Csor.00g006290 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCGATTAAAGCCCTACTTTCCATTGCTCTTATCGCTCTTCTCTTGTTCTTCGAATCCCTTCCAACTTCCGCCGCCGTTCACCGCGGGGCTTCCACTTCTCTTGCTGGAATACTTCGCCGGAACATCGTACAGACGACGGCGGATCATCATCAAGTTGCAGAGAAGAAGTTCAACGTTCATATCAAAAGGAGGATGCGGATGCGACCTGTGCTAATTGGCCGCCCTAAGACATCGGCGGCGAATCGGAGCCGAGAAGCGTTCTGTGGCGTTGGATCTATGCTGTGTATCTTCGTTCTTTTGGGATTGTTCTTGTAA ATGGCAGCGATTAAAGCCCTACTTTCCATTGCTCTTATCGCTCTTCTCTTGTTCTTCGAATCCCTTCCAACTTCCGCCGCCGTTCACCGCGGGGCTTCCACTTCTCTTGCTGGAATACTTCGCCGGAACATCGTACAGACGACGGCGGATCATCATCAAGTTGCAGAGAAGAAGTTCAACGTTCATATCAAAAGGAGGATGCGGATGCGACCTGTGCTAATTGGCCGCCCTAAGACATCGGCGGCGAATCGGAGCCGAGAAGCGTTCTGTGGCGTTGGATCTATGCTGTGTATCTTCGTTCTTTTGGGATTGTTCTTGTAA ATGGCAGCGATTAAAGCCCTACTTTCCATTGCTCTTATCGCTCTTCTCTTGTTCTTCGAATCCCTTCCAACTTCCGCCGCCGTTCACCGCGGGGCTTCCACTTCTCTTGCTGGAATACTTCGCCGGAACATCGTACAGACGACGGCGGATCATCATCAAGTTGCAGAGAAGAAGTTCAACGTTCATATCAAAAGGAGGATGCGGATGCGACCTGTGCTAATTGGCCGCCCTAAGACATCGGCGGCGAATCGGAGCCGAGAAGCGTTCTGTGGCGTTGGATCTATGCTGTGTATCTTCGTTCTTTTGGGATTGTTCTTGTAA MAAIKALLSIALIALLLFFESLPTSAAVHRGASTSLAGILRRNIVQTTADHHQVAEKKFNVHIKRRMRMRPVLIGRPKTSAANRSREAFCGVGSMLCIFVLLGLFL Homology
BLAST of Csor.00g006290 vs. NCBI nr
Match: KAG6593163.1 (hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 197 bits (500), Expect = 3.70e-63 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of Csor.00g006290 vs. NCBI nr
Match: KAG7025561.1 (E3 ubiquitin-protein ligase MIEL1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 160 bits (406), Expect = 2.43e-45 Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0
BLAST of Csor.00g006290 vs. NCBI nr
Match: KAG6575859.1 (hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014393.1 hypothetical protein SDJN02_24570, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 94.0 bits (232), Expect = 2.43e-22 Identity = 66/114 (57.89%), Postives = 80/114 (70.18%), Query Frame = 0
BLAST of Csor.00g006290 vs. NCBI nr
Match: KAA0068047.1 (protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no-on-transient A-like [Cucumis melo var. makuwa]) HSP 1 Score: 79.0 bits (193), Expect = 2.14e-16 Identity = 55/102 (53.92%), Postives = 68/102 (66.67%), Query Frame = 0
BLAST of Csor.00g006290 vs. NCBI nr
Match: XP_022992473.1 (uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima]) HSP 1 Score: 79.7 bits (195), Expect = 5.08e-16 Identity = 55/112 (49.11%), Postives = 69/112 (61.61%), Query Frame = 0
BLAST of Csor.00g006290 vs. ExPASy TrEMBL
Match: A0A5A7VLE5 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00010 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.04e-16 Identity = 55/102 (53.92%), Postives = 68/102 (66.67%), Query Frame = 0
BLAST of Csor.00g006290 vs. ExPASy TrEMBL
Match: A0A6J1JZB1 (uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.46e-16 Identity = 55/112 (49.11%), Postives = 69/112 (61.61%), Query Frame = 0
BLAST of Csor.00g006290 vs. ExPASy TrEMBL
Match: A0A0A0KAQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.63e-15 Identity = 53/104 (50.96%), Postives = 67/104 (64.42%), Query Frame = 0
BLAST of Csor.00g006290 vs. ExPASy TrEMBL
Match: A0A6J1GRX2 (uncharacterized protein LOC111456466 OS=Cucurbita moschata OX=3662 GN=LOC111456466 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 3.63e-14 Identity = 53/112 (47.32%), Postives = 68/112 (60.71%), Query Frame = 0
BLAST of Csor.00g006290 vs. ExPASy TrEMBL
Match: A0A5D3D3Y6 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001920 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 3.08e-13 Identity = 59/119 (49.58%), Postives = 71/119 (59.66%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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