Csor.00g016650 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g016650
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Phosphopyruvate hydratase
Location	Csor_Chr13: 535980 .. 536907 (+)
RNA-Seq Expression	Csor.00g016650
Synteny	Csor.00g016650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATACAAAGCACAAGCTCTTCTGCAAAATCGCGGATGCGATGGATGCTGCTGCTAGGGCCAAAATTTCCGATCTTCTTCATCGCAATCCCTCATATATTTGTTTGGCTGGAAAGAAAATGCCGGTATAACATCTAGTTACTTACTTCGTCTTGACGTCGAATTCATGATTGCGGTTTCCAAATGCTTCGCGATGTGACTAGGGATCTTGGAGCCATGATTTCAATTACTTTTAGTTGATCAATTGTAATTGTTTGAAATTTGTTATATCTTTTCCATCTAATCGCTTATCTGTTTCTGTTGTTCTTTAATCAAGCAGTTGAATCATGCAAGGAAATTCGTTCCTTCAGTCATCATGAAGTTTGAAGCCCGATATGTTCTTGATGGTCGAGGAAGTTCGACTGCTGAAGCGGACTTGTATTATTCGTCTGCATCAATTCCACAGGCATGTAAGGTTCCCTGGAAATTAAAATTAATTTGTCTGCTAAGAAACATAATTATCGTTAAAGCATGGCATCAAATTGTTTTGGAATTGAATTAACCTAATTTTATCGTGAAATTTGAAGTCTAGGCTACCCCTAAGGTTCTCTTAACTAAGTTTTTGTTTATGCTGTTTTTAGTAATCTGAATTCATTAGGATAATCAACTCTGAGTTGAACATTATACATACCATTGGTTCTTAGTAGAAGAACAATGGTAAAATTACCCTGAATCGGACTCGTCCGATGATTATTGATTAAACACATAAGATTGGAGCGTCGATTCTCTTCTCAATATGAAAGGACAACTCTCAATGTATACTGATTTGAGTCAGAAACTCGTTGCCATCTATCCGGCTCTCCGCTCTTGAAATTTTGCTCAACGATAATGGTATTTTGTCTTGGACAGTTTTGGTTGGAATATGATCATGCCTGGAGACATTCATGA

mRNA sequence

ATGAATACAAAGCACAAGCTCTTCTGCAAAATCGCGGATGCGATGGATGCTGCTGCTAGGGCCAAAATTTCCGATCTTCTTCATCGCAATCCCTCATATATTTGTTTGGCTGGAAAGAAAATGCCGTTGAATCATGCAAGGAAATTCGTTCCTTCAGTCATCATGAAGTTTGAAGCCCGATATGTTCTTGATGGTCGAGGAAGTTCGACTGCTGAAGCGGACTTGTATTATTCGTCTGCATCAATTCCACAGGCATGTAAGTTTTGGTTGGAATATGATCATGCCTGGAGACATTCATGA

Coding sequence (CDS)

ATGAATACAAAGCACAAGCTCTTCTGCAAAATCGCGGATGCGATGGATGCTGCTGCTAGGGCCAAAATTTCCGATCTTCTTCATCGCAATCCCTCATATATTTGTTTGGCTGGAAAGAAAATGCCGTTGAATCATGCAAGGAAATTCGTTCCTTCAGTCATCATGAAGTTTGAAGCCCGATATGTTCTTGATGGTCGAGGAAGTTCGACTGCTGAAGCGGACTTGTATTATTCGTCTGCATCAATTCCACAGGCATGTAAGTTTTGGTTGGAATATGATCATGCCTGGAGACATTCATGA

Protein sequence

MNTKHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEARYVLDGRGSSTAEADLYYSSASIPQACKFWLEYDHAWRHS

Homology

[Close]

BLAST of Csor.00g016650 vs. ExPASy Swiss-Prot
Match: Q9ZW34 (Cytosolic enolase 3 OS=Arabidopsis thaliana OX=3702 GN=ENO3 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.9e-06
Identity = 36/84 (42.86%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 4  KHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEARYVL 63
          KH L  KI DA++AA RAK SD        + +A      NH +K V SVI K +AR +L
Sbjct: 9  KHMLSRKIEDAVNAAVRAKTSD------PVLFIA------NHLKKAVSSVITKVKARQIL 68

Query: 64 DGRGSSTAEADLYYSS----ASIP 84
          D RG  T E DL+ +     AS+P
Sbjct: 69 DSRGIPTVEVDLHTNKGVFRASVP 80

[Close]

BLAST of Csor.00g016650 vs. NCBI nr
Match: KAG6583393.1 (Cytosolic enolase 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 207 bits (526), Expect = 2.39e-67
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1  MNTKHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEAR 60
          MNTKHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEAR
Sbjct: 1  MNTKHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEAR 60

Query: 61 YVLDGRGSSTAEADLYYSSASIPQACKFWLEYDHAWRHS 99
          YVLDGRGSSTAEADLYYSSASIPQACKFWLEYDHAWRHS
Sbjct: 61 YVLDGRGSSTAEADLYYSSASIPQACKFWLEYDHAWRHS 99

[Close]

BLAST of Csor.00g016650 vs. NCBI nr
Match: KAG6606193.1 (Cytosolic enolase 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172 bits (436), Expect = 3.43e-53
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MNTKHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEAR 60
          MNTKHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEAR
Sbjct: 1  MNTKHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEAR 60

Query: 61 YVLDGRGSSTAEADLYYSSASIPQA 85
          YVLDGRGSSTAEADLYYSSASIPQA
Sbjct: 61 YVLDGRGSSTAEADLYYSSASIPQA 85

[Close]

BLAST of Csor.00g016650 vs. NCBI nr
Match: XP_022964853.1 (uncharacterized protein LOC111464834 [Cucurbita moschata])

HSP 1 Score: 171 bits (432), Expect = 6.90e-50
Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MNTKHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEAR 60
          MNTKHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNH RKFVPSVIMKFEAR
Sbjct: 1  MNTKHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHVRKFVPSVIMKFEAR 60

Query: 61 YVLDGRGSSTAEADLYYSSASIPQA 85
          YVLDGRGSSTAEADLYYSSASIPQA
Sbjct: 61 YVLDGRGSSTAEADLYYSSASIPQA 85

[Close]

BLAST of Csor.00g016650 vs. NCBI nr
Match: KAG7019160.1 (Cytosolic enolase 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149 bits (375), Expect = 1.10e-43
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MNTKHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEAR 60
          MNTKHKLFCKIADAMDAAARAKISDLL RNPSYICLAGKKMPLNH RKFVPSVIMKFEAR
Sbjct: 1  MNTKHKLFCKIADAMDAAARAKISDLLRRNPSYICLAGKKMPLNHVRKFVPSVIMKFEAR 60

Query: 61 YVLDGRGSSTAEADL 75
          YVLDGRGSSTAEADL
Sbjct: 61 YVLDGRGSSTAEADL 75

[Close]

BLAST of Csor.00g016650 vs. NCBI nr
Match: KAE9461033.1 (hypothetical protein C3L33_07050, partial [Rhododendron williamsianum])

HSP 1 Score: 59.3 bits (142), Expect = 4.42e-09
Identity = 36/73 (49.32%), Postives = 40/73 (54.79%), Query Frame = 0


Query: 4  KHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEARYVL 63
          KH L  KI DA++AA RAK SD                P NH RK VPSVI K +AR +L
Sbjct: 9  KHVLSRKIEDAVNAAVRAKTSD----------------PSNHMRKAVPSVITKVKARQIL 65

Query: 64 DGRGSSTAEADLY 76
          D RG  T E DLY
Sbjct: 69 DSRGIPTVEVDLY 65

[Close]

BLAST of Csor.00g016650 vs. ExPASy TrEMBL
Match: A0A6J1HM49 (uncharacterized protein LOC111464834 OS=Cucurbita moschata OX=3662 GN=LOC111464834 PE=4 SV=1)

HSP 1 Score: 171 bits (432), Expect = 3.34e-50
Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MNTKHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEAR 60
          MNTKHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNH RKFVPSVIMKFEAR
Sbjct: 1  MNTKHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHVRKFVPSVIMKFEAR 60

Query: 61 YVLDGRGSSTAEADLYYSSASIPQA 85
          YVLDGRGSSTAEADLYYSSASIPQA
Sbjct: 61 YVLDGRGSSTAEADLYYSSASIPQA 85

[Close]

BLAST of Csor.00g016650 vs. ExPASy TrEMBL
Match: A0A6A4LP30 (Enolase_N domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_07050 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.14e-09
Identity = 36/73 (49.32%), Postives = 40/73 (54.79%), Query Frame = 0


Query: 4  KHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEARYVL 63
          KH L  KI DA++AA RAK SD                P NH RK VPSVI K +AR +L
Sbjct: 9  KHVLSRKIEDAVNAAVRAKTSD----------------PSNHMRKAVPSVITKVKARQIL 65

Query: 64 DGRGSSTAEADLY 76
          D RG  T E DLY
Sbjct: 69 DSRGIPTVEVDLY 65

[Close]

BLAST of Csor.00g016650 vs. ExPASy TrEMBL
Match: A0A6A1VT63 (Cytosolic enolase 3 OS=Morella rubra OX=262757 GN=CJ030_MR4G023698 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.52e-07
Identity = 35/73 (47.95%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 4  KHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEARYVL 63
          KH L  KI DA++AA RAK +D +     +I         NH RK VPSVI K +AR +L
Sbjct: 9  KHMLSRKIEDAVNAAVRAKSADPV----LFIS--------NHMRKSVPSVITKIKARQIL 68

Query: 64 DGRGSSTAEADLY 76
          D RG  T E DLY
Sbjct: 69 DSRGIPTVEVDLY 69

[Close]

BLAST of Csor.00g016650 vs. ExPASy TrEMBL
Match: W1PQY8 (Phosphopyruvate hydratase OS=Amborella trichopoda OX=13333 GN=AMTR_s00029p00197890 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.81e-07
Identity = 37/73 (50.68%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 4  KHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEARYVL 63
          KHKL  KI DA++AA RAK SD +     +I         NH +K VPSVI K  AR VL
Sbjct: 9  KHKLSRKIEDAVNAAVRAKSSDPV----LFIS--------NHMKKAVPSVITKVTARQVL 68

Query: 64 DGRGSSTAEADLY 76
          D RG  T E DLY
Sbjct: 69 DSRGIPTVEVDLY 69

[Close]

BLAST of Csor.00g016650 vs. ExPASy TrEMBL
Match: A0A4S8INA5 (Phosphopyruvate hydratase OS=Musa balbisiana OX=52838 GN=C4D60_Mb06t15680 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.72e-07
Identity = 39/84 (46.43%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 4  KHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEARYVL 63
          KH L  KI DA++AA RAK SD +     +I         NH RK VP VI K +AR +L
Sbjct: 9  KHLLSRKIEDAVNAAVRAKASDPV----LFIS--------NHMRKAVPPVITKIKARQIL 68

Query: 64 DGRGSSTAEADLY----YSSASIP 83
          D RG  T E DLY     S AS+P
Sbjct: 69 DSRGIPTVEVDLYTNKGMSRASVP 80

[Close]

BLAST of Csor.00g016650 vs. TAIR 10
Match: AT2G29560.1 (cytosolic enolase )

HSP 1 Score: 51.6 bits (122), Expect = 4.2e-07
Identity = 36/84 (42.86%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 4  KHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHARKFVPSVIMKFEARYVL 63
          KH L  KI DA++AA RAK SD        + +A      NH +K V SVI K +AR +L
Sbjct: 9  KHMLSRKIEDAVNAAVRAKTSD------PVLFIA------NHLKKAVSSVITKVKARQIL 68

Query: 64 DGRGSSTAEADLYYSS----ASIP 84
          D RG  T E DL+ +     AS+P
Sbjct: 69 DSRGIPTVEVDLHTNKGVFRASVP 80

The following BLAST results are available for this feature:

BLAST of Csor.00g016650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZW34	5.9e-06	42.86	Cytosolic enolase 3 OS=Arabidopsis thaliana OX=3702 GN=ENO3 PE=1 SV=1	[more]

BLAST of Csor.00g016650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583393.1	2.39e-67	100.00	Cytosolic enolase 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6606193.1	3.43e-53	100.00	Cytosolic enolase 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022964853.1	6.90e-50	98.82	uncharacterized protein LOC111464834 [Cucurbita moschata]	[more]
KAG7019160.1	1.10e-43	97.33	Cytosolic enolase 3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAE9461033.1	4.42e-09	49.32	hypothetical protein C3L33_07050, partial [Rhododendron williamsianum]	[more]

BLAST of Csor.00g016650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HM49	3.34e-50	98.82	uncharacterized protein LOC111464834 OS=Cucurbita moschata OX=3662 GN=LOC1114648...	[more]
A0A6A4LP30	2.14e-09	49.32	Enolase_N domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=...	[more]
A0A6A1VT63	1.52e-07	47.95	Cytosolic enolase 3 OS=Morella rubra OX=262757 GN=CJ030_MR4G023698 PE=4 SV=1	[more]
W1PQY8	6.81e-07	50.68	Phosphopyruvate hydratase OS=Amborella trichopoda OX=13333 GN=AMTR_s00029p001978...	[more]
A0A4S8INA5	8.72e-07	46.43	Phosphopyruvate hydratase OS=Musa balbisiana OX=52838 GN=C4D60_Mb06t15680 PE=3 S...	[more]

BLAST of Csor.00g016650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29560.1	4.2e-07	42.86	cytosolic enolase	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g016650.m01	Csor.00g016650.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005622	intracellular anatomical structure
molecular_function	GO:0008270	zinc ion binding