Homology
BLAST of Csor.00g016890 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 920.6 bits (2378), Expect = 1.1e-266
Identity = 439/726 (60.47%), Postives = 561/726 (77.27%), Query Frame = 0
Query: 7 PLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSASKLIAA 66
P S PN+ +N + +S I++C S +QLKQ H M+RTG F DP+SASKL A
Sbjct: 16 PNFSNPNQPTTNN----ERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAM 75
Query: 67 SALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDECDDLPNN 126
+AL S ++LEYAR VFD+IP PN + WNTLIRAYAS DP S FL ++ E PN
Sbjct: 76 AALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNK 135
Query: 127 FTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMAERLFEG 186
+TFPF+IKAA+E+ + +G+++HGMA+K ++G D ++ NSL+ Y +CGDL+ A ++F
Sbjct: 136 YTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTT 195
Query: 187 ISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKKLDLEFG 246
I KDVVSWNSMI+ F Q P+ ALELF KME +V + VTMVGVLSACAK +LEFG
Sbjct: 196 IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 255
Query: 247 RWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTMLDGYAKM 306
R VCSYIE ++V+LTL NAMLDMYTKCGSI DA++LFD M E+D +WTTMLDGYA
Sbjct: 256 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 315
Query: 307 GDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDEVTLVSS 366
D+ AAR+V + MP K+I AWNA ISAYE+NGKP EAL F+ELQL K K +++TLVS+
Sbjct: 316 EDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVST 375
Query: 367 LSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYAVEEKDV 426
LSACAQ+GA++LG WIH YIK+ GI +N H+ ++LI MY+KCG LEKS EVF +VE++DV
Sbjct: 376 LSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV 435
Query: 427 YVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEGRALFHE 486
+VWSAMI GL MHG G A+++F+KMQEA VKPN VTFTN+ CACSH GLVDE +LFH+
Sbjct: 436 FVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQ 495
Query: 487 MEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACSLHMNVE 546
ME YG+VP KHYAC+VD+LGR+G+LE+A++ I MP PS SVWGALLGAC +H N+
Sbjct: 496 MESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLN 555
Query: 547 LAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGCSSVEVN 606
LAE+A +LL+LEPRN GA +LLSN+YAK G+W+ VSELRK MR + LKKEPGCSS+E++
Sbjct: 556 LAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEID 615
Query: 607 GIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEHALSLHS 666
G++HEFL GDN+HP+S +Y KL E+ KLKS GYEP S +LQ+IEE+++KE +L+LHS
Sbjct: 616 GMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHS 675
Query: 667 EKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFHHFRDGH 726
EKLAI +GLIS + IRV+KNLR+CGDCH VAKLIS++Y+R+I+V+DRYRFHHFR+G
Sbjct: 676 EKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQ 735
Query: 727 CSCPHF 733
CSC F
Sbjct: 736 CSCNDF 737
BLAST of Csor.00g016890 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 602.4 bits (1552), Expect = 6.8e-171
Identity = 310/740 (41.89%), Postives = 448/740 (60.54%), Query Frame = 0
Query: 24 RNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSASKLIAASALKSS-STLEYARDVF 83
RNH LS + C + + L+ +HAQM++ GL ++ SKLI L L YA VF
Sbjct: 32 RNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVF 91
Query: 84 DQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDECDDLPNNFTFPFVIKAASELKAS 143
I PNL WNT+ R +A S+DP + +++ ++ LPN++TFPFV+K+ ++ KA
Sbjct: 92 KTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMI-SLGLLPNSYTFPFVLKSCAKSKAF 151
Query: 144 RVGRAVHGMAIKLSLGMDQYILNS-------------------------------LVRFY 203
+ G+ +HG +KL +D Y+ S L++ Y
Sbjct: 152 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 211
Query: 204 GACGDLNMAERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMV 263
+ G + A++LF+ I KDVVSWN+MIS +A+ ++ALELF M NV P+ TMV
Sbjct: 212 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 271
Query: 264 GVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPER 323
V+SACA+ +E GR V +I+ +L + NA++D+Y+KCG + A LF+ +P +
Sbjct: 272 TVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK 331
Query: 324 DVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQ 383
DV SW T++ GY M + KEAL F E+
Sbjct: 332 DVISWNTLIGGYTHMNLY-------------------------------KEALLLFQEM- 391
Query: 384 LSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIKR--EGINLNGHLITSLIDMYAKCG 443
L P++VT++S L ACA LGAID+G WIHVYI + +G+ L TSLIDMYAKCG
Sbjct: 392 LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 451
Query: 444 ALEKSLEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLC 503
+E + +VF ++ K + W+AMI G MHGR A+ +LF +M++ ++P+D+TF LL
Sbjct: 452 DIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 511
Query: 504 ACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSA 563
ACSH+G++D GR +F M Y + P +HY CM+D+LG +G +EA E+IN M P
Sbjct: 512 ACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDG 571
Query: 564 SVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLM 623
+W +LL AC +H NVEL E ++ L+K+EP N G+ +LLSN+YA GRW++V++ R L+
Sbjct: 572 VIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALL 631
Query: 624 RDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLL 683
D +KK PGCSS+E++ +VHEF++GD HP +R+IY L+E+ L+ G+ P+ S +L
Sbjct: 632 NDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVL 691
Query: 684 QLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNR 730
Q +EE + KE AL HSEKLAIAFGLIS P + +VKNLR+C +CHE KLIS++Y R
Sbjct: 692 QEMEE-EWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKR 737
BLAST of Csor.00g016890 vs. ExPASy Swiss-Prot
Match:
O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)
HSP 1 Score: 541.6 bits (1394), Expect = 1.4e-152
Identity = 269/709 (37.94%), Postives = 429/709 (60.51%), Query Frame = 0
Query: 28 ILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPH 87
IL + C S +KQ+HA +LRT + S L S SS L YA +VF IP
Sbjct: 15 ILEKLSFCKSLNHIKQLHAHILRT--VINHKLNSFLFNLSVSSSSINLSYALNVFSSIPS 74
Query: 88 -PNLYTWNTLIRAYASSADPFQSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGR 147
P +N +R + S++P ++ ++F + + F+F ++KA S++ A G
Sbjct: 75 PPESIVFNPFLRDLSRSSEP-RATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGM 134
Query: 148 AVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMAERLFEGISCKDVVSWNSMISAFAQGN 207
+HG+A K++ D ++ + Y +CG +N A +F+ +S +DVV+WN+MI + +
Sbjct: 135 ELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 194
Query: 208 CPEDALELFLKMEGANVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCN 267
++A +LF +M+ +NVMP+ + + ++SAC + ++ + R + ++ ++ +D L
Sbjct: 195 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 254
Query: 268 AMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAA 327
A++ MY G + A + F +M R++F T M+ GY+K G + A+ +FD+ K++
Sbjct: 255 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 314
Query: 328 WNAFISAYERNGKPKEALATFNELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYI 387
W ISAY + P+EAL F E+ S I KPD V++ S +SACA LG +D W+H I
Sbjct: 315 WTTMISAYVESDYPQEALRVFEEMCCSGI-KPDVVSMFSVISACANLGILDKAKWVHSCI 374
Query: 388 KREGINLNGHLITSLIDMYAKCGALEKSLEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAI 447
G+ + +LI+MYAKCG L+ + +VF + ++V WS+MI L MHG A+
Sbjct: 375 HVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDAL 434
Query: 448 ELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDI 507
LF +M++ V+PN+VTF +L CSH+GLV+EG+ +F M Y + P +HY CMVD+
Sbjct: 435 SLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDL 494
Query: 508 LGRAGFLEEAMELINEMPTTPSASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAI 567
GRA L EA+E+I MP + +WG+L+ AC +H +EL + A+ ++L+LEP + GA+
Sbjct: 495 FGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGAL 554
Query: 568 ILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIY 627
+L+SN+YA+ RW+ V +R++M + + KE G S ++ NG HEFL+GD H S +IY
Sbjct: 555 VLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIY 614
Query: 628 SKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQP--- 687
+KLDE+ +KLK GY P+ +L +EE++ K+ L HSEKLA+ FGL++ +
Sbjct: 615 AKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVL-WHSEKLALCFGLMNEEKEEEKDS 674
Query: 688 ---IRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFHHFRDGHCSC 730
IR+VKNLR+C DCH KL+S+VY R+I+V+DR RFH +++G CSC
Sbjct: 675 CGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSC 718
BLAST of Csor.00g016890 vs. ExPASy Swiss-Prot
Match:
Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 526.2 bits (1354), Expect = 6.2e-148
Identity = 275/702 (39.17%), Postives = 418/702 (59.54%), Query Frame = 0
Query: 30 STIDQCSSGKQLKQVHAQMLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPHPN 89
S ID + QLKQ+HA++L GL F F +KLI AS+ S + +AR VFD +P P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASS--SFGDITFARQVFDDLPRPQ 85
Query: 90 LYTWNTLIRAYASSADPFQSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVH 149
++ WN +IR Y S + FQ ++ + + P++FTFP ++KA S L ++GR VH
Sbjct: 86 IFPWNAIIRGY-SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 145
Query: 150 GMAIKLSLGMDQYILNSLVRFYGACGDLNMAERLFEGISC--KDVVSWNSMISAFAQGNC 209
+L D ++ N L+ Y C L A +FEG+ + +VSW +++SA+AQ
Sbjct: 146 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 205
Query: 210 PEDALELFLKMEGANVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNA 269
P +ALE+F +M +V P+ V +V VL+A DL+ GR + + + + + ++ L +
Sbjct: 206 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 265
Query: 270 MLDMYTKCGSIGDAEKLFDEMPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAW 329
+ MY KCG + A+ LFD+M ++ W M+ GYAK
Sbjct: 266 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK---------------------- 325
Query: 330 NAFISAYERNGKPKEALATFNELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIK 389
NG +EA+ F+E+ ++K +PD +++ S++SACAQ+G+++ ++ Y+
Sbjct: 326 ---------NGYAREAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVG 385
Query: 390 REGINLNGHLITSLIDMYAKCGALEKSLEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIE 449
R + + ++LIDM+AKCG++E + VF ++DV VWSAMI G G+HGR + AI
Sbjct: 386 RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAIS 445
Query: 450 LFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDIL 509
L+ M+ V PNDVTF LL AC+H+G+V EG F+ M + + P +HYAC++D+L
Sbjct: 446 LYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLL 505
Query: 510 GRAGFLEEAMELINEMPTTPSASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAII 569
GRAG L++A E+I MP P +VWGALL AC H +VEL E A+ QL ++P N G +
Sbjct: 506 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYV 565
Query: 570 LLSNVYAKTGRWDKVSELRKLMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYS 629
LSN+YA WD+V+E+R M++ L K+ GCS VEV G + F VGD SHP +I
Sbjct: 566 QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIER 625
Query: 630 KLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVV 689
+++ I ++LK G+ NK L + +++ +E L HSE++AIA+GLIS P+R+
Sbjct: 626 QVEWIESRLKEGGFVANKDASLHDLNDEEAEE-TLCSHSERIAIAYGLISTPQGTPLRIT 685
Query: 690 KNLRICGDCHEVAKLISRVYNRDILVQDRYRFHHFRDGHCSC 730
KNLR C +CH KLIS++ +R+I+V+D RFHHF+DG CSC
Sbjct: 686 KNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSC 690
BLAST of Csor.00g016890 vs. ExPASy Swiss-Prot
Match:
Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)
HSP 1 Score: 525.4 bits (1352), Expect = 1.1e-147
Identity = 243/616 (39.45%), Postives = 395/616 (64.12%), Query Frame = 0
Query: 25 NHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQ 84
++ +LS +++C LKQ+ AQM+ GL DPF++S+LIA AL S L+Y+ +
Sbjct: 53 HNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKG 112
Query: 85 IPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDE--CDDLPNNFTFPFVIKAASELKAS 144
I +PN+++WN IR ++ S +P +SF+++ +L C+ P++FT+P + K ++L+ S
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172
Query: 145 RVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMAERLFEGISCKDVVSWNSMISAF 204
+G + G +KL L + ++ N+ + + +CGD+ A ++F+ +D+VSWN +I+ +
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232
Query: 205 AQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDL 264
+ E A+ ++ ME V P+ VTM+G++S+C+ DL G+ Y++ + + +
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 292
Query: 265 TLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVK 324
L NA++DM++KCG I +A ++FD + +R + SWTTM+ GYA+ G + +RK+FD+M K
Sbjct: 293 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 325 EIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWI 384
++ WNA I + + ++ALA F E+Q S KPDE+T++ LSAC+QLGA+D+G WI
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSN-TKPDEITMIHCLSACSQLGALDVGIWI 412
Query: 385 HVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYAVEEKDVYVWSAMIAGLGMHGRG 444
H YI++ ++LN L TSL+DMYAKCG + ++L VF+ ++ ++ ++A+I GL +HG
Sbjct: 413 HRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDA 472
Query: 445 KAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYAC 504
AI F +M +A + P+++TF LL AC H G++ GR F +M+ + + P KHY+
Sbjct: 473 STAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI 532
Query: 505 MVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACSLHMNVELAELASDQLLKLEPRN 564
MVD+LGRAG LEEA L+ MP A+VWGALL C +H NVEL E A+ +LL+L+P +
Sbjct: 533 MVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSD 592
Query: 565 HGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLS 624
G +LL +Y + W+ R++M + ++K PGCSS+EVNGIV EF+V D S P S
Sbjct: 593 SGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPES 652
Query: 625 RDIYSKLDEIAAKLKS 639
IY +L + ++S
Sbjct: 653 EKIYDRLHCLGRHMRS 667
BLAST of Csor.00g016890 vs. NCBI nr
Match:
KAG6583370.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1507 bits (3902), Expect = 0.0
Identity = 747/747 (100.00%), Postives = 747/747 (100.00%), Query Frame = 0
Query: 1 MEALSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
MEALSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA
Sbjct: 1 MEALSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
Query: 61 SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC 120
SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC
Sbjct: 61 SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC 120
Query: 121 DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA
Sbjct: 121 DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
Query: 181 ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK 240
ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK
Sbjct: 181 ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK 240
Query: 241 LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML 300
LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML
Sbjct: 241 LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML 300
Query: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDE 360
DGYAKMGDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDE
Sbjct: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDE 360
Query: 361 VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYA 420
VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYA
Sbjct: 361 VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYA 420
Query: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG 480
VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG
Sbjct: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG 480
Query: 481 RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS
Sbjct: 481 RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
Query: 541 LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC
Sbjct: 541 LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
Query: 601 SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH
Sbjct: 601 SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
Query: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH 720
ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH
Sbjct: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH 720
Query: 721 HFRDGHCSCPHFNHSLFVEFSPNNFIR 747
HFRDGHCSCPHFNHSLFVEFSPNNFIR
Sbjct: 721 HFRDGHCSCPHFNHSLFVEFSPNNFIR 747
BLAST of Csor.00g016890 vs. NCBI nr
Match:
KAG7019141.1 (T-complex protein 1 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1467 bits (3799), Expect = 0.0
Identity = 728/729 (99.86%), Postives = 729/729 (100.00%), Query Frame = 0
Query: 1 MEALSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
MEALSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA
Sbjct: 1 MEALSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
Query: 61 SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC 120
SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC
Sbjct: 61 SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC 120
Query: 121 DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA
Sbjct: 121 DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
Query: 181 ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK 240
ERLFEG+SCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK
Sbjct: 181 ERLFEGVSCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK 240
Query: 241 LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML 300
LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML
Sbjct: 241 LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML 300
Query: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDE 360
DGYAKMGDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDE
Sbjct: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDE 360
Query: 361 VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYA 420
VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYA
Sbjct: 361 VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYA 420
Query: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG 480
VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG
Sbjct: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG 480
Query: 481 RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS
Sbjct: 481 RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
Query: 541 LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC
Sbjct: 541 LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
Query: 601 SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH
Sbjct: 601 SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
Query: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH 720
ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH
Sbjct: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH 720
Query: 721 HFRDGHCSC 729
HFRDGHCSC
Sbjct: 721 HFRDGHCSC 729
BLAST of Csor.00g016890 vs. NCBI nr
Match:
XP_022964665.1 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic [Cucurbita moschata])
HSP 1 Score: 1463 bits (3787), Expect = 0.0
Identity = 726/729 (99.59%), Postives = 727/729 (99.73%), Query Frame = 0
Query: 1 MEALSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
ME LSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA
Sbjct: 1 METLSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
Query: 61 SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC 120
SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC
Sbjct: 61 SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC 120
Query: 121 DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA
Sbjct: 121 DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
Query: 181 ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK 240
ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK
Sbjct: 181 ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK 240
Query: 241 LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML 300
LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML
Sbjct: 241 LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML 300
Query: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDE 360
DGYAKMGDFNAARKVFDEMPVKEIAAWNA ISAYERNGKPKEALATFNELQLSKIAKPDE
Sbjct: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATFNELQLSKIAKPDE 360
Query: 361 VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYA 420
VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEK+LEVFYA
Sbjct: 361 VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKALEVFYA 420
Query: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG 480
VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG
Sbjct: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG 480
Query: 481 RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS
Sbjct: 481 RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
Query: 541 LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC
Sbjct: 541 LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
Query: 601 SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH
Sbjct: 601 SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
Query: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH 720
ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH
Sbjct: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH 720
Query: 721 HFRDGHCSC 729
HFRDGHCSC
Sbjct: 721 HFRDGHCSC 729
BLAST of Csor.00g016890 vs. NCBI nr
Match:
XP_023519184.1 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1448 bits (3748), Expect = 0.0
Identity = 718/729 (98.49%), Postives = 721/729 (98.90%), Query Frame = 0
Query: 1 MEALSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
MEALSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA
Sbjct: 1 MEALSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
Query: 61 SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC 120
SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASS DPFQSFVIFLALLDEC
Sbjct: 61 SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSPDPFQSFVIFLALLDEC 120
Query: 121 DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
DD PNNFTFPFVIKAASELKASRVGRA HGMAIKLSLGMDQYILNSLVRFYGACGDLNMA
Sbjct: 121 DDFPNNFTFPFVIKAASELKASRVGRAAHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
Query: 181 ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK 240
ERLFEGISCKDVVSWNSMISAFAQGN PEDALELFLKMEGANVMPNSVTMVGVLSAC KK
Sbjct: 181 ERLFEGISCKDVVSWNSMISAFAQGNSPEDALELFLKMEGANVMPNSVTMVGVLSACGKK 240
Query: 241 LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML 300
LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML
Sbjct: 241 LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML 300
Query: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDE 360
DGYAKMGDFNAARKVFDEMPVKEIAAWNA ISAYERNGKPKEALATFNELQLSKIAKPDE
Sbjct: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATFNELQLSKIAKPDE 360
Query: 361 VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYA 420
VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEK+LEVFYA
Sbjct: 361 VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKALEVFYA 420
Query: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG 480
VEEKDVYVWSAMIAGLGMHGRGKAAIELFF+MQEAKVKPNDVTFTNLLCACSHAGLVDEG
Sbjct: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELFFEMQEAKVKPNDVTFTNLLCACSHAGLVDEG 480
Query: 481 RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS
Sbjct: 481 RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
Query: 541 LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
LH NVELAELASDQLLKLEPRNHGAI+LLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC
Sbjct: 541 LHTNVELAELASDQLLKLEPRNHGAIVLLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
Query: 601 SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
SSVEVNGI HEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH
Sbjct: 601 SSVEVNGIFHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
Query: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH 720
ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH
Sbjct: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH 720
Query: 721 HFRDGHCSC 729
HFRDGHCSC
Sbjct: 721 HFRDGHCSC 729
BLAST of Csor.00g016890 vs. NCBI nr
Match:
XP_022970496.1 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic [Cucurbita maxima])
HSP 1 Score: 1437 bits (3720), Expect = 0.0
Identity = 711/729 (97.53%), Postives = 719/729 (98.63%), Query Frame = 0
Query: 1 MEALSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
ME LSAPL+SLPNRSIA+NNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA
Sbjct: 1 METLSAPLISLPNRSIANNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
Query: 61 SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC 120
SKLIAASALKSSSTLEYARD+FDQIPHPNLYTWNTLIRAYASS DPFQSF+IFLALLDE
Sbjct: 61 SKLIAASALKSSSTLEYARDMFDQIPHPNLYTWNTLIRAYASSPDPFQSFMIFLALLDEY 120
Query: 121 DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA
Sbjct: 121 DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
Query: 181 ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK 240
ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK
Sbjct: 181 ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK 240
Query: 241 LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML 300
LDLEFGRWVCSYIERKEI VDLTLCNAMLDMY KCGSIGDAEKLFDEMPERDVFSWTTML
Sbjct: 241 LDLEFGRWVCSYIERKEIRVDLTLCNAMLDMYAKCGSIGDAEKLFDEMPERDVFSWTTML 300
Query: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDE 360
DGYAKMGDFNAARKVFDEMPVKEIAAWNA ISAYERNGKPKEALATFNELQLSKIAKPDE
Sbjct: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATFNELQLSKIAKPDE 360
Query: 361 VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYA 420
VTLVSSLSACAQLG IDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEK+LEVFYA
Sbjct: 361 VTLVSSLSACAQLGTIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKALEVFYA 420
Query: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG 480
VEEKDVYVWSAMIAGLGMHGRGKAAIEL FKMQEAKVKPNDVTF N+LCACSHAGLVDEG
Sbjct: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELLFKMQEAKVKPNDVTFMNVLCACSHAGLVDEG 480
Query: 481 RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
RALFHEMEPVYGVVPG KHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS
Sbjct: 481 RALFHEMEPVYGVVPGAKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
Query: 541 LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
LHMNVELAELASDQLLKLEPRNHGAI+LLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC
Sbjct: 541 LHMNVELAELASDQLLKLEPRNHGAIVLLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
Query: 601 SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH
Sbjct: 601 SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
Query: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH 720
ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYN+DILVQDRYRFH
Sbjct: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNQDILVQDRYRFH 720
Query: 721 HFRDGHCSC 729
HFRDGHCSC
Sbjct: 721 HFRDGHCSC 729
BLAST of Csor.00g016890 vs. ExPASy TrEMBL
Match:
A0A6J1HLG4 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464676 PE=3 SV=1)
HSP 1 Score: 1463 bits (3787), Expect = 0.0
Identity = 726/729 (99.59%), Postives = 727/729 (99.73%), Query Frame = 0
Query: 1 MEALSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
ME LSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA
Sbjct: 1 METLSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
Query: 61 SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC 120
SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC
Sbjct: 61 SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC 120
Query: 121 DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA
Sbjct: 121 DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
Query: 181 ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK 240
ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK
Sbjct: 181 ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK 240
Query: 241 LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML 300
LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML
Sbjct: 241 LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML 300
Query: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDE 360
DGYAKMGDFNAARKVFDEMPVKEIAAWNA ISAYERNGKPKEALATFNELQLSKIAKPDE
Sbjct: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATFNELQLSKIAKPDE 360
Query: 361 VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYA 420
VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEK+LEVFYA
Sbjct: 361 VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKALEVFYA 420
Query: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG 480
VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG
Sbjct: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG 480
Query: 481 RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS
Sbjct: 481 RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
Query: 541 LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC
Sbjct: 541 LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
Query: 601 SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH
Sbjct: 601 SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
Query: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH 720
ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH
Sbjct: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH 720
Query: 721 HFRDGHCSC 729
HFRDGHCSC
Sbjct: 721 HFRDGHCSC 729
BLAST of Csor.00g016890 vs. ExPASy TrEMBL
Match:
A0A6J1I0R3 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111469458 PE=3 SV=1)
HSP 1 Score: 1437 bits (3720), Expect = 0.0
Identity = 711/729 (97.53%), Postives = 719/729 (98.63%), Query Frame = 0
Query: 1 MEALSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
ME LSAPL+SLPNRSIA+NNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA
Sbjct: 1 METLSAPLISLPNRSIANNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
Query: 61 SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC 120
SKLIAASALKSSSTLEYARD+FDQIPHPNLYTWNTLIRAYASS DPFQSF+IFLALLDE
Sbjct: 61 SKLIAASALKSSSTLEYARDMFDQIPHPNLYTWNTLIRAYASSPDPFQSFMIFLALLDEY 120
Query: 121 DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA
Sbjct: 121 DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
Query: 181 ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK 240
ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK
Sbjct: 181 ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK 240
Query: 241 LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML 300
LDLEFGRWVCSYIERKEI VDLTLCNAMLDMY KCGSIGDAEKLFDEMPERDVFSWTTML
Sbjct: 241 LDLEFGRWVCSYIERKEIRVDLTLCNAMLDMYAKCGSIGDAEKLFDEMPERDVFSWTTML 300
Query: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDE 360
DGYAKMGDFNAARKVFDEMPVKEIAAWNA ISAYERNGKPKEALATFNELQLSKIAKPDE
Sbjct: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATFNELQLSKIAKPDE 360
Query: 361 VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYA 420
VTLVSSLSACAQLG IDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEK+LEVFYA
Sbjct: 361 VTLVSSLSACAQLGTIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKALEVFYA 420
Query: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG 480
VEEKDVYVWSAMIAGLGMHGRGKAAIEL FKMQEAKVKPNDVTF N+LCACSHAGLVDEG
Sbjct: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELLFKMQEAKVKPNDVTFMNVLCACSHAGLVDEG 480
Query: 481 RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
RALFHEMEPVYGVVPG KHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS
Sbjct: 481 RALFHEMEPVYGVVPGAKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
Query: 541 LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
LHMNVELAELASDQLLKLEPRNHGAI+LLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC
Sbjct: 541 LHMNVELAELASDQLLKLEPRNHGAIVLLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
Query: 601 SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH
Sbjct: 601 SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
Query: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH 720
ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYN+DILVQDRYRFH
Sbjct: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNQDILVQDRYRFH 720
Query: 721 HFRDGHCSC 729
HFRDGHCSC
Sbjct: 721 HFRDGHCSC 729
BLAST of Csor.00g016890 vs. ExPASy TrEMBL
Match:
A0A0A0M0R9 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G530130 PE=3 SV=1)
HSP 1 Score: 1308 bits (3386), Expect = 0.0
Identity = 640/729 (87.79%), Postives = 684/729 (93.83%), Query Frame = 0
Query: 1 MEALSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
MEALS P +SL N S +NNL FRNHQILSTID+CSS KQLK+VHA+MLRTGLFFDPFSA
Sbjct: 1 MEALSVPSISLQNFSTLNNNLLFRNHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSA 60
Query: 61 SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC 120
SKL ASAL S STL+YAR++FDQIP PNLYTWNTLIRAYASS+DPFQSFVIFL LLD+C
Sbjct: 61 SKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKC 120
Query: 121 DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
+DLPN FTFPFVIKAASELKASRVG AVHGMAIKLS GMD YILNSLVRFYGACGDL+MA
Sbjct: 121 EDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMA 180
Query: 181 ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK 240
ERLF+GISCKDVVSWNSMISAFAQGNCPEDALELFLKME NVMPNSVTMVGVLSACAKK
Sbjct: 181 ERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKK 240
Query: 241 LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML 300
LDLEFGRWVCSYIERK I VDLTLCNAMLDMYTKCGS+ DA+KLFDEMPERDVFSWT ML
Sbjct: 241 LDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIML 300
Query: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDE 360
DGYAKMGD++AAR VF+ MPVKEIAAWN ISAYE+NGKPKEALA FNELQLSKIAKPDE
Sbjct: 301 DGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDE 360
Query: 361 VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYA 420
VTLVS+LSACAQLGAIDLGGWIHVYIKREGI LN HLI+SL+DMYAKCG+LEK+LEVFY+
Sbjct: 361 VTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYS 420
Query: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG 480
VEE+DVYVWSAMIAGLGMHGRGKAAI+LFF+MQEAKVKPN VTFTN+LCACSHAGLVDEG
Sbjct: 421 VEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEG 480
Query: 481 RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
R FHEMEPVYGVVP KHYACMVDILGRAGFLEEAMELINEM TTPSASVWGALLGACS
Sbjct: 481 RVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACS 540
Query: 541 LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
LHMNVEL ELASDQLLKLEPRNHGAI+LLSN+YAKTGRW+KVSELRKLMRD+ELKKEPGC
Sbjct: 541 LHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGC 600
Query: 601 SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
SS+E NG VHEFLVGDN+HPLS +IYSKL+EIA KLKSVGYEPNKSHLLQLIEEDD+KE
Sbjct: 601 SSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQ 660
Query: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH 720
ALSLHSEKLAIAFGL++LAPSQPIRVVKNLRICGDCH AKL+SRVY+RDIL++DRYRFH
Sbjct: 661 ALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFH 720
Query: 721 HFRDGHCSC 729
HFRDGHCSC
Sbjct: 721 HFRDGHCSC 729
BLAST of Csor.00g016890 vs. ExPASy TrEMBL
Match:
A0A5A7SKX2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00570 PE=3 SV=1)
HSP 1 Score: 1307 bits (3382), Expect = 0.0
Identity = 641/729 (87.93%), Postives = 683/729 (93.69%), Query Frame = 0
Query: 1 MEALSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
MEALS PL+SL N S +NNL FRNHQILS ID+CSS KQLK+VHA+MLRTGLFFDPFSA
Sbjct: 1 MEALSVPLISLQNFSTLNNNLPFRNHQILSAIDKCSSSKQLKEVHARMLRTGLFFDPFSA 60
Query: 61 SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC 120
SKL ASAL S STL+YAR+VFDQIP PNLYTWN LIRAYASS+DPFQSFVIFL LLD+C
Sbjct: 61 SKLFTASALSSFSTLDYARNVFDQIPQPNLYTWNILIRAYASSSDPFQSFVIFLDLLDKC 120
Query: 121 DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
+DLPNNFTFPFVIKAASELKASRVG AVHGMAIKLS GMD YILNSLVRFYGACGDL+MA
Sbjct: 121 EDLPNNFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMA 180
Query: 181 ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK 240
ERLF+GISCKDVVSWNSMISAFAQGNCPEDALELFLKME NVMPNSVTMV VLSACAKK
Sbjct: 181 ERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVCVLSACAKK 240
Query: 241 LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML 300
LDLEFGRWVCSYIERK I +DLTL NAMLDMYTKCGS+ DA+KLFDEMPERDVFSWT ML
Sbjct: 241 LDLEFGRWVCSYIERKGIKMDLTLRNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIML 300
Query: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDE 360
DGYAKMGD++AAR VF+ MPVKEIAAWN ISAYE+NGKPKEALATFNELQLSKIAKPDE
Sbjct: 301 DGYAKMGDYDAARGVFNAMPVKEIAAWNVLISAYEQNGKPKEALATFNELQLSKIAKPDE 360
Query: 361 VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYA 420
VTLVS+LSACAQLGAIDLGGWIHVYIKREGI+LN HLI+SL+DMYAKCGALEK+LEVFY+
Sbjct: 361 VTLVSTLSACAQLGAIDLGGWIHVYIKREGIDLNCHLISSLVDMYAKCGALEKALEVFYS 420
Query: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG 480
VEE+DVYVWSAMIAGLGMHGRGKAAI+LFF+MQEAKVKPN VTFTN+LCACSH GLVDEG
Sbjct: 421 VEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHTGLVDEG 480
Query: 481 RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
R FHEMEPVYGVVP TKHYACMVDILGRAGFLEEAMELINEM TPSASVWGALLGACS
Sbjct: 481 RVFFHEMEPVYGVVPETKHYACMVDILGRAGFLEEAMELINEMSITPSASVWGALLGACS 540
Query: 541 LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
LHMNVEL ELASDQLLKLEPRNHGAI+LLSN+YAKTGRW+KVSELRKLMRD+ELKKEPGC
Sbjct: 541 LHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGC 600
Query: 601 SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
SS+EVNG VHEFLVGDN HPLS +IYSKLD+IA KLK VGYEPNKSHLLQLIEEDD+KE
Sbjct: 601 SSIEVNGNVHEFLVGDNLHPLSSNIYSKLDDIATKLKPVGYEPNKSHLLQLIEEDDLKEQ 660
Query: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH 720
ALSLHSEKLAIAFGL+SLAPSQPIRVVKNLRICGDCHE AKL+SRVY+RDIL++DRYRFH
Sbjct: 661 ALSLHSEKLAIAFGLVSLAPSQPIRVVKNLRICGDCHEFAKLVSRVYDRDILLRDRYRFH 720
Query: 721 HFRDGHCSC 729
HFRDGHCSC
Sbjct: 721 HFRDGHCSC 729
BLAST of Csor.00g016890 vs. ExPASy TrEMBL
Match:
A0A5D3BBW6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001260 PE=3 SV=1)
HSP 1 Score: 1305 bits (3376), Expect = 0.0
Identity = 640/729 (87.79%), Postives = 682/729 (93.55%), Query Frame = 0
Query: 1 MEALSAPLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSA 60
MEALS PL+SL N S +NNL FRNHQILS ID+CSS KQLK+VHA+MLRTGLFFDPFSA
Sbjct: 1 MEALSVPLISLQNFSTLNNNLPFRNHQILSAIDKCSSSKQLKEVHARMLRTGLFFDPFSA 60
Query: 61 SKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDEC 120
SKL ASAL S STL+YAR+VFDQIP PNLYTWN LIRAYASS+DPFQSFVIFL LLD+C
Sbjct: 61 SKLFTASALSSFSTLDYARNVFDQIPQPNLYTWNILIRAYASSSDPFQSFVIFLDLLDKC 120
Query: 121 DDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMA 180
+DLPNNFTFPFVIKAASELKASRVG AVHGMAIKLS GMD YILNSLVRFYGACGDL+MA
Sbjct: 121 EDLPNNFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMA 180
Query: 181 ERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKK 240
ERLF+GISCKDVVSWNSMISAFAQGNCPEDALELFLKME NVMPNSVTMV VLSACAKK
Sbjct: 181 ERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVCVLSACAKK 240
Query: 241 LDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTML 300
LDLEFGRWVCSYIERK I +DLTL NAMLDMYTKCGS+ DA+KLFDEMPERDVFSWT ML
Sbjct: 241 LDLEFGRWVCSYIERKGIKMDLTLRNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIML 300
Query: 301 DGYAKMGDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDE 360
DGYAKMGD++AAR VF+ MPVKEIAAWN ISAYE+NGKPKEALA FNELQLSKIAKPDE
Sbjct: 301 DGYAKMGDYDAARGVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDE 360
Query: 361 VTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYA 420
VTLVS+LSACAQLGAIDLGGWIHVYIKREGI+LN HLI+SL+DMYAKCGALEK+LEVFY+
Sbjct: 361 VTLVSTLSACAQLGAIDLGGWIHVYIKREGIDLNCHLISSLVDMYAKCGALEKALEVFYS 420
Query: 421 VEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEG 480
VEE+DVYVWSAMIAGLGMHGRGKAAI+LFF+MQEAKVKPN VTFTN+LCACSH GLVDEG
Sbjct: 421 VEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHTGLVDEG 480
Query: 481 RALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACS 540
R FHEMEPVYGVVP TKHYACMVDILGRAGFLEEAMELINEM TPSASVWGALLGACS
Sbjct: 481 RVFFHEMEPVYGVVPETKHYACMVDILGRAGFLEEAMELINEMSITPSASVWGALLGACS 540
Query: 541 LHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGC 600
LHMNVEL ELASDQLLKLEPRNHGAI+LLSN+YAKTGRW+KVSELRKLMRD+ELKKEPGC
Sbjct: 541 LHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGC 600
Query: 601 SSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEH 660
SS+EVNG VHEFLVGDN HPLS +IYSKLD+IA KLK VGYEPNKSHLLQLIEEDD+KE
Sbjct: 601 SSIEVNGNVHEFLVGDNLHPLSSNIYSKLDDIATKLKPVGYEPNKSHLLQLIEEDDLKEQ 660
Query: 661 ALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFH 720
ALSLHSEKLAIAFGL+SLAPSQPIRVVKNLRICGDCHE AKL+SRVY+RDIL++DRYRFH
Sbjct: 661 ALSLHSEKLAIAFGLVSLAPSQPIRVVKNLRICGDCHEFAKLVSRVYDRDILLRDRYRFH 720
Query: 721 HFRDGHCSC 729
HFRDGHCSC
Sbjct: 721 HFRDGHCSC 729
BLAST of Csor.00g016890 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 920.6 bits (2378), Expect = 8.0e-268
Identity = 439/726 (60.47%), Postives = 561/726 (77.27%), Query Frame = 0
Query: 7 PLVSLPNRSIADNNLHFRNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSASKLIAA 66
P S PN+ +N + +S I++C S +QLKQ H M+RTG F DP+SASKL A
Sbjct: 16 PNFSNPNQPTTNN----ERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAM 75
Query: 67 SALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDECDDLPNN 126
+AL S ++LEYAR VFD+IP PN + WNTLIRAYAS DP S FL ++ E PN
Sbjct: 76 AALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNK 135
Query: 127 FTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMAERLFEG 186
+TFPF+IKAA+E+ + +G+++HGMA+K ++G D ++ NSL+ Y +CGDL+ A ++F
Sbjct: 136 YTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTT 195
Query: 187 ISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKKLDLEFG 246
I KDVVSWNSMI+ F Q P+ ALELF KME +V + VTMVGVLSACAK +LEFG
Sbjct: 196 IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 255
Query: 247 RWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTMLDGYAKM 306
R VCSYIE ++V+LTL NAMLDMYTKCGSI DA++LFD M E+D +WTTMLDGYA
Sbjct: 256 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 315
Query: 307 GDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDEVTLVSS 366
D+ AAR+V + MP K+I AWNA ISAYE+NGKP EAL F+ELQL K K +++TLVS+
Sbjct: 316 EDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVST 375
Query: 367 LSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYAVEEKDV 426
LSACAQ+GA++LG WIH YIK+ GI +N H+ ++LI MY+KCG LEKS EVF +VE++DV
Sbjct: 376 LSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV 435
Query: 427 YVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEGRALFHE 486
+VWSAMI GL MHG G A+++F+KMQEA VKPN VTFTN+ CACSH GLVDE +LFH+
Sbjct: 436 FVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQ 495
Query: 487 MEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACSLHMNVE 546
ME YG+VP KHYAC+VD+LGR+G+LE+A++ I MP PS SVWGALLGAC +H N+
Sbjct: 496 MESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLN 555
Query: 547 LAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGCSSVEVN 606
LAE+A +LL+LEPRN GA +LLSN+YAK G+W+ VSELRK MR + LKKEPGCSS+E++
Sbjct: 556 LAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEID 615
Query: 607 GIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEHALSLHS 666
G++HEFL GDN+HP+S +Y KL E+ KLKS GYEP S +LQ+IEE+++KE +L+LHS
Sbjct: 616 GMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHS 675
Query: 667 EKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFHHFRDGH 726
EKLAI +GLIS + IRV+KNLR+CGDCH VAKLIS++Y+R+I+V+DRYRFHHFR+G
Sbjct: 676 EKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQ 735
Query: 727 CSCPHF 733
CSC F
Sbjct: 736 CSCNDF 737
BLAST of Csor.00g016890 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 602.4 bits (1552), Expect = 4.8e-172
Identity = 310/740 (41.89%), Postives = 448/740 (60.54%), Query Frame = 0
Query: 24 RNHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSASKLIAASALKSS-STLEYARDVF 83
RNH LS + C + + L+ +HAQM++ GL ++ SKLI L L YA VF
Sbjct: 32 RNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVF 91
Query: 84 DQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDECDDLPNNFTFPFVIKAASELKAS 143
I PNL WNT+ R +A S+DP + +++ ++ LPN++TFPFV+K+ ++ KA
Sbjct: 92 KTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMI-SLGLLPNSYTFPFVLKSCAKSKAF 151
Query: 144 RVGRAVHGMAIKLSLGMDQYILNS-------------------------------LVRFY 203
+ G+ +HG +KL +D Y+ S L++ Y
Sbjct: 152 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 211
Query: 204 GACGDLNMAERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMV 263
+ G + A++LF+ I KDVVSWN+MIS +A+ ++ALELF M NV P+ TMV
Sbjct: 212 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 271
Query: 264 GVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPER 323
V+SACA+ +E GR V +I+ +L + NA++D+Y+KCG + A LF+ +P +
Sbjct: 272 TVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK 331
Query: 324 DVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAWNAFISAYERNGKPKEALATFNELQ 383
DV SW T++ GY M + KEAL F E+
Sbjct: 332 DVISWNTLIGGYTHMNLY-------------------------------KEALLLFQEM- 391
Query: 384 LSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIKR--EGINLNGHLITSLIDMYAKCG 443
L P++VT++S L ACA LGAID+G WIHVYI + +G+ L TSLIDMYAKCG
Sbjct: 392 LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 451
Query: 444 ALEKSLEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLC 503
+E + +VF ++ K + W+AMI G MHGR A+ +LF +M++ ++P+D+TF LL
Sbjct: 452 DIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 511
Query: 504 ACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSA 563
ACSH+G++D GR +F M Y + P +HY CM+D+LG +G +EA E+IN M P
Sbjct: 512 ACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDG 571
Query: 564 SVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLM 623
+W +LL AC +H NVEL E ++ L+K+EP N G+ +LLSN+YA GRW++V++ R L+
Sbjct: 572 VIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALL 631
Query: 624 RDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLL 683
D +KK PGCSS+E++ +VHEF++GD HP +R+IY L+E+ L+ G+ P+ S +L
Sbjct: 632 NDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVL 691
Query: 684 QLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNR 730
Q +EE + KE AL HSEKLAIAFGLIS P + +VKNLR+C +CHE KLIS++Y R
Sbjct: 692 QEMEE-EWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKR 737
BLAST of Csor.00g016890 vs. TAIR 10
Match:
AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 541.6 bits (1394), Expect = 1.0e-153
Identity = 269/709 (37.94%), Postives = 429/709 (60.51%), Query Frame = 0
Query: 28 ILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPH 87
IL + C S +KQ+HA +LRT + S L S SS L YA +VF IP
Sbjct: 15 ILEKLSFCKSLNHIKQLHAHILRT--VINHKLNSFLFNLSVSSSSINLSYALNVFSSIPS 74
Query: 88 -PNLYTWNTLIRAYASSADPFQSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGR 147
P +N +R + S++P ++ ++F + + F+F ++KA S++ A G
Sbjct: 75 PPESIVFNPFLRDLSRSSEP-RATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGM 134
Query: 148 AVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMAERLFEGISCKDVVSWNSMISAFAQGN 207
+HG+A K++ D ++ + Y +CG +N A +F+ +S +DVV+WN+MI + +
Sbjct: 135 ELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 194
Query: 208 CPEDALELFLKMEGANVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCN 267
++A +LF +M+ +NVMP+ + + ++SAC + ++ + R + ++ ++ +D L
Sbjct: 195 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 254
Query: 268 AMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAA 327
A++ MY G + A + F +M R++F T M+ GY+K G + A+ +FD+ K++
Sbjct: 255 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 314
Query: 328 WNAFISAYERNGKPKEALATFNELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYI 387
W ISAY + P+EAL F E+ S I KPD V++ S +SACA LG +D W+H I
Sbjct: 315 WTTMISAYVESDYPQEALRVFEEMCCSGI-KPDVVSMFSVISACANLGILDKAKWVHSCI 374
Query: 388 KREGINLNGHLITSLIDMYAKCGALEKSLEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAI 447
G+ + +LI+MYAKCG L+ + +VF + ++V WS+MI L MHG A+
Sbjct: 375 HVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDAL 434
Query: 448 ELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDI 507
LF +M++ V+PN+VTF +L CSH+GLV+EG+ +F M Y + P +HY CMVD+
Sbjct: 435 SLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDL 494
Query: 508 LGRAGFLEEAMELINEMPTTPSASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAI 567
GRA L EA+E+I MP + +WG+L+ AC +H +EL + A+ ++L+LEP + GA+
Sbjct: 495 FGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGAL 554
Query: 568 ILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIY 627
+L+SN+YA+ RW+ V +R++M + + KE G S ++ NG HEFL+GD H S +IY
Sbjct: 555 VLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIY 614
Query: 628 SKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQP--- 687
+KLDE+ +KLK GY P+ +L +EE++ K+ L HSEKLA+ FGL++ +
Sbjct: 615 AKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVL-WHSEKLALCFGLMNEEKEEEKDS 674
Query: 688 ---IRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFHHFRDGHCSC 730
IR+VKNLR+C DCH KL+S+VY R+I+V+DR RFH +++G CSC
Sbjct: 675 CGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSC 718
BLAST of Csor.00g016890 vs. TAIR 10
Match:
AT3G12770.1 (mitochondrial editing factor 22 )
HSP 1 Score: 526.2 bits (1354), Expect = 4.4e-149
Identity = 275/702 (39.17%), Postives = 418/702 (59.54%), Query Frame = 0
Query: 30 STIDQCSSGKQLKQVHAQMLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPHPN 89
S ID + QLKQ+HA++L GL F F +KLI AS+ S + +AR VFD +P P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASS--SFGDITFARQVFDDLPRPQ 85
Query: 90 LYTWNTLIRAYASSADPFQSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVH 149
++ WN +IR Y S + FQ ++ + + P++FTFP ++KA S L ++GR VH
Sbjct: 86 IFPWNAIIRGY-SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 145
Query: 150 GMAIKLSLGMDQYILNSLVRFYGACGDLNMAERLFEGISC--KDVVSWNSMISAFAQGNC 209
+L D ++ N L+ Y C L A +FEG+ + +VSW +++SA+AQ
Sbjct: 146 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 205
Query: 210 PEDALELFLKMEGANVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNA 269
P +ALE+F +M +V P+ V +V VL+A DL+ GR + + + + + ++ L +
Sbjct: 206 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 265
Query: 270 MLDMYTKCGSIGDAEKLFDEMPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAW 329
+ MY KCG + A+ LFD+M ++ W M+ GYAK
Sbjct: 266 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK---------------------- 325
Query: 330 NAFISAYERNGKPKEALATFNELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIK 389
NG +EA+ F+E+ ++K +PD +++ S++SACAQ+G+++ ++ Y+
Sbjct: 326 ---------NGYAREAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVG 385
Query: 390 REGINLNGHLITSLIDMYAKCGALEKSLEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIE 449
R + + ++LIDM+AKCG++E + VF ++DV VWSAMI G G+HGR + AI
Sbjct: 386 RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAIS 445
Query: 450 LFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDIL 509
L+ M+ V PNDVTF LL AC+H+G+V EG F+ M + + P +HYAC++D+L
Sbjct: 446 LYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLL 505
Query: 510 GRAGFLEEAMELINEMPTTPSASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAII 569
GRAG L++A E+I MP P +VWGALL AC H +VEL E A+ QL ++P N G +
Sbjct: 506 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYV 565
Query: 570 LLSNVYAKTGRWDKVSELRKLMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYS 629
LSN+YA WD+V+E+R M++ L K+ GCS VEV G + F VGD SHP +I
Sbjct: 566 QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIER 625
Query: 630 KLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVV 689
+++ I ++LK G+ NK L + +++ +E L HSE++AIA+GLIS P+R+
Sbjct: 626 QVEWIESRLKEGGFVANKDASLHDLNDEEAEE-TLCSHSERIAIAYGLISTPQGTPLRIT 685
Query: 690 KNLRICGDCHEVAKLISRVYNRDILVQDRYRFHHFRDGHCSC 730
KNLR C +CH KLIS++ +R+I+V+D RFHHF+DG CSC
Sbjct: 686 KNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSC 690
BLAST of Csor.00g016890 vs. TAIR 10
Match:
AT2G22410.1 (SLOW GROWTH 1 )
HSP 1 Score: 525.4 bits (1352), Expect = 7.5e-149
Identity = 243/616 (39.45%), Postives = 395/616 (64.12%), Query Frame = 0
Query: 25 NHQILSTIDQCSSGKQLKQVHAQMLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQ 84
++ +LS +++C LKQ+ AQM+ GL DPF++S+LIA AL S L+Y+ +
Sbjct: 53 HNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKG 112
Query: 85 IPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDE--CDDLPNNFTFPFVIKAASELKAS 144
I +PN+++WN IR ++ S +P +SF+++ +L C+ P++FT+P + K ++L+ S
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172
Query: 145 RVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMAERLFEGISCKDVVSWNSMISAF 204
+G + G +KL L + ++ N+ + + +CGD+ A ++F+ +D+VSWN +I+ +
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232
Query: 205 AQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDL 264
+ E A+ ++ ME V P+ VTM+G++S+C+ DL G+ Y++ + + +
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 292
Query: 265 TLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVK 324
L NA++DM++KCG I +A ++FD + +R + SWTTM+ GYA+ G + +RK+FD+M K
Sbjct: 293 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 325 EIAAWNAFISAYERNGKPKEALATFNELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWI 384
++ WNA I + + ++ALA F E+Q S KPDE+T++ LSAC+QLGA+D+G WI
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSN-TKPDEITMIHCLSACSQLGALDVGIWI 412
Query: 385 HVYIKREGINLNGHLITSLIDMYAKCGALEKSLEVFYAVEEKDVYVWSAMIAGLGMHGRG 444
H YI++ ++LN L TSL+DMYAKCG + ++L VF+ ++ ++ ++A+I GL +HG
Sbjct: 413 HRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDA 472
Query: 445 KAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYAC 504
AI F +M +A + P+++TF LL AC H G++ GR F +M+ + + P KHY+
Sbjct: 473 STAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSI 532
Query: 505 MVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACSLHMNVELAELASDQLLKLEPRN 564
MVD+LGRAG LEEA L+ MP A+VWGALL C +H NVEL E A+ +LL+L+P +
Sbjct: 533 MVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSD 592
Query: 565 HGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLS 624
G +LL +Y + W+ R++M + ++K PGCSS+EVNGIV EF+V D S P S
Sbjct: 593 SGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPES 652
Query: 625 RDIYSKLDEIAAKLKS 639
IY +L + ++S
Sbjct: 653 EKIYDRLHCLGRHMRS 667
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O82380 | 1.1e-266 | 60.47 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9LN01 | 6.8e-171 | 41.89 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
O23337 | 1.4e-152 | 37.94 | Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... | [more] |
Q9LTV8 | 6.2e-148 | 39.17 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... | [more] |
Q9SJZ3 | 1.1e-147 | 39.45 | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
KAG6583370.1 | 0.0 | 100.00 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
KAG7019141.1 | 0.0 | 99.86 | T-complex protein 1 subunit beta, partial [Cucurbita argyrosperma subsp. argyros... | [more] |
XP_022964665.1 | 0.0 | 99.59 | pentatricopeptide repeat-containing protein At2g29760, chloroplastic [Cucurbita ... | [more] |
XP_023519184.1 | 0.0 | 98.49 | pentatricopeptide repeat-containing protein At2g29760, chloroplastic [Cucurbita ... | [more] |
XP_022970496.1 | 0.0 | 97.53 | pentatricopeptide repeat-containing protein At2g29760, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HLG4 | 0.0 | 99.59 | pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Cucurbit... | [more] |
A0A6J1I0R3 | 0.0 | 97.53 | pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Cucurbit... | [more] |
A0A0A0M0R9 | 0.0 | 87.79 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G5301... | [more] |
A0A5A7SKX2 | 0.0 | 87.93 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5D3BBW6 | 0.0 | 87.79 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |