Csor.00g016220 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g016220
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Transmembrane protein
Location	Csor_Chr13: 766737 .. 769408 (-)
RNA-Seq Expression	Csor.00g016220
Synteny	Csor.00g016220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCTTTCAGGTGGCTGAATATTGGGTTAGCCGTAGTTTTGGGGTTCCTCATAATGGGCATAATTGCAGAGCTTTACTATCTTCTATGCCGGAAGAAGAAAATAATCAATACTACACAGGTTGAAGACGGCGACGGCGACGGCGACCAAACTAAATTCACCAGAAACCCACCTGAGATCCGCCATGGATTGGACCTTGAGCTCGGCGACCAACAAGAAGAAGAAGAAGAAGAAGAGGTGATGGGGATTTACGATCTGGCAGGGCAACCGAGATTTTTGTTCACAATCAAGGAAGAATCAAACGAAGATTTGGAATCAGAAGAATCAAGAACCAGAAGGTTGAGTGACATAATTACAGCAATTGAAACTCCATATTTCACTCCCATGGCGTCTCCGCCATTGAAGGCTTCTCCTCCTCTCAGCTGTTTAGATTCGTATAAACTGCATGGGTTCAATCCCCTGTTTGAATCTTCGCCTCCTCCAAAGTTCAAATTTCTTAGAGATGCAGAGGAGAAACTCTGCAGAAGGCTAATGGAAGAAGCCCAGAGAACCAAAAATAACAATCAATCCTTGTTCCCTTCTCCAATTGATGCGAGACCCCCCAATCCACCCCCTTTCGGGCCAGCGTCTTTGGTGGCACACCGTCTAAGACTCAGTCTTCTCACTGGCACAACACCCAGTATTTGACTCTAGTAACGATGTGGGAACCCCAATCCACCCCTCTTGGGGCCAGCGTCCTTGATGACGCCCCTTTTTACGTCAACCCACCTTCCGGGCTCAGTCTCCTCACTCACACATTGCTCGGTGTCTGGCTCTGATACCGTTTGTAACAGCCCAAGCCCACCACTAGTAGATATCATACTCTTTGGACTATCTCGTTCGGATTTCTATTCAAGGTTATTAAACGCGTCTGCCAGAGAGAAGTTTCTTTGCCTCTTGAATTTTGTTTATTTTATTTTATTTATTTATTTATTTATTATTATTATTATTTAATTAAAAGTAAATTATTTGCAAATATATAGTTCTAAGATTTGGGTGATGATTTAGATTGTTGTTTTTTAATTACTATTTTTAATTATTTTTTTTTTAATGTCATTTAAGTCATAGATTTGTTAATAACCTGACTAAGCTTTTATTAAAGTGTGAAATTTCAAGTTTTAATTGTGTCTTTTATTGACCTAATTAATTTTTATGTTTATTTATTAAAAAGTGATATTCTTGCTTTATAATTTATTTATATTATTTTTTATTTTAATAATTCTATACAACTTTTAATTAAATTATTTTATAATTTCATTTATAATATAATAATTTCATTTTGAGTCCTAATATTTTTATTTTTATTTTTTAAAAATCTCTACTCAATAATGCATTTAGAGTTGAATAATATGAAGTAATTTCCAATAATAATGGCTTGGTTTGGTGTAATTTATTTCAAACAACCTAGCACACGTAAAAAAAATTATTTTTAATTTTTTTTTAAATTAAAATTATTTTTTAAAAAAAACGTTTTATAAACGTGATTTTTTTTTTTTAATAAAGAAAGTGAGAAGTCTACGAAAATATTATTACCAAACAAGTATAATTGAAAATAAATTAAAAAAATTATTTTTTTTAAAAGAAATTGAATATGATTTTGTCATTTATTATTATTATTTTAAATAAACCATTTTAAATTAGTTGTGAAAATTTGAATTGATCGATTACCCAAACGACAAGAAATGTCATTGTTTATATCACGCGATTCGGCCACCGAAAGTTTGTTGCCCTCCAACCATTATTTAATATTTACCCTTTTGATACCCGAACAATTTGAACTACACAATAGATGTACGCTCACCTGAACAATTCGGATTAAACAATCGAGTTACAGGTTGACATGAACAATTCAAAATATACAATCGATTTACTGGTTGACCTGAACAATTCAAAATATACAATCGATTTACTGGTTGACCTGAACAATTTAGATTAAACAATCGATTTATTGGTTGATTCGAACAATTTAGACTAGGTGTCAAACAATTTGGACTACACAATCGAAGAATTTGGACTATACAATCAATTTATATGTTGAAATTTCATTCGTCAGGTCAACTTGATCAACCCAAGAATAGAGTTCACAATTCAACCCGACCTAACCAAAAAATAATTAAAAAAAATCAATAATAGATGACCCAACTCAACCAGAAAATAAGAGGGTTTGGTTGGATAGTAAAACTCATTTGGATAGTTAGGTCGTCAATTCAACCAATCCAAAATTTTGAATTGGTTCAAATGTTTTCCTCGATGTATGCTATGATTTATTTTTTAACAAAAAAAAATTATAATTTAATCATTTAATAGTTCCTTCTATTCAAAAAAAAATTATAATTTTGAATTGGATAGTTTGTTCTATTAGTGAATTGATAAATTGCACAAAATGTAGCGTTAAAATAATTATATTTCTTCTAATACTGATGTAATTGATATACTAAAACCTTTACATTTTAGACTCTGCATTTCTTCGTGTTTTAGCTTTTGAACCTTGTTGTTTGGGTAGACCATTGATGGAAGATTCTCGGTATCAACTCTTTACCTACTTAAAAACAGCTCTTCTTCGAGACAAAGAAACAAAAACAACGGTAACTACTAGTGGTGGGTTTGAGTCGTTACAATATCAAATTTAG

mRNA sequence

ATGGCATCTTTCAGGTGGCTGAATATTGGGTTAGCCGTAGTTTTGGGGTTCCTCATAATGGGCATAATTGCAGAGCTTTACTATCTTCTATGCCGGAAGAAGAAAATAATCAATACTACACAGGTTGAAGACGGCGACGGCGACGGCGACCAAACTAAATTCACCAGAAACCCACCTGAGATCCGCCATGGATTGGACCTTGAGCTCGGCGACCAACAAGAAGAAGAAGAAGAAGAAGAGGTGATGGGGATTTACGATCTGGCAGGGCAACCGAGATTTTTGTTCACAATCAAGGAAGAATCAAACGAAGATTTGGAATCAGAAGAATCAAGAACCAGAAGGTTGAGTGACATAATTACAGCAATTGAAACTCCATATTTCACTCCCATGGCGTCTCCGCCATTGAAGGCTTCTCCTCCTCTCAGCTGTTTAGATTCGTATAAACTGCATGGGTTCAATCCCCTACCATTGATGGAAGATTCTCGGTATCAACTCTTTACCTACTTAAAAACAGCTCTTCTTCGAGACAAAGAAACAAAAACAACGGTAACTACTAGTGGTGGGTTTGAGTCGTTACAATATCAAATTTAG

Coding sequence (CDS)

ATGGCATCTTTCAGGTGGCTGAATATTGGGTTAGCCGTAGTTTTGGGGTTCCTCATAATGGGCATAATTGCAGAGCTTTACTATCTTCTATGCCGGAAGAAGAAAATAATCAATACTACACAGGTTGAAGACGGCGACGGCGACGGCGACCAAACTAAATTCACCAGAAACCCACCTGAGATCCGCCATGGATTGGACCTTGAGCTCGGCGACCAACAAGAAGAAGAAGAAGAAGAAGAGGTGATGGGGATTTACGATCTGGCAGGGCAACCGAGATTTTTGTTCACAATCAAGGAAGAATCAAACGAAGATTTGGAATCAGAAGAATCAAGAACCAGAAGGTTGAGTGACATAATTACAGCAATTGAAACTCCATATTTCACTCCCATGGCGTCTCCGCCATTGAAGGCTTCTCCTCCTCTCAGCTGTTTAGATTCGTATAAACTGCATGGGTTCAATCCCCTACCATTGATGGAAGATTCTCGGTATCAACTCTTTACCTACTTAAAAACAGCTCTTCTTCGAGACAAAGAAACAAAAACAACGGTAACTACTAGTGGTGGGTTTGAGTCGTTACAATATCAAATTTAG

Protein sequence

MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPEIRHGLDLELGDQQEEEEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEESRTRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPLPLMEDSRYQLFTYLKTALLRDKETKTTVTTSGGFESLQYQI

Homology

[Close]

BLAST of Csor.00g016220 vs. NCBI nr
Match: KAG6583436.1 (hypothetical protein SDJN03_19368, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 384 bits (986), Expect = 2.42e-134
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPE 60
           MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPE
Sbjct: 1   MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPE 60

Query: 61  IRHGLDLELGDQQEEEEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEESRTRRLSDIIT 120
           IRHGLDLELGDQQEEEEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEESRTRRLSDIIT
Sbjct: 61  IRHGLDLELGDQQEEEEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEESRTRRLSDIIT 120

Query: 121 AIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPLPLMEDSRYQLFTYLKTALLRDKETK 180
           AIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPLPLMEDSRYQLFTYLKTALLRDKETK
Sbjct: 121 AIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPLPLMEDSRYQLFTYLKTALLRDKETK 180

Query: 181 TTVTTSGGFESLQYQI 196
           TTVTTSGGFESLQYQI
Sbjct: 181 TTVTTSGGFESLQYQI 196

[Close]

BLAST of Csor.00g016220 vs. NCBI nr
Match: KAG7019199.1 (hypothetical protein SDJN02_18157, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 298 bits (763), Expect = 8.59e-101
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPE 60
           MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPE
Sbjct: 1   MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPE 60

Query: 61  IRHGLDLELGDQQEEEEEEEVMGIYDLAGQPRFLFTIKEESNEDLESEESRTRRLSDIIT 120
           IRHGLDLELGD+QEEEEEE VMGIYDLAGQPRFLFTIKEESNEDLESEESRTRRLSDIIT
Sbjct: 61  IRHGLDLELGDEQEEEEEE-VMGIYDLAGQPRFLFTIKEESNEDLESEESRTRRLSDIIT 120

Query: 121 AIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPL 155
           AIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPL
Sbjct: 121 AIETPYFTPMASPPLKASPPLSCLDSYKLHGFNPL 154

[Close]

BLAST of Csor.00g016220 vs. NCBI nr
Match: XP_023520140.1 (uncharacterized protein LOC111783445 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274 bits (701), Expect = 6.90e-91
Identity = 152/182 (83.52%), Postives = 157/182 (86.26%), Query Frame = 0


Query: 1   MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGD--QTKFTRNP 60
           MASF  LNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGD    KFTRNP
Sbjct: 1   MASFSCLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDGDHAKFTRNP 60

Query: 61  PEIRHGLDLELGDQQEEEEEE---EVMGIYDLAGQPRFLFTIKEESNEDLESEESRTRRL 120
           PEIRHGLD+ELGD+QEEEEEE   EVMGIY+LAGQPRFLFTIKEESNEDLESEESRTRRL
Sbjct: 61  PEIRHGLDVELGDEQEEEEEEHEEEVMGIYNLAGQPRFLFTIKEESNEDLESEESRTRRL 120

Query: 121 SDIITAIETPYFTPMASPPLKASPP-----LSCLDSYKLHGFNPLPLMEDSRYQLFTYLK 172
           SDIITAIETPYFTPMASPPLKASPP     L CLDSYKLHGFNP  L E S    F +L+
Sbjct: 121 SDIITAIETPYFTPMASPPLKASPPPPPPPLGCLDSYKLHGFNP--LFESSPPPKFKFLR 180

[Close]

BLAST of Csor.00g016220 vs. NCBI nr
Match: XP_022970569.1 (uncharacterized protein LOC111469506 [Cucurbita maxima])

HSP 1 Score: 253 bits (647), Expect = 9.93e-83
Identity = 144/178 (80.90%), Postives = 149/178 (83.71%), Query Frame = 0


Query: 1   MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPE 60
           MASF  LNIGLAVVLGFL MGIIAELYYLLCRKKKIINTTQVED     DQTK T NPPE
Sbjct: 1   MASFSCLNIGLAVVLGFLFMGIIAELYYLLCRKKKIINTTQVED-----DQTKSTINPPE 60

Query: 61  IRHGLDLELGDQQEEEEE--EEVMGIYDLAGQPRFLFTIKEESNEDLESEESRTRRLSDI 120
           IRHGL+LEL D+QEE EE  EEVMGIY+LAGQPRFLFTI EESNEDLESEESRTRRLSDI
Sbjct: 61  IRHGLELELADEQEEHEEHEEEVMGIYNLAGQPRFLFTINEESNEDLESEESRTRRLSDI 120

Query: 121 ITAIETPYFTPMASPPLKASP----PLSCLDSYKLHGFNPLPLMEDSRYQLFTYLKTA 172
           ITAIETPYFTPMASPPLKASP    PLSCLDSYKLHGFNP  L E S    F +L+ A
Sbjct: 121 ITAIETPYFTPMASPPLKASPSPPPPLSCLDSYKLHGFNP--LFESSPPPKFKFLRDA 171

[Close]

BLAST of Csor.00g016220 vs. NCBI nr
Match: XP_038893882.1 (uncharacterized protein LOC120082683 [Benincasa hispida])

HSP 1 Score: 173 bits (439), Expect = 2.55e-50
Identity = 115/216 (53.24%), Postives = 135/216 (62.50%), Query Frame = 0


Query: 1   MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTT-QVEDGDGDGDQTKF----- 60
           MAS  WL IGL ++LGFL +GI+AELYYLL RKKK IN   +VED       +       
Sbjct: 1   MASSSWLYIGLGIILGFLFLGILAELYYLLWRKKKRINNNPEVEDNHFTKQPSLHLIPSE 60

Query: 61  TRNPPEIRHGLDLELG----------------DQQEEEEEEEVMGIYDLAGQPRFLFTIK 120
           TRNPPE R G DLELG                D++E E++ E+ GIY+LAGQPRFLFTI 
Sbjct: 61  TRNPPENRRGFDLELGSGEDSLLKTTATEEEDDEEETEDDLELQGIYNLAGQPRFLFTIN 120

Query: 121 EESNEDLESEE------SRTRRLSDIITAIETPYFTPMASPPLKASPPLSCLDSY--KLH 180
           EE+ EDLESE+      SR R LSDII AI+TP+FTPMASPPLKASP LS L+SY  KLH
Sbjct: 121 EETKEDLESEDGKSRKGSRNRSLSDIIAAIDTPFFTPMASPPLKASP-LSSLESYNYKLH 180

[Close]

BLAST of Csor.00g016220 vs. ExPASy TrEMBL
Match: A0A6J1I5Z4 (uncharacterized protein LOC111469506 OS=Cucurbita maxima OX=3661 GN=LOC111469506 PE=4 SV=1)

HSP 1 Score: 253 bits (647), Expect = 4.81e-83
Identity = 144/178 (80.90%), Postives = 149/178 (83.71%), Query Frame = 0


Query: 1   MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKFTRNPPE 60
           MASF  LNIGLAVVLGFL MGIIAELYYLLCRKKKIINTTQVED     DQTK T NPPE
Sbjct: 1   MASFSCLNIGLAVVLGFLFMGIIAELYYLLCRKKKIINTTQVED-----DQTKSTINPPE 60

Query: 61  IRHGLDLELGDQQEEEEE--EEVMGIYDLAGQPRFLFTIKEESNEDLESEESRTRRLSDI 120
           IRHGL+LEL D+QEE EE  EEVMGIY+LAGQPRFLFTI EESNEDLESEESRTRRLSDI
Sbjct: 61  IRHGLELELADEQEEHEEHEEEVMGIYNLAGQPRFLFTINEESNEDLESEESRTRRLSDI 120

Query: 121 ITAIETPYFTPMASPPLKASP----PLSCLDSYKLHGFNPLPLMEDSRYQLFTYLKTA 172
           ITAIETPYFTPMASPPLKASP    PLSCLDSYKLHGFNP  L E S    F +L+ A
Sbjct: 121 ITAIETPYFTPMASPPLKASPSPPPPLSCLDSYKLHGFNP--LFESSPPPKFKFLRDA 171

[Close]

BLAST of Csor.00g016220 vs. ExPASy TrEMBL
Match: A0A6J1G9H1 (uncharacterized protein LOC111452187 OS=Cucurbita moschata OX=3662 GN=LOC111452187 PE=4 SV=1)

HSP 1 Score: 172 bits (436), Expect = 5.81e-50
Identity = 110/193 (56.99%), Postives = 125/193 (64.77%), Query Frame = 0


Query: 1   MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDG-----------DGDG 60
           MASF WL IGL + LGFL +GI+AELYYLL R  K INTT V+               + 
Sbjct: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPLPLIPSET 60

Query: 61  DQTK-FTRNPPEIRHGLDLELG-------------DQQEEEEEEEV--MGIYDLAGQPRF 120
           + T+  TRNP E RHGLDLE G             D+ +E EEE+V  M IY+LAGQPRF
Sbjct: 61  NSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRF 120

Query: 121 LFTIKEESNEDLESEE-----------SRTRRLSDIITAIETPYFTPMASPPLKASPPLS 155
           LFTIKEE+ EDLESE+           SR R LSDIITAIETP+FTP+ASPPLKASP L 
Sbjct: 121 LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASP-LC 180

[Close]

BLAST of Csor.00g016220 vs. ExPASy TrEMBL
Match: A0A5D3DEB1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold710G00080 PE=4 SV=1)

HSP 1 Score: 170 bits (431), Expect = 3.28e-49
Identity = 114/220 (51.82%), Postives = 134/220 (60.91%), Query Frame = 0


Query: 1   MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKF------ 60
           MAS  WL IGL +VLGFL +GI+ ELYYLLCRK K IN T   + D     TK       
Sbjct: 1   MASSSWLYIGLGIVLGFLFLGILTELYYLLCRKNKRINDTSEVEEDNHHHFTKQPSRRLI 60

Query: 61  ---TRNPPEIRHGLDLELGD-----------QQEEEEEE-----EVMGIYDLAGQPRFLF 120
              T+NPPE R G D ELG            ++E+E+EE     E+ GIY+LAGQPRFLF
Sbjct: 61  PTETQNPPENRRGFDAELGSGEVSLLKTTGREEEDEDEETEDDLELQGIYNLAGQPRFLF 120

Query: 121 TIKEESNEDLESEE------SRTRRLSDIITAIETPYFTPMASPPLKASPPLSC-LDSY- 180
           TI EE+ EDLESE+      SR R LSDII AIETP+FTPMASPPLKAS PLS  L+SY 
Sbjct: 121 TINEETKEDLESEDGKSRKGSRNRSLSDIIAAIETPFFTPMASPPLKASSPLSLNLESYN 180

[Close]

BLAST of Csor.00g016220 vs. ExPASy TrEMBL
Match: A0A1S3C577 (uncharacterized protein LOC103497168 OS=Cucumis melo OX=3656 GN=LOC103497168 PE=4 SV=1)

HSP 1 Score: 170 bits (431), Expect = 3.28e-49
Identity = 114/220 (51.82%), Postives = 134/220 (60.91%), Query Frame = 0


Query: 1   MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGDGDQTKF------ 60
           MAS  WL IGL +VLGFL +GI+ ELYYLLCRK K IN T   + D     TK       
Sbjct: 1   MASSSWLYIGLGIVLGFLFLGILTELYYLLCRKNKRINDTSEVEEDNHHHFTKQPSRRLI 60

Query: 61  ---TRNPPEIRHGLDLELGD-----------QQEEEEEE-----EVMGIYDLAGQPRFLF 120
              T+NPPE R G D ELG            ++E+E+EE     E+ GIY+LAGQPRFLF
Sbjct: 61  PTETQNPPENRRGFDAELGSGEVSLLKTTGREEEDEDEETEDDLELQGIYNLAGQPRFLF 120

Query: 121 TIKEESNEDLESEE------SRTRRLSDIITAIETPYFTPMASPPLKASPPLSC-LDSY- 180
           TI EE+ EDLESE+      SR R LSDII AIETP+FTPMASPPLKAS PLS  L+SY 
Sbjct: 121 TINEETKEDLESEDGKSRKGSRNRSLSDIIAAIETPFFTPMASPPLKASSPLSLNLESYN 180

[Close]

BLAST of Csor.00g016220 vs. ExPASy TrEMBL
Match: A0A6J1KBC0 (uncharacterized protein LOC111492746 OS=Cucurbita maxima OX=3661 GN=LOC111492746 PE=4 SV=1)

HSP 1 Score: 169 bits (428), Expect = 9.28e-49
Identity = 105/193 (54.40%), Postives = 124/193 (64.25%), Query Frame = 0


Query: 1   MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDG-----------DGDG 60
           M SF WL IGL + LGFL +GI+AELYYLL R  + INTT++E               + 
Sbjct: 1   MPSFPWLYIGLGLALGFLFLGIVAELYYLLWRNNRRINTTELEQDAYNKARPFPFIPSET 60

Query: 61  DQTK-FTRNPPEIRHGLDLELGDQQE---------------EEEEEEVMGIYDLAGQPRF 120
           + T+  TRNP E RHGLDLE G  ++               E+E+ E+M IY+LAGQPRF
Sbjct: 61  NSTREITRNPLENRHGLDLEFGSGEDLLLKTTAEDYEHDEAEDEDVELMAIYNLAGQPRF 120

Query: 121 LFTIKEESNEDLESEE-----------SRTRRLSDIITAIETPYFTPMASPPLKASPPLS 155
           LFTIKEE+ EDLESE+           SR R LSDIITAIETP+FTP+ASPPLKASP L 
Sbjct: 121 LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASP-LC 180

[Close]

BLAST of Csor.00g016220 vs. TAIR 10
Match: AT5G59350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 79.3 bits (194), Expect = 3.7e-15
Identity = 66/196 (33.67%), Postives = 97/196 (49.49%), Query Frame = 0


Query: 1   MASFRWLNIGLAVVLGFLIMGIIAELYYLL-CR--KKKIINTTQVEDGDGDGDQTKFT-- 60
           M +   L IGL+++ GFL++ ++ E+YYLL C+  KK++I+    E+ + +  Q  +   
Sbjct: 1   MKTISGLGIGLSLMFGFLLLALVGEVYYLLRCKKHKKRVISQESEEEKEEEQQQNGYAKE 60

Query: 61  -------RNPPEIRH---------------GLDLELGDQQEEEE-----EEEVMGIYDLA 120
                  + P  ++                  DLELG  +         E E+M +++  
Sbjct: 61  LIQLFCFKKPQSLQQNNGGREGEVSMNEDGNPDLELGLMKHLNGGDLGFEAELMKLHN-- 120

Query: 121 GQPRFLFTIKEESNEDLESEE---------SRTRRLSDIITAIETPYFTPMASPPLKASP 156
              RFLFTI EE+  DLESE+         SR R LSD+     TP FTP+ASP   +SP
Sbjct: 121 --QRFLFTIMEETKADLESEDGGKSRLGSRSRRRSLSDVPNDCNTPGFTPLASPKKSSSP 180

[Close]

BLAST of Csor.00g016220 vs. TAIR 10
Match: AT2G39560.1 (Putative membrane lipoprotein )

HSP 1 Score: 52.4 bits (124), Expect = 4.9e-07
Identity = 53/170 (31.18%), Postives = 85/170 (50.00%), Query Frame = 0


Query: 1   MASFRWLNIGLAVVLGFLIMGIIAELYYLLCRKKKIINTTQVEDGDGD------------ 60
           M S   + + L++V G L++ ++AELYYLL  KK+  +TT+  D   D            
Sbjct: 1   MRSLSSVGLALSIVFGCLLLALLAELYYLLWCKKR--STTRRPDFRNDYSTPGTRELLFI 60

Query: 61  ---GDQTKFTRNPPEIRHGLDLELGDQQEEEEEEEVMGIYDLAGQ---PRFLFTIKEESN 120
                 T  + + P      + +  D Q++       G  ++ G    PRFLFTI EE+ 
Sbjct: 61  FCCSSSTNPSSSSPSSSSFSNPKPIDTQQQCPLNN--GFENVGGPGLVPRFLFTIMEETV 120

Query: 121 EDLESEE---SRTRRLSDIITAIET-----PYFTPMASPPLKASPPLSCL 145
           E++ESE+   ++ + L+D+   +E+     PY TP ASP L  +PPL+ L
Sbjct: 121 EEMESEDVVSTKGKSLNDLFLNMESGVITPPYLTPRASPSL-FTPPLTPL 165

The following BLAST results are available for this feature:

BLAST of Csor.00g016220 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g016220 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583436.1	2.42e-134	100.00	hypothetical protein SDJN03_19368, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7019199.1	8.59e-101	98.71	hypothetical protein SDJN02_18157, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023520140.1	6.90e-91	83.52	uncharacterized protein LOC111783445 [Cucurbita pepo subsp. pepo]	[more]
XP_022970569.1	9.93e-83	80.90	uncharacterized protein LOC111469506 [Cucurbita maxima]	[more]
XP_038893882.1	2.55e-50	53.24	uncharacterized protein LOC120082683 [Benincasa hispida]	[more]

BLAST of Csor.00g016220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I5Z4	4.81e-83	80.90	uncharacterized protein LOC111469506 OS=Cucurbita maxima OX=3661 GN=LOC111469506...	[more]
A0A6J1G9H1	5.81e-50	56.99	uncharacterized protein LOC111452187 OS=Cucurbita moschata OX=3662 GN=LOC1114521...	[more]
A0A5D3DEB1	3.28e-49	51.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C577	3.28e-49	51.82	uncharacterized protein LOC103497168 OS=Cucumis melo OX=3656 GN=LOC103497168 PE=...	[more]
A0A6J1KBC0	9.28e-49	54.40	uncharacterized protein LOC111492746 OS=Cucurbita maxima OX=3661 GN=LOC111492746...	[more]

BLAST of Csor.00g016220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59350.1	3.7e-15	33.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G39560.1	4.9e-07	31.18	Putative membrane lipoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..62
None	No IPR available	PANTHER	PTHR34054:SF6	TRANSMEMBRANE PROTEIN	coord: 1..43 coord: 60..155
None	No IPR available	PANTHER	PTHR34054	EXPRESSED PROTEIN	coord: 1..43 coord: 60..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g016220.m01	Csor.00g016220.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane