Csor.00g017160 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g017160
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transcription initiation factor TFIID subunit 15b-like
Location	Csor_Chr13: 234954 .. 238648 (-)
RNA-Seq Expression	Csor.00g017160
Synteny	Csor.00g017160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGGATGTACGATCAAGGAGGAGACGCTGCTCCTCCGTCTTACGGTGCCCCTGGGGGTGGTGGGGGATACGGTGGTGGTGGTTATGGTGGAAAAGGTGGTGACGGTGGATATGGAGGCGGAGGCCGGGGAGGCGGCGGCGGTAGAGGCTATGGTGGACGAGGTGGCGGCGGAGGTGGAGGCTACGGTGGTCGAGGTATGTACTTCTCTTGTGTTCTTAGATTTTTTTTTTTCTTAGTCGTTTAGTGACAAGAATCTGTGGGTGAAATGAAGTTTCTTGGTAAGAAAAAACCTAGGAATTATTTATACTTTATTTATGTCTGATCGGAAGACTTTCTTTTAACTGTTGGTTCGACATGTTTTAGTTTTTTGAATTGATTTGTAAAGCTTTGTTTTTGCTCTTGGATGGGTGTGACTTGTACTTGGTACTGAAATTTTCAGCGATCGGATCTAATTGTGAAACTAATAGTGAATTGTTTTTGTTTTCCCCTAAAAAGTTGCAAGCTCTTCCACGCCTCAATTTCTTTGTCTGCGTTTTGATGCGATATAGGTGGCAGTGGCGGAGGGGGTTATCAAGGAGGAGATCGCGGAGGGCGAGGCAGTGGACGTGGTGGCGGAGGTGGTCGTGGCGGAAGCGGCAGAGATGGTGATTGGGTCTGCCCTAATCCTGGGTATGGCTTGTCCTTTCTTCGTTTATTACTGACTTCTTTTGTTTTAGTTTATTTTCATGCGTACACTGAACGGCTCCCATTCTTAAATGCAGAAATTTTAGACATTTACGTAGGGAACTTGTCTTATGTTTGTTTTCTACAAGTTTATAGTTAAAACTATGTTTTTGTGTTTTTTTTTTTTTTTTTTTTTGCCATATAGCTGCGGGAATTTGAACTTTGCTAGGAGAGTGGAGTGTAATAAGTGTGGTGCACCCTCACCTGGGGGTGCTAGCAGTGGTGGTGGTGGTTTTAATAGAGGTGGAGCTGATGGTGGTTATAATAGAGGTGGAGGTGATGGGGGTTACAACAGAGGTGGAGGTGATGGGGGTTACAATAGAGGTGGAGGTGATGGGGGTTACAATAGAGGTGGAGGTGATGGGGGTTACGGTGGTAATCGTAATGGCAGAGGTGGTAGTTTCCATGGTGGTCGAAGTGGAACTCATGATGGAGGCCGAAATGAAGGAGGGAACAGAGGTGTTAACTCGTATGGTGGTCACCAGGGAGGAGAAGATAGTGGTTACAGTCAGGTTCCCCCTTCCTCGGCACCCTCATCTGGTGGCCTTGCTGGCTCTTATCCACCATCTTACCATGGTGGAAGTGCAGATTACGGGACTGATGCAGTTCCTCCTCCTGCAAGCTACAGTGGAACTACATACCCTCCAACTTATGGTGGTCCATCTGGTGGCTATGGTGGTGATAGTCTAGGTGATGGGCGGAGTTCTGCCGGTCGGGGTGGACCATCAGCTGGATATGACGGCGGCTACAATGCAGGTGGTAGAGGTGGCTATAATTCTGGTGGTAGAGGAGGAGGAAGCTATAATACTGGTGGTGGTAGAGGTGGCGGTTATGGAAGTACACCGGCAGCAGAGCCAGCGCAAGTTAAACAGTGCGATGATAATTGTGATGATTCATGTGATAACTCTAGAATCTATGTTTCTAATTTGCCAACAGATGTGACAATTGATGAATTGAGAGAACTATTTGGTGGAATTGGTCAAGTAAGTAAGCTGCTATTCAGTTCTATTCTGTTGCTTTTGGTATTCTATCTTTATTGAAAAGTGTCGGTACCATGTGATTGTTAATTCTATATTAGACAATGTATAAACTTTCAAAATATATTTCCATGTCTAGAAAGTTACTTTTGGTTATGTGGCAATTGTTTGTGATAGATATTCTGTCTTCTTTAAAACGTGTCGCGATATGTGGCAGGTTATTTCATTTTTAAAAAAATAATGGGTATACATTCATCTATTTTCTAAATGAGTTGTCTTTTCATGTTTAGAAGTTATGTTTTGTCTTCTGATTGAGACTAAGTGTTAATGATGTAGGAAGGTCTTGTAGGTCTAGCATACTCTTATTGGATATAAAGTGGTTTTCGTTTCTCAAAGTGCTGAAGGATCGTTTATCAGCATTTCCTTTTGCATTTGGCATCAGATAATTAACTGTTTAACTGAAGCATTTTTTTGCATTTTTAATTTGAAGATTGGAAGAATTAAGCAGAAGAGGGGCTACAAGGATCAGTGGCCTTGGAACATTAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAAGATCCCCAAGCAGCGCATTCTGCTGGCGGTTTCTATAACAGTAACTACTGTGTTCCTATAGTATTTCAGAAACAATAATAGCTATTATGGTTTTAATTTTAGTTCGAACTTTTCTATGTATTATTTTTGGATGATCTTGTTTTTTTATTCTCAGATTATGATTTGAGAGGATATAACATCAGTGTTGCAATGGCTGAGAAGTCTGCACCGAGGGCTCCACCTGCATACAACCATGGGTACTTGCTTTGCCTTTATTCTTTCAAAACAAATAAACAAGTCCAAGTAAAGTTGACGCATGCATATAGTACTGCACTAGTTCTTGCTTGTTTTTTTGCTGATAAGCCTGAGAAATTGGCAAATGTAATTACCAGTAAGAGCTAAGAGGATTTCTGTTTTTCATTTCTGCAACTGTTACTCTGCCTTAGCTTTCTTCTTCATACACATACACAGGCAGAAAAAGATCTTGTTGGCAGAATCAGGATATAACAAGATGCCGTTTTGGCTAAAATGAGATACTGTTTGATATCCCCAAGTTCATGCTATCTAGGAATTCTGTTTTTTTTCCTTGTGAATTCTCAATAATTAAGAAGGGCTTGATATCTCAAAGATGATCCTATCAATGATGTACTTTGTTTTGATTTTTTTCTCTGAAACCCAAACATATTTAAAAATTAGGCTTTGAATTAAATTAGCCTGTCATTTTTTGTGTTTAGGATGAATTATTTGTTTCTGTTCTTTCAAAATTCTTTTTGTGATTGTGTCATTTCTTCCATAAATTCCAACTGGGCTAATTTTTTTAGTAGGTCACCATTTCCTTGTTCTTGAGTGTGAGGTGTGGGTAGATACAAAAAAGAAGCCTGAGAAATCAAAGTAACCTTCATGCCCAATTATACTAAAGAGTTCCAATCCAGAAGAATCATACTAAGTTGGTAACTACAAATAATTTTATTAACAAATGCCCACAAGGGGGAGTTAAACCTAATAAAAAACAAAAAGGTCCTCCAAAGATTGTGCGAAATAGCCCATAACAAAGCCAAAAAAACAAGACTGCCAAAGAACCCTTCCTTTATCACGAAAAGGAGGATTGAAAATCTCCGCTAACAACGTACAATTGATTATAGAAATACTTGTCTGTTACATTTAGAACATGTTTTTGTTTAGAATGCTACACATTCTTTAAATACTTCAATTGTCTGGATGTGCGTTCACTTATATTATTTGTATAATTATTATGCTTTAGAACTTATTTTGTACTTCAATATCATGTACAGTGGTGGTGGTAGAGGCGGATATGGAGGTGGTGGGGATAGGCGCAGAGATAGCTATAGGGATGGAGCCTCTGGACCTGATAGACATCAGCATGGTGGAAATCGATCTCGTCCTTACTGA

mRNA sequence

ATGTCTGGGATGTACGATCAAGGAGGAGACGCTGCTCCTCCGTCTTACGGTGCCCCTGGGGGTGGTGGGGGATACGGTGGTGGTGGTTATGGTGGAAAAGGTGGTGACGGTGGATATGGAGGCGGAGGCCGGGGAGGCGGCGGCGGTAGAGGCTATGGTGGACGAGGTGGCGGCGGAGGTGGAGGCTACGGTGGTCGAGGTGGCAGTGGCGGAGGGGGTTATCAAGGAGGAGATCGCGGAGGGCGAGGCAGTGGACGTGGTGGCGGAGGTGGTCGTGGCGGAAGCGGCAGAGATGGTGATTGGGTCTGCCCTAATCCTGGCTGCGGGAATTTGAACTTTGCTAGGAGAGTGGAGTGTAATAAGTGTGGTGCACCCTCACCTGGGGGTGCTAGCAGTGGTGGTGGTGGTTTTAATAGAGGTGGAGCTGATGGTGGTTATAATAGAGGTGGAGGTGATGGGGGTTACAACAGAGGTGGAGGTGATGGGGGTTACAATAGAGGTGGAGGTGATGGGGGTTACAATAGAGGTGGAGGTGATGGGGGTTACGGTGGTAATCGTAATGGCAGAGGTGGTAGTTTCCATGGTGGTCGAAGTGGAACTCATGATGGAGGCCGAAATGAAGGAGGGAACAGAGGTGTTAACTCGTATGGTGGTCACCAGGGAGGAGAAGATAGTGGTTACAGTCAGGTTCCCCCTTCCTCGGCACCCTCATCTGGTGGCCTTGCTGGCTCTTATCCACCATCTTACCATGGTGGAAGTGCAGATTACGGGACTGATGCAGTTCCTCCTCCTGCAAGCTACAGTGGAACTACATACCCTCCAACTTATGGTGGTCCATCTGGTGGCTATGGTGGTGATAGTCTAGGTGATGGGCGGAGTTCTGCCGGTCGGGGTGGACCATCAGCTGGATATGACGGCGGCTACAATGCAGGTGGTAGAGGTGGCTATAATTCTGGTGGTAGAGGAGGAGGAAGCTATAATACTGGTGGTGGTAGAGGTGGCGGTTATGGAAGTACACCGGCAGCAGAGCCAGCGCAAGTTAAACAGTGCGATGATAATTGTGATGATTCATGTGATAACTCTAGAATCTATGTTTCTAATTTGCCAACAGATGTGACAATTGATGAATTGAGAGAACTATTTGGTGGAATTGGTCAAATTGGAAGAATTAAGCAGAAGAGGGGCTACAAGGATCAGTGGCCTTGGAACATTAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAAGATCCCCAAGCAGCGCATTCTGCTGGCGGTTTCTATAACAATTATGATTTGAGAGGATATAACATCAGTGTTGCAATGGCTGAGAAGTCTGCACCGAGGGCTCCACCTGCATACAACCATGGTGGTGGTGGTAGAGGCGGATATGGAGGTGGTGGGGATAGGCGCAGAGATAGCTATAGGGATGGAGCCTCTGGACCTGATAGACATCAGCATGGTGGAAATCGATCTCGTCCTTACTGA

Coding sequence (CDS)

ATGTCTGGGATGTACGATCAAGGAGGAGACGCTGCTCCTCCGTCTTACGGTGCCCCTGGGGGTGGTGGGGGATACGGTGGTGGTGGTTATGGTGGAAAAGGTGGTGACGGTGGATATGGAGGCGGAGGCCGGGGAGGCGGCGGCGGTAGAGGCTATGGTGGACGAGGTGGCGGCGGAGGTGGAGGCTACGGTGGTCGAGGTGGCAGTGGCGGAGGGGGTTATCAAGGAGGAGATCGCGGAGGGCGAGGCAGTGGACGTGGTGGCGGAGGTGGTCGTGGCGGAAGCGGCAGAGATGGTGATTGGGTCTGCCCTAATCCTGGCTGCGGGAATTTGAACTTTGCTAGGAGAGTGGAGTGTAATAAGTGTGGTGCACCCTCACCTGGGGGTGCTAGCAGTGGTGGTGGTGGTTTTAATAGAGGTGGAGCTGATGGTGGTTATAATAGAGGTGGAGGTGATGGGGGTTACAACAGAGGTGGAGGTGATGGGGGTTACAATAGAGGTGGAGGTGATGGGGGTTACAATAGAGGTGGAGGTGATGGGGGTTACGGTGGTAATCGTAATGGCAGAGGTGGTAGTTTCCATGGTGGTCGAAGTGGAACTCATGATGGAGGCCGAAATGAAGGAGGGAACAGAGGTGTTAACTCGTATGGTGGTCACCAGGGAGGAGAAGATAGTGGTTACAGTCAGGTTCCCCCTTCCTCGGCACCCTCATCTGGTGGCCTTGCTGGCTCTTATCCACCATCTTACCATGGTGGAAGTGCAGATTACGGGACTGATGCAGTTCCTCCTCCTGCAAGCTACAGTGGAACTACATACCCTCCAACTTATGGTGGTCCATCTGGTGGCTATGGTGGTGATAGTCTAGGTGATGGGCGGAGTTCTGCCGGTCGGGGTGGACCATCAGCTGGATATGACGGCGGCTACAATGCAGGTGGTAGAGGTGGCTATAATTCTGGTGGTAGAGGAGGAGGAAGCTATAATACTGGTGGTGGTAGAGGTGGCGGTTATGGAAGTACACCGGCAGCAGAGCCAGCGCAAGTTAAACAGTGCGATGATAATTGTGATGATTCATGTGATAACTCTAGAATCTATGTTTCTAATTTGCCAACAGATGTGACAATTGATGAATTGAGAGAACTATTTGGTGGAATTGGTCAAATTGGAAGAATTAAGCAGAAGAGGGGCTACAAGGATCAGTGGCCTTGGAACATTAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAAGATCCCCAAGCAGCGCATTCTGCTGGCGGTTTCTATAACAATTATGATTTGAGAGGATATAACATCAGTGTTGCAATGGCTGAGAAGTCTGCACCGAGGGCTCCACCTGCATACAACCATGGTGGTGGTGGTAGAGGCGGATATGGAGGTGGTGGGGATAGGCGCAGAGATAGCTATAGGGATGGAGCCTCTGGACCTGATAGACATCAGCATGGTGGAAATCGATCTCGTCCTTACTGA

Protein sequence

MSGMYDQGGDAAPPSYGAPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYGGRGGGGGGGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGGGDGGYNRGGGDGGYNRGGGDGGYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGHQGGEDSGYSQVPPSSAPSSGGLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSSAGRGGPSAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGASGPDRHQHGGNRSRPY

Homology

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BLAST of Csor.00g017160 vs. ExPASy Swiss-Prot
Match: Q94KD0 (Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana OX=3702 GN=TAF15B PE=1 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 2.2e-96
Identity = 296/511 (57.93%), Postives = 331/511 (64.77%), Query Frame = 0


Query: 1   MSGMYDQ--GGDAAPPSYGAPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYGGRGG- 60
           M+GMY+Q  GG A  PSYG  G G   GGGGYG  GGD GY  GGRG  GG  YGGRGG 
Sbjct: 1   MAGMYNQDGGGGAPIPSYGGDGYG---GGGGYG--GGDAGY--GGRGASGGGSYGGRGGY 60

Query: 61  GGGGGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRV 120
           GGGGG G RGG GGGGYQGGDRGGRGS        GG GRDGDW CPNP CGN+NFARRV
Sbjct: 61  GGGGGRGNRGG-GGGGYQGGDRGGRGS--------GGGGRDGDWRCPNPSCGNVNFARRV 120

Query: 121 ECNKCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGGGDGGYNRGGGDGGYNRGG 180
           ECNKCGA +P G SSG                      +RGG  GGY+RGGGD   +RGG
Sbjct: 121 ECNKCGALAPSGTSSGAN--------------------DRGG--GGYSRGGGDS--DRGG 180

Query: 181 GDGGYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGHQGGEDSGYSQVPPSSA-- 240
           G GG    RN  G S+   R   +DGG   GG     SYG     E+  Y Q PP +A  
Sbjct: 181 GRGG----RNDSGRSYESSR---YDGGSRSGG-----SYGSGSQRENGSYGQAPPPAAAI 240

Query: 241 PSSGGLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSSA 300
           PS  G +GSYPP        YG +AVPPP SYSG   PP+YGGP GGYG D+     S+ 
Sbjct: 241 PSYDG-SGSYPP-----PTGYGMEAVPPPTSYSGG--PPSYGGPRGGYGSDA----PSTG 300

Query: 301 GRGGPSAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCD 360
           GRGG S GYDGG         ++  R   SY               A   +VKQCD +CD
Sbjct: 301 GRGGRSGGYDGG---------SAPRRQEASYED-------------AATEKVKQCDADCD 360

Query: 361 DSCDNSRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNK 420
           D+CDN+RIY+SNLP DVT DEL++LFGGIGQ+GRIKQKRGYKDQWP+NIKIYTDE GN K
Sbjct: 361 DNCDNARIYISNLPPDVTTDELKDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYK 420

Query: 421 GDACVSYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPAYNHG---GGGRGGY- 480
           GDAC++YEDP AAHSAGGF+NNY++RG  ISV MAEKSAPRAP     G   GGG GGY 
Sbjct: 421 GDACLAYEDPSAAHSAGGFFNNYEMRGNKISVTMAEKSAPRAPTFDQRGGGRGGGGGGYG 422

Query: 481 GGGGDRRRDSYRDGASGPDRHQHGGNRSRPY 503
           GGGGDRRRD+Y   +SGPDR+ HGGNRSRPY
Sbjct: 481 GGGGDRRRDNY---SSGPDRNHHGGNRSRPY 422

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BLAST of Csor.00g017160 vs. ExPASy Swiss-Prot
Match: Q92804 (TATA-binding protein-associated factor 2N OS=Homo sapiens OX=9606 GN=TAF15 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.1e-06
Identity = 127/285 (44.56%), Postives = 137/285 (48.07%), Query Frame = 0


Query: 55  RGGGGGGGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFA 114
           RGGG GGG  GRGG                GRGG  GRGG  + GDWVCPNP CGN+NFA
Sbjct: 326 RGGGSGGGRRGRGGY--------------RGRGGFQGRGGDPKSGDWVCPNPSCGNMNFA 385

Query: 115 RRVECNKCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGGGDGGYNRGGGDGGYN 174
           RR  CN+C  P P  +   GG F RG    GY   GG+ GY   GG     RGG  GGY 
Sbjct: 386 RRNSCNQCNEPRPEDSRPSGGDF-RG---RGY---GGERGYRGRGG-----RGGDRGGYG 445

Query: 175 RGGGDGGYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGHQGGEDSGYSQVPPSS 234
                GGYGG+R+  GG + G RSG   GG   GG  G +  GG+ G    GY       
Sbjct: 446 GDRSGGGYGGDRSS-GGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYG---GDR 505

Query: 235 APSSGGLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDG--R 294
               GG  G Y     GG   YG D       Y G      YGG  GGYGGD  G G  R
Sbjct: 506 GGGYGGDRGGYGGDRGGG---YGGDR----GGYGGDR--GGYGGDRGGYGGDRGGYGGDR 565

Query: 295 SSAGRGGPSAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYG 338
           S  G GG   G   GY     GGY  G R GG Y  GG RGGGYG
Sbjct: 566 SRGGYGGDRGG-GSGYGGDRSGGY-GGDRSGGGY--GGDRGGGYG 567

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BLAST of Csor.00g017160 vs. NCBI nr
Match: KAG6583343.1 (TATA-binding protein-associated factor 2N, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 892 bits (2306), Expect = 0.0
Identity = 502/502 (100.00%), Postives = 502/502 (100.00%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPPSYGAPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYGGRGGGGG 60
           MSGMYDQGGDAAPPSYGAPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYGGRGGGGG
Sbjct: 1   MSGMYDQGGDAAPPSYGAPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYGGRGGGGG 60

Query: 61  GGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECN 120
           GGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECN
Sbjct: 61  GGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECN 120

Query: 121 KCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGGGDGGYNRGGGDGGYNRGGGDG 180
           KCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGGGDGGYNRGGGDGGYNRGGGDG
Sbjct: 121 KCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGGGDGGYNRGGGDGGYNRGGGDG 180

Query: 181 GYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGHQGGEDSGYSQVPPSSAPSSGG 240
           GYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGHQGGEDSGYSQVPPSSAPSSGG
Sbjct: 181 GYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGHQGGEDSGYSQVPPSSAPSSGG 240

Query: 241 LAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSSAGRGGP 300
           LAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSSAGRGGP
Sbjct: 241 LAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSSAGRGGP 300

Query: 301 SAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDN 360
           SAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDN
Sbjct: 301 SAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDN 360

Query: 361 SRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 420
           SRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV
Sbjct: 361 SRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 420

Query: 421 SYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRD 480
           SYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRD
Sbjct: 421 SYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRD 480

Query: 481 SYRDGASGPDRHQHGGNRSRPY 502
           SYRDGASGPDRHQHGGNRSRPY
Sbjct: 481 SYRDGASGPDRHQHGGNRSRPY 502

[Close]

BLAST of Csor.00g017160 vs. NCBI nr
Match: XP_022964823.1 (transcription initiation factor TFIID subunit 15b-like [Cucurbita moschata])

HSP 1 Score: 848 bits (2191), Expect = 6.50e-308
Identity = 483/502 (96.22%), Postives = 484/502 (96.41%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPPSYGAPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYGGRGGGGG 60
           MSGMYDQGGDAAPPSYGAPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYGGRGGGGG
Sbjct: 1   MSGMYDQGGDAAPPSYGAPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYGGRGGGGG 60

Query: 61  GGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECN 120
           GGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECN
Sbjct: 61  GGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECN 120

Query: 121 KCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGGGDGGYNRGGGDGGYNRGGGDG 180
           KCGAPSPGGAS GGGG            GGG GG+NRGG DGGYNRGGGDGGYNRGGGDG
Sbjct: 121 KCGAPSPGGASGGGGG------------GGGGGGFNRGGADGGYNRGGGDGGYNRGGGDG 180

Query: 181 GYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGHQGGEDSGYSQVPPSSAPSSGG 240
           GYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRG NSYGGHQGGEDSGYSQVPPSSAPSSGG
Sbjct: 181 GYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGG 240

Query: 241 LAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSSAGRGGP 300
           LAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGY GDSLGDGRSSAGRGGP
Sbjct: 241 LAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYSGDSLGDGRSSAGRGGP 300

Query: 301 SAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDN 360
           SAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDN
Sbjct: 301 SAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDN 360

Query: 361 SRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 420
           SRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV
Sbjct: 361 SRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 420

Query: 421 SYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRD 480
           SYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPP YNHGGGGRGGYGGGGDRRRD
Sbjct: 421 SYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRD 480

Query: 481 SYRDGASGPDRHQHGGNRSRPY 502
           SYRDGASGPDRHQHGGNRSRPY
Sbjct: 481 SYRDGASGPDRHQHGGNRSRPY 490

[Close]

BLAST of Csor.00g017160 vs. NCBI nr
Match: XP_023519697.1 (transcription initiation factor TFIID subunit 15b [Cucurbita pepo subsp. pepo])

HSP 1 Score: 837 bits (2161), Expect = 2.07e-303
Identity = 478/503 (95.03%), Postives = 480/503 (95.43%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPPSYGAPGGGGGYGGGG-YGGKGGDGGYGGGGRGGGGGRGYGGRGGGG 60
           MSGMYDQGGDAAPPSYGAPGGGGGYGGGG YGGKGGDGGYGGGGRG GGGRG+GGRGGGG
Sbjct: 1   MSGMYDQGGDAAPPSYGAPGGGGGYGGGGGYGGKGGDGGYGGGGRGVGGGRGFGGRGGGG 60

Query: 61  GGGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVEC 120
           GGGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVEC
Sbjct: 61  GGGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVEC 120

Query: 121 NKCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGGGDGGYNRGGGDGGYNRGGGD 180
           NKCGAPSPGGAS GGGG                 G+NRGG DGGYNRGGGDGGYNRGGGD
Sbjct: 121 NKCGAPSPGGASGGGGG-----------------GFNRGGADGGYNRGGGDGGYNRGGGD 180

Query: 181 GGYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGHQGGEDSGYSQVPPSSAPSSG 240
           GGYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRG NSYGGHQGGEDSGYSQVPPSSAPSSG
Sbjct: 181 GGYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSG 240

Query: 241 GLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSSAGRGG 300
           GLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSSAGRGG
Sbjct: 241 GLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSSAGRGG 300

Query: 301 PSAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCD 360
           PSAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCD
Sbjct: 301 PSAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCD 360

Query: 361 NSRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDAC 420
           NSRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDAC
Sbjct: 361 NSRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDAC 420

Query: 421 VSYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRR 480
           VSYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPP YNHGGGGRGGYGGGGDRRR
Sbjct: 421 VSYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRR 480

Query: 481 DSYRDGASGPDRHQHGGNRSRPY 502
           DSYRDGASGPDRHQHGGNRSRPY
Sbjct: 481 DSYRDGASGPDRHQHGGNRSRPY 486

[Close]

BLAST of Csor.00g017160 vs. NCBI nr
Match: XP_022970611.1 (transcription initiation factor TFIID subunit 15b-like isoform X1 [Cucurbita maxima] >XP_022970613.1 transcription initiation factor TFIID subunit 15b-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 814 bits (2102), Expect = 1.48e-294
Identity = 465/503 (92.45%), Postives = 469/503 (93.24%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPPSYGAPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYGGRGGGGG 60
           MSGMYDQGGDAAPPSYG PGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGY GRGGGGG
Sbjct: 1   MSGMYDQGGDAAPPSYGVPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYAGRGGGGG 60

Query: 61  GGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECN 120
           GGYGGRGGSGGG YQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECN
Sbjct: 61  GGYGGRGGSGGGSYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECN 120

Query: 121 KCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGGGDGGYNRGGGDGGYNRGGGDG 180
           KCGAPSPGGAS GGGG                         GG+NRGGGDGGYNRGGGDG
Sbjct: 121 KCGAPSPGGASGGGGG-------------------------GGFNRGGGDGGYNRGGGDG 180

Query: 181 GYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGHQGGEDSGYSQVPPSSAPSSGG 240
           GYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRG NSYGGHQGGEDSG+SQVPPSSAPSSGG
Sbjct: 181 GYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGGNSYGGHQGGEDSGHSQVPPSSAPSSGG 240

Query: 241 LAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSSAGRGGP 300
           LAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRS+AGRGGP
Sbjct: 241 LAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSAAGRGGP 300

Query: 301 SAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDN 360
           SAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGG YGSTPAAEPAQVKQCDDNCDDSCDN
Sbjct: 301 SAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGSYGSTPAAEPAQVKQCDDNCDDSCDN 360

Query: 361 SRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 420
           SRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV
Sbjct: 361 SRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 420

Query: 421 SYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPAYNHGGGGRGG-YGGGGDRRR 480
           SYEDPQAAHSAGGFYNNYDLRGY+ISVAMAEKSAPRAPP YNHGGGGRGG YGGGGDRRR
Sbjct: 421 SYEDPQAAHSAGGFYNNYDLRGYSISVAMAEKSAPRAPPTYNHGGGGRGGGYGGGGDRRR 478

Query: 481 DSYRDGASGPDRHQHGGNRSRPY 502
           DSYRDG SGPDRHQHGGNRSRPY
Sbjct: 481 DSYRDGTSGPDRHQHGGNRSRPY 478

[Close]

BLAST of Csor.00g017160 vs. NCBI nr
Match: KAG7019111.1 (RNA-binding protein EWS [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 751 bits (1939), Expect = 7.61e-271
Identity = 394/403 (97.77%), Postives = 394/403 (97.77%), Query Frame = 0


Query: 100 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGG 159
           DWVCPNPGCGNLNFARRVECNKCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGG
Sbjct: 17  DWVCPNPGCGNLNFARRVECNKCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGG 76

Query: 160 GDGGYNRGGGDGGYNRGGGDGGYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGH 219
           GDGGYNRGGG         DGGYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGH
Sbjct: 77  GDGGYNRGGG---------DGGYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGH 136

Query: 220 QGGEDSGYSQVPPSSAPSSGGLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGP 279
           QGGEDSGYSQVPPSSAPSSGGLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGP
Sbjct: 137 QGGEDSGYSQVPPSSAPSSGGLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGP 196

Query: 280 SGGYGGDSLGDGRSSAGRGGPSAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGST 339
           SGGYGGDSLGDGRSSAGRGGPSAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGST
Sbjct: 197 SGGYGGDSLGDGRSSAGRGGPSAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGST 256

Query: 340 PAAEPAQVKQCDDNCDDSCDNSRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQ 399
           PAAEPAQVKQCDDNCDDSCDNSRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQ
Sbjct: 257 PAAEPAQVKQCDDNCDDSCDNSRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQ 316

Query: 400 WPWNIKIYTDEMGNNKGDACVSYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPP 459
           WPWNIKIYTDEMGNNKGDACVSYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPP
Sbjct: 317 WPWNIKIYTDEMGNNKGDACVSYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPP 376

Query: 460 AYNHGGGGRGGYGGGGDRRRDSYRDGASGPDRHQHGGNRSRPY 502
           AYNHGGGGRGGYGGGGDRRRDSYRDGASGPDRHQHGGNRSRPY
Sbjct: 377 AYNHGGGGRGGYGGGGDRRRDSYRDGASGPDRHQHGGNRSRPY 410

[Close]

BLAST of Csor.00g017160 vs. ExPASy TrEMBL
Match: A0A6J1HM15 (transcription initiation factor TFIID subunit 15b-like OS=Cucurbita moschata OX=3662 GN=LOC111464812 PE=4 SV=1)

HSP 1 Score: 848 bits (2191), Expect = 3.15e-308
Identity = 483/502 (96.22%), Postives = 484/502 (96.41%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPPSYGAPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYGGRGGGGG 60
           MSGMYDQGGDAAPPSYGAPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYGGRGGGGG
Sbjct: 1   MSGMYDQGGDAAPPSYGAPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYGGRGGGGG 60

Query: 61  GGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECN 120
           GGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECN
Sbjct: 61  GGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECN 120

Query: 121 KCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGGGDGGYNRGGGDGGYNRGGGDG 180
           KCGAPSPGGAS GGGG            GGG GG+NRGG DGGYNRGGGDGGYNRGGGDG
Sbjct: 121 KCGAPSPGGASGGGGG------------GGGGGGFNRGGADGGYNRGGGDGGYNRGGGDG 180

Query: 181 GYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGHQGGEDSGYSQVPPSSAPSSGG 240
           GYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRG NSYGGHQGGEDSGYSQVPPSSAPSSGG
Sbjct: 181 GYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGG 240

Query: 241 LAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSSAGRGGP 300
           LAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGY GDSLGDGRSSAGRGGP
Sbjct: 241 LAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYSGDSLGDGRSSAGRGGP 300

Query: 301 SAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDN 360
           SAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDN
Sbjct: 301 SAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDN 360

Query: 361 SRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 420
           SRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV
Sbjct: 361 SRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 420

Query: 421 SYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRD 480
           SYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPP YNHGGGGRGGYGGGGDRRRD
Sbjct: 421 SYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRD 480

Query: 481 SYRDGASGPDRHQHGGNRSRPY 502
           SYRDGASGPDRHQHGGNRSRPY
Sbjct: 481 SYRDGASGPDRHQHGGNRSRPY 490

[Close]

BLAST of Csor.00g017160 vs. ExPASy TrEMBL
Match: A0A6J1I126 (transcription initiation factor TFIID subunit 15b-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469548 PE=4 SV=1)

HSP 1 Score: 814 bits (2102), Expect = 7.17e-295
Identity = 465/503 (92.45%), Postives = 469/503 (93.24%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPPSYGAPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYGGRGGGGG 60
           MSGMYDQGGDAAPPSYG PGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGY GRGGGGG
Sbjct: 1   MSGMYDQGGDAAPPSYGVPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYAGRGGGGG 60

Query: 61  GGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECN 120
           GGYGGRGGSGGG YQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECN
Sbjct: 61  GGYGGRGGSGGGSYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECN 120

Query: 121 KCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGGGDGGYNRGGGDGGYNRGGGDG 180
           KCGAPSPGGAS GGGG                         GG+NRGGGDGGYNRGGGDG
Sbjct: 121 KCGAPSPGGASGGGGG-------------------------GGFNRGGGDGGYNRGGGDG 180

Query: 181 GYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGHQGGEDSGYSQVPPSSAPSSGG 240
           GYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRG NSYGGHQGGEDSG+SQVPPSSAPSSGG
Sbjct: 181 GYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGGNSYGGHQGGEDSGHSQVPPSSAPSSGG 240

Query: 241 LAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSSAGRGGP 300
           LAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRS+AGRGGP
Sbjct: 241 LAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSAAGRGGP 300

Query: 301 SAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDN 360
           SAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGG YGSTPAAEPAQVKQCDDNCDDSCDN
Sbjct: 301 SAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGSYGSTPAAEPAQVKQCDDNCDDSCDN 360

Query: 361 SRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 420
           SRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV
Sbjct: 361 SRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACV 420

Query: 421 SYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPAYNHGGGGRGG-YGGGGDRRR 480
           SYEDPQAAHSAGGFYNNYDLRGY+ISVAMAEKSAPRAPP YNHGGGGRGG YGGGGDRRR
Sbjct: 421 SYEDPQAAHSAGGFYNNYDLRGYSISVAMAEKSAPRAPPTYNHGGGGRGGGYGGGGDRRR 478

Query: 481 DSYRDGASGPDRHQHGGNRSRPY 502
           DSYRDG SGPDRHQHGGNRSRPY
Sbjct: 481 DSYRDGTSGPDRHQHGGNRSRPY 478

[Close]

BLAST of Csor.00g017160 vs. ExPASy TrEMBL
Match: A0A1S3C4S9 (transcription initiation factor TFIID subunit 15b isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497038 PE=4 SV=1)

HSP 1 Score: 749 bits (1934), Expect = 4.21e-269
Identity = 444/524 (84.73%), Postives = 452/524 (86.26%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPPSYGAPGGGGGYGGGG-------------YGGKGGDGGYGGGGRGGG 60
           MSGMYDQGGDAAP SYGAPGGGGGYGGGG             YGGKGGDGGYGGGGRGGG
Sbjct: 1   MSGMYDQGGDAAP-SYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGG 60

Query: 61  GG--RGYGGRGGGGGGGYGGRGGSGG-------GGYQGGDRGGRGSGRGGGGGRGGSGRD 120
           GG  RGYGGRGGGGGGGYGGRGG GG       GGYQGGDRGGRG+GRGGGGGRGGSGRD
Sbjct: 61  GGGGRGYGGRGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRD 120

Query: 121 GDWVCPNPGCGNLNFARRVECNKCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRG 180
           GDWVCPNPGCGNLNFARRVECNKCGAPSPGGAS  GGG                      
Sbjct: 121 GDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRGGG---------------------- 180

Query: 181 GGDGGYNRGGGDGGYNRGGGDGGYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGG 240
                     G GGYNRGGGD GYGG+RNGRGGSFHGGRSGTHDGGRNEGG+RG NSYGG
Sbjct: 181 ----------GGGGYNRGGGDSGYGGSRNGRGGSFHGGRSGTHDGGRNEGGSRGGNSYGG 240

Query: 241 HQGGEDSGYSQVPPSSAPSSGGLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGG 300
           HQGGEDSGY QVPPSSAPSSGGLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGG
Sbjct: 241 HQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGG 300

Query: 301 PSGGYGGDSLGDGRSSAGRGGPSAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGS 360
           P+GGYGGDSLGDGR +AGRGGPS GYDGGYNAGGRGGYN+GGRGG SYN  GGRGGGYGS
Sbjct: 301 PTGGYGGDSLGDGRGAAGRGGPSGGYDGGYNAGGRGGYNAGGRGG-SYNASGGRGGGYGS 360

Query: 361 TPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKD 420
           T AAEPAQVKQCDDNCDDSCDNSRIYVSNLP DVTIDELRELFGGIGQIGRIKQKRGYKD
Sbjct: 361 TQAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRELFGGIGQIGRIKQKRGYKD 420

Query: 421 QWPWNIKIYTDEMGNNKGDACVSYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAP 480
           QWPWNIKIYTDEMGNNKGDACVSYEDP AAHSAGGFYNNYDLRGY+I+VAMAEKSAPRAP
Sbjct: 421 QWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRGYSINVAMAEKSAPRAP 480

Query: 481 PAYNHGGGGRGGYGGGGDRRRDSYRDGASGPDRHQHGGNRSRPY 502
           P YNHGGGGRGGYGGGGDRRRDSYRDG SGPDRHQHGGNRSRPY
Sbjct: 481 PTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY 490

[Close]

BLAST of Csor.00g017160 vs. ExPASy TrEMBL
Match: A0A0A0LYC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533590 PE=4 SV=1)

HSP 1 Score: 741 bits (1914), Expect = 4.83e-266
Identity = 442/525 (84.19%), Postives = 451/525 (85.90%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPPSYGAPGGGGGYGGGG------------YGGKGGDGGYGGGGRGGGG 60
           MSGMYDQGGDAAP SYGAPGGGGGYGGGG            YGGKGGDGGYGGGGRGGGG
Sbjct: 1   MSGMYDQGGDAAP-SYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  G----RGYGGRGGGGGGGYGGRGGSGG-------GGYQGGDRGGRGSGRGGGGGRGGSGR 120
           G    RGYGGRGGGGG  YGGRGG GG       GGYQGGDRGGRG+GRGGGGGRGGSGR
Sbjct: 61  GGGGGRGYGGRGGGGG--YGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGR 120

Query: 121 DGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNR 180
           DGDWVCPNPGCGNLNFARRVECNKCGAPSPGGAS   GG                     
Sbjct: 121 DGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGG--------------------- 180

Query: 181 GGGDGGYNRGGGDGGYNRGGGDGGYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYG 240
                    GGG GGYNRGGGD GYGG+RNGRGGSFHGGRSGTHDGGRNEGG+RG NSYG
Sbjct: 181 ---------GGGGGGYNRGGGDSGYGGSRNGRGGSFHGGRSGTHDGGRNEGGSRGGNSYG 240

Query: 241 GHQGGEDSGYSQVPPSSAPSSGGLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYG 300
           GHQGGEDSGY QVPPSSAPSSGGLAGSYPPSYHGGS+DYGTDAVPPPASYSGTTYPPTYG
Sbjct: 241 GHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSSDYGTDAVPPPASYSGTTYPPTYG 300

Query: 301 GPSGGYGGDSLGDGRSSAGRGGPSAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYG 360
           GP+GGYGGDSLGDGR +A RGGPSAGYDGGYNAGGRGGYN+GGRGG SYN  GGR GGYG
Sbjct: 301 GPTGGYGGDSLGDGRGAAARGGPSAGYDGGYNAGGRGGYNAGGRGG-SYNASGGRAGGYG 360

Query: 361 STPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYK 420
           STPAAEPAQVKQCDDNCDDSCDNSRIYVSNLP DVT DELRELFGGIGQIGRIKQKRGYK
Sbjct: 361 STPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTTDELRELFGGIGQIGRIKQKRGYK 420

Query: 421 DQWPWNIKIYTDEMGNNKGDACVSYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRA 480
           DQWPWNIKIYTDEMGNNKGDACVSYEDP AAHSAGGFYNNYDLRGY+I+VAMAEKSAPRA
Sbjct: 421 DQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRGYSINVAMAEKSAPRA 480

Query: 481 PPAYNHGGGGRGGYGGGGDRRRDSYRDGASGPDRHQHGGNRSRPY 502
           PPAYNHGGGGRGGYGGGGDRRRDSYRDG SGPDRHQHGGNRSRPY
Sbjct: 481 PPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY 491

[Close]

BLAST of Csor.00g017160 vs. ExPASy TrEMBL
Match: A0A1S4E2C0 (transcription initiation factor TFIID subunit 15b isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497038 PE=4 SV=1)

HSP 1 Score: 731 bits (1887), Expect = 1.97e-262
Identity = 424/515 (82.33%), Postives = 432/515 (83.88%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPPSYGAPGGGGGYGGGG-------------YGGKGGDGGYGGGGRGGG 60
           MSGMYDQGGDAAP SYGAPGGGGGYGGGG             YGGKGGDGGYGGGGRGGG
Sbjct: 1   MSGMYDQGGDAAP-SYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGG 60

Query: 61  GGRGYGGRGGGGGGGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPG 120
           GG                     GGGYQGGDRGGRG+GRGGGGGRGGSGRDGDWVCPNPG
Sbjct: 61  GG---------------------GGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPG 120

Query: 121 CGNLNFARRVECNKCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGGGDGGYNRG 180
           CGNLNFARRVECNKCGAPSPGGAS  GGG                               
Sbjct: 121 CGNLNFARRVECNKCGAPSPGGASDRGGG------------------------------- 180

Query: 181 GGDGGYNRGGGDGGYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGHQGGEDSGY 240
            G GGYNRGGGD GYGG+RNGRGGSFHGGRSGTHDGGRNEGG+RG NSYGGHQGGEDSGY
Sbjct: 181 -GGGGYNRGGGDSGYGGSRNGRGGSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGY 240

Query: 241 SQVPPSSAPSSGGLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDS 300
            QVPPSSAPSSGGLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGP+GGYGGDS
Sbjct: 241 GQVPPSSAPSSGGLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDS 300

Query: 301 LGDGRSSAGRGGPSAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQV 360
           LGDGR +AGRGGPS GYDGGYNAGGRGGYN+GGRGG SYN  GGRGGGYGST AAEPAQV
Sbjct: 301 LGDGRGAAGRGGPSGGYDGGYNAGGRGGYNAGGRGG-SYNASGGRGGGYGSTQAAEPAQV 360

Query: 361 KQCDDNCDDSCDNSRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIY 420
           KQCDDNCDDSCDNSRIYVSNLP DVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIY
Sbjct: 361 KQCDDNCDDSCDNSRIYVSNLPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIY 420

Query: 421 TDEMGNNKGDACVSYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPAYNHGGGG 480
           TDEMGNNKGDACVSYEDP AAHSAGGFYNNYDLRGY+I+VAMAEKSAPRAPP YNHGGGG
Sbjct: 421 TDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGGGG 460

Query: 481 RGGYGGGGDRRRDSYRDGASGPDRHQHGGNRSRPY 502
           RGGYGGGGDRRRDSYRDG SGPDRHQHGGNRSRPY
Sbjct: 481 RGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY 460

[Close]

BLAST of Csor.00g017160 vs. TAIR 10
Match: AT5G58470.1 (TBP-associated factor 15B )

HSP 1 Score: 354.4 bits (908), Expect = 1.5e-97
Identity = 296/511 (57.93%), Postives = 331/511 (64.77%), Query Frame = 0


Query: 1   MSGMYDQ--GGDAAPPSYGAPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYGGRGG- 60
           M+GMY+Q  GG A  PSYG  G G   GGGGYG  GGD GY  GGRG  GG  YGGRGG 
Sbjct: 1   MAGMYNQDGGGGAPIPSYGGDGYG---GGGGYG--GGDAGY--GGRGASGGGSYGGRGGY 60

Query: 61  GGGGGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRV 120
           GGGGG G RGG GGGGYQGGDRGGRGS        GG GRDGDW CPNP CGN+NFARRV
Sbjct: 61  GGGGGRGNRGG-GGGGYQGGDRGGRGS--------GGGGRDGDWRCPNPSCGNVNFARRV 120

Query: 121 ECNKCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGGGDGGYNRGGGDGGYNRGG 180
           ECNKCGA +P G SSG                      +RGG  GGY+RGGGD   +RGG
Sbjct: 121 ECNKCGALAPSGTSSGAN--------------------DRGG--GGYSRGGGDS--DRGG 180

Query: 181 GDGGYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGHQGGEDSGYSQVPPSSA-- 240
           G GG    RN  G S+   R   +DGG   GG     SYG     E+  Y Q PP +A  
Sbjct: 181 GRGG----RNDSGRSYESSR---YDGGSRSGG-----SYGSGSQRENGSYGQAPPPAAAI 240

Query: 241 PSSGGLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSSA 300
           PS  G +GSYPP        YG +AVPPP SYSG   PP+YGGP GGYG D+     S+ 
Sbjct: 241 PSYDG-SGSYPP-----PTGYGMEAVPPPTSYSGG--PPSYGGPRGGYGSDA----PSTG 300

Query: 301 GRGGPSAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCD 360
           GRGG S GYDGG         ++  R   SY               A   +VKQCD +CD
Sbjct: 301 GRGGRSGGYDGG---------SAPRRQEASYED-------------AATEKVKQCDADCD 360

Query: 361 DSCDNSRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNK 420
           D+CDN+RIY+SNLP DVT DEL++LFGGIGQ+GRIKQKRGYKDQWP+NIKIYTDE GN K
Sbjct: 361 DNCDNARIYISNLPPDVTTDELKDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYK 420

Query: 421 GDACVSYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPAYNHG---GGGRGGY- 480
           GDAC++YEDP AAHSAGGF+NNY++RG  ISV MAEKSAPRAP     G   GGG GGY 
Sbjct: 421 GDACLAYEDPSAAHSAGGFFNNYEMRGNKISVTMAEKSAPRAPTFDQRGGGRGGGGGGYG 422

Query: 481 GGGGDRRRDSYRDGASGPDRHQHGGNRSRPY 503
           GGGGDRRRD+Y   +SGPDR+ HGGNRSRPY
Sbjct: 481 GGGGDRRRDNY---SSGPDRNHHGGNRSRPY 422

[Close]

BLAST of Csor.00g017160 vs. TAIR 10
Match: AT5G58470.2 (TBP-associated factor 15B )

HSP 1 Score: 354.4 bits (908), Expect = 1.5e-97
Identity = 296/511 (57.93%), Postives = 331/511 (64.77%), Query Frame = 0


Query: 1   MSGMYDQ--GGDAAPPSYGAPGGGGGYGGGGYGGKGGDGGYGGGGRGGGGGRGYGGRGG- 60
           M+GMY+Q  GG A  PSYG  G G   GGGGYG  GGD GY  GGRG  GG  YGGRGG 
Sbjct: 1   MAGMYNQDGGGGAPIPSYGGDGYG---GGGGYG--GGDAGY--GGRGASGGGSYGGRGGY 60

Query: 61  GGGGGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRV 120
           GGGGG G RGG GGGGYQGGDRGGRGS        GG GRDGDW CPNP CGN+NFARRV
Sbjct: 61  GGGGGRGNRGG-GGGGYQGGDRGGRGS--------GGGGRDGDWRCPNPSCGNVNFARRV 120

Query: 121 ECNKCGAPSPGGASSGGGGFNRGGADGGYNRGGGDGGYNRGGGDGGYNRGGGDGGYNRGG 180
           ECNKCGA +P G SSG                      +RGG  GGY+RGGGD   +RGG
Sbjct: 121 ECNKCGALAPSGTSSGAN--------------------DRGG--GGYSRGGGDS--DRGG 180

Query: 181 GDGGYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGVNSYGGHQGGEDSGYSQVPPSSA-- 240
           G GG    RN  G S+   R   +DGG   GG     SYG     E+  Y Q PP +A  
Sbjct: 181 GRGG----RNDSGRSYESSR---YDGGSRSGG-----SYGSGSQRENGSYGQAPPPAAAI 240

Query: 241 PSSGGLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSSA 300
           PS  G +GSYPP        YG +AVPPP SYSG   PP+YGGP GGYG D+     S+ 
Sbjct: 241 PSYDG-SGSYPP-----PTGYGMEAVPPPTSYSGG--PPSYGGPRGGYGSDA----PSTG 300

Query: 301 GRGGPSAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCD 360
           GRGG S GYDGG         ++  R   SY               A   +VKQCD +CD
Sbjct: 301 GRGGRSGGYDGG---------SAPRRQEASYED-------------AATEKVKQCDADCD 360

Query: 361 DSCDNSRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNK 420
           D+CDN+RIY+SNLP DVT DEL++LFGGIGQ+GRIKQKRGYKDQWP+NIKIYTDE GN K
Sbjct: 361 DNCDNARIYISNLPPDVTTDELKDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYK 420

Query: 421 GDACVSYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPAYNHG---GGGRGGY- 480
           GDAC++YEDP AAHSAGGF+NNY++RG  ISV MAEKSAPRAP     G   GGG GGY 
Sbjct: 421 GDACLAYEDPSAAHSAGGFFNNYEMRGNKISVTMAEKSAPRAPTFDQRGGGRGGGGGGYG 422

Query: 481 GGGGDRRRDSYRDGASGPDRHQHGGNRSRPY 503
           GGGGDRRRD+Y   +SGPDR+ HGGNRSRPY
Sbjct: 481 GGGGDRRRDNY---SSGPDRNHHGGNRSRPY 422

The following BLAST results are available for this feature:

BLAST of Csor.00g017160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94KD0	2.2e-96	57.93	Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana OX=370...	[more]
Q92804	2.1e-06	44.56	TATA-binding protein-associated factor 2N OS=Homo sapiens OX=9606 GN=TAF15 PE=1 ...	[more]

BLAST of Csor.00g017160 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583343.1	0.0	100.00	TATA-binding protein-associated factor 2N, partial [Cucurbita argyrosperma subsp...	[more]
XP_022964823.1	6.50e-308	96.22	transcription initiation factor TFIID subunit 15b-like [Cucurbita moschata]	[more]
XP_023519697.1	2.07e-303	95.03	transcription initiation factor TFIID subunit 15b [Cucurbita pepo subsp. pepo]	[more]
XP_022970611.1	1.48e-294	92.45	transcription initiation factor TFIID subunit 15b-like isoform X1 [Cucurbita max...	[more]
KAG7019111.1	7.61e-271	97.77	RNA-binding protein EWS [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Csor.00g017160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HM15	3.15e-308	96.22	transcription initiation factor TFIID subunit 15b-like OS=Cucurbita moschata OX=...	[more]
A0A6J1I126	7.17e-295	92.45	transcription initiation factor TFIID subunit 15b-like isoform X1 OS=Cucurbita m...	[more]
A0A1S3C4S9	4.21e-269	84.73	transcription initiation factor TFIID subunit 15b isoform X1 OS=Cucumis melo OX=...	[more]
A0A0A0LYC4	4.83e-266	84.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533590 PE=4 SV=1	[more]
A0A1S4E2C0	1.97e-262	82.33	transcription initiation factor TFIID subunit 15b isoform X2 OS=Cucumis melo OX=...	[more]

BLAST of Csor.00g017160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58470.1	1.5e-97	57.93	TBP-associated factor 15B	[more]
AT5G58470.2	1.5e-97	57.93	TBP-associated factor 15B	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 99..125 e-value: 1.8E-7 score: 40.8
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 97..128 e-value: 3.8E-8 score: 32.5
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 101..122
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 97..128 score: 10.150199
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 362..448 e-value: 1.6E-8 score: 44.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 363..392 e-value: 8.9E-6 score: 25.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 361..452 score: 13.958878
None	No IPR available	GENE3D	4.10.1060.10		coord: 95..129 e-value: 3.2E-15 score: 57.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 473..502
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 453..502
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..241
None	No IPR available	PANTHER	PTHR12999:SF20	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15B	coord: 14..165
None	No IPR available	PANTHER	PTHR12999	ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED	coord: 166..310 coord: 14..165
None	No IPR available	PANTHER	PTHR12999	ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED	coord: 311..502
None	No IPR available	PANTHER	PTHR12999:SF20	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15B	coord: 166..310 coord: 311..502
None	No IPR available	CDD	cd12280	RRM_FET	coord: 363..449 e-value: 3.37155E-36 score: 127.044
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 341..494 e-value: 1.5E-19 score: 72.4
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 359..480
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 90..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g017160.m01	Csor.00g017160.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003676	nucleic acid binding