Csor.00g013240 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g013240
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr02: 9752322 .. 9754040 (+)
RNA-Seq ExpressionCsor.00g013240
SyntenyCsor.00g013240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCAAAGGGACGAAGAGAAGAGGACTAGATTGTATTGGCTTACCAGTCACATTCGTGTAAGGATCATCAGCAAAGATTTCAAGGGAGGAAAGTTTTATCTCAAAAAAGGAGAGATAGTTGACGTAGTTGGACCCACCATTTGTGATATATCCATTGATGAAAGTAGAGAGCTTGTTCAAGGGGTCTCTCAAGAGCTTCTTGAGACAGCACTTCCCAGACGTGGGGGACCCGTTCTTGTTCTGTATGGTAAGCACAAGGGCGTTTATGGGAGTTTAGTTGAGAGGGATCTTGACAAAGAGACAGGGGTAGTGCGTGATGCTGATAGCCATGAATTATGTAATGTGCGTTTAGAACAGGTTGCTGAATATCTTGGTGACCCAACTTACTTGAGGTATTGATTCTTTGTAGCCAAGATGACGCTGGACCTGTCTTAGTGCATACTGTGTGTACACCAGGTACTTCTGGTCCTGTTCATATTTCTTATTCATACTTAGTCGCCCTATCTATTACTTTGTTCAAGGATGTTTAAATTAGGAACATATTTTAACCTTAAAGACAAACTGAAATTTTAAAAACTTTGAGACCAAATTAAAGATAGGGTAATTTAACTATCCAAGGCACCAAAATGGCATAACTATGTTTTAACTTTAAATTCTCTAGCTTGTTTCAGCGTGTCTACATGTCTATAGCTGTTGTCTCCATCATTTTAGTCGATCTGTCTAGCTAATAGCTTGGAGGATTAAGATTTTATTCTTCTCCGATATGATGATATTGGGGATTAGGCAATCTGTTGTTACGTTCTGATCGATGATATCGTGTCTTTCAGAGTTTGGGATAAAAACCATGGTGACACGTAGCTGTGACGTTTTCTTAACAAGTCTCTTGCATGAATGAGGCGCCTATGTGCTTAAGTGCGTGATAAGTTGTCTTAGAGTGCTCAGTGCATGGAGTGTACGCAGAAAACGCCTGCATCTGTCAAATGTAGTGGTGATACTCATTCTCTGTTACCCTCAGGATGCTCCTGAATACTGAACTTTGGTAATTTTCATTTCGTTGCTTTGCAAATTAGCTTCTTTGCAGTACTACTACATTCATTTGATGAAAGTGTCTGACAGTTTGCATATTGAGTATTGAGTCGACGGATATAATAGGTTCAGAATTCTAGATAATTCTCTCTTTATCAGTGGATTGGTCGCCATCTTCATTTCTCGGTTTCGGTCGATTTAAACATCACATTACCTTCATTTCTCGGTCTCGGTCGATTTAAACATCTTTATCAGTGGATTGGTCGCCATCTTCCTTTTGGGTAATACTGCTATTGCTTGGTGTATGTAAGAAAATATGGCTATCTCGGCTAGTGACTGGGTTCATTGGCCACACCTTTCATTTCAAAGCATGAAGAACAGACTGTGAACTTGTGCCCTACCAAACATGCAGGCGGTTGGGAGATATGCATCTCTGATTGATAAGAAGAAAACCCTGATTGATTGTGATAGCATGATCGTCAGAGACTGGAAAATCCTGGATATCAATATGCTGATTCATGCAATGAATTGGGCTGTGAAGGGCTATGGGAGATATCAGCCATGTAATGAATCCACAACCTCAGCCTTTTTTTATGTATTGTCTTATAGTATGCTTATCTGAATGACTTCGACATTGCCTTCCTCCTCCACAGCTCGCCAGCCGGAGACACAGGGTCAATGGAAAGAGTAA

mRNA sequence

ATGGTCAAAGGGACGAAGAGAAGAGGACTAGATTGTATTGGCTTACCAGTCACATTCGTCACTTCCCAGACGTGGGGGACCCGTTCTTGTTCTGTATGCCAAGATGACGCTGGACCTGTCTTAGTGCATACTGTGTGTACACCAGAGTTTGGGATAAAAACCATGGCGGTTGGGAGATATGCATCTCTGATTGATAAGAAGAAAACCCTGATTGATTGTGATAGCATGATCGTCAGAGACTGGAAAATCCTGGATATCAATATGCTGATTCATGCAATGAATTGGGCTGTGAAGGGCTATGGGAGATATCAGCCATCTCGCCAGCCGGAGACACAGGGTCAATGGAAAGAGTAA

Coding sequence (CDS)

ATGGTCAAAGGGACGAAGAGAAGAGGACTAGATTGTATTGGCTTACCAGTCACATTCGTCACTTCCCAGACGTGGGGGACCCGTTCTTGTTCTGTATGCCAAGATGACGCTGGACCTGTCTTAGTGCATACTGTGTGTACACCAGAGTTTGGGATAAAAACCATGGCGGTTGGGAGATATGCATCTCTGATTGATAAGAAGAAAACCCTGATTGATTGTGATAGCATGATCGTCAGAGACTGGAAAATCCTGGATATCAATATGCTGATTCATGCAATGAATTGGGCTGTGAAGGGCTATGGGAGATATCAGCCATCTCGCCAGCCGGAGACACAGGGTCAATGGAAAGAGTAA

Protein sequence

MVKGTKRRGLDCIGLPVTFVTSQTWGTRSCSVCQDDAGPVLVHTVCTPEFGIKTMAVGRYASLIDKKKTLIDCDSMIVRDWKILDINMLIHAMNWAVKGYGRYQPSRQPETQGQWKE
Homology
[Close]
BLAST of Csor.00g013240 vs. NCBI nr
Match: KAG6606294.1 (hypothetical protein SDJN03_03611, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 248 bits (634), Expect = 3.00e-83
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   MVKGTKRRGLDCIGLPVTFVTSQTWGTRSCSVCQDDAGPVLVHTVCTPEFGIKTMAVGRY 60
           MVKGTKRRGLDCIGLPVTFVTSQTWGTRSCSVCQDDAGPVLVHTVCTPEFGIKTMAVGRY
Sbjct: 1   MVKGTKRRGLDCIGLPVTFVTSQTWGTRSCSVCQDDAGPVLVHTVCTPEFGIKTMAVGRY 60

Query: 61  ASLIDKKKTLIDCDSMIVRDWKILDINMLIHAMNWAVKGYGRYQPSRQPETQGQWKE 117
           ASLIDKKKTLIDCDSMIVRDWKILDINMLIHAMNWAVKGYGRYQPSRQPETQGQWKE
Sbjct: 61  ASLIDKKKTLIDCDSMIVRDWKILDINMLIHAMNWAVKGYGRYQPSRQPETQGQWKE 117

The following BLAST results are available for this feature:
BLAST of Csor.00g013240 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g013240 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6606294.13.00e-83100.00hypothetical protein SDJN03_03611, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g013240 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g013240 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g013240.m01Csor.00g013240.m01mRNA