Csor.00g012620 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATACTGTGGCTTTGAGAACGGAATCTAGTCGACCAATTAATTCTACTACTCCAAATCAATTGATTGTCGGCAAGGTTTGTATTATATACAGTGACGGTTCAAGGTTCGTTTTTTAATTTAGTGTCTTCAATGTTCCGTCTATGATGTTGTTAGACTCATGGCAGGAGGGCAATTGTTTTGTCTAATTGAATTAATGATATTATCGTAACATCCAATTTGAATTTAAAACATAAAAGCTTATTTATTTTTTTAAAATCTGACGTGCGTCATATTTGTGGCAGAGACGTATGGGGGATATGTTTGCTTTTCACGCCACCATTATGGCCAACACCCTAAATACTCCTATCATCGTTTTCACTAGAACTGGCTCCATGGCTATACTCTTAAGTCATTATAGGCCCTGCTCTACTATCTTTGCCTTCACTGATGAGTAAGTTCCAACGCGATGTAATGTATTACAATTTCCTTGTATTTCATGCACAATTTTGGATATTTTCTACCCTTACTAATTTATACAGTTCGTATCTTTAAGATGATTTAGGTGAATGTGTCTTTGTATATGTGGTGTTAAGTATGAATACTTTGCCATGAGAATGTAGAGTTTTCTGTTAATATATATGTAAACTTTTAATAGTTGTGTGGAATAGTAGCTTTCTGGGTCCAGGATGAAACCCTAAAATGTATTCCATGTATTTGTAGCTCTAGATAGAGATAAAATAATGCAAGATTTAATGACTTACCGCACTATCAAAATCTTCGATTGTTGTTTGAAAAAGACTATTTAGCGTGTCATTTATGTGAAGTTGGATCTGTCTTTCTTTGAACGGGATGTAGTTCACACTTGATTTTGCCGATTAGAAGGTAAAGCATTTGTGTATTTTCGCTCTTTATTTGAATTTTTTGACGACTTGAAGAGTATCTCCTAGATTCATTTGACATGCAGCCAAAGAATTAAACAAAGGCTGGTGCTTTATCATGGGGTCATGCCCATCTACATGCAGTTTTCAAATGATGCAGAAGAGACGTTCTCCAGAGCACTCAAGTTTTTACTGGTTAGTTTTTCTTTATCGTTTTACCTTTCTTTCTCTATTTCCTTGTGTTTTTTTCAAAGATCCTTCAAGAATTTGGTTTTAAATTTCCTACGTTTGCAGAATAAGGGCCACGTGGTAGGGGGAGACAACGTTACACTTGTCCAAAGTGGAGCTCAACCAATTTGGCGGAAAGAATCTACTCACCACATTCAAGTACGTAGGATCCAAGGGTGA ATGCATACTGTGGCTTTGAGAACGGAATCTAGTCGACCAATTAATTCTACTACTCCAAATCAATTGATTGTCGGCAAGAGACGTATGGGGGATATGTTTGCTTTTCACGCCACCATTATGGCCAACACCCTAAATACTCCTATCATCGTTTTCACTAGAACTGGCTCCATGGCTATACTCTTAAGTCATTATAGGCCCTGCTCTACTATCTTTGCCTTCACTGATGACCAAAGAATTAAACAAAGGCTGGTGCTTTATCATGGGGTCATGCCCATCTACATGCAGTTTTCAAATGATGCAGAAGAGACGTTCTCCAGAGCACTCAAGTTTTTACTGAATAAGGGCCACGTGGTAGGGGGAGACAACGTTACACTTGTCCAAAGTGGAGCTCAACCAATTTGGCGGAAAGAATCTACTCACCACATTCAAGTACGTAGGATCCAAGGGTGA ATGCATACTGTGGCTTTGAGAACGGAATCTAGTCGACCAATTAATTCTACTACTCCAAATCAATTGATTGTCGGCAAGAGACGTATGGGGGATATGTTTGCTTTTCACGCCACCATTATGGCCAACACCCTAAATACTCCTATCATCGTTTTCACTAGAACTGGCTCCATGGCTATACTCTTAAGTCATTATAGGCCCTGCTCTACTATCTTTGCCTTCACTGATGACCAAAGAATTAAACAAAGGCTGGTGCTTTATCATGGGGTCATGCCCATCTACATGCAGTTTTCAAATGATGCAGAAGAGACGTTCTCCAGAGCACTCAAGTTTTTACTGAATAAGGGCCACGTGGTAGGGGGAGACAACGTTACACTTGTCCAAAGTGGAGCTCAACCAATTTGGCGGAAAGAATCTACTCACCACATTCAAGTACGTAGGATCCAAGGGTGA MHTVALRTESSRPINSTTPNQLIVGKRRMGDMFAFHATIMANTLNTPIIVFTRTGSMAILLSHYRPCSTIFAFTDDQRIKQRLVLYHGVMPIYMQFSNDAEETFSRALKFLLNKGHVVGGDNVTLVQSGAQPIWRKESTHHIQVRRIQG Homology
BLAST of Csor.00g012620 vs. ExPASy Swiss-Prot
Match: P55964 (Pyruvate kinase isozyme G, chloroplastic (Fragment) OS=Ricinus communis OX=3988 PE=2 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 4.3e-61 Identity = 116/148 (78.38%), Postives = 133/148 (89.86%), Query Frame = 0
BLAST of Csor.00g012620 vs. ExPASy Swiss-Prot
Match: Q40546 (Pyruvate kinase isozyme G, chloroplastic OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 7.9e-55 Identity = 103/148 (69.59%), Postives = 126/148 (85.14%), Query Frame = 0
BLAST of Csor.00g012620 vs. ExPASy Swiss-Prot
Match: Q93Z53 (Plastidial pyruvate kinase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PKP3 PE=1 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 3.4e-50 Identity = 97/148 (65.54%), Postives = 124/148 (83.78%), Query Frame = 0
BLAST of Csor.00g012620 vs. ExPASy Swiss-Prot
Match: Q9FLW9 (Plastidial pyruvate kinase 2 OS=Arabidopsis thaliana OX=3702 GN=PKP2 PE=1 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 2.0e-45 Identity = 87/147 (59.18%), Postives = 112/147 (76.19%), Query Frame = 0
BLAST of Csor.00g012620 vs. ExPASy Swiss-Prot
Match: Q40545 (Pyruvate kinase isozyme A, chloroplastic OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.5e-10 Identity = 37/98 (37.76%), Postives = 51/98 (52.04%), Query Frame = 0
BLAST of Csor.00g012620 vs. NCBI nr
Match: KAG6606233.1 (hypothetical protein SDJN03_03550, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 303 bits (776), Expect = 7.21e-104 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Csor.00g012620 vs. NCBI nr
Match: XP_022995339.1 (pyruvate kinase isozyme G, chloroplastic-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 303 bits (776), Expect = 4.13e-99 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Csor.00g012620 vs. NCBI nr
Match: XP_023533085.1 (pyruvate kinase isozyme G, chloroplastic-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 303 bits (776), Expect = 4.13e-99 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Csor.00g012620 vs. NCBI nr
Match: XP_023533084.1 (pyruvate kinase isozyme G, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 303 bits (776), Expect = 4.25e-99 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Csor.00g012620 vs. NCBI nr
Match: XP_022931062.1 (pyruvate kinase isozyme G, chloroplastic-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 301 bits (770), Expect = 3.32e-98 Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of Csor.00g012620 vs. ExPASy TrEMBL
Match: A0A6J1K5F3 (Pyruvate kinase OS=Cucurbita maxima OX=3661 GN=LOC111490915 PE=3 SV=1) HSP 1 Score: 303 bits (776), Expect = 2.00e-99 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Csor.00g012620 vs. ExPASy TrEMBL
Match: A0A6J1ESF9 (Pyruvate kinase OS=Cucurbita moschata OX=3662 GN=LOC111437364 PE=3 SV=1) HSP 1 Score: 301 bits (770), Expect = 1.61e-98 Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of Csor.00g012620 vs. ExPASy TrEMBL
Match: A0A6J1K7M9 (Pyruvate kinase OS=Cucurbita maxima OX=3661 GN=LOC111490915 PE=3 SV=1) HSP 1 Score: 303 bits (776), Expect = 2.22e-98 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Csor.00g012620 vs. ExPASy TrEMBL
Match: A0A6J1ESN3 (Pyruvate kinase OS=Cucurbita moschata OX=3662 GN=LOC111437364 PE=3 SV=1) HSP 1 Score: 301 bits (770), Expect = 1.77e-97 Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of Csor.00g012620 vs. ExPASy TrEMBL
Match: A0A1S3CRS5 (Pyruvate kinase OS=Cucumis melo OX=3656 GN=LOC103504001 PE=3 SV=1) HSP 1 Score: 272 bits (696), Expect = 4.82e-87 Identity = 135/149 (90.60%), Postives = 139/149 (93.29%), Query Frame = 0
BLAST of Csor.00g012620 vs. TAIR 10
Match: AT1G32440.1 (plastidial pyruvate kinase 3 ) HSP 1 Score: 199.1 bits (505), Expect = 2.4e-51 Identity = 97/148 (65.54%), Postives = 124/148 (83.78%), Query Frame = 0
BLAST of Csor.00g012620 vs. TAIR 10
Match: AT5G52920.1 (plastidic pyruvate kinase beta subunit 1 ) HSP 1 Score: 183.3 bits (464), Expect = 1.4e-46 Identity = 87/147 (59.18%), Postives = 112/147 (76.19%), Query Frame = 0
BLAST of Csor.00g012620 vs. TAIR 10
Match: AT3G22960.1 (Pyruvate kinase family protein ) HSP 1 Score: 65.1 bits (157), Expect = 5.5e-11 Identity = 44/139 (31.65%), Postives = 67/139 (48.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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