Csor.00g015850 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g015850
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr13: 1094949 .. 1100172 (+)
RNA-Seq ExpressionCsor.00g015850
SyntenyCsor.00g015850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTCCGTCACCGATCAGAAGAAGCGGCTCACAGAGCTGCCGCCGAGGAGAGGGAAAGTCATGATCAATATCTTCAGAAGTATTTTCAAAACCGTCAAAAGAAGCCGGAGACCGGCGCCGGGATCCAGCGGCTACAACTCGGAAGCTCAGTCCGAGTCATGAACTCACTGACTCAGCTCTGTAAATTCTCGCTCGGGGTCTCCATCTTATTAATTTAATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTAATATATAGTTCTTGAGACCCTTAATTTGTTGATTTTGGTTTCTATATATAATTTGAAGTGGAATTTTGTTATCAATTCCGATGTGGTTTTGGCGATTGGTAAAAGAATTCACCTGTGAAAATTAGGGGTTCATATGACGACAAGATGGCCCGAACAATTTGAATTATGTAAATCCGAACTATAAGAGTTGAGTTTTAAAAAAATTATGGGACTCTTTAGGTAGAATTAAATTTCAAAGAGTAACATTAAGCTAGCATCAAGGGGGTCGTAGTAGGTTCGGTCTAGGCCAACCAAGTAAGTGATTCTACTATTGGTATGGTTGGAGAGTGATGGCACGTGCCTAATAGCTCTGCACGTGTCATATGTTTGAGACAAGAGATTTATGATGTACAATCAATGAGATATGTTTCAAAGGTTATGCTATGAATGGAATGAAATTGAAAAGGAGTTGTCTTGCAACCGAGCGGTGTGTCAGTGAAGACGTTGGGTCTAGAAGAGGGGTGGATTGTGAGATCCCACGTCGGTTGGGGAGGGAAACGAAACATTTTTTACAAGGGTGTGGAAACTTCTCCCTAACAAACACGTTTTAAAAATCTTGAGAGGAAGTCTAAAAAGAAAAATCTAAAGAAGACAATATCTGCTAGCGGTGAGCTTGAACTGTTCCACCGGTACTACTCGTGCTACCTTAGAGAACTTTAATCGAGGTGATCTAGATACGGTTTATTTTAGTATTTAAGAATATAAAACATTATCGATCTAAAGTAAAGAATAGTTCTAATTAATTATGTTTATGGGGGAATCAAATGGATTTTTTAAACCCAATTTGGAAGTGCAATCATTTGCTTATTTGAGCATGTGAGCTATTTAGCGTTTATAAAATTAGGAGAATTTACGAATCAAATCTCGACTCTAATAACTCACCTTTCACAAAACTGATTCAGTTCATCGGTTTTAGTTTCAACCAAAAGATCAGGAATTGAACTAAAACGTTCCAAATGTGTGTTGAACGAAAACAAAAAGATAAAAATTTACTAAATATATAATTAAAAGATAAATTTAAGAGCTAAAAAGAGGAACGTTCTCGAATTCACAGAGAATAAGAATGAATGACCGACATTTTGAGCAGCCACATTCATTAAAGACGTGGGTCAGGTTGCGGGCCAGGTTGCGCGAATTTGGTCTTGGTGCTGCCCTACCCTACCTTTTTTTCGAAAATGTAAGAGAAATTAATGGCACGATCTGAAACCCAATACAAAAATCATAAGAAGCTGGGGCGAATTGGATGAACTGGGTTGGAAACGAACTTAAGAACGTTCAAAATATAAGATTGAACTCATTTCCCTTCGTGGGTTGTGTTGGGTCCGATTTGGACATTTTTAGATCCAACTCAATTGTTATAGTTTAATTTTTTTCATTCCAAATGGCTTTTATTAAATAATGAACCGAACCGAACCTAACCATAAATTTTTTTGGTTGGTTCAGATTGTTTTTTTTTTAATAAAAGTAAATTATTAGTTCGTAAAACATCGAGCTATTTATCGTTTAATTAAGATTTACAACTCCATTTCAATTTTTTTAAAAAATACTAGTTAAATAAATTATTTTTAAGAGTGGTTCGGAGAATAAATAATAAAAAAAATTACAAAATTAAATAAAAATAAAATAAATGCTTTTTTTAATTGACAGTAAATTTAGATTTGTTCAGTTTAACCCAATCTAGTCGTAGAGAAACTCATGAGCCAACACAATTCAGTAAAATTTTCATTATTTGAACCCAACCCGACCCAAATTAGTCCGTACTCGTGAAACGGTACAAGTTGAGTTGGATTTGATCGAATTTTTCAATTTTTTCGAACACCCCAACTAAAAATTAATATATTTCGATCCTGTTTCAATAAATTTTAAAAAAAAAAATGGAATCTATTTTTGGGAAAATAAAATTTAATTTCAAACAAAAATCCAATAAATTTGAAGATGCCATCATTTGGATAAGGATTATTTATATGATTTAGGGTTGTGTTTTATTTTTTTTTTTGTTTTTTCTTTATTCTTTTTAAAGAATATTTAACTTTGTTTTCATTTAGAAAATGAATGGATCAGATTCCAAATTTGACATAATTAAAGTGAGATTATTCCACATTAATCATGTAACTTATTTTTTTTAATTTTTAAGAGAACCGTTCGACATTTTTATCTATATTTTTTTTTGTGAGATCTTACGTCGGTTGGAGTGGAGAACGAAACATTTCAAGGATGTGAAAACCTTTCCTTAACAAATGTGTTTTAAAAATCGTGAGGCTGACGACGATACGTAATAGGCCAAAACGGACAATATCTGTTAACGGGGTGGTTTGGGCTGTTACAAATGGTATCAGAGTTAGACACTAGACAGTGTGCGAACGAGGATGTTGGGCCCATCCAAACAATATCTACTAGCAGTGGATTTGGGTTGTTACTGTATGTTTTTCCATGGACGTCAAGTAACCACTTATATTATTAATCAACTATTTAACAGCAAAAACAATTTAAAAAAATATTATTTTTGAATGAAAAACGCTTTTTAAAACAAAACAAATGTACATTTAAGAAAAATTAATAATTTTAATTATTCCATTTTAGTTTGAAATTTTCATTGAAAATAACTAAGTTTATAGTTTTTTATATTACCTTTAAATTTTTTTTAAAAAAATTAAAATACTTTTAAATTTTACCTTTAAAATAAAAATAATATTAATAATAAAAAAAAAAATCAAACATTCAAAAAGGTCATATTTGGCATTTTGCATAAAAGTTGGCAGCCACCACAATAAGAGAGAGATTCCTTAGAGTGCCTACGTGGCATCCTATTATTTCTCCATTCTTTATCCATTAATTTCTTAAATTTCCCGAATTTCAAAATAATTATGACGTCAATCATATTCCACTTCTTTTTATATATATTCTTTAAAAAAAATTAAATTAAAAGTATAACGTTAAAAAAATTACTATTATTATATCATATAATTTTATTAATTTTTATTTCATATTGTAATTCAAATACTAAAATAATAATCATTTTTAATTAATTTTTTATATAAAAATATAAAGTTTCATGTTTTCTCTTCATTGAAAAATAAAAACTTTATATTTTTTTATAATTATAATAGATAAAACAATAATTTTAAAGACTAAATTAATAAATTTAAAAAAAATCCTAAACATTATATTTTATCTATGAAAAATATAAATATATTCTTAATCTTAAAAAAAAATTTTGATGAATAATCGTTTCAAAAAAATTATAAACTTTAAAACTAATATTAATAACATTAAATATTTTTAAAACGTTTTAAACATTAGTATATATATATATATAAACCATTTATCTACGTCTAAGACATTATCTCTGGTCTAATTTAAAGTTAAATAATTCCATATTTCTCTTTTTTTTTTTTAATTTAAAGATGAATTTAAAAAAAATTAAACATTTTTTTAATAAATTTAAGAGTATTTTTGAAATATCATAGATATTCTTTTAGTTTTTTAAAATATTTAAGCTATTTTTTGAAGATAAAAATAGAACATTTAAGAATAATTTTATTAATTTAACTATGAATTTAAAATTAACAATAAATTTTTTTAAAAAAAATTAACTTTATTTTAAGAAAAATATTGGAGAGAGATGATCCGATGTCTTAGCTGGCATACAGTCATTGCTACATTTTTTTTTATATAATTATTTCGTAATAAAATCTTAAATAGTTGAGGGTATAAAAGTCACAATTTATTTTTACTTACGTCATGATTATCAAATTCTCATTTCTATGACGTCTCTCATGCTTACGTAATTAATCCTTATTTAAATTATTATATATATATATATTATTCTTAAATTTGAAAGATTTTTTAAAATTTGTCGCTAAATTTAGAAAAATATATTTAAATACGTAAGATATTTCATTATATATTTAACTTGTATTTACCAATATCTTTTATATTTCAAATATCTAACAAAATATTTTTTTTTAATTAAATTAGTCATTTTAGTGTTTCTATCAATGTAGATTATAAATTCCAATTATATAAAATTAATTAATTAATCAATTAATTAATAAAGTTATGTTTATTAATATCTTTTATGAATTGTTTGTAATTATACTCGGATCAAAAGTTTGTTTTACTCTTGTAAGATAATATTTCGAATTTCTTTCACCCGTAGGAGTTCACAACTTACTTAGAATAAGGATCAAGTTGTATATGATCATCTGGAAAAAAAAAAATTAAAGAGATATTAAATATTTCGTGGTCTAATCTTGAACAAACTTATTGTATATGATAGCTCGTACTTACATAAACAATTGAATCAAATAATTTATAACAATTACAACATGATCGTATCAATACGGTGACAACATTAATTCTAGAATCTTCTTATTGAGTGCTTATCCCAATAATGAAAAACAAAATTTCCCTTTTGTTGCACATTACCCCCTAAACTTTTAAAAATTGGAAAAAGGACCCTCATCTCTTAGGACACTGTAGCAGCCTTCTCGCACAAGCTAAGCTGAGGAGTGGGAAATCTCCAATTTACCCCTCTCTTCACTCTACAAAACCCCTTCATTTGGTACTCTTTTTCTAAGCCAATTACTTTCCCGATTTCGTCTGTTGAGACCGCCTCAGCCGCCACCCGCCGCCGTCGAATCCGCAGCTTCTCGCTGCCTTCTTACTCCTTCACTCTGCTCCGACCGCTCAATCTCCATTTCTTCCTCCGATTCCAACCGGAATTTCAATGAATTACAACAACGAACAGAAAAAGCGATTCTCCGACCTGCCGCCGAGAAGAGGACGGATCAAGATCATGATCATCCAAAGCATCATCGGAACCTTCAAATCGACGCCGGAAGGAATCGCAAGAAGCGGGAGAGAAAAGGGAACTCTAACTTCGGGTTCGACCACGCCGGCGCCAGGTACTAG

mRNA sequence

ATGAATTCCGTCACCGATCAGAAGAAGCGGCTCACAGAGCTGCCGCCGAGGAGAGGGAAAGTCATGATCAATATCTTCAGAAGTATTTTCAAAACCGTCAAAAGAAGCCGGAGACCGGCGCCGGGATCCAGCGGCTACAACTCGGAAGCTCACCAATTACTTTCCCGATTTCGTCTGTTGAGACCGCCTCAGCCGCCACCCGCCGCCGTCGAATCCGCAGCTTCTCGCTGCCTTCTTACTCCTTCACTCTGCTCCGACCGCTCAATCTCCATTTCTTCCTCCGATTCCAACCGGAATTTCAATGAATTACAACAACGAACAGAAAAAGCGATTCTCCGACCTGCCGCCGAGAAGAGGACGGATCAAGATCATGATCATCCAAAGCATCATCGGAACCTTCAAATCGACGCCGGAAGGAATCGCAAGAAGCGGGAGAGAAAAGGGAACTCTAACTTCGGGTTCGACCACGCCGGCGCCAGGTACTAG

Coding sequence (CDS)

ATGAATTCCGTCACCGATCAGAAGAAGCGGCTCACAGAGCTGCCGCCGAGGAGAGGGAAAGTCATGATCAATATCTTCAGAAGTATTTTCAAAACCGTCAAAAGAAGCCGGAGACCGGCGCCGGGATCCAGCGGCTACAACTCGGAAGCTCACCAATTACTTTCCCGATTTCGTCTGTTGAGACCGCCTCAGCCGCCACCCGCCGCCGTCGAATCCGCAGCTTCTCGCTGCCTTCTTACTCCTTCACTCTGCTCCGACCGCTCAATCTCCATTTCTTCCTCCGATTCCAACCGGAATTTCAATGAATTACAACAACGAACAGAAAAAGCGATTCTCCGACCTGCCGCCGAGAAGAGGACGGATCAAGATCATGATCATCCAAAGCATCATCGGAACCTTCAAATCGACGCCGGAAGGAATCGCAAGAAGCGGGAGAGAAAAGGGAACTCTAACTTCGGGTTCGACCACGCCGGCGCCAGGTACTAG

Protein sequence

MNSVTDQKKRLTELPPRRGKVMINIFRSIFKTVKRSRRPAPGSSGYNSEAHQLLSRFRLLRPPQPPPAAVESAASRCLLTPSLCSDRSISISSSDSNRNFNELQQRTEKAILRPAAEKRTDQDHDHPKHHRNLQIDAGRNRKKRERKGNSNFGFDHAGARY
Homology
[Close]
BLAST of Csor.00g015850 vs. NCBI nr
Match: KAG6583473.1 (hypothetical protein SDJN03_19405, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 309 bits (792), Expect = 6.47e-106
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MNSVTDQKKRLTELPPRRGKVMINIFRSIFKTVKRSRRPAPGSSGYNSEAHQLLSRFRLL 60
           MNSVTDQKKRLTELPPRRGKVMINIFRSIFKTVKRSRRPAPGSSGYNSEAHQLLSRFRLL
Sbjct: 1   MNSVTDQKKRLTELPPRRGKVMINIFRSIFKTVKRSRRPAPGSSGYNSEAHQLLSRFRLL 60

Query: 61  RPPQPPPAAVESAASRCLLTPSLCSDRSISISSSDSNRNFNELQQRTEKAILRPAAEKRT 120
           RPPQPPPAAVESAASRCLLTPSLCSDRSISISSSDSNRNFNELQQRTEKAILRPAAEKRT
Sbjct: 61  RPPQPPPAAVESAASRCLLTPSLCSDRSISISSSDSNRNFNELQQRTEKAILRPAAEKRT 120

Query: 121 DQDHDHPKHHRNLQIDAGRNRKKRERKGNSNFGFDHAGARY 161
           DQDHDHPKHHRNLQIDAGRNRKKRERKGNSNFGFDHAGARY
Sbjct: 121 DQDHDHPKHHRNLQIDAGRNRKKRERKGNSNFGFDHAGARY 161

[Close]
BLAST of Csor.00g015850 vs. NCBI nr
Match: TYK08469.1 (hypothetical protein E5676_scaffold74032G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 60.1 bits (144), Expect = 1.00e-08
Identity = 36/68 (52.94%), Postives = 42/68 (61.76%), Query Frame = 0 

Query: 1  MNSVTDQKKRLTELPPRRGKVMINIFRSIFKTVK-------RSRR-----------PAPG 50
          MNS  + +KR+ E PPRRG + I IFRSIF+TVK       RSRR           PAPG
Sbjct: 1  MNSNKEPRKRMPEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETLTSTSTTPAPG 60

[Close]
BLAST of Csor.00g015850 vs. NCBI nr
Match: KAE8652730.1 (hypothetical protein Csa_013247 [Cucumis sativus])

HSP 1 Score: 58.9 bits (141), Expect = 3.57e-08
Identity = 37/78 (47.44%), Postives = 42/78 (53.85%), Query Frame = 0 

Query: 1  MNSVTDQKKRLTELPPRRGKVMINIFRSIFKTVK-------RSRR--------------- 50
          MNS+ D +KR  E PPRRG + I IFRSIF+TVK       RSRR               
Sbjct: 1  MNSIKDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETPTSTSTSTSTS 60

[Close]
BLAST of Csor.00g015850 vs. ExPASy TrEMBL
Match: A0A0A0LV79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077190 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.92e-09
Identity = 37/72 (51.39%), Postives = 42/72 (58.33%), Query Frame = 0 

Query: 1  MNSVTDQKKRLTELPPRRGKVMINIFRSIFKTVK-------RSRR--------------- 50
          MNS+ D +KR  E PPRRG + I IFRSIF+TVK       RSRR               
Sbjct: 1  MNSIKDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETPTSTSTSTSTT 60

[Close]
BLAST of Csor.00g015850 vs. ExPASy TrEMBL
Match: A0A5D3CDP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold74032G00010 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.86e-09
Identity = 36/68 (52.94%), Postives = 42/68 (61.76%), Query Frame = 0 

Query: 1  MNSVTDQKKRLTELPPRRGKVMINIFRSIFKTVK-------RSRR-----------PAPG 50
          MNS  + +KR+ E PPRRG + I IFRSIF+TVK       RSRR           PAPG
Sbjct: 1  MNSNKEPRKRMPEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETLTSTSTTPAPG 60

The following BLAST results are available for this feature:
BLAST of Csor.00g015850 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g015850 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6583473.16.47e-106100.00hypothetical protein SDJN03_19405, partial [Cucurbita argyrosperma subsp. sorori... [more]
TYK08469.11.00e-0852.94hypothetical protein E5676_scaffold74032G00010 [Cucumis melo var. makuwa][more]
KAE8652730.13.57e-0847.44hypothetical protein Csa_013247 [Cucumis sativus][more]
BLAST of Csor.00g015850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LV791.92e-0951.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077190 PE=4 SV=1[more]
A0A5D3CDP64.86e-0952.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Csor.00g015850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g015850.m01Csor.00g015850.m01mRNA