Csor.00g004960 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g004960
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein TAB2 homolog, chloroplastic
Location	Csor_Chr08: 3099245 .. 3101122 (-)
RNA-Seq Expression	Csor.00g004960
Synteny	Csor.00g004960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACCTTAAGCTTCAACCCCACTAGAATAAGAACCCCAGGGGGGCTTCACCTTTGCAAACCGAAACCTAGATCGTTACCATTTCCACAGTCGATTAAAACCCCGAAAAGATTCTCAGCCGATTTCCGTATCAATCAACAACTACTACGTCGTTTTCGATCGAATTCTGTATCGGAAAGCTCGATTTCGGTGCCGGAAGAGGTGGAGGTGGCGGTGGACGAGGATGAGGATGAGGATGAGGTTGAGGATGATCCGACTTTGGAGTTGGCCTATTTGGATTCGGAGACAGATCCTGAGAGTATTACGGAGTGGGAGCTGGATTTCTGCTCGAGGCCTATTTTGGATATCAGAGGGAAGAAGGTGTGGGAGCTTGTAGCGTGTGATAATTCGCTCTCGCTTCAGTACACGAAGTATTTTCCTAACAATGTTATTAATAGCATTACTCTGAGAGATGCGATTTCTTCGATTACTGAAGAGTTGGGAGTGCCATTACCAGAGAAAATCCGCTTCTTCAGGTACATGTTCTGATTGATTAAGCTCATTTGGATGAATCTTGTGTTCATGCATTTCAACTTCAAAATGTGTCTGAATTTGTGTCACAAAAACCTATGATTGAGTAGCAATTTATTCGAGAATGGTGTCTCTGTCTTCATATGATAGAAATTTTGATGGGATTATAGGTCACAGATGCAGACAATTATTACAAAAGCATGTACCGAGCTTGGCGTAAAGCCCATTCCAAGTAAAAGGGTATATGAATTTATAGGTGTTATTTTCACTTCAGTTTCTTGGTGAAGTAGATTGGATTTAGATTATGGATTAAACTCTCTGAGATCAAGATTTTCCATTGCTCTATCAGTGTCTTTCCCTGCTTTTATGGCTGGAAGAACGATACGAGACCGTCTACACGCGTCATCCAGGTTTTCAGAAAGGGTCCAAGCCCCTCCTTGCATTAGATAATCCATTTCCAATGGAACTCCCAGACAATCTTTTCGGGGAGAGGTGGGCATTTGTTCAATTGCCCTTTTCAGGTAAACCAATAGCTTTTCTTCTTTATTTTCTGTTGACTCTAAACATGGCTGAAGAGTTGCTGCTTTACTAAAGGATGTTGCCTATTGTTCTTATAGTTTCTCCAATAATAATTTGATCCTCCATTGATTCTCAGCTGTTCAAGAGGAGGTCTCAAACTTAAATGCAAGTTTTATGTTTGGCTCCAGTCTTGATCTGGATTTACTGGGGATTGAAATTGATGACAATACAATGATCCCAGGGTTGTCTGTTGCATCTTCACGAGCTCAACCATTGGCAGGTATACCACCACTTTAAAACCAGTTGAGCTTTGGTGATTCGGAACATATATAAACAAATGATTCACAACAAATTCGTTAATCATTCTAATTTCAATTTTCTCAGTCGATTAGATTTTTCTTCCCGAAATTTTTATACACCTATCATCGTAGTATAAAATATTTCTTTACAATCATATCGTCCATCATGAAGATTTTGTAATGTAAGAAATTGAACTCTCTGTTTCATACATGTTCCCCAAACAATACTCGCAGTATGATGAGTATAAACAATCTGCCATTTGATCTCTTTTTGTATCATTCCACAGCTTGGATGAATGGAATGGAAGTATATTCAGTTGAAGCCGATACCTCTCGTGCTTGTTTGATTCTATCCGTTGGGATCTCGACTCGATATGTCTATGCTACTTATAAAAAAAATCCAGTGACAACTGCTGAGGCTGAAGCTTGGGAAGCAGCAAAAAAGGCTTGTGGAGGCTTGCATTTTCTTGCCATACAAGACGACTTGGATTCAGAGGACTGTGTTGGATTCTGGCTCCTACTAGACTTGCCACCGCCGCCAGTATAA

mRNA sequence

ATGGCGACCTTAAGCTTCAACCCCACTAGAATAAGAACCCCAGGGGGGCTTCACCTTTGCAAACCGAAACCTAGATCGTTACCATTTCCACAGTCGATTAAAACCCCGAAAAGATTCTCAGCCGATTTCCGTATCAATCAACAACTACTACGTCGTTTTCGATCGAATTCTGTATCGGAAAGCTCGATTTCGGTGCCGGAAGAGGTGGAGGTGGCGGTGGACGAGGATGAGGATGAGGATGAGGTTGAGGATGATCCGACTTTGGAGTTGGCCTATTTGGATTCGGAGACAGATCCTGAGAGTATTACGGAGTGGGAGCTGGATTTCTGCTCGAGGCCTATTTTGGATATCAGAGGGAAGAAGGTGTGGGAGCTTGTAGCGTGTGATAATTCGCTCTCGCTTCAGTACACGAAGTATTTTCCTAACAATGTTATTAATAGCATTACTCTGAGAGATGCGATTTCTTCGATTACTGAAGAGTTGGGAGTGCCATTACCAGAGAAAATCCGCTTCTTCAGGTCACAGATGCAGACAATTATTACAAAAGCATGTACCGAGCTTGGCGTAAAGCCCATTCCAAGTAAAAGGTGTCTTTCCCTGCTTTTATGGCTGGAAGAACGATACGAGACCGTCTACACGCGTCATCCAGGTTTTCAGAAAGGGTCCAAGCCCCTCCTTGCATTAGATAATCCATTTCCAATGGAACTCCCAGACAATCTTTTCGGGGAGAGGTGGGCATTTGTTCAATTGCCCTTTTCAGCTGTTCAAGAGGAGGTCTCAAACTTAAATGCAAGTTTTATGTTTGGCTCCAGTCTTGATCTGGATTTACTGGGGATTGAAATTGATGACAATACAATGATCCCAGGGTTGTCTGTTGCATCTTCACGAGCTCAACCATTGGCAGCTTGGATGAATGGAATGGAAGTATATTCAGTTGAAGCCGATACCTCTCGTGCTTGTTTGATTCTATCCGTTGGGATCTCGACTCGATATGTCTATGCTACTTATAAAAAAAATCCAGTGACAACTGCTGAGGCTGAAGCTTGGGAAGCAGCAAAAAAGGCTTGTGGAGGCTTGCATTTTCTTGCCATACAAGACGACTTGGATTCAGAGGACTGTGTTGGATTCTGGCTCCTACTAGACTTGCCACCGCCGCCAGTATAA

Coding sequence (CDS)

ATGGCGACCTTAAGCTTCAACCCCACTAGAATAAGAACCCCAGGGGGGCTTCACCTTTGCAAACCGAAACCTAGATCGTTACCATTTCCACAGTCGATTAAAACCCCGAAAAGATTCTCAGCCGATTTCCGTATCAATCAACAACTACTACGTCGTTTTCGATCGAATTCTGTATCGGAAAGCTCGATTTCGGTGCCGGAAGAGGTGGAGGTGGCGGTGGACGAGGATGAGGATGAGGATGAGGTTGAGGATGATCCGACTTTGGAGTTGGCCTATTTGGATTCGGAGACAGATCCTGAGAGTATTACGGAGTGGGAGCTGGATTTCTGCTCGAGGCCTATTTTGGATATCAGAGGGAAGAAGGTGTGGGAGCTTGTAGCGTGTGATAATTCGCTCTCGCTTCAGTACACGAAGTATTTTCCTAACAATGTTATTAATAGCATTACTCTGAGAGATGCGATTTCTTCGATTACTGAAGAGTTGGGAGTGCCATTACCAGAGAAAATCCGCTTCTTCAGGTCACAGATGCAGACAATTATTACAAAAGCATGTACCGAGCTTGGCGTAAAGCCCATTCCAAGTAAAAGGTGTCTTTCCCTGCTTTTATGGCTGGAAGAACGATACGAGACCGTCTACACGCGTCATCCAGGTTTTCAGAAAGGGTCCAAGCCCCTCCTTGCATTAGATAATCCATTTCCAATGGAACTCCCAGACAATCTTTTCGGGGAGAGGTGGGCATTTGTTCAATTGCCCTTTTCAGCTGTTCAAGAGGAGGTCTCAAACTTAAATGCAAGTTTTATGTTTGGCTCCAGTCTTGATCTGGATTTACTGGGGATTGAAATTGATGACAATACAATGATCCCAGGGTTGTCTGTTGCATCTTCACGAGCTCAACCATTGGCAGCTTGGATGAATGGAATGGAAGTATATTCAGTTGAAGCCGATACCTCTCGTGCTTGTTTGATTCTATCCGTTGGGATCTCGACTCGATATGTCTATGCTACTTATAAAAAAAATCCAGTGACAACTGCTGAGGCTGAAGCTTGGGAAGCAGCAAAAAAGGCTTGTGGAGGCTTGCATTTTCTTGCCATACAAGACGACTTGGATTCAGAGGACTGTGTTGGATTCTGGCTCCTACTAGACTTGCCACCGCCGCCAGTATAA

Protein sequence

MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTPKRFSADFRINQQLLRRFRSNSVSESSISVPEEVEVAVDEDEDEDEVEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

Homology

[Close]

BLAST of Csor.00g004960 vs. ExPASy Swiss-Prot
Match: Q9SFB3 (Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATAB2 PE=2 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 1.7e-157
Identity = 278/387 (71.83%), Postives = 326/387 (84.24%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATL FN  RI+TP    +  PKP S  F + IKT   FS++  + +    RF S S+ E
Sbjct: 1   MATLGFNTRRIQTPSLPRI--PKPSS--FTKPIKTHHLFSSETLLKR---CRFVSRSLPE 60

Query: 61  SSISVPEEVEVAVDEDEDEDEVEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120
           SS+S+ +E EVA + +      EDDPT EL+YLD E+D +SI EWELDFCSRPILD RGK
Sbjct: 61  SSLSITKEQEVANEVE------EDDPTSELSYLDPESDADSIKEWELDFCSRPILDSRGK 120

Query: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180
           K+WELV CD SLSLQ TKYFPNNVINSITL+DAI +IT++LGVPLPEKIRFFRSQMQTII
Sbjct: 121 KIWELVVCDASLSLQVTKYFPNNVINSITLKDAIVTITQDLGVPLPEKIRFFRSQMQTII 180

Query: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240
           TKAC EL +K +PSKRCLSL LWL+ERY+TVYTRHPGFQKGS PLL+LDNPFPM LP+NL
Sbjct: 181 TKACKELAIKAVPSKRCLSLFLWLQERYDTVYTRHPGFQKGSLPLLSLDNPFPMNLPENL 240

Query: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300
           FGE+WAFVQLP+SAV+EE+S+ +  F+FG+SLDLDLLGIE+D+NT+IPGLSVA+SRA+PL
Sbjct: 241 FGEKWAFVQLPYSAVREEISDFDEKFVFGASLDLDLLGIEVDENTLIPGLSVATSRAKPL 300

Query: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360
           AAWMNG+EV S+EAD+S+ CLILSVGI+TRYVYATYKK PVTT EAEAWE+AKK  GGLH
Sbjct: 301 AAWMNGLEVCSIEADSSKGCLILSVGIATRYVYATYKKTPVTTDEAEAWESAKKTSGGLH 360

Query: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 388
           FLAIQDDLDS+DCVGFWLL+DLPPPPV
Sbjct: 361 FLAIQDDLDSDDCVGFWLLIDLPPPPV 374

[Close]

BLAST of Csor.00g004960 vs. ExPASy Swiss-Prot
Match: B4FTR7 (Protein TAB2 homolog, chloroplastic OS=Zea mays OX=4577 GN=TAB2 PE=2 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 1.5e-137
Identity = 233/337 (69.14%), Postives = 286/337 (84.87%), Query Frame = 0


Query: 51  RRFRSNSVSESSISVPEEVEVAVDEDEDEDEVEDDPTLELAYLDSETDPESITEWELDFC 110
           RR RS S SESS       ++A +E E E++V  DP  E+ YLD + DPESI EWELDFC
Sbjct: 57  RRCRSIS-SESSTEASAAADIADEEVEAENKV--DPQAEVCYLDPDVDPESIREWELDFC 116

Query: 111 SRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIR 170
           SRPILD RGKKVWELV CD +LSLQ+T+YFPNN INS+TLRDA++S++E LGVP+P+++R
Sbjct: 117 SRPILDARGKKVWELVVCDATLSLQFTRYFPNNAINSVTLRDALASVSEALGVPMPDRVR 176

Query: 171 FFRSQMQTIITKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDN 230
           FFRSQMQTIIT+AC +LGVK +PS+RC+SLLLWLEERYE VY+RHPGFQ G++PLLALDN
Sbjct: 177 FFRSQMQTIITRACGDLGVKAVPSRRCVSLLLWLEERYEVVYSRHPGFQAGTRPLLALDN 236

Query: 231 PFPMELPDNLFGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGL 290
           PFP  LP+NLFG++WAFVQLPFSAV+EEV +L   + FG+ LDL+LLG E+DD T++PG+
Sbjct: 237 PFPTTLPENLFGDKWAFVQLPFSAVREEVESLERRYAFGAGLDLELLGFELDDTTLVPGV 296

Query: 291 SVASSRAQPLAAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWE 350
           +V SSRA+PLAAWMNG+E+ ++EADT RA LILS G+STRYVY+ Y+K   +T EAEAWE
Sbjct: 297 AVESSRAKPLAAWMNGLEICAMEADTGRASLILSAGVSTRYVYSGYQKTAASTQEAEAWE 356

Query: 351 AAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV 388
           AAKKACGGLHFLAIQ++L+S+ CVGFWLLLDLPPPPV
Sbjct: 357 AAKKACGGLHFLAIQENLNSDGCVGFWLLLDLPPPPV 390

[Close]

BLAST of Csor.00g004960 vs. ExPASy Swiss-Prot
Match: Q6K9C1 (Protein TAB2 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0610800 PE=2 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 4.8e-136
Identity = 235/341 (68.91%), Postives = 279/341 (81.82%), Query Frame = 0


Query: 51  RRFRSNSVSESSISVPEEVEVAVDEDE----DEDEVEDDPTLELAYLDSETDPESITEWE 110
           R  R  SVS  S S     + A DE+E    D +E E DP  E+ YLD E D E I EWE
Sbjct: 53  RTCRCRSVSSES-STAAAADTADDEEEVTKSDSEEEEMDPLAEVCYLDPEADAEGIREWE 112

Query: 111 LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLP 170
           LDFCSRPILD RGKKVWELV CD +LSLQ+T++FPN  INS+TLRDA++S+   LGVPLP
Sbjct: 113 LDFCSRPILDARGKKVWELVVCDATLSLQFTRFFPNTSINSVTLRDALASVATSLGVPLP 172

Query: 171 EKIRFFRSQMQTIITKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLL 230
           ++ RFFRSQMQTII++AC ELGVK +PS+RC+SLLLWLEERYETVY+RHPGFQ G+KPLL
Sbjct: 173 DRARFFRSQMQTIISRACNELGVKAVPSRRCVSLLLWLEERYETVYSRHPGFQSGTKPLL 232

Query: 231 ALDNPFPMELPDNLFGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTM 290
            LDNPFP  LP+NLFG++WAFVQLPFSAV+EEV +L   + FG+ LDLDLLG E+D+NT+
Sbjct: 233 TLDNPFPTSLPENLFGDKWAFVQLPFSAVREEVESLERRYAFGAGLDLDLLGFELDENTL 292

Query: 291 IPGLSVASSRAQPLAAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEA 350
           IPG++V SSRA+PLAAWMNG+E+ S+E DT RA LILS G+STRYVYA Y+K+  TT EA
Sbjct: 293 IPGVAVESSRAKPLAAWMNGLEICSMEVDTGRANLILSAGVSTRYVYAGYQKSAATTQEA 352

Query: 351 EAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV 388
           EAWEAAKKACGGLHFLAIQ++L+S+ CVGFWLLLDLPPPPV
Sbjct: 353 EAWEAAKKACGGLHFLAIQENLNSDGCVGFWLLLDLPPPPV 392

[Close]

BLAST of Csor.00g004960 vs. NCBI nr
Match: KAG6593295.1 (Protein TAB2-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 776 bits (2004), Expect = 4.14e-283
Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTPKRFSADFRINQQLLRRFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDEDEDEDEVEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120
           SSISVPEEVEVAVDEDEDEDEVEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK
Sbjct: 61  SSISVPEEVEVAVDEDEDEDEVEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120

Query: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180
           KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII
Sbjct: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180

Query: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240
           TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL
Sbjct: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240

Query: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300
           FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL
Sbjct: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300

Query: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360
           AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH
Sbjct: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360

Query: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 387
           FLAIQDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 387

[Close]

BLAST of Csor.00g004960 vs. NCBI nr
Match: XP_023515235.1 (protein TAB2 homolog, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 769 bits (1985), Expect = 3.26e-280
Identity = 383/387 (98.97%), Postives = 385/387 (99.48%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKT KRFSADFRINQQLLRRFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLRRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDEDEDEDEVEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120
           SSISVP+EVEVAVDEDEDEDE EDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK
Sbjct: 61  SSISVPDEVEVAVDEDEDEDEAEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120

Query: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180
           KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII
Sbjct: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180

Query: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240
           TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL
Sbjct: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240

Query: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300
           FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL
Sbjct: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300

Query: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360
           AAW+NGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH
Sbjct: 301 AAWINGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360

Query: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 387
           FLAIQDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 387

[Close]

BLAST of Csor.00g004960 vs. NCBI nr
Match: XP_023004562.1 (protein TAB2 homolog, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 761 bits (1964), Expect = 7.02e-277
Identity = 383/395 (96.96%), Postives = 384/395 (97.22%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKT KRFSADFRINQQLL RFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLHRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDEDEDEDEVE--------DDPTLELAYLDSETDPESITEWELDFCSR 120
           SSISVPEEVEVAVDEDEDEDE E        DDPTLELAYLDSETDPESITEWELDFCSR
Sbjct: 61  SSISVPEEVEVAVDEDEDEDEAEAEAEAEAEDDPTLELAYLDSETDPESITEWELDFCSR 120

Query: 121 PILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFF 180
           PILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFF
Sbjct: 121 PILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFF 180

Query: 181 RSQMQTIITKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPF 240
           RSQMQTIITKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPF
Sbjct: 181 RSQMQTIITKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPF 240

Query: 241 PMELPDNLFGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSV 300
           PMELPDNLFGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDN+MIPGLSV
Sbjct: 241 PMELPDNLFGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNSMIPGLSV 300

Query: 301 ASSRAQPLAAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAA 360
           ASSRAQPLAAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAA
Sbjct: 301 ASSRAQPLAAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAA 360

Query: 361 KKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV 387
           KKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 KKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV 395

[Close]

BLAST of Csor.00g004960 vs. NCBI nr
Match: XP_022959769.1 (protein TAB2 homolog, chloroplastic [Cucurbita moschata])

HSP 1 Score: 758 bits (1957), Expect = 4.82e-276
Identity = 380/387 (98.19%), Postives = 380/387 (98.19%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPF QSIKTPKRFSADFRINQQLLRRFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDEDEDEDEVEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120
           SSISVPEEVEVAVDEDED      DPTLELAYLDSETDPESITEWELDFCSRPILDIRGK
Sbjct: 61  SSISVPEEVEVAVDEDED------DPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120

Query: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180
           KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII
Sbjct: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180

Query: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240
           TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL
Sbjct: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240

Query: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300
           FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL
Sbjct: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300

Query: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360
           AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH
Sbjct: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360

Query: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 387
           FLAIQDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 381

[Close]

BLAST of Csor.00g004960 vs. NCBI nr
Match: XP_023004563.1 (protein TAB2 homolog, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 757 bits (1954), Expect = 1.49e-275
Identity = 379/387 (97.93%), Postives = 380/387 (98.19%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKT KRFSADFRINQQLL RFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLHRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDEDEDEDEVEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120
           SSISVPEEVEVAVDEDE     EDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK
Sbjct: 61  SSISVPEEVEVAVDEDE----AEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120

Query: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180
           KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII
Sbjct: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180

Query: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240
           TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL
Sbjct: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240

Query: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300
           FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDN+MIPGLSVASSRAQPL
Sbjct: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNSMIPGLSVASSRAQPL 300

Query: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360
           AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH
Sbjct: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360

Query: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 387
           FLAIQDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 383

[Close]

BLAST of Csor.00g004960 vs. ExPASy TrEMBL
Match: A0A6J1KQS1 (protein TAB2 homolog, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497827 PE=4 SV=1)

HSP 1 Score: 761 bits (1964), Expect = 3.40e-277
Identity = 383/395 (96.96%), Postives = 384/395 (97.22%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKT KRFSADFRINQQLL RFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLHRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDEDEDEDEVE--------DDPTLELAYLDSETDPESITEWELDFCSR 120
           SSISVPEEVEVAVDEDEDEDE E        DDPTLELAYLDSETDPESITEWELDFCSR
Sbjct: 61  SSISVPEEVEVAVDEDEDEDEAEAEAEAEAEDDPTLELAYLDSETDPESITEWELDFCSR 120

Query: 121 PILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFF 180
           PILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFF
Sbjct: 121 PILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFF 180

Query: 181 RSQMQTIITKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPF 240
           RSQMQTIITKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPF
Sbjct: 181 RSQMQTIITKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPF 240

Query: 241 PMELPDNLFGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSV 300
           PMELPDNLFGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDN+MIPGLSV
Sbjct: 241 PMELPDNLFGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNSMIPGLSV 300

Query: 301 ASSRAQPLAAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAA 360
           ASSRAQPLAAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAA
Sbjct: 301 ASSRAQPLAAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAA 360

Query: 361 KKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV 387
           KKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 KKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV 395

[Close]

BLAST of Csor.00g004960 vs. ExPASy TrEMBL
Match: A0A6J1H921 (protein TAB2 homolog, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111460742 PE=4 SV=1)

HSP 1 Score: 758 bits (1957), Expect = 2.34e-276
Identity = 380/387 (98.19%), Postives = 380/387 (98.19%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPF QSIKTPKRFSADFRINQQLLRRFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDEDEDEDEVEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120
           SSISVPEEVEVAVDEDED      DPTLELAYLDSETDPESITEWELDFCSRPILDIRGK
Sbjct: 61  SSISVPEEVEVAVDEDED------DPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120

Query: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180
           KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII
Sbjct: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180

Query: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240
           TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL
Sbjct: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240

Query: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300
           FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL
Sbjct: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300

Query: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360
           AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH
Sbjct: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360

Query: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 387
           FLAIQDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 381

[Close]

BLAST of Csor.00g004960 vs. ExPASy TrEMBL
Match: A0A6J1KZX3 (protein TAB2 homolog, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497827 PE=4 SV=1)

HSP 1 Score: 757 bits (1954), Expect = 7.22e-276
Identity = 379/387 (97.93%), Postives = 380/387 (98.19%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKT KRFSADFRINQQLL RFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLHRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDEDEDEDEVEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120
           SSISVPEEVEVAVDEDE     EDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK
Sbjct: 61  SSISVPEEVEVAVDEDE----AEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120

Query: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180
           KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII
Sbjct: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180

Query: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240
           TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL
Sbjct: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240

Query: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300
           FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDN+MIPGLSVASSRAQPL
Sbjct: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNSMIPGLSVASSRAQPL 300

Query: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360
           AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH
Sbjct: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360

Query: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 387
           FLAIQDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 383

[Close]

BLAST of Csor.00g004960 vs. ExPASy TrEMBL
Match: A0A6J1KWL7 (protein TAB2 homolog, chloroplastic isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111497827 PE=4 SV=1)

HSP 1 Score: 754 bits (1948), Expect = 5.50e-275
Identity = 378/387 (97.67%), Postives = 379/387 (97.93%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKT KRFSADFRINQQLL RFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLHRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDEDEDEDEVEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120
           SSISVPEEVEVAVDEDED      DPTLELAYLDSETDPESITEWELDFCSRPILDIRGK
Sbjct: 61  SSISVPEEVEVAVDEDED------DPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120

Query: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180
           KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII
Sbjct: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180

Query: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240
           TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL
Sbjct: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240

Query: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300
           FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDN+MIPGLSVASSRAQPL
Sbjct: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNSMIPGLSVASSRAQPL 300

Query: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360
           AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH
Sbjct: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360

Query: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 387
           FLAIQDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 381

[Close]

BLAST of Csor.00g004960 vs. ExPASy TrEMBL
Match: A0A5A7UYM5 (DUF1092 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G00880 PE=4 SV=1)

HSP 1 Score: 690 bits (1781), Expect = 1.44e-249
Identity = 346/387 (89.41%), Postives = 359/387 (92.76%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRT  GLH  K KP S PF QSIKT  RFSA+ RI+QQ LRRF+SNSVSE
Sbjct: 1   MATLSFNPTRIRTLVGLHFTKSKPISSPFSQSIKTANRFSANGRISQQPLRRFQSNSVSE 60

Query: 61  SSISVPEEVEVAVDEDEDEDEVEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120
           SS+SVPEEVE+  DED        DPTLE+AYLDSETDPESITEWELDFCSRPILDIRGK
Sbjct: 61  SSVSVPEEVELNEDED--------DPTLEMAYLDSETDPESITEWELDFCSRPILDIRGK 120

Query: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180
           KVWELV CDNSLSLQYTKYFPNNVINSITLRDAISSI EELGVPLPEKIRFFRSQMQTII
Sbjct: 121 KVWELVVCDNSLSLQYTKYFPNNVINSITLRDAISSIAEELGVPLPEKIRFFRSQMQTII 180

Query: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240
           TKACTELG+KPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELP+NL
Sbjct: 181 TKACTELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENL 240

Query: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300
           FGERWAFVQLPFSAVQEE+SNL  +FMFGSSLDLDLLGI+IDD TMIPGLSVA+SRAQPL
Sbjct: 241 FGERWAFVQLPFSAVQEEISNLKETFMFGSSLDLDLLGIDIDDKTMIPGLSVATSRAQPL 300

Query: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360
           AAWMNGMEVYSVEADTSRACLILSVGI+TRYVYATYKK PVTTAEAEAWEAAKKACGGLH
Sbjct: 301 AAWMNGMEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLH 360

Query: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 387
           FLAIQDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 379

[Close]

BLAST of Csor.00g004960 vs. TAIR 10
Match: AT3G08010.1 (RNA binding )

HSP 1 Score: 557.0 bits (1434), Expect = 1.2e-158
Identity = 278/387 (71.83%), Postives = 326/387 (84.24%), Query Frame = 0


Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATL FN  RI+TP    +  PKP S  F + IKT   FS++  + +    RF S S+ E
Sbjct: 1   MATLGFNTRRIQTPSLPRI--PKPSS--FTKPIKTHHLFSSETLLKR---CRFVSRSLPE 60

Query: 61  SSISVPEEVEVAVDEDEDEDEVEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120
           SS+S+ +E EVA + +      EDDPT EL+YLD E+D +SI EWELDFCSRPILD RGK
Sbjct: 61  SSLSITKEQEVANEVE------EDDPTSELSYLDPESDADSIKEWELDFCSRPILDSRGK 120

Query: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180
           K+WELV CD SLSLQ TKYFPNNVINSITL+DAI +IT++LGVPLPEKIRFFRSQMQTII
Sbjct: 121 KIWELVVCDASLSLQVTKYFPNNVINSITLKDAIVTITQDLGVPLPEKIRFFRSQMQTII 180

Query: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240
           TKAC EL +K +PSKRCLSL LWL+ERY+TVYTRHPGFQKGS PLL+LDNPFPM LP+NL
Sbjct: 181 TKACKELAIKAVPSKRCLSLFLWLQERYDTVYTRHPGFQKGSLPLLSLDNPFPMNLPENL 240

Query: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300
           FGE+WAFVQLP+SAV+EE+S+ +  F+FG+SLDLDLLGIE+D+NT+IPGLSVA+SRA+PL
Sbjct: 241 FGEKWAFVQLPYSAVREEISDFDEKFVFGASLDLDLLGIEVDENTLIPGLSVATSRAKPL 300

Query: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360
           AAWMNG+EV S+EAD+S+ CLILSVGI+TRYVYATYKK PVTT EAEAWE+AKK  GGLH
Sbjct: 301 AAWMNGLEVCSIEADSSKGCLILSVGIATRYVYATYKKTPVTTDEAEAWESAKKTSGGLH 360

Query: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 388
           FLAIQDDLDS+DCVGFWLL+DLPPPPV
Sbjct: 361 FLAIQDDLDSDDCVGFWLLIDLPPPPV 374

The following BLAST results are available for this feature:

BLAST of Csor.00g004960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SFB3	1.7e-157	71.83	Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATAB2 PE=...	[more]
B4FTR7	1.5e-137	69.14	Protein TAB2 homolog, chloroplastic OS=Zea mays OX=4577 GN=TAB2 PE=2 SV=1	[more]
Q6K9C1	4.8e-136	68.91	Protein TAB2 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]

BLAST of Csor.00g004960 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593295.1	4.14e-283	100.00	Protein TAB2-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023515235.1	3.26e-280	98.97	protein TAB2 homolog, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_023004562.1	7.02e-277	96.96	protein TAB2 homolog, chloroplastic isoform X1 [Cucurbita maxima]	[more]
XP_022959769.1	4.82e-276	98.19	protein TAB2 homolog, chloroplastic [Cucurbita moschata]	[more]
XP_023004563.1	1.49e-275	97.93	protein TAB2 homolog, chloroplastic isoform X2 [Cucurbita maxima]	[more]

BLAST of Csor.00g004960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KQS1	3.40e-277	96.96	protein TAB2 homolog, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1H921	2.34e-276	98.19	protein TAB2 homolog, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11146074...	[more]
A0A6J1KZX3	7.22e-276	97.93	protein TAB2 homolog, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1KWL7	5.50e-275	97.67	protein TAB2 homolog, chloroplastic isoform X3 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5A7UYM5	1.44e-249	89.41	DUF1092 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Csor.00g004960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08010.1	1.2e-158	71.83	RNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009472	Tab2-like	PFAM	PF06485	Tab2_like	coord: 105..379 e-value: 9.9E-90 score: 300.7
IPR009472	Tab2-like	PANTHER	PTHR34556	FAMILY NOT NAMED	coord: 1..387

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g004960.m01	Csor.00g004960.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding