Csor.00g012340 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g012340
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RGG repeats nuclear RNA binding protein A-like
Location	Csor_Chr02: 9257158 .. 9259827 (+)
RNA-Seq Expression	Csor.00g012340
Synteny	Csor.00g012340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACCATGAACCCTTTTGATCTCTTGGTCGACGACGATAACGAGGACCCTAACCAGCTCGCCTCAGCTCAGCGGTCCGCTCCGGCGCCGCCGTCCAAGAAGGCACCGGCTCCGGCTCAGCCTGCGAAAGCGGCTAAGCTTCCTTCCAAGCCTCTTCCTCCTGCTCAGGCTGGTGAGTCTTGTTCATCGACTTGTACTCTTGTTTGGATTCGAATCAGGAACAATGAGCTTTTCGATTTGTTTGCTTATGGTTTTGTCATCCATGTGATGTTTGGTCATTTTTTTTTGGATTTGTTGTTATTAGTGGTAGTTGGTGGGTTTGTTTGCAAAGCGGTCATAATGTTTGATTGGATGTATTGAAGTTCCTCTGGTTCCATTGTTTGTTATTTGTTTCTTGTGGATTGAACTTATTGCCTAAATTATAGTTCATTCGATCTATACGATTGACTGGTATAGCCTAGTTTTGTTATTCTTCTGTGGTTAATGATTTTTTATTTTTATTTTTTATGAATATATGACATATCTGATTTAGATTGATTTGAAAAATATTGATTGTTCTAACCATTCGTTTTTAAATTTCTGGTTTGCTTTTACATGCTACAGGTAAATTAAACGTCTTAAAAGAAATCATTCAATGAAGGGACTAGAATATTAAAAACCATTTATCTCAAGGATTAAGCAAATCTTTTAGAATGTGGTGTACGATCTAATAAAATAGGTAATTACGTTGTTGTTGATATTACATAGATAGTATGCTCTTTGTGCTTCCTTCGTTGGTATAATTAACTTAATTCCCTTATGCCATGCCAAATAACTGCCTGAGCAGGAGCTGGTACATGGAAAGAGGTATTCATATTGAAAGTCAGTATTACAGTACTTTTAATTAGTATTGTTGTAAGTTACAGTGTTGATTTTATTTCTGTTAAAGAGCTTATGAATTAGGGGACATAGGTATTATTTTTTTAGTATGGCTACTACTTTCATTGATGAAATGTACTTTGTACATTATTTTGACTCTATTTTTGTTTATGACCAGTAAGGGAGGCAAAGAATGAAAATAGCCGTGGTCGTGGAGGTGGGCGTGGCTATGGACGAGGACGTGGTGGTGGTGGAGGATTCAACAGAGACTCGGCCAATAATGAAAATGGGGGCAAGAATGGGTTCTCCGATCGATACCAGCCAACTGAGGAAGGTGAAAAGGAAGCTGAGAAGCGTGGTTATGGTGCATCCTATGGCTCTTTTCGTGGTCCTCGTCGTGGTGGCTTCAGCAATGGGGAAACAGAAGAAGGGGAACGACCTCGAAGATTATATGAACGCCGAAGTGGAACTGGACGTGGGTTAGTAAATTCTTTTCTCAAAATACTAGTTCCTGTTTCATCAATTTCCTATAAATTTGTTTTTCTATTTATCTTACCCTGGTAGCCTTTTGATTTAGAAATGAGTACAAGCGTGATGGAGCTGGCCGTAGGAACTGGGGAGCTCCTGGTGAAGAAATTTCCCCGTAAGTTTCCCTTGTCCAATTTTGAAAAATTATCTGATTTGATAATGCTGAACTTGTCTTTACTTGACTTGTGAATTTCAAGGGATGTGGAAGAGCCTGTTGCTGAAAATGAGAAGATTATTGCATCAGAGCAACAATTGGGAGAGGATGGCGATGTCAACGACAACAACAAAGAGGAGGCTGTGAAGGAACCAGAAGAGAAGGAACCTGAGGACAAGGTAGGACATCGTACTTGAAGTATTGATATATTGGTTAGTATGCCAAATCAATTGGCCATATAATCTGTTTCTTCTATCATTTTACAGGAAATGACTCTCAAAGAGTATGAGAAGCTCCGTGAAGAGAGTAGGAAACTGTTGGCAAAGACTGAGTTGAGGAAGGCTGAGATTGATGAAGAGTTGGAGAACATGCAGCAGATTTCCAGCAAGAAAACCAATGATGAAATCTTTGCTAAATTGGTGAGGGCTTCTCCCATTTTACTCTCGCGATTCCATCTTTAGCTTTGCTTTTGTTGTTAACTGTACACATTTTTGTTGTCAGGGTGCTGATAAGGATAAACGCAAAGATAATGCTGACAAGGAGGAGAAAGCTAAGAAGGTATGCATCGTATTGTTCTTCCAGCAACTCATAACTGTCTGGTCTTAATTAATTACATGTCAGAAATTAAACTGAATTGTTTTCTTTGCATTTGTCAATACTAAAATTATTGATGGGTTTTGTGGTTACGAATGATATTTTCTTGGCATTTGCTTGCATATGTTCATTTGGTATGCAACTTAAAAATGTTGGTCAGGATTTACTTATGCAGTTTTGAGCTACTCTAAATTTTCGTTCATTAGTATTCAAGTGCCTAGTGGTTCATGTATATGGTGTTTCCACTCGGGCCAACCATAGTTTATCTTGAACCCGTGTTCTTCATACACTTGATATTTCCTGAACTAATTCAAGTAATTGTTTTTGGTTTGTAGTCTGTGACCATAACTGAGTTCCTGAAGCCTGCTAAAGGTGAGAAGTACTATAGCCCCGGTGGACGTGGTAGGGGCCGTGGGCGAGGCTCAAGAGGTGGGCTCAATAACGGCAACGGTGGCAACGGTAGCAACAGAATGAATGTGGCAGCCCCCTCCATTGAAGATCCAGGGCAGTTCCCTTCGTTGAGTGCCAAGTGA

mRNA sequence

ATGGCAACCATGAACCCTTTTGATCTCTTGGTCGACGACGATAACGAGGACCCTAACCAGCTCGCCTCAGCTCAGCGGTCCGCTCCGGCGCCGCCGTCCAAGAAGGCACCGGCTCCGGCTCAGCCTGCGAAAGCGGCTAAGCTTCCTTCCAAGCCTCTTCCTCCTGCTCAGGCTGTAAGGGAGGCAAAGAATGAAAATAGCCGTGGTCGTGGAGGTGGGCGTGGCTATGGACGAGGACGTGGTGGTGGTGGAGGATTCAACAGAGACTCGGCCAATAATGAAAATGGGGGCAAGAATGGGTTCTCCGATCGATACCAGCCAACTGAGGAAGGTGAAAAGGAAGCTGAGAAGCGTGGTTATGGTGCATCCTATGGCTCTTTTCGTGGTCCTCGTCGTGGTGGCTTCAGCAATGGGGAAACAGAAGAAGGGGAACGACCTCGAAGATTATATGAACGCCGAAGTGGAACTGGACGTGGAAATGAGTACAAGCGTGATGGAGCTGGCCGTAGGAACTGGGGAGCTCCTGGTGAAGAAATTTCCCCGGATGTGGAAGAGCCTGTTGCTGAAAATGAGAAGATTATTGCATCAGAGCAACAATTGGGAGAGGATGGCGATGTCAACGACAACAACAAAGAGGAGGCTGTGAAGGAACCAGAAGAGAAGGAACCTGAGGACAAGGAAATGACTCTCAAAGAGTATGAGAAGCTCCGTGAAGAGAGTAGGAAACTGTTGGCAAAGACTGAGTTGAGGAAGGCTGAGATTGATGAAGAGTTGGAGAACATGCAGCAGATTTCCAGCAAGAAAACCAATGATGAAATCTTTGCTAAATTGGGTGCTGATAAGGATAAACGCAAAGATAATGCTGACAAGGAGGAGAAAGCTAAGAAGTCTGTGACCATAACTGAGTTCCTGAAGCCTGCTAAAGGTGAGAAGTACTATAGCCCCGGTGGACGTGGTAGGGGCCGTGGGCGAGGCTCAAGAGGTGGGCTCAATAACGGCAACGGTGGCAACGGTAGCAACAGAATGAATGTGGCAGCCCCCTCCATTGAAGATCCAGGGCAGTTCCCTTCGTTGAGTGCCAAGTGA

Coding sequence (CDS)

ATGGCAACCATGAACCCTTTTGATCTCTTGGTCGACGACGATAACGAGGACCCTAACCAGCTCGCCTCAGCTCAGCGGTCCGCTCCGGCGCCGCCGTCCAAGAAGGCACCGGCTCCGGCTCAGCCTGCGAAAGCGGCTAAGCTTCCTTCCAAGCCTCTTCCTCCTGCTCAGGCTGTAAGGGAGGCAAAGAATGAAAATAGCCGTGGTCGTGGAGGTGGGCGTGGCTATGGACGAGGACGTGGTGGTGGTGGAGGATTCAACAGAGACTCGGCCAATAATGAAAATGGGGGCAAGAATGGGTTCTCCGATCGATACCAGCCAACTGAGGAAGGTGAAAAGGAAGCTGAGAAGCGTGGTTATGGTGCATCCTATGGCTCTTTTCGTGGTCCTCGTCGTGGTGGCTTCAGCAATGGGGAAACAGAAGAAGGGGAACGACCTCGAAGATTATATGAACGCCGAAGTGGAACTGGACGTGGAAATGAGTACAAGCGTGATGGAGCTGGCCGTAGGAACTGGGGAGCTCCTGGTGAAGAAATTTCCCCGGATGTGGAAGAGCCTGTTGCTGAAAATGAGAAGATTATTGCATCAGAGCAACAATTGGGAGAGGATGGCGATGTCAACGACAACAACAAAGAGGAGGCTGTGAAGGAACCAGAAGAGAAGGAACCTGAGGACAAGGAAATGACTCTCAAAGAGTATGAGAAGCTCCGTGAAGAGAGTAGGAAACTGTTGGCAAAGACTGAGTTGAGGAAGGCTGAGATTGATGAAGAGTTGGAGAACATGCAGCAGATTTCCAGCAAGAAAACCAATGATGAAATCTTTGCTAAATTGGGTGCTGATAAGGATAAACGCAAAGATAATGCTGACAAGGAGGAGAAAGCTAAGAAGTCTGTGACCATAACTGAGTTCCTGAAGCCTGCTAAAGGTGAGAAGTACTATAGCCCCGGTGGACGTGGTAGGGGCCGTGGGCGAGGCTCAAGAGGTGGGCTCAATAACGGCAACGGTGGCAACGGTAGCAACAGAATGAATGTGGCAGCCCCCTCCATTGAAGATCCAGGGCAGTTCCCTTCGTTGAGTGCCAAGTGA

Protein sequence

MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVREAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGYGASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEISPDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREESRKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTITEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSAK

Homology

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BLAST of Csor.00g012340 vs. ExPASy Swiss-Prot
Match: O23523 (RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGGA PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 5.2e-68
Identity = 203/376 (53.99%), Postives = 248/376 (65.96%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAA-KLPSKPLPPAQAV 60
           MAT+NPFDLL DDD EDP+QLA A         K     + PAK+A KLPSKPLPPAQAV
Sbjct: 1   MATLNPFDLL-DDDAEDPSQLAVAIEKID-KSKKSGQVSSLPAKSAPKLPSKPLPPAQAV 60

Query: 61  REAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRY-QPTEEGE---KEA 120
           REA+++  RG GG  G+ RGR   GG+NRD       G NG+S  Y +P+ EG+      
Sbjct: 61  REARSDAPRGGGGRGGFNRGR---GGYNRDD------GNNGYSGGYTKPSGEGDVSKSSY 120

Query: 121 EKR-GYGASYGSFRGP-------RRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGA 180
           E+R G GA  GSFRG        RRGGFSN E  +GERPRR +ERRSGTGRG+++KRDG+
Sbjct: 121 ERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRDGS 180

Query: 181 GRRNWGAPGEEISPDVEEPV-AENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDK 240
           GR NWG PGEEI+ + E     E EK +  +  +  D    D NKE+ V   EEKEPEDK
Sbjct: 181 GRGNWGTPGEEIAAETEAVAGVETEKDVGEKPAV--DDVAADANKEDTV--VEEKEPEDK 240

Query: 241 EMTLKEYEKLREESRKLLAKTELRKAEIDEEL-ENMQQISSKKTNDEIFAKLGADKDKRK 300
           EMTL EYEK+ EE +K L      + ++D ++ E+MQQ+S+KK+NDEIF KLG+DKDKRK
Sbjct: 241 EMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKDKRK 300

Query: 301 DNADKEEKAKKSVTITEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVA 360
           D  DKEEKAKK+V+I EFLKPA+G  YY  G  GRGRG   RGG+++G  G   N    A
Sbjct: 301 D--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYRNE---A 355

Query: 361 APSIEDPGQFPSLSAK 362
           AP+I D  QFPSL  K
Sbjct: 361 APAIGDAAQFPSLGGK 355

[Close]

BLAST of Csor.00g012340 vs. ExPASy Swiss-Prot
Match: Q9SQ56 (RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=4097 GN=RggA PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.7e-66
Identity = 176/305 (57.70%), Postives = 221/305 (72.46%), Query Frame = 0


Query: 69  GRGGGRGYGRGR--GGGGGFNRDSANNEN--GGKNGFSDRYQPTEEGE--KEAEKR-GYG 128
           GRGG RG GRGR  G G GFN++SA++EN  G  NGFS RY+  E+GE  K +E+R GYG
Sbjct: 4   GRGGPRGGGRGRGPGRGRGFNQESADDENAFGSNNGFSGRYRVQEDGESGKLSERRGGYG 63

Query: 129 ASYGSFRGPRRGGFSNGETE--EGERPRRLYERRSGTGRGNEY-KRDGAGRRNWGAPGEE 188
              G F G RRGGF+NG+    EGERPRR+++RRSGTGRGNEY KR+G+GR NWG P ++
Sbjct: 64  GPRGGFHGGRRGGFNNGDAAEGEGERPRRVFDRRSGTGRGNEYIKREGSGRGNWGTPADD 123

Query: 189 ISPDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLRE 248
           I+ + E PV + EKI+ +E++ G++ +  D NK+    EPEEKEPE+KEMTL+EYEKL E
Sbjct: 124 IAQETEVPVNDGEKIVEAEKEAGQE-EAEDTNKDSTAAEPEEKEPEEKEMTLEEYEKLME 183

Query: 249 ESRK--LLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKK 308
           E RK  L  K E RK  +D+ELE+MQ +S+KK +DEIF KLG++K+KRK+     EKA+K
Sbjct: 184 EKRKALLALKPEERKVNLDKELESMQLLSNKKNDDEIFIKLGSEKEKRKEAV---EKARK 243

Query: 309 SVTITEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFP 362
           + +I EFLKPA+GE Y   GGRGRG GRG RGG   G GGN S     +APSIED GQFP
Sbjct: 244 TQSINEFLKPAEGENYSRRGGRGRGPGRG-RGGFGGGVGGNKS----FSAPSIEDVGQFP 299

[Close]

BLAST of Csor.00g012340 vs. ExPASy Swiss-Prot
Match: Q9LVT8 (RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGGC PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.1e-57
Identity = 186/371 (50.13%), Postives = 239/371 (64.42%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60
           MA++NPFDLL  DD EDP+QLA A     +   +KA A  QP KAAK P+KP PP+QAVR
Sbjct: 1   MASLNPFDLL-GDDAEDPSQLAVAL----SQKVEKAAAAVQPPKAAKFPTKPAPPSQAVR 60

Query: 61  EAKNENSRGRG--GGR-GYGRGRGGGGGFNRDSANNE-NGGKNGFSDRYQPTEEGEKEAE 120
           E++N    GRG  GGR G+ RGR G GG+NRD+ NN+  G +NGFS  Y+   E    A 
Sbjct: 61  ESRNAPQGGRGGTGGRGGFSRGR-GNGGYNRDNRNNDAPGNENGFSGGYRRPSEDADGAS 120

Query: 121 KRGYGASY---GSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWG 180
           + G    Y   G   GPRRGG +NGE+ + ERP R Y+R S TG G   KR+G GR NWG
Sbjct: 121 RGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRGNWG 180

Query: 181 APGEEISPDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPED---KEMTL 240
              ++I P  EEP  E EK   +E+Q GED +  +  KE   +E  +KE E+   +EMTL
Sbjct: 181 TTEDDIPPTSEEPTTEVEKSPVAEKQGGED-ETPEAKKELTAEEKAQKEAEEAEAREMTL 240

Query: 241 KEYEKLREESRKLLAKTELRKAEIDEEL-ENMQQISSKK-TNDEIFAKLGADKDKRKDNA 300
           +EYEK+ EE +K L  T++ + ++D ++ E+MQQ+S+KK T++EIF KLG+DK+KRK   
Sbjct: 241 EEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRK--- 300

Query: 301 DKEEKAKKSVTITEFLKPAKGEKYYSPGGRGRG-RGRGSRGGLNNGNGGNGSNRMNVAAP 359
           D  EKAKKS++I EFLKPA G++Y    GRG G RGRG RGG   G GGN       AAP
Sbjct: 301 DATEKAKKSLSINEFLKPADGKRY---NGRGGGSRGRGGRGG--RGEGGNQRYAKEAAAP 356

[Close]

BLAST of Csor.00g012340 vs. ExPASy Swiss-Prot
Match: O23593 (RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGGB PE=1 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.4e-57
Identity = 178/374 (47.59%), Postives = 234/374 (62.57%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60
           MA++NPFDLL DDD EDP+Q+ +++         K  AP Q AK+ K+P+KP PP+QAVR
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVASK-------PLKVVAPVQTAKSGKMPTKPPPPSQAVR 60

Query: 61  EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNEN-GGKNGFSDRYQPTEEGEKEAEKRG 120
           EA+N    GRG GRG   GRGG GG NRDS NN+    +NG+   Y+ +EEG+       
Sbjct: 61  EARNAPGGGRGAGRGGSYGRGGRGGNNRDSRNNDGPANENGYGGGYRRSEEGDGARR--- 120

Query: 121 YGASYGSFRGPRRGGFSN-GETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEE 180
            G   G +RG RRG +SN G++ + ERPR+ Y+R S T  GNE KRDGAGR NWG   ++
Sbjct: 121 -GGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQDD 180

Query: 181 ISPDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLRE 240
           I+P  EE  A  +K +  E+Q GE G+  D   E   ++ EEK PEDKEMTL+EYEK+ E
Sbjct: 181 ITPVTEESTAVVDKNLTVEKQDGE-GEATDAKNETPAEKAEEK-PEDKEMTLEEYEKVLE 240

Query: 241 ESRKLLAKTELRKAEID-EELENMQQISSKKT-NDEIFAKLGADKDKRKDNADKEEKAKK 300
           E +K L  T++ + ++D +  E MQQ+SSKK+ NDE+F KLG +KDKR    ++EEK +K
Sbjct: 241 EKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR--ITEREEKTRK 300

Query: 301 SVTITEFLKPAKGEKYYSPGG--RGRGRGRGSR------GGLNNGNGGNGSNRMNVAA-- 359
           S++I EFLKPA G+ YY P G  +G   GRG R      GG N   GG        AA  
Sbjct: 301 SLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGRNQRDGGAAAQA 358

[Close]

BLAST of Csor.00g012340 vs. NCBI nr
Match: KAG6606205.1 (RGG repeats nuclear RNA binding protein B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 655 bits (1691), Expect = 2.77e-236
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60

Query: 61  EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY 120
           EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY
Sbjct: 61  EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY 120

Query: 121 GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS 180
           GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS
Sbjct: 121 GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS 180

Query: 181 PDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES 240
           PDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES
Sbjct: 181 PDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES 240

Query: 241 RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI 300
           RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI
Sbjct: 241 RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI 300

Query: 301 TEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSA 360
           TEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSA
Sbjct: 301 TEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSA 360

[Close]

BLAST of Csor.00g012340 vs. NCBI nr
Match: KAG7036150.1 (RGG repeats nuclear RNA binding protein B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 652 bits (1682), Expect = 6.52e-235
Identity = 359/361 (99.45%), Postives = 360/361 (99.72%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60

Query: 61  EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY 120
           EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY
Sbjct: 61  EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY 120

Query: 121 GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS 180
           GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS
Sbjct: 121 GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS 180

Query: 181 PDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES 240
           PDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES
Sbjct: 181 PDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES 240

Query: 241 RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI 300
           RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI
Sbjct: 241 RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI 300

Query: 301 TEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSA 360
           TEFLKPAKGE+YYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFP LSA
Sbjct: 301 TEFLKPAKGERYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPLLSA 360

[Close]

BLAST of Csor.00g012340 vs. NCBI nr
Match: XP_022995186.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita maxima])

HSP 1 Score: 650 bits (1678), Expect = 2.65e-234
Identity = 358/361 (99.17%), Postives = 361/361 (100.00%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60
           MATMNPF+LLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR
Sbjct: 1   MATMNPFNLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60

Query: 61  EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY 120
           EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY
Sbjct: 61  EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY 120

Query: 121 GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS 180
           GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS
Sbjct: 121 GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS 180

Query: 181 PDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES 240
           PDVEEPVAENEKIIASEQQLGEDGDVN+NNKEEAVKEPEEKEPEDKEMTLKEYEKLREES
Sbjct: 181 PDVEEPVAENEKIIASEQQLGEDGDVNNNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES 240

Query: 241 RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI 300
           RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI
Sbjct: 241 RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI 300

Query: 301 TEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSA 360
           TEFLKPAKGE+YYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSA
Sbjct: 301 TEFLKPAKGERYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSA 360

[Close]

BLAST of Csor.00g012340 vs. NCBI nr
Match: XP_023521386.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 649 bits (1673), Expect = 1.53e-233
Identity = 356/361 (98.61%), Postives = 360/361 (99.72%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQLASAQRSAP PPSKKAPAPAQPAKAAKLPSKPLPPAQAVR
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPVPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60

Query: 61  EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY 120
           EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGG+NGFSDRYQPTE+GEKEAEKRGY
Sbjct: 61  EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGRNGFSDRYQPTEDGEKEAEKRGY 120

Query: 121 GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS 180
           GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS
Sbjct: 121 GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS 180

Query: 181 PDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES 240
           PDVEEPVAENEKIIASEQQLGEDGDVND+NKEEAVKEPEEKEPEDKEMTLKEYEKLREES
Sbjct: 181 PDVEEPVAENEKIIASEQQLGEDGDVNDSNKEEAVKEPEEKEPEDKEMTLKEYEKLREES 240

Query: 241 RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI 300
           RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI
Sbjct: 241 RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI 300

Query: 301 TEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSA 360
           TEFLKPAKGE+YYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSA
Sbjct: 301 TEFLKPAKGERYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSA 360

[Close]

BLAST of Csor.00g012340 vs. NCBI nr
Match: XP_022958346.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita moschata])

HSP 1 Score: 644 bits (1661), Expect = 1.03e-231
Identity = 356/361 (98.61%), Postives = 359/361 (99.45%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60

Query: 61  EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY 120
           EAKNENSRGRGGGRGYGRGRGGGG FNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY
Sbjct: 61  EAKNENSRGRGGGRGYGRGRGGGGVFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY 120

Query: 121 GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS 180
           GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS
Sbjct: 121 GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS 180

Query: 181 PDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES 240
           PDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES
Sbjct: 181 PDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES 240

Query: 241 RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI 300
           RKLLAKTELRKAEIDEELENMQQISSKK+NDEIFAKLGADKDKRKDNADKEEKAKKSVTI
Sbjct: 241 RKLLAKTELRKAEIDEELENMQQISSKKSNDEIFAKLGADKDKRKDNADKEEKAKKSVTI 300

Query: 301 TEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSA 360
           TEFLKPAKGE+YYSPGGRGRGRGRGSRGGLNNGNGG+ SNRMNVAAPSIEDPGQFPSLSA
Sbjct: 301 TEFLKPAKGERYYSPGGRGRGRGRGSRGGLNNGNGGSVSNRMNVAAPSIEDPGQFPSLSA 360

[Close]

BLAST of Csor.00g012340 vs. ExPASy TrEMBL
Match: A0A6J1K1A6 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LOC111490806 PE=4 SV=1)

HSP 1 Score: 650 bits (1678), Expect = 1.28e-234
Identity = 358/361 (99.17%), Postives = 361/361 (100.00%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60
           MATMNPF+LLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR
Sbjct: 1   MATMNPFNLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60

Query: 61  EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY 120
           EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY
Sbjct: 61  EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY 120

Query: 121 GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS 180
           GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS
Sbjct: 121 GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS 180

Query: 181 PDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES 240
           PDVEEPVAENEKIIASEQQLGEDGDVN+NNKEEAVKEPEEKEPEDKEMTLKEYEKLREES
Sbjct: 181 PDVEEPVAENEKIIASEQQLGEDGDVNNNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES 240

Query: 241 RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI 300
           RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI
Sbjct: 241 RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI 300

Query: 301 TEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSA 360
           TEFLKPAKGE+YYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSA
Sbjct: 301 TEFLKPAKGERYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSA 360

[Close]

BLAST of Csor.00g012340 vs. ExPASy TrEMBL
Match: A0A6J1H1U3 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=LOC111459594 PE=4 SV=1)

HSP 1 Score: 644 bits (1661), Expect = 5.00e-232
Identity = 356/361 (98.61%), Postives = 359/361 (99.45%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60

Query: 61  EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY 120
           EAKNENSRGRGGGRGYGRGRGGGG FNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY
Sbjct: 61  EAKNENSRGRGGGRGYGRGRGGGGVFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRGY 120

Query: 121 GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS 180
           GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS
Sbjct: 121 GASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEIS 180

Query: 181 PDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES 240
           PDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES
Sbjct: 181 PDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREES 240

Query: 241 RKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTI 300
           RKLLAKTELRKAEIDEELENMQQISSKK+NDEIFAKLGADKDKRKDNADKEEKAKKSVTI
Sbjct: 241 RKLLAKTELRKAEIDEELENMQQISSKKSNDEIFAKLGADKDKRKDNADKEEKAKKSVTI 300

Query: 301 TEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSA 360
           TEFLKPAKGE+YYSPGGRGRGRGRGSRGGLNNGNGG+ SNRMNVAAPSIEDPGQFPSLSA
Sbjct: 301 TEFLKPAKGERYYSPGGRGRGRGRGSRGGLNNGNGGSVSNRMNVAAPSIEDPGQFPSLSA 360

[Close]

BLAST of Csor.00g012340 vs. ExPASy TrEMBL
Match: A0A0A0LKF6 (HABP4_PAI-RBP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G914560 PE=4 SV=1)

HSP 1 Score: 563 bits (1451), Expect = 4.32e-200
Identity = 317/363 (87.33%), Postives = 337/363 (92.84%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQLASA RSAP  PSKKAPAPAQPAK AKLPSKPLPPAQAVR
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAHRSAPVLPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60

Query: 61  EAKNENSRG-RGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRYQPTEEGEKEAEKRG 120
           E+KN+N RG RGGGRG+GRGRGGGGGFNRDSANNENGG+NGFSDRYQ  E+GEK AE+RG
Sbjct: 61  ESKNDNGRGGRGGGRGFGRGRGGGGGFNRDSANNENGGRNGFSDRYQTPEDGEKAAERRG 120

Query: 121 YGASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEI 180
           YGA  GSFRGPRR GFSNGE EEGERPRR+YERRSGTGRGNE+KR+GAGRRNWGAPG+E 
Sbjct: 121 YGAPRGSFRGPRRAGFSNGEAEEGERPRRVYERRSGTGRGNEFKREGAGRRNWGAPGDEN 180

Query: 181 SPDVEEPVAENEKIIASEQQLGEDGDVNDNNK-EEAVKEPEEKEPEDKEMTLKEYEKLRE 240
           +PDVEEPVAENEK +A EQQLGEDG V+DNNK EEAVKEPEEKEPEDKEMTLKEYEKLRE
Sbjct: 181 APDVEEPVAENEKNVAPEQQLGEDGVVDDNNKTEEAVKEPEEKEPEDKEMTLKEYEKLRE 240

Query: 241 ESRKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSV 300
           ESRKLLAKTE+RKAE+DEELENMQQ+SSKKTNDEIFAKLG DKDKRKD ADKEE+AKKSV
Sbjct: 241 ESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDAADKEERAKKSV 300

Query: 301 TITEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSL 360
           TITEFLKPA+GE+YY+PGGRGRGRGRGSRGG NNG     SNRMNVAAPSIEDPGQFPSL
Sbjct: 301 TITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNG-----SNRMNVAAPSIEDPGQFPSL 358

[Close]

BLAST of Csor.00g012340 vs. ExPASy TrEMBL
Match: A0A1S3CPW2 (plasminogen activator inhibitor 1 RNA-binding protein-like OS=Cucumis melo OX=3656 GN=LOC103503456 PE=4 SV=1)

HSP 1 Score: 563 bits (1450), Expect = 6.14e-200
Identity = 322/364 (88.46%), Postives = 340/364 (93.41%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60
           MATMNPFDLLVDDDNEDPNQLASAQRSAPA PSKKAPAPAQPAK AKLPSKPLPPAQAVR
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPALPSKKAPAPAQPAKPAKLPSKPLPPAQAVR 60

Query: 61  EAKNENSRG-RGGGRGYGRGRGGGGG-FNRDSANNENGGKNGFSDRYQPTEEGEKEAEKR 120
           E+KNENSRG RGGGRG+GRGRGGGGG FNRDSANNEN G+NGFSDRYQ  E+GEK AE+R
Sbjct: 61  ESKNENSRGGRGGGRGFGRGRGGGGGGFNRDSANNENSGRNGFSDRYQTPEDGEKAAERR 120

Query: 121 GYGASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEE 180
           GYGA  GSFRGPRRGGFSNGE EEGERPRR+YERRSGTGRGNE+KRDGAGRRNWGAPG+E
Sbjct: 121 GYGAPRGSFRGPRRGGFSNGEAEEGERPRRVYERRSGTGRGNEFKRDGAGRRNWGAPGDE 180

Query: 181 ISPDVEEPVAENEKIIASEQQLGEDGDVNDNNK-EEAVKEPEEKEPEDKEMTLKEYEKLR 240
            +PDVEEPVAENEK +A EQQLGEDG V+DNNK EEAVKEPEEKEPEDKEMTLKEYEKLR
Sbjct: 181 NAPDVEEPVAENEKNVAPEQQLGEDG-VDDNNKAEEAVKEPEEKEPEDKEMTLKEYEKLR 240

Query: 241 EESRKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKS 300
           EESRKLLAKTE+RKAE+DEELENMQQ+SSKKTNDEIFAKLG DKDKRKD ADKEE+AKKS
Sbjct: 241 EESRKLLAKTEVRKAEVDEELENMQQLSSKKTNDEIFAKLGTDKDKRKDVADKEERAKKS 300

Query: 301 VTITEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPS 360
           VTITEFLKPA+GE+YY+PGGRGRGRGRGSRGG NNG     SNRMNVAAPSIEDPGQFPS
Sbjct: 301 VTITEFLKPAEGERYYNPGGRGRGRGRGSRGGFNNG-----SNRMNVAAPSIEDPGQFPS 358

[Close]

BLAST of Csor.00g012340 vs. ExPASy TrEMBL
Match: A0A6J1E459 (RGG repeats nuclear RNA binding protein A-like OS=Momordica charantia OX=3673 GN=LOC111025910 PE=4 SV=1)

HSP 1 Score: 548 bits (1411), Expect = 5.50e-194
Identity = 314/366 (85.79%), Postives = 336/366 (91.80%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAK-AAKLPSKPLPPAQAV 60
           MATMNPFDLLVDDDNEDPNQLASAQRSAP+PPSKKAPA AQPAK AAKLPSKPLPPAQAV
Sbjct: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPSPPSKKAPALAQPAKPAAKLPSKPLPPAQAV 60

Query: 61  REAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNEN---GGKNGFSDRYQPTEEGEKEAE 120
           REA+NENSRGRGGGRG+GRGRGGGGGFNRDSANNE+   GGKNGFSDRY P EEGEK  E
Sbjct: 61  REARNENSRGRGGGRGFGRGRGGGGGFNRDSANNESNAPGGKNGFSDRYLPPEEGEK-GE 120

Query: 121 KRGYGASYGSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPG 180
           KRGYG   GSFRGPRRGGFSNGE EEGE PRR+++RRSGTGRGNE+KRDG GRRNWGAPG
Sbjct: 121 KRGYGGPRGSFRGPRRGGFSNGEAEEGEHPRRMFDRRSGTGRGNEFKRDGGGRRNWGAPG 180

Query: 181 EEISPDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKL 240
           +EI+PDVEEPVAENEK +A EQQLGED  VND NKE+A KEPEEKEPEDKEMTLKEYEKL
Sbjct: 181 DEIAPDVEEPVAENEKNVAPEQQLGEDV-VNDENKEDAAKEPEEKEPEDKEMTLKEYEKL 240

Query: 241 REESRKLLAKTELRKAEIDEELENMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKK 300
           REE+RKLLAKTE+RKAE+DEELENMQQ+S KK+NDEIFAKLG DKDKRKDNADKEEKAKK
Sbjct: 241 REENRKLLAKTEVRKAEVDEELENMQQLSCKKSNDEIFAKLGGDKDKRKDNADKEEKAKK 300

Query: 301 SVTITEFLKPAKGEKYYSPGGRGRGRGRG-SRGGLNNGNGGNGSNRMNVAAPSIEDPGQF 360
           SVTITEFLKPA+GE+YY+PGGRGRGRGRG SRGG NNG     SNR+NV+APSIEDPGQF
Sbjct: 301 SVTITEFLKPAEGERYYNPGGRGRGRGRGGSRGGFNNG-----SNRINVSAPSIEDPGQF 359

[Close]

BLAST of Csor.00g012340 vs. TAIR 10
Match: AT4G16830.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 259.6 bits (662), Expect = 3.7e-69
Identity = 203/376 (53.99%), Postives = 248/376 (65.96%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAA-KLPSKPLPPAQAV 60
           MAT+NPFDLL DDD EDP+QLA A         K     + PAK+A KLPSKPLPPAQAV
Sbjct: 1   MATLNPFDLL-DDDAEDPSQLAVAIEKID-KSKKSGQVSSLPAKSAPKLPSKPLPPAQAV 60

Query: 61  REAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRY-QPTEEGE---KEA 120
           REA+++  RG GG  G+ RGR   GG+NRD       G NG+S  Y +P+ EG+      
Sbjct: 61  REARSDAPRGGGGRGGFNRGR---GGYNRDD------GNNGYSGGYTKPSGEGDVSKSSY 120

Query: 121 EKR-GYGASYGSFRGP-------RRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGA 180
           E+R G GA  GSFRG        RRGGFSN E  +GERPRR +ERRSGTGRG+++KRDG+
Sbjct: 121 ERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRDGS 180

Query: 181 GRRNWGAPGEEISPDVEEPV-AENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDK 240
           GR NWG PGEEI+ + E     E EK +  +  +  D    D NKE+ V   EEKEPEDK
Sbjct: 181 GRGNWGTPGEEIAAETEAVAGVETEKDVGEKPAV--DDVAADANKEDTV--VEEKEPEDK 240

Query: 241 EMTLKEYEKLREESRKLLAKTELRKAEIDEEL-ENMQQISSKKTNDEIFAKLGADKDKRK 300
           EMTL EYEK+ EE +K L      + ++D ++ E+MQQ+S+KK+NDEIF KLG+DKDKRK
Sbjct: 241 EMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKDKRK 300

Query: 301 DNADKEEKAKKSVTITEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNVA 360
           D  DKEEKAKK+V+I EFLKPA+G  YY  G  GRGRG   RGG+++G  G   N    A
Sbjct: 301 D--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYRNE---A 355

Query: 361 APSIEDPGQFPSLSAK 362
           AP+I D  QFPSL  K
Sbjct: 361 APAIGDAAQFPSLGGK 355

[Close]

BLAST of Csor.00g012340 vs. TAIR 10
Match: AT5G47210.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 225.3 bits (573), Expect = 7.7e-59
Identity = 186/371 (50.13%), Postives = 239/371 (64.42%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60
           MA++NPFDLL  DD EDP+QLA A     +   +KA A  QP KAAK P+KP PP+QAVR
Sbjct: 1   MASLNPFDLL-GDDAEDPSQLAVAL----SQKVEKAAAAVQPPKAAKFPTKPAPPSQAVR 60

Query: 61  EAKNENSRGRG--GGR-GYGRGRGGGGGFNRDSANNE-NGGKNGFSDRYQPTEEGEKEAE 120
           E++N    GRG  GGR G+ RGR G GG+NRD+ NN+  G +NGFS  Y+   E    A 
Sbjct: 61  ESRNAPQGGRGGTGGRGGFSRGR-GNGGYNRDNRNNDAPGNENGFSGGYRRPSEDADGAS 120

Query: 121 KRGYGASY---GSFRGPRRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWG 180
           + G    Y   G   GPRRGG +NGE+ + ERP R Y+R S TG G   KR+G GR NWG
Sbjct: 121 RGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRGNWG 180

Query: 181 APGEEISPDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPED---KEMTL 240
              ++I P  EEP  E EK   +E+Q GED +  +  KE   +E  +KE E+   +EMTL
Sbjct: 181 TTEDDIPPTSEEPTTEVEKSPVAEKQGGED-ETPEAKKELTAEEKAQKEAEEAEAREMTL 240

Query: 241 KEYEKLREESRKLLAKTELRKAEIDEEL-ENMQQISSKK-TNDEIFAKLGADKDKRKDNA 300
           +EYEK+ EE +K L  T++ + ++D ++ E+MQQ+S+KK T++EIF KLG+DK+KRK   
Sbjct: 241 EEYEKILEEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRK--- 300

Query: 301 DKEEKAKKSVTITEFLKPAKGEKYYSPGGRGRG-RGRGSRGGLNNGNGGNGSNRMNVAAP 359
           D  EKAKKS++I EFLKPA G++Y    GRG G RGRG RGG   G GGN       AAP
Sbjct: 301 DATEKAKKSLSINEFLKPADGKRY---NGRGGGSRGRGGRGG--RGEGGNQRYAKEAAAP 356

[Close]

BLAST of Csor.00g012340 vs. TAIR 10
Match: AT4G17520.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 224.9 bits (572), Expect = 1.0e-58
Identity = 178/374 (47.59%), Postives = 234/374 (62.57%), Query Frame = 0


Query: 1   MATMNPFDLLVDDDNEDPNQLASAQRSAPAPPSKKAPAPAQPAKAAKLPSKPLPPAQAVR 60
           MA++NPFDLL DDD EDP+Q+ +++         K  AP Q AK+ K+P+KP PP+QAVR
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVASK-------PLKVVAPVQTAKSGKMPTKPPPPSQAVR 60

Query: 61  EAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNEN-GGKNGFSDRYQPTEEGEKEAEKRG 120
           EA+N    GRG GRG   GRGG GG NRDS NN+    +NG+   Y+ +EEG+       
Sbjct: 61  EARNAPGGGRGAGRGGSYGRGGRGGNNRDSRNNDGPANENGYGGGYRRSEEGDGARR--- 120

Query: 121 YGASYGSFRGPRRGGFSN-GETEEGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEE 180
            G   G +RG RRG +SN G++ + ERPR+ Y+R S T  GNE KRDGAGR NWG   ++
Sbjct: 121 -GGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQDD 180

Query: 181 ISPDVEEPVAENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLRE 240
           I+P  EE  A  +K +  E+Q GE G+  D   E   ++ EEK PEDKEMTL+EYEK+ E
Sbjct: 181 ITPVTEESTAVVDKNLTVEKQDGE-GEATDAKNETPAEKAEEK-PEDKEMTLEEYEKVLE 240

Query: 241 ESRKLLAKTELRKAEID-EELENMQQISSKKT-NDEIFAKLGADKDKRKDNADKEEKAKK 300
           E +K L  T++ + ++D +  E MQQ+SSKK+ NDE+F KLG +KDKR    ++EEK +K
Sbjct: 241 EKKKALQATKVEERKVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKR--ITEREEKTRK 300

Query: 301 SVTITEFLKPAKGEKYYSPGG--RGRGRGRGSR------GGLNNGNGGNGSNRMNVAA-- 359
           S++I EFLKPA G+ YY P G  +G   GRG R      GG N   GG        AA  
Sbjct: 301 SLSINEFLKPADGKSYYRPRGGYQGGREGRGPREGNQRDGGRNLREGGRNQRDGGAAAQA 358

[Close]

BLAST of Csor.00g012340 vs. TAIR 10
Match: AT4G16830.3 (Hyaluronan / mRNA binding family )

HSP 1 Score: 217.2 bits (552), Expect = 2.1e-56
Identity = 167/317 (52.68%), Postives = 208/317 (65.62%), Query Frame = 0


Query: 59  VREAKNENSRGRGGGRGYGRGRGGGGGFNRDSANNENGGKNGFSDRY-QPTEEGE---KE 118
           VREA+++  RG GG  G+ RGR   GG+NRD       G NG+S  Y +P+ EG+     
Sbjct: 48  VREARSDAPRGGGGRGGFNRGR---GGYNRDD------GNNGYSGGYTKPSGEGDVSKSS 107

Query: 119 AEKR-GYGASYGSFRGP-------RRGGFSNGETEEGERPRRLYERRSGTGRGNEYKRDG 178
            E+R G GA  GSFRG        RRGGFSN E  +GERPRR +ERRSGTGRG+++KRDG
Sbjct: 108 YERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGSDFKRDG 167

Query: 179 AGRRNWGAPGEEISPDVEEPV-AENEKIIASEQQLGEDGDVNDNNKEEAVKEPEEKEPED 238
           +GR NWG PGEEI+ + E     E EK +  +  +  D    D NKE+ V   EEKEPED
Sbjct: 168 SGRGNWGTPGEEIAAETEAVAGVETEKDVGEKPAV--DDVAADANKEDTV--VEEKEPED 227

Query: 239 KEMTLKEYEKLREESRKLLAKTELRKAEIDEEL-ENMQQISSKKTNDEIFAKLGADKDKR 298
           KEMTL EYEK+ EE +K L      + ++D ++ E+MQQ+S+KK+NDEIF KLG+DKDKR
Sbjct: 228 KEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFESMQQLSNKKSNDEIFIKLGSDKDKR 287

Query: 299 KDNADKEEKAKKSVTITEFLKPAKGEKYYSPGGRGRGRGRGSRGGLNNGNGGNGSNRMNV 358
           KD  DKEEKAKK+V+I EFLKPA+G  YY  G  GRGRG   RGG+++G  G   N    
Sbjct: 288 KD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGGRGRGGRGRGGVSSGESGGYRNE--- 345

Query: 359 AAPSIEDPGQFPSLSAK 362
           AAP+I D  QFPSL  K
Sbjct: 348 AAPAIGDAAQFPSLGGK 345

[Close]

BLAST of Csor.00g012340 vs. TAIR 10
Match: AT4G16830.2 (Hyaluronan / mRNA binding family )

HSP 1 Score: 184.9 bits (468), Expect = 1.2e-46
Identity = 124/222 (55.86%), Postives = 155/222 (69.82%), Query Frame = 0


Query: 142 EGERPRRLYERRSGTGRGNEYKRDGAGRRNWGAPGEEISPDVEEPV-AENEKIIASEQQL 201
           +GERPRR +ERRSGTGRG+++KRDG+GR NWG PGEEI+ + E     E EK +  +  +
Sbjct: 53  DGERPRRAFERRSGTGRGSDFKRDGSGRGNWGTPGEEIAAETEAVAGVETEKDVGEKPAV 112

Query: 202 GEDGDVNDNNKEEAVKEPEEKEPEDKEMTLKEYEKLREESRKLLAKTELRKAEIDEEL-E 261
             D    D NKE+ V   EEKEPEDKEMTL EYEK+ EE +K L      + ++D ++ E
Sbjct: 113 --DDVAADANKEDTV--VEEKEPEDKEMTLDEYEKILEEKKKALQSLTTSERKVDTKVFE 172

Query: 262 NMQQISSKKTNDEIFAKLGADKDKRKDNADKEEKAKKSVTITEFLKPAKGEKYYSPGGRG 321
           +MQQ+S+KK+NDEIF KLG+DKDKRKD  DKEEKAKK+V+I EFLKPA+G  YY  G  G
Sbjct: 173 SMQQLSNKKSNDEIFIKLGSDKDKRKD--DKEEKAKKAVSINEFLKPAEGGNYYRGGRGG 232

Query: 322 RGRGRGSRGGLNNGNGGNGSNRMNVAAPSIEDPGQFPSLSAK 362
           RGRG   RGG+++G  G   N    AAP+I D  QFPSL  K
Sbjct: 233 RGRGGRGRGGVSSGESGGYRNE---AAPAIGDAAQFPSLGGK 265

The following BLAST results are available for this feature:

BLAST of Csor.00g012340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23523	5.2e-68	53.99	RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]
Q9SQ56	3.7e-66	57.70	RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=409...	[more]
Q9LVT8	1.1e-57	50.13	RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]
O23593	1.4e-57	47.59	RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]

BLAST of Csor.00g012340 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606205.1	2.77e-236	100.00	RGG repeats nuclear RNA binding protein B, partial [Cucurbita argyrosperma subsp...	[more]
KAG7036150.1	6.52e-235	99.45	RGG repeats nuclear RNA binding protein B [Cucurbita argyrosperma subsp. argyros...	[more]
XP_022995186.1	2.65e-234	99.17	RGG repeats nuclear RNA binding protein A-like [Cucurbita maxima]	[more]
XP_023521386.1	1.53e-233	98.61	RGG repeats nuclear RNA binding protein A-like [Cucurbita pepo subsp. pepo]	[more]
XP_022958346.1	1.03e-231	98.61	RGG repeats nuclear RNA binding protein A-like [Cucurbita moschata]	[more]

BLAST of Csor.00g012340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K1A6	1.28e-234	99.17	RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1H1U3	5.00e-232	98.61	RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A0A0LKF6	4.32e-200	87.33	HABP4_PAI-RBP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G914...	[more]
A0A1S3CPW2	6.14e-200	88.46	plasminogen activator inhibitor 1 RNA-binding protein-like OS=Cucumis melo OX=36...	[more]
A0A6J1E459	5.50e-194	85.79	RGG repeats nuclear RNA binding protein A-like OS=Momordica charantia OX=3673 GN...	[more]

BLAST of Csor.00g012340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16830.1	3.7e-69	53.99	Hyaluronan / mRNA binding family	[more]
AT5G47210.1	7.7e-59	50.13	Hyaluronan / mRNA binding family	[more]
AT4G17520.1	1.0e-58	47.59	Hyaluronan / mRNA binding family	[more]
AT4G16830.3	2.1e-56	52.68	Hyaluronan / mRNA binding family	[more]
AT4G16830.2	1.2e-46	55.86	Hyaluronan / mRNA binding family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 226..264
None	No IPR available	GENE3D	6.10.140.1040		coord: 143..256 e-value: 9.8E-8 score: 34.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..361
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..119
None	No IPR available	PANTHER	PTHR12299:SF64	PLASMINOGEN ACTIVATOR INHIBITOR 1 RNA-BINDING PROTEIN-LIKE	coord: 1..361
IPR006861	Hyaluronan/mRNA-binding protein	SMART	SM01233	HABP4_PAI_RBP1_2	coord: 146..255 e-value: 2.5E-32 score: 123.4
IPR006861	Hyaluronan/mRNA-binding protein	PFAM	PF04774	HABP4_PAI-RBP1	coord: 146..253 e-value: 7.5E-23 score: 81.6
IPR019084	Stm1-like, N-terminal	PFAM	PF09598	Stm1_N	coord: 1..73 e-value: 4.1E-22 score: 78.8
IPR039764	RNA binding protein HABP4/SERBP1	PANTHER	PTHR12299	HYALURONIC ACID-BINDING PROTEIN 4	coord: 1..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g012340.m01	Csor.00g012340.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding