTCTGTTCTTCTTGGTAACCGCAGTCTCTTAACAAATGCTTAACAAATGCTTAACAAATGCTTAACAAATGCTTAACAAATGCTTAACAAATGCTTAACAATGCTTAACAAATGCTTAACAAATGCTTAACAAATGCTCGCAATGCCTTATTTATGGTTTCTTGAACAGGGGAATGGTTCGACAGAGACCCAATAAGTGTGCTGCGGCAGGCGCTTTTCACTGGCGCAGCTCCTAATGTGTCCGATGCCTACACCATCAACGGCCAGCCCGGCGACTTCTACCGCTGCTCCGGCAAAGGTTGGTGCTTGGTGCTTGGTGCTGTCTTCTTTATTACAAATTTGGAATGGGTTTTGGTTACGATGAAACAAAAAGGGTTTTGGTGTTTGATATTTGGCAGAGACGGTGAGATTCGCGGTGGATTCCGGCGAGACAATTCTTTTGAGGGTCATAAACTCAGCATTGAATCAGGAGCTGTTCTTCTCCGTCGCTAACCACCAATTGACGGTGGTGGCCGTCGACGCGTCTTACACCAAACCATTCACAACAAATGTGATTATGATCGGACCCGGACAGACCACCGATGTTCTCCTGACAGCCAACCAACAACCAGCTCACTACTACATGGCTGCCACCGCCTACAACACCGCCCTCAACGCCGCTTTCGACAACACCACCACCACAGCCATCCTCGAATACAAAAATTGCCAGCAACACCAGCAGCAGCCACCGCGACCCATTATGGCTCAGCTCCCAAATTTCAACGACACCCCCACCGCCACCCGATTCACCTCCCAACTCCGGAGCCCAAACAGAGTGAACGTCCCGACCCGAATCGACGACAGCTTACTCTTCACCGTCGGATTAGGCCTCATCAACTGCACGAACCCAAACAGCCCCCGCTGCCAAGGCCCCAACGGCACTCGCTTCGCCGCCAGCATCAACAACGTCTCCTTCGTTTTCCCAAAATCCAATTCCATCATGCAAGCCTTTTACCAAGGCGTTCCGGGGGTTTTCACCACCGACTTTCCGCCGGTTCCGCCGCTGCAATTTGATTACACAGGGAACGTGAGCAGAGGGCTTTGGCAGCCCGGTCGAGGGACCAAGGCTTACACGCTTAAATATGGGTCAAATGTGCAGATTGTGCTGCAGGACACCAGCATTGTAACCACCGAAGATCACCCGATGCATCTCCACGGCTACCATTTCTACGTCGTTGGTTCGGGTTTTGGCAATTTCAACCCAGCCACGGATCCGGCGAGGTTCAATCTCATCGACCCACCTGTGAGAAACACGATTGGAACGCCCCCCGGTGGTTGGGTTGCCATCCGATTCGTGGCTGATAATCCAGGTAAGCTCCGATTGCAACAAATAAATGTGTGTTGTATATAATTAAATGGTTTTGAATTCCCCGTAATAAATGGATTGCGCGCTGAAAAACAGGGGCTTGGTTGATGCATTGCCATATAGACTCGCACCTTGCTTGGGGATTGGCGATGGTGTTTCTGGTTGAGAATGGCGAAGGAGAGCTGCAGTCTGTTCTTCCTCCCCCGCCGGATCTGCCTCCTTGTTAA

mRNA sequence

ATGGAGGAGCTGCTTAAGATCAAGTCCTGCTGCTCTTTCTTCTTGCTTTCCCTTTTGGCCTTCCTCCTTTTACTCCCTCCCTTTGCTGTTGCAGAAACTCACTACCATGAGTTCATTGCGCTTTTCACTGGCGCAGCTCCTAATGTGTCCGATGCCTACACCATCAACGGCCAGCCCGGCGACTTCTACCGCTGCTCCGGCAAAGACTCGCACCTTGCTTGGGGATTGGCGATGGTGTTTCTGGTTGAGAATGGCGAAGGAGAGCTGCAGTCTGTTCTTCCTCCCCCGCCGGATCTGCCTCCTTGTTAA

Coding sequence (CDS)

ATGGAGGAGCTGCTTAAGATCAAGTCCTGCTGCTCTTTCTTCTTGCTTTCCCTTTTGGCCTTCCTCCTTTTACTCCCTCCCTTTGCTGTTGCAGAAACTCACTACCATGAGTTCATTGCGCTTTTCACTGGCGCAGCTCCTAATGTGTCCGATGCCTACACCATCAACGGCCAGCCCGGCGACTTCTACCGCTGCTCCGGCAAAGACTCGCACCTTGCTTGGGGATTGGCGATGGTGTTTCTGGTTGAGAATGGCGAAGGAGAGCTGCAGTCTGTTCTTCCTCCCCCGCCGGATCTGCCTCCTTGTTAA

Protein sequence

MEELLKIKSCCSFFLLSLLAFLLLLPPFAVAETHYHEFIALFTGAAPNVSDAYTINGQPGDFYRCSGKDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC

Homology

[Close]

BLAST of Csor.00g017250 vs. ExPASy Swiss-Prot
Match: Q56YT0 (Laccase-3 OS=Arabidopsis thaliana OX=3702 GN=LAC3 PE=2 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 4.5e-09
Identity = 29/44 (65.91%), Postives = 32/44 (72.73%), Query Frame = 0


Query: 59  PGDFYRCSGKDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC 103
           PG ++     DSHL WGLAMVFLVENG G+LQSV  PP DLP C
Sbjct: 527 PGAWFMHCHIDSHLGWGLAMVFLVENGRGQLQSVQAPPLDLPRC 570

[Close]

BLAST of Csor.00g017250 vs. ExPASy Swiss-Prot
Match: Q9LYQ2 (Laccase-13 OS=Arabidopsis thaliana OX=3702 GN=LAC13 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 7.7e-09
Identity = 29/48 (60.42%), Postives = 32/48 (66.67%), Query Frame = 0


Query: 55  INGQPGDFYRCSGKDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC 103
           +   PG +      DSH+ WGLAMVFLVENGEG LQSV  PP DLP C
Sbjct: 522 VANNPGAWLMHCHIDSHIFWGLAMVFLVENGEGHLQSVQSPPLDLPQC 569

[Close]

BLAST of Csor.00g017250 vs. ExPASy Swiss-Prot
Match: Q9FLB5 (Laccase-12 OS=Arabidopsis thaliana OX=3702 GN=LAC12 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.4e-07
Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 43  TGAAPNVSDAYTINGQPGDFYRCSGKDSHLAWGLAMVFLVENGEGELQSVL 94
           TGAAPN+SDAYTINGQPGD Y CS K++       +V  + +GE  L  V+
Sbjct: 182 TGAAPNISDAYTINGQPGDLYNCSTKET-------VVVPINSGETSLLRVI 225

[Close]

BLAST of Csor.00g017250 vs. ExPASy Swiss-Prot
Match: O80434 (Laccase-4 OS=Arabidopsis thaliana OX=3702 GN=IRX12 PE=2 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 4.2e-07
Identity = 24/44 (54.55%), Postives = 29/44 (65.91%), Query Frame = 0


Query: 59  PGDFYRCSGKDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC 103
           PG ++     + H  WGL M FLVENG+G  QS+LPPP DLP C
Sbjct: 515 PGVWFMHCHLEVHTTWGLKMAFLVENGKGPNQSILPPPKDLPKC 558

[Close]

BLAST of Csor.00g017250 vs. ExPASy Swiss-Prot
Match: Q2RBK2 (Putative laccase-17 OS=Oryza sativa subsp. japonica OX=39947 GN=LAC17 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.5e-07
Identity = 25/44 (56.82%), Postives = 30/44 (68.18%), Query Frame = 0


Query: 59  PGDFYRCSGKDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC 103
           PG +      D H+ WGLAM FLV++G GELQS+  PPPDLP C
Sbjct: 524 PGVWLMHCHLDVHITWGLAMAFLVDDGVGELQSLEAPPPDLPLC 567

[Close]

BLAST of Csor.00g017250 vs. NCBI nr
Match: KAG6583335.1 (Laccase-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 210 bits (535), Expect = 1.26e-68
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MEELLKIKSCCSFFLLSLLAFLLLLPPFAVAETHYHEFIALFTGAAPNVSDAYTINGQPG 60
           MEELLKIKSCCSFFLLSLLAFLLLLPPFAVAETHYHEFIALFTGAAPNVSDAYTINGQPG
Sbjct: 1   MEELLKIKSCCSFFLLSLLAFLLLLPPFAVAETHYHEFIALFTGAAPNVSDAYTINGQPG 60

Query: 61  DFYRCSGKDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC 102
           DFYRCSGKDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC
Sbjct: 61  DFYRCSGKDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC 102

[Close]

BLAST of Csor.00g017250 vs. NCBI nr
Match: TKR85326.1 (laccase family protein [Populus alba])

HSP 1 Score: 109 bits (273), Expect = 5.24e-27
Identity = 52/64 (81.25%), Postives = 54/64 (84.38%), Query Frame = 0


Query: 39  IALFTGAAPNVSDAYTINGQPGDFYRCSGKDSHLAWGLAMVFLVENGEGELQSVLPPPPD 98
           IA FTGAAPN+SDAYTINGQPGD YRCS +DSHL WGLAM FLVENG G LQSV PPP D
Sbjct: 186 IADFTGAAPNISDAYTINGQPGDLYRCSKQDSHLNWGLAMAFLVENGVGMLQSVQPPPLD 245

Query: 99  LPPC 102
           LP C
Sbjct: 246 LPRC 249

[Close]

BLAST of Csor.00g017250 vs. NCBI nr
Match: TKR74557.1 (hypothetical protein D5086_0000295900 [Populus alba])

HSP 1 Score: 95.5 bits (236), Expect = 1.94e-21
Identity = 46/69 (66.67%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 43  TGAAPNVSDAYTINGQPGDFYRCSGK---------DSHLAWGLAMVFLVENGEGELQSVL 102
           TGAAPN+SDAYTINGQPGD Y CS +         D H+ WGLAM FLVE+G GELQSV 
Sbjct: 189 TGAAPNISDAYTINGQPGDLYNCSSEGVWLMHCHLDVHITWGLAMAFLVEDGIGELQSVE 248

[Close]

BLAST of Csor.00g017250 vs. NCBI nr
Match: TKS07660.1 (hypothetical protein D5086_0000111260 [Populus alba])

HSP 1 Score: 93.6 bits (231), Expect = 1.05e-20
Identity = 46/69 (66.67%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 43  TGAAPNVSDAYTINGQPGDFYRCSGK---------DSHLAWGLAMVFLVENGEGELQSVL 102
           TGAAPN+SDAYTINGQPGD Y CS K         D H+ WGLAM FLVE G G LQSV 
Sbjct: 188 TGAAPNISDAYTINGQPGDLYNCSSKGVWLMHCHLDVHITWGLAMAFLVEEGVGILQSVE 247

[Close]

BLAST of Csor.00g017250 vs. NCBI nr
Match: KVH94097.1 (Cupredoxin, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 90.5 bits (223), Expect = 3.14e-20
Identity = 43/63 (68.25%), Postives = 49/63 (77.78%), Query Frame = 0


Query: 40  ALFTGAAPNVSDAYTINGQPGDFYRCSGKDSHLAWGLAMVFLVENGEGELQSVLPPPPDL 99
           ALFTGAAPNVSDA TINGQPG +      D+HLAWG AM F+VENG GE +++LPPP DL
Sbjct: 116 ALFTGAAPNVSDALTINGQPGVWLMHCHIDTHLAWGFAMSFIVENGVGESETLLPPPSDL 175

Query: 100 PPC 102
           P C
Sbjct: 176 PQC 178

[Close]

BLAST of Csor.00g017250 vs. ExPASy TrEMBL
Match: A0A4U5NQH6 (Laccase family protein OS=Populus alba OX=43335 GN=D5086_0000248850 PE=3 SV=1)

HSP 1 Score: 109 bits (273), Expect = 2.54e-27
Identity = 52/64 (81.25%), Postives = 54/64 (84.38%), Query Frame = 0


Query: 39  IALFTGAAPNVSDAYTINGQPGDFYRCSGKDSHLAWGLAMVFLVENGEGELQSVLPPPPD 98
           IA FTGAAPN+SDAYTINGQPGD YRCS +DSHL WGLAM FLVENG G LQSV PPP D
Sbjct: 186 IADFTGAAPNISDAYTINGQPGDLYRCSKQDSHLNWGLAMAFLVENGVGMLQSVQPPPLD 245

Query: 99  LPPC 102
           LP C
Sbjct: 246 LPRC 249

[Close]

BLAST of Csor.00g017250 vs. ExPASy TrEMBL
Match: A0A4U5MX01 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000295900 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 9.41e-22
Identity = 46/69 (66.67%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 43  TGAAPNVSDAYTINGQPGDFYRCSGK---------DSHLAWGLAMVFLVENGEGELQSVL 102
           TGAAPN+SDAYTINGQPGD Y CS +         D H+ WGLAM FLVE+G GELQSV 
Sbjct: 189 TGAAPNISDAYTINGQPGDLYNCSSEGVWLMHCHLDVHITWGLAMAFLVEDGIGELQSVE 248

[Close]

BLAST of Csor.00g017250 vs. ExPASy TrEMBL
Match: A0A4U5QB77 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000111260 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 5.06e-21
Identity = 46/69 (66.67%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 43  TGAAPNVSDAYTINGQPGDFYRCSGK---------DSHLAWGLAMVFLVENGEGELQSVL 102
           TGAAPN+SDAYTINGQPGD Y CS K         D H+ WGLAM FLVE G G LQSV 
Sbjct: 188 TGAAPNISDAYTINGQPGDLYNCSSKGVWLMHCHLDVHITWGLAMAFLVEEGVGILQSVE 247

[Close]

BLAST of Csor.00g017250 vs. ExPASy TrEMBL
Match: A0A103XNP2 (Cupredoxin (Fragment) OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_003833 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.52e-20
Identity = 43/63 (68.25%), Postives = 49/63 (77.78%), Query Frame = 0


Query: 40  ALFTGAAPNVSDAYTINGQPGDFYRCSGKDSHLAWGLAMVFLVENGEGELQSVLPPPPDL 99
           ALFTGAAPNVSDA TINGQPG +      D+HLAWG AM F+VENG GE +++LPPP DL
Sbjct: 116 ALFTGAAPNVSDALTINGQPGVWLMHCHIDTHLAWGFAMSFIVENGVGESETLLPPPSDL 175

Query: 100 PPC 102
           P C
Sbjct: 176 PQC 178

[Close]

BLAST of Csor.00g017250 vs. ExPASy TrEMBL
Match: A0A4U5MWZ6 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000295890 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 6.36e-19
Identity = 43/69 (62.32%), Postives = 46/69 (66.67%), Query Frame = 0


Query: 43  TGAAPNVSDAYTINGQPGDFYRCSGK---------DSHLAWGLAMVFLVENGEGELQSVL 102
           TG APN SDAYTINGQPGD Y CS +         D H+ WGLA  FLVENG GELQS+ 
Sbjct: 193 TGGAPNSSDAYTINGQPGDLYNCSSQGVWLMHCHLDVHITWGLATAFLVENGVGELQSIE 252

[Close]

BLAST of Csor.00g017250 vs. TAIR 10
Match: AT2G30210.1 (laccase 3 )

HSP 1 Score: 62.0 bits (149), Expect = 3.2e-10
Identity = 29/44 (65.91%), Postives = 32/44 (72.73%), Query Frame = 0


Query: 59  PGDFYRCSGKDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC 103
           PG ++     DSHL WGLAMVFLVENG G+LQSV  PP DLP C
Sbjct: 527 PGAWFMHCHIDSHLGWGLAMVFLVENGRGQLQSVQAPPLDLPRC 570

HSP 2 Score: 53.9 bits (128), Expect = 8.7e-08
Identity = 24/27 (88.89%), Postives = 24/27 (88.89%), Query Frame = 0


Query: 40  ALFTGAAPNVSDAYTINGQPGDFYRCS 67
           A FTGAA NVSDAYTINGQPGD YRCS
Sbjct: 180 AQFTGAAANVSDAYTINGQPGDLYRCS 206

[Close]

BLAST of Csor.00g017250 vs. TAIR 10
Match: AT5G07130.1 (laccase 13 )

HSP 1 Score: 61.2 bits (147), Expect = 5.5e-10
Identity = 29/48 (60.42%), Postives = 32/48 (66.67%), Query Frame = 0


Query: 55  INGQPGDFYRCSGKDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC 103
           +   PG +      DSH+ WGLAMVFLVENGEG LQSV  PP DLP C
Sbjct: 522 VANNPGAWLMHCHIDSHIFWGLAMVFLVENGEGHLQSVQSPPLDLPQC 569

[Close]

BLAST of Csor.00g017250 vs. TAIR 10
Match: AT5G05390.1 (laccase 12 )

HSP 1 Score: 57.0 bits (136), Expect = 1.0e-08
Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 43  TGAAPNVSDAYTINGQPGDFYRCSGKDSHLAWGLAMVFLVENGEGELQSVL 94
           TGAAPN+SDAYTINGQPGD Y CS K++       +V  + +GE  L  V+
Sbjct: 182 TGAAPNISDAYTINGQPGDLYNCSTKET-------VVVPINSGETSLLRVI 225

[Close]

BLAST of Csor.00g017250 vs. TAIR 10
Match: AT2G38080.1 (Laccase/Diphenol oxidase family protein )

HSP 1 Score: 55.5 bits (132), Expect = 3.0e-08
Identity = 24/44 (54.55%), Postives = 29/44 (65.91%), Query Frame = 0


Query: 59  PGDFYRCSGKDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC 103
           PG ++     + H  WGL M FLVENG+G  QS+LPPP DLP C
Sbjct: 515 PGVWFMHCHLEVHTTWGLKMAFLVENGKGPNQSILPPPKDLPKC 558

[Close]

BLAST of Csor.00g017250 vs. TAIR 10
Match: AT2G40370.1 (laccase 5 )

HSP 1 Score: 55.1 bits (131), Expect = 3.9e-08
Identity = 25/48 (52.08%), Postives = 31/48 (64.58%), Query Frame = 0


Query: 55  INGQPGDFYRCSGKDSHLAWGLAMVFLVENGEGELQSVLPPPPDLPPC 103
           I   PG +      D+H++WGLAM FLVENG G LQ++  PP DLP C
Sbjct: 533 IADNPGVWIMHCHLDAHISWGLAMAFLVENGNGVLQTIEQPPHDLPVC 580

The following BLAST results are available for this feature:

BLAST of Csor.00g017250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56YT0	4.5e-09	65.91	Laccase-3 OS=Arabidopsis thaliana OX=3702 GN=LAC3 PE=2 SV=2	[more]
Q9LYQ2	7.7e-09	60.42	Laccase-13 OS=Arabidopsis thaliana OX=3702 GN=LAC13 PE=2 SV=1	[more]
Q9FLB5	1.4e-07	52.94	Laccase-12 OS=Arabidopsis thaliana OX=3702 GN=LAC12 PE=2 SV=1	[more]
O80434	4.2e-07	54.55	Laccase-4 OS=Arabidopsis thaliana OX=3702 GN=IRX12 PE=2 SV=2	[more]
Q2RBK2	5.5e-07	56.82	Putative laccase-17 OS=Oryza sativa subsp. japonica OX=39947 GN=LAC17 PE=3 SV=1	[more]

BLAST of Csor.00g017250 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583335.1	1.26e-68	100.00	Laccase-3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
TKR85326.1	5.24e-27	81.25	laccase family protein [Populus alba]	[more]
TKR74557.1	1.94e-21	66.67	hypothetical protein D5086_0000295900 [Populus alba]	[more]
TKS07660.1	1.05e-20	66.67	hypothetical protein D5086_0000111260 [Populus alba]	[more]
KVH94097.1	3.14e-20	68.25	Cupredoxin, partial [Cynara cardunculus var. scolymus]	[more]

BLAST of Csor.00g017250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4U5NQH6	2.54e-27	81.25	Laccase family protein OS=Populus alba OX=43335 GN=D5086_0000248850 PE=3 SV=1	[more]
A0A4U5MX01	9.41e-22	66.67	Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000295900 PE=3 SV=1	[more]
A0A4U5QB77	5.06e-21	66.67	Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000111260 PE=3 SV=1	[more]
A0A103XNP2	1.52e-20	68.25	Cupredoxin (Fragment) OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_00383...	[more]
A0A4U5MWZ6	6.36e-19	62.32	Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000295890 PE=3 SV=1	[more]

BLAST of Csor.00g017250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30210.1	3.2e-10	65.91	laccase 3	[more]
AT5G07130.1	5.5e-10	60.42	laccase 13	[more]
AT5G05390.1	1.0e-08	52.94	laccase 12	[more]
AT2G38080.1	3.0e-08	54.55	Laccase/Diphenol oxidase family protein	[more]
AT2G40370.1	3.9e-08	52.08	laccase 5	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11709:SF291	LACCASE	coord: 69..102
None	No IPR available	PANTHER	PTHR11709:SF291	LACCASE	coord: 40..67
IPR045087	Multicopper oxidase	PANTHER	PTHR11709	MULTI-COPPER OXIDASE	coord: 69..102
IPR045087	Multicopper oxidase	PANTHER	PTHR11709	MULTI-COPPER OXIDASE	coord: 40..67
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 48..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g017250.m01	Csor.00g017250.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046274	lignin catabolic process
cellular_component	GO:0048046	apoplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0052716	hydroquinone:oxygen oxidoreductase activity