
Csor.00g015100 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTTTAAAGCTCGTCTTTGCCTCTTCCTCTTGCTCTCGTTTGCACTCGTCAGCTCTGCTCGAACCATATCTCATTCAGGTACGCTACCAATTCAAATAGTCCTAGATTTAGGTAGTTCGTGGACTTTGAATAGCATATAAACAAAAAAAAAAATGAAGTTATGAGTTTTGTATAAACTAGATAAAAAAAAAAAAAAAAATAATAATAATAAAAAAAAAAAGTGAATCAAACATATGTTTCTAATTATTGACGTTTTAGGAAAACAAAGAACCAAGGAGGTGATGAGGGACTATGATGATCCAGGTCGTGTCCCTGGTTGGAGCCCATTATATCCGCCCGAACCACCACATTTTAAAGTTTTTGCTGTTTACGATGACCACATCAACATCAAACCTTAA ATGGAGTTTAAAGCTCGTCTTTGCCTCTTCCTCTTGCTCTCGTTTGCACTCGTCAGCTCTGCTCGAACCATATCTCATTCAGGAAAACAAAGAACCAAGGAGGTGATGAGGGACTATGATGATCCAGGTCGTGTCCCTGGTTGGAGCCCATTATATCCGCCCGAACCACCACATTTTAAAGTTTTTGCTGTTTACGATGACCACATCAACATCAAACCTTAA ATGGAGTTTAAAGCTCGTCTTTGCCTCTTCCTCTTGCTCTCGTTTGCACTCGTCAGCTCTGCTCGAACCATATCTCATTCAGGAAAACAAAGAACCAAGGAGGTGATGAGGGACTATGATGATCCAGGTCGTGTCCCTGGTTGGAGCCCATTATATCCGCCCGAACCACCACATTTTAAAGTTTTTGCTGTTTACGATGACCACATCAACATCAAACCTTAA MEFKARLCLFLLLSFALVSSARTISHSGKQRTKEVMRDYDDPGRVPGWSPLYPPEPPHFKVFAVYDDHINIKP Homology
BLAST of Csor.00g015100 vs. NCBI nr
Match: KAG6607579.1 (hypothetical protein SDJN03_00921, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 153 bits (386), Expect = 8.53e-47 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of Csor.00g015100 vs. NCBI nr
Match: XP_023522911.1 (extensin-like, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 77.8 bits (190), Expect = 6.11e-16 Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of Csor.00g015100 vs. NCBI nr
Match: XP_022948581.1 (extensin-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 77.0 bits (188), Expect = 3.07e-15 Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of Csor.00g015100 vs. NCBI nr
Match: XP_022998671.1 (extensin-like [Cucurbita maxima]) HSP 1 Score: 74.3 bits (181), Expect = 1.89e-14 Identity = 42/72 (58.33%), Postives = 50/72 (69.44%), Query Frame = 0
BLAST of Csor.00g015100 vs. NCBI nr
Match: KAG6607314.1 (hypothetical protein SDJN03_00656, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 75.1 bits (183), Expect = 6.12e-14 Identity = 41/70 (58.57%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of Csor.00g015100 vs. ExPASy TrEMBL
Match: A0A6J1G9M0 (extensin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452213 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.49e-15 Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of Csor.00g015100 vs. ExPASy TrEMBL
Match: A0A6J1KAU3 (extensin-like OS=Cucurbita maxima OX=3661 GN=LOC111493256 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 9.13e-15 Identity = 42/72 (58.33%), Postives = 50/72 (69.44%), Query Frame = 0
BLAST of Csor.00g015100 vs. ExPASy TrEMBL
Match: A0A6J1GAA0 (extensin-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452213 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.29e-13 Identity = 42/72 (58.33%), Postives = 49/72 (68.06%), Query Frame = 0
BLAST of Csor.00g015100 vs. ExPASy TrEMBL
Match: A0A0A0M0T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532240 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 7.14e-12 Identity = 37/70 (52.86%), Postives = 40/70 (57.14%), Query Frame = 0
BLAST of Csor.00g015100 vs. ExPASy TrEMBL
Match: A0A5A7SMH7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00880 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 6.76e-10 Identity = 36/72 (50.00%), Postives = 43/72 (59.72%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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