
Csor.00g007630 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAAGCTGCGAAACCACTTCTTCTTCTTCTCCTCCTTCTAGCCCTAATTCTCTGCTCTCTCTGCTCAACAATGGCGCTAAAAGGTTTCTCTCTCTCTTTTTCTCTCTCTCGGTCTACGTTCTTCGTCGCTTGATTTACTTTATTCATCTTCTCTCCGTATCTTTTTTTCGCGTTCAGGACGATTCTCAACAGAGGACGAACTTTTCGCTAAACCTCTGCCTCAATTCCGTTCCGTACAAACAACAATCGCGCCCGAGGTTAGTTGTTCGTACTATCCGGACGATAAATCTTTTTCGATTTTTATCATTTAGGAATTCGCGTCTCGTTTCTTGATCTCTGTTTCGCGTTTCTGATCTCTTGAATGTACTTTTAAAGTAATCGTTAAATGCTCGAGACTCGAAGTATAATGTGTTTATTTTTTATGGAAATTTTAAAAAATTCAGATGAGAAATTCGAGAAGGTTGATGATTGGTTCAACAGCACCGATATGTACTTATAATGAATGTAGAGGATGCAAATACAAGTGCAGAGCCGAGCAAGTGCCAGTTGAAGGCAATGACCCGATCAATAGTGCTTATCACTATAGATGTGTTTGTCATAGGTAA ATGGCGAAAGCTGCGAAACCACTTCTTCTTCTTCTCCTCCTTCTAGCCCTAATTCTCTGCTCTCTCTGCTCAACAATGGCGCTAAAAGGACGATTCTCAACAGAGGACGAACTTTTCGCTAAACCTCTGCCTCAATTCCGTTCCGTACAAACAACAATCGCGCCCGAGATGAGAAATTCGAGAAGGTTGATGATTGGTTCAACAGCACCGATATGTACTTATAATGAATGTAGAGGATGCAAATACAAGTGCAGAGCCGAGCAAGTGCCAGTTGAAGGCAATGACCCGATCAATAGTGCTTATCACTATAGATGTGTTTGTCATAGGTAA ATGGCGAAAGCTGCGAAACCACTTCTTCTTCTTCTCCTCCTTCTAGCCCTAATTCTCTGCTCTCTCTGCTCAACAATGGCGCTAAAAGGACGATTCTCAACAGAGGACGAACTTTTCGCTAAACCTCTGCCTCAATTCCGTTCCGTACAAACAACAATCGCGCCCGAGATGAGAAATTCGAGAAGGTTGATGATTGGTTCAACAGCACCGATATGTACTTATAATGAATGTAGAGGATGCAAATACAAGTGCAGAGCCGAGCAAGTGCCAGTTGAAGGCAATGACCCGATCAATAGTGCTTATCACTATAGATGTGTTTGTCATAGGTAA MAKAAKPLLLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIAPEMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR Homology
BLAST of Csor.00g007630 vs. ExPASy Swiss-Prot
Match: Q9SV72 (EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=EPFL9 PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 4.1e-24 Identity = 50/68 (73.53%), Postives = 58/68 (85.29%), Query Frame = 0
BLAST of Csor.00g007630 vs. NCBI nr
Match: KAG6593029.1 (EPIDERMAL PATTERNING FACTOR-like protein 9, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 218 bits (555), Expect = 1.88e-71 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Csor.00g007630 vs. NCBI nr
Match: XP_022959844.1 (EPIDERMAL PATTERNING FACTOR-like protein 9 [Cucurbita moschata]) HSP 1 Score: 213 bits (543), Expect = 1.31e-69 Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0
BLAST of Csor.00g007630 vs. NCBI nr
Match: XP_023514879.1 (EPIDERMAL PATTERNING FACTOR-like protein 9 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 213 bits (541), Expect = 2.49e-69 Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0
BLAST of Csor.00g007630 vs. NCBI nr
Match: XP_023004190.1 (EPIDERMAL PATTERNING FACTOR-like protein 9 [Cucurbita maxima]) HSP 1 Score: 207 bits (527), Expect = 3.40e-67 Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Csor.00g007630 vs. NCBI nr
Match: XP_038899071.1 (EPIDERMAL PATTERNING FACTOR-like protein 9 [Benincasa hispida]) HSP 1 Score: 151 bits (381), Expect = 6.02e-45 Identity = 85/114 (74.56%), Postives = 91/114 (79.82%), Query Frame = 0
BLAST of Csor.00g007630 vs. ExPASy TrEMBL
Match: A0A6J1H996 (EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111460784 PE=4 SV=1) HSP 1 Score: 213 bits (543), Expect = 6.36e-70 Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0
BLAST of Csor.00g007630 vs. ExPASy TrEMBL
Match: A0A6J1KTW3 (EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Cucurbita maxima OX=3661 GN=LOC111497591 PE=4 SV=1) HSP 1 Score: 207 bits (527), Expect = 1.65e-67 Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Csor.00g007630 vs. ExPASy TrEMBL
Match: A0A6J1DR94 (uncharacterized protein LOC111023601 OS=Momordica charantia OX=3673 GN=LOC111023601 PE=4 SV=1) HSP 1 Score: 132 bits (333), Expect = 7.38e-38 Identity = 80/117 (68.38%), Postives = 87/117 (74.36%), Query Frame = 0
BLAST of Csor.00g007630 vs. ExPASy TrEMBL
Match: A0A0A0KA17 (EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Cucumis sativus OX=3659 GN=Csa_7G368090 PE=4 SV=1) HSP 1 Score: 129 bits (323), Expect = 1.04e-36 Identity = 64/90 (71.11%), Postives = 71/90 (78.89%), Query Frame = 0
BLAST of Csor.00g007630 vs. ExPASy TrEMBL
Match: A0A445BNH1 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A09g045950 PE=4 SV=1) HSP 1 Score: 119 bits (298), Expect = 1.27e-32 Identity = 65/107 (60.75%), Postives = 73/107 (68.22%), Query Frame = 0
BLAST of Csor.00g007630 vs. TAIR 10
Match: AT4G12970.1 (stomagen ) HSP 1 Score: 112.1 bits (279), Expect = 2.9e-25 Identity = 50/68 (73.53%), Postives = 58/68 (85.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|