Csor.00g004360 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g004360
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein HEADING DATE REPRESSOR 1
Location	Csor_Chr08: 3395554 .. 3399094 (+)
RNA-Seq Expression	Csor.00g004360
Synteny	Csor.00g004360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAAATCTTGACCGTTGGATCATAACACGTGGTTTGGATGTCGTTTTGTTCTGCCATTTATCTGCTTCGCGTCTCGGTGAACGCGACCACATCAAATACCCACAACTCCATGTTCATCCCTCTCTCTCTCTCTCTTCCTCTGTATGTGAAAATTCGAAGAGGATTCTTCACAGCGAAGATTCGGCGAAGTTCTTCCCCGAATTCTCTCCAATGGCGCGCGATAATTCCGGTAAGCTAGATAGGATTCTGGAAGGCTTTTCTCCGGCGTCGGCTCCTCGAATTCAGTGGAAATCTCGCCGGAGATCAGGTAGTGCTACTTAATTCTTCTCTCTGGTGGAATTTGGCTTCAATTTTTGAAAATTTTGTTAAGTCGATGAAGATCGGAAACTCGGAATTTCTCTATCGGAAAGTAATCGAATCCGTCTAGGTTTTGTAATTATCGATATAATCTGAGACGTTTCCTCACAAATTTTGAAGAACACTTCTGCCCTAACCAGGCTCCTCTGTTCTGATTCCTCATCTCTGGCTCTTGAATTGCTTTCGTGATTTCTTTGATGATGAATTCATTTGTCAGTTCGTCAATAGCCTTGAAATTGGAGATGAGAAAAGATGCACGCTAACACGAACGGTTAACTTCGCTCTTAAGTTACGTGTGCTTTTCTGTTTCTGTTCATGGCCGCCTCGTGATTTCTGTTACCAAAAAAAAAAAAAAAATTCAATACTCTTGATTTTTTTTTTTTTTTCTTTTGTTAATTACTGAATTTTAGGCCCTGGAAATGATGATAAGGATTAATTTAATTGTTTTTTTTTTTTAGTGATACAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGGTGATAAAATCGGCTGAACCAACCCATTTCCGCCCCACCCGTGGGAGTCGACGTTTTCATTGACTTTATTTATATATTCATTTATTCATTTTCCTCATTTATTTGATACGAAAGGCCATTATTGTCATCATATGGGGAATTATTAATTAAAATTGAATTTAGAAACTATTATTTCTTAAAACGACGTCGGAAAAGGGATCCTCCACCCCATAATAGAGCATGCCTTACAAGTCATGAGCTTTTTTGTTTGTTTTTAAATAATTTTTTATGCTTTTTTAAAAAAGTTTTTGTAATTTGATTTTTATTTTTATTCTTTATAAATTCATAATATTCTTCTTAATTAGTCAAGTTAGTCGAGTGAGGATTGAAATGTTTAAATGTGTCTAAATGGACATTGGATCCCTATTCCTACACTTAGATACTTTTCTCTAATATCAAGTTTGGTATTCAAATGACGGGACTCAACACCAACTATTTTAAGTTTTTTTTTTTTTTTCATTAGGCCCACATTCAGTTCTCAGTTTCTTGTTGTCTTCTTCTCCTTCAAACTCAAGATTTGATGATTTGATGATTTGATGATTTGATGATTTGATGATTTCTTGTTACCATCCCATCTTCCCATTTCATTTCATTTATCATCATCATAATGTAATTTTTGTATGATTTATTATATTTTTTTAAGAGTTGCCTTTACTTTTCTCCTTTTCTCTTTCTTCTTGTTCATAGTTCACTGTGTCTCTCATTATTGTATCTTTGCTTTTAATATAATTTTCCCTTTTCTGATGGAAGCATGGTTTGTTCATACTTTTCACAATTTGGTTATGTCAACCTCAATTAAATGTCTTTTTTTTTTTTTCACTTTTGTTCTTCTAGCTTAGGGTTATCCTCTCACCCCAAACTATTTTTATTTTTAACAATTAAAAAAAAAAAGTCCTATAAAACCGAGCAAAAAAAATTGTTGATGTCGTTTTGGTCTCTAAACTTCAAATTTTGTTGTTAAGGGGTGATGGTGTAGTTGACTAGTGCTAGGTCTCATAGCTTAGAGTTATCATGAGGTCAGGAGTTTAGCCTCTCACACCCCATTAATATTTTTTTTAACAATTAAAAAAAACGTCCTATTGAACCTAGCTAAACATTTGTTTGTGTCATTTTGATCTCTAGACTTTAAAATTTTTCATCAGAGGGTGGTGGCGCAGTTGGCTAGCGTGTAGGTCTCATAACTTAGAGTTATCCTGAGGTCGAGAGTTCAAGCCTCTCTCACCCCATGCTATTTTTATTTTTTAACAATGAAAAAAAACATCCTATAAAAACTAGCTAAACATTTGTTTGTGTCATTTTGATCTCTAGACTTTAAATTTTTTTGTTAGGGGGTGGTGGCGCAGTTGGGTAGTGCGTAGGTCTCATAGCTTAGAGTTATCCTGAGGTTGAGAGTTCGAGCCTCTCTCACCCCATAGTATTTTTCTTTTTTAACCACTAAAAAAACGTCCTATAAAACCTAGCTAAACATTTGTTTGTGTCGGGGGTGGTGGTGCAGTTGGGTAGCGCATAGGTCTCATAGGTTAGAGTTATCCTGAGGTTGAGAGTTCGAGTCTCTCTCACCCCATAGTATTTTTCTTTTTTAACCACTAAAAAAACGTCCTATAAAACCTAGCTAAACATTTGTTTGTGTCGGGGGTGGTGGTGCAGTTGGGTAGCGCATAGGTCTCATAGGTTAGAGTTATCCTGAGGTTGAGAGTTCGAGTCTCTCTCACCCCATAGTATTTTTCTTTTTTAACCACTAAAAAAACGTCCTATAAAACCTAGCTGAACATTTGTTTGTGCGTTCTGATCACTGAACTTCAAATATTTTCTTCAAGGGGTGGTGGCACAGTTGGGTAGTGCGTAGGTCTCATAGCTTAGTGTTATCCTGAGATCGAGAGTTTGAGCCTCTCTCACCCGTAGTTATTTTTCTTTTTAAACAATTAAAAACAAACGCATTTTGTTTGTGTCGTTTGATCTCTTTAGCTTCAAATTTTTTCATCAAGCATTTCTGTATTTGTTGTCCCTCTAATTTTGTTGGAACTAGAATGCTCTCTTCTTTCCAACAGCTACCGGGAGGATCTTAGACAACATAACTCAAGATCATGATGCTGCTGACAAAACATCCGACAAACACGAAGAACCTCAGCCCCCTAAAACACTCTTCCCCGACCTCTCCGACCGTCGAAAGGCCCTCTTTGAGCCTTTAGAATCCATCAAAAACATCAATGGCCGCAGACCATCAGCTGAATCCTTACTCCCTCCACCCGACTTCGATGCCACCGCATATCCCCGAGGCTGGCTGATCGGAAAGAAGCGAAAACTCGTCAATGTCGACGTTGTCGAAAGCATGCGGAGGATTGCCATTCAGGAAATGAACAGAAAGGCATTCCCCTAATTTTACTATTATTATTACATCACATCAACGTGGCCTCTCAGTTCATTGTTGTTGTCGTTGTTGTTGTTATTATAGGACCGAGAAATCAACGGTCTGAACGAGCAGCTCGACGAGGACGCGCGCTGCTTAGAACATCTTCAAATTCAACTTCTGCAAGAGAAGAGCAAAAGATCAGAGGTTGAAAGGGAAAATGCAATGCTGCATGATCAAGTGAGTATGCTAATGAGCATGCTGGAAAATGGAGCTGATGGCTCAGATGAACCTTAA

mRNA sequence

ATGCCAAATCTTGACCGTTGGATCATAACACGTGGTTTGGATGTCGTTTTGTTCTGCCATTTATCTGCTTCGCGTCTCGGTGAACGCGACCACATCAAATACCCACAACTCCATGTTCATCCCTCTCTCTCTCTCTCTTCCTCTGTATGTGAAAATTCGAAGAGGATTCTTCACAGCGAAGATTCGGCGAAGTTCTTCCCCGAATTCTCTCCAATGGCGCGCGATAATTCCGGTAAGCTAGATAGGATTCTGGAAGGCTTTTCTCCGGCGTCGGCTCCTCGAATTCAGTGGAAATCTCGCCGGAGATCAGCTACCGGGAGGATCTTAGACAACATAACTCAAGATCATGATGCTGCTGACAAAACATCCGACAAACACGAAGAACCTCAGCCCCCTAAAACACTCTTCCCCGACCTCTCCGACCGTCGAAAGGCCCTCTTTGAGCCTTTAGAATCCATCAAAAACATCAATGGCCGCAGACCATCAGCTGAATCCTTACTCCCTCCACCCGACTTCGATGCCACCGCATATCCCCGAGGCTGGCTGATCGGAAAGAAGCGAAAACTCGTCAATGTCGACGTTGTCGAAAGCATGCGGAGGATTGCCATTCAGGAAATGAACAGAAAGGACCGAGAAATCAACGGTCTGAACGAGCAGCTCGACGAGGACGCGCGCTGCTTAGAACATCTTCAAATTCAACTTCTGCAAGAGAAGAGCAAAAGATCAGAGGTTGAAAGGGAAAATGCAATGCTGCATGATCAAGTGAGTATGCTAATGAGCATGCTGGAAAATGGAGCTGATGGCTCAGATGAACCTTAA

Coding sequence (CDS)

ATGCCAAATCTTGACCGTTGGATCATAACACGTGGTTTGGATGTCGTTTTGTTCTGCCATTTATCTGCTTCGCGTCTCGGTGAACGCGACCACATCAAATACCCACAACTCCATGTTCATCCCTCTCTCTCTCTCTCTTCCTCTGTATGTGAAAATTCGAAGAGGATTCTTCACAGCGAAGATTCGGCGAAGTTCTTCCCCGAATTCTCTCCAATGGCGCGCGATAATTCCGGTAAGCTAGATAGGATTCTGGAAGGCTTTTCTCCGGCGTCGGCTCCTCGAATTCAGTGGAAATCTCGCCGGAGATCAGCTACCGGGAGGATCTTAGACAACATAACTCAAGATCATGATGCTGCTGACAAAACATCCGACAAACACGAAGAACCTCAGCCCCCTAAAACACTCTTCCCCGACCTCTCCGACCGTCGAAAGGCCCTCTTTGAGCCTTTAGAATCCATCAAAAACATCAATGGCCGCAGACCATCAGCTGAATCCTTACTCCCTCCACCCGACTTCGATGCCACCGCATATCCCCGAGGCTGGCTGATCGGAAAGAAGCGAAAACTCGTCAATGTCGACGTTGTCGAAAGCATGCGGAGGATTGCCATTCAGGAAATGAACAGAAAGGACCGAGAAATCAACGGTCTGAACGAGCAGCTCGACGAGGACGCGCGCTGCTTAGAACATCTTCAAATTCAACTTCTGCAAGAGAAGAGCAAAAGATCAGAGGTTGAAAGGGAAAATGCAATGCTGCATGATCAAGTGAGTATGCTAATGAGCATGCTGGAAAATGGAGCTGATGGCTCAGATGAACCTTAA

Protein sequence

MPNLDRWIITRGLDVVLFCHLSASRLGERDHIKYPQLHVHPSLSLSSSVCENSKRILHSEDSAKFFPEFSPMARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQVSMLMSMLENGADGSDEP

Homology

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BLAST of Csor.00g004360 vs. ExPASy Swiss-Prot
Match: B8AE37 (Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. indica OX=39946 GN=HDR1 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 8.2e-50
Identity = 121/202 (59.90%), Postives = 145/202 (71.78%), Query Frame = 0


Query: 89  PASA--PRIQWKSRRRSAT--GRILDNITQDHDAADK--TSDKHEEP---------QPPK 148
           PASA  PRI WKSRRRSA+  GR L     + +AAD+   +  HEE              
Sbjct: 4   PASADPPRIFWKSRRRSASANGRSLQQ-ELNKEAADEQLNNQAHEEAMKIDDANAVSTDD 63

Query: 149 TLFPD----LSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKL 208
            + PD    LS++RKALFEPLE    ING+R SAE LLPPPDF+  +YP+GWL+GKKRKL
Sbjct: 64  DVHPDPKANLSEKRKALFEPLEP---INGKRSSAEMLLPPPDFEPASYPKGWLVGKKRKL 123

Query: 209 VNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENA 268
           VNVDVVESMRRIAIQEMNRKDREINGLNEQL+ED+R LE LQ QL  E+ KR+E+E+EN+
Sbjct: 124 VNVDVVESMRRIAIQEMNRKDREINGLNEQLEEDSRVLELLQKQLADERKKRTEIEKENS 183

Query: 269 MLHDQVSMLMSMLENGADGSDE 272
           MLH+QVSMLM+ML+      +E
Sbjct: 184 MLHEQVSMLMNMLDENEAFDEE 201

[Close]

BLAST of Csor.00g004360 vs. ExPASy Swiss-Prot
Match: Q6K678 (Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HDR1 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 8.2e-50
Identity = 121/202 (59.90%), Postives = 145/202 (71.78%), Query Frame = 0


Query: 89  PASA--PRIQWKSRRRSAT--GRILDNITQDHDAADK--TSDKHEEP---------QPPK 148
           PASA  PRI WKSRRRSA+  GR L     + +AAD+   +  HEE              
Sbjct: 4   PASADPPRIFWKSRRRSASANGRSLQQ-ELNKEAADEQLNNQAHEEAMKIDDANAVSTDD 63

Query: 149 TLFPD----LSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKL 208
            + PD    LS++RKALFEPLE    ING+R SAE LLPPPDF+  +YP+GWL+GKKRKL
Sbjct: 64  DVHPDPKANLSEKRKALFEPLEP---INGKRSSAEMLLPPPDFEPASYPKGWLVGKKRKL 123

Query: 209 VNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENA 268
           VNVDVVESMRRIAIQEMNRKDREINGLNEQL+ED+R LE LQ QL  E+ KR+E+E+EN+
Sbjct: 124 VNVDVVESMRRIAIQEMNRKDREINGLNEQLEEDSRVLELLQKQLADERKKRTEIEKENS 183

Query: 269 MLHDQVSMLMSMLENGADGSDE 272
           MLH+QVSMLM+ML+      +E
Sbjct: 184 MLHEQVSMLMNMLDENEAFDEE 201

[Close]

BLAST of Csor.00g004360 vs. NCBI nr
Match: KAG6593354.1 (Protein HEADING DATE REPRESSOR 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 542 bits (1396), Expect = 2.58e-194
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MPNLDRWIITRGLDVVLFCHLSASRLGERDHIKYPQLHVHPSLSLSSSVCENSKRILHSE 60
           MPNLDRWIITRGLDVVLFCHLSASRLGERDHIKYPQLHVHPSLSLSSSVCENSKRILHSE
Sbjct: 1   MPNLDRWIITRGLDVVLFCHLSASRLGERDHIKYPQLHVHPSLSLSSSVCENSKRILHSE 60

Query: 61  DSAKFFPEFSPMARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAAD 120
           DSAKFFPEFSPMARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAAD
Sbjct: 61  DSAKFFPEFSPMARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAAD 120

Query: 121 KTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRG 180
           KTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRG
Sbjct: 121 KTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRG 180

Query: 181 WLIGKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSK 240
           WLIGKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSK
Sbjct: 181 WLIGKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSK 240

Query: 241 RSEVERENAMLHDQVSMLMSMLENGADGSDEP 272
           RSEVERENAMLHDQVSMLMSMLENGADGSDEP
Sbjct: 241 RSEVERENAMLHDQVSMLMSMLENGADGSDEP 272

[Close]

BLAST of Csor.00g004360 vs. NCBI nr
Match: XP_023004210.1 (protein HEADING DATE REPRESSOR 1 [Cucurbita maxima])

HSP 1 Score: 512 bits (1319), Expect = 2.28e-182
Identity = 262/272 (96.32%), Postives = 264/272 (97.06%), Query Frame = 0


Query: 2   PNLDRWIITRGLDVVLFCHLSASRLGERDHIKYPQLHVHPSLSLSSSVCENSKRILHSED 61
           PNL+RWIITRGLDVVLFC+LSASRLGERDHIKYPQLHV  SLS   SVCENSKRILHSED
Sbjct: 14  PNLNRWIITRGLDVVLFCNLSASRLGERDHIKYPQLHVPLSLSPPPSVCENSKRILHSED 73

Query: 62  SAKFFPEFSPMARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADK 121
           SAKFFPEFSPMA DNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADK
Sbjct: 74  SAKFFPEFSPMASDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADK 133

Query: 122 TSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGW 181
           TSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGW
Sbjct: 134 TSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGW 193

Query: 182 LIGKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 241
           LIGKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR
Sbjct: 194 LIGKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 253

Query: 242 SEVERENAMLHDQVSMLMSMLEN-GADGSDEP 272
           SEVERENAMLHDQVSMLMSMLEN GADG DEP
Sbjct: 254 SEVERENAMLHDQVSMLMSMLENEGADGPDEP 285

[Close]

BLAST of Csor.00g004360 vs. NCBI nr
Match: XP_023515206.1 (protein HEADING DATE REPRESSOR 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439 bits (1128), Expect = 1.12e-153
Identity = 226/232 (97.41%), Postives = 228/232 (98.28%), Query Frame = 0


Query: 42  SLSLSSSVCENSKRILHSEDSAKFFPEFSPMARDNSGKLDRILEGFSPASAPRIQWKSRR 101
           S SLSSSVCENSKRILHSEDSAKFFPEFSPMARDNSGKLDRILEGFSPASAPRIQWKSRR
Sbjct: 28  SSSLSSSVCENSKRILHSEDSAKFFPEFSPMARDNSGKLDRILEGFSPASAPRIQWKSRR 87

Query: 102 RSATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRP 161
           RSAT RILDNITQDHDAADKTSDKHE+PQPPKTLFPDLSDRRKALFEPLES+KNINGRRP
Sbjct: 88  RSATERILDNITQDHDAADKTSDKHEQPQPPKTLFPDLSDRRKALFEPLESVKNINGRRP 147

Query: 162 SAESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLD 221
           SAESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAIQEMNRKDREI GLNEQLD
Sbjct: 148 SAESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAIQEMNRKDREIGGLNEQLD 207

Query: 222 EDARCLEHLQIQLLQEKSKRSEVERENAMLHDQVSMLMSMLEN-GADGSDEP 272
           EDARCLEHLQIQLLQEKSKRSEVERENAMLHDQVSMLMSMLEN GADGSDEP
Sbjct: 208 EDARCLEHLQIQLLQEKSKRSEVERENAMLHDQVSMLMSMLENEGADGSDEP 259

[Close]

BLAST of Csor.00g004360 vs. NCBI nr
Match: XP_022959741.1 (protein HEADING DATE REPRESSOR 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 387 bits (995), Expect = 2.63e-134
Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 72  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQP 131
           MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKH+EPQP
Sbjct: 1   MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHQEPQP 60

Query: 132 PKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVN 191
           PKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVN
Sbjct: 61  PKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVN 120

Query: 192 VDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAML 251
           VDVVESMRRIAIQEMNRKDREI+GLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAML
Sbjct: 121 VDVVESMRRIAIQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAML 180

Query: 252 HDQVSMLMSMLEN-GADGSDEP 272
           HDQVSMLMSMLEN GADGSDEP
Sbjct: 181 HDQVSMLMSMLENEGADGSDEP 202

[Close]

BLAST of Csor.00g004360 vs. NCBI nr
Match: KAG7025699.1 (Protein HEADING DATE REPRESSOR 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 349 bits (896), Expect = 1.78e-119
Identity = 183/202 (90.59%), Postives = 185/202 (91.58%), Query Frame = 0


Query: 72  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQP 131
           MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQP
Sbjct: 1   MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQP 60

Query: 132 PKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVN 191
           PKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVN
Sbjct: 61  PKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVN 120

Query: 192 VDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAML 251
           VD                DREI+GLNEQLDEDARCLEHLQIQLLQEKSKRSE+ERENAML
Sbjct: 121 VD----------------DREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEIERENAML 180

Query: 252 HDQVSMLMSMLEN-GADGSDEP 272
           HDQVSMLMSMLEN GADGSDEP
Sbjct: 181 HDQVSMLMSMLENEGADGSDEP 186

[Close]

BLAST of Csor.00g004360 vs. ExPASy TrEMBL
Match: A0A6J1KTY5 (protein HEADING DATE REPRESSOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111497606 PE=4 SV=1)

HSP 1 Score: 512 bits (1319), Expect = 1.10e-182
Identity = 262/272 (96.32%), Postives = 264/272 (97.06%), Query Frame = 0


Query: 2   PNLDRWIITRGLDVVLFCHLSASRLGERDHIKYPQLHVHPSLSLSSSVCENSKRILHSED 61
           PNL+RWIITRGLDVVLFC+LSASRLGERDHIKYPQLHV  SLS   SVCENSKRILHSED
Sbjct: 14  PNLNRWIITRGLDVVLFCNLSASRLGERDHIKYPQLHVPLSLSPPPSVCENSKRILHSED 73

Query: 62  SAKFFPEFSPMARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADK 121
           SAKFFPEFSPMA DNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADK
Sbjct: 74  SAKFFPEFSPMASDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADK 133

Query: 122 TSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGW 181
           TSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGW
Sbjct: 134 TSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGW 193

Query: 182 LIGKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 241
           LIGKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR
Sbjct: 194 LIGKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 253

Query: 242 SEVERENAMLHDQVSMLMSMLEN-GADGSDEP 272
           SEVERENAMLHDQVSMLMSMLEN GADG DEP
Sbjct: 254 SEVERENAMLHDQVSMLMSMLENEGADGPDEP 285

[Close]

BLAST of Csor.00g004360 vs. ExPASy TrEMBL
Match: A0A6J1H5Q2 (protein HEADING DATE REPRESSOR 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460721 PE=4 SV=1)

HSP 1 Score: 387 bits (995), Expect = 1.27e-134
Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 72  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQP 131
           MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKH+EPQP
Sbjct: 1   MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHQEPQP 60

Query: 132 PKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVN 191
           PKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVN
Sbjct: 61  PKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVN 120

Query: 192 VDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAML 251
           VDVVESMRRIAIQEMNRKDREI+GLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAML
Sbjct: 121 VDVVESMRRIAIQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAML 180

Query: 252 HDQVSMLMSMLEN-GADGSDEP 272
           HDQVSMLMSMLEN GADGSDEP
Sbjct: 181 HDQVSMLMSMLENEGADGSDEP 202

[Close]

BLAST of Csor.00g004360 vs. ExPASy TrEMBL
Match: A0A6J1D3E7 (protein HEADING DATE REPRESSOR 1 OS=Momordica charantia OX=3673 GN=LOC111016948 PE=4 SV=1)

HSP 1 Score: 329 bits (844), Expect = 1.64e-111
Identity = 169/210 (80.48%), Postives = 188/210 (89.52%), Query Frame = 0


Query: 72  MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQP 131
           M RDNSGK+DRILEGFSPASAPRI WKSRRRSA+GR LD +T+DHD+A+K  DK EEP  
Sbjct: 1   MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHD 60

Query: 132 P--------KTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLI 191
                    + + P+LS+RR+ALFEPLE +KNINGRRPSAESLLPPPDFDATAYPRGWLI
Sbjct: 61  KDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLI 120

Query: 192 GKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSE 251
           GKKRKLVNVDVVESMRRIA+QEMNRKDREI+GLNEQLDEDARCLEHLQ+QL+QEKSKRSE
Sbjct: 121 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVQEKSKRSE 180

Query: 252 VERENAMLHDQVSMLMSMLEN-GADGSDEP 272
           VERENAMLHDQ++MLM+MLEN GADGSDEP
Sbjct: 181 VERENAMLHDQINMLMNMLENEGADGSDEP 210

[Close]

BLAST of Csor.00g004360 vs. ExPASy TrEMBL
Match: A0A6J1H766 (protein HEADING DATE REPRESSOR 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460721 PE=4 SV=1)

HSP 1 Score: 323 bits (828), Expect = 2.74e-109
Identity = 167/171 (97.66%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 103 SATGRILDNITQDHDAADKTSDKHEEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPS 162
           +ATGRILDNITQDHDAADKTSDKH+EPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPS
Sbjct: 26  TATGRILDNITQDHDAADKTSDKHQEPQPPKTLFPDLSDRRKALFEPLESIKNINGRRPS 85

Query: 163 AESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLDE 222
           AESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAIQEMNRKDREI+GLNEQLDE
Sbjct: 86  AESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAIQEMNRKDREIDGLNEQLDE 145

Query: 223 DARCLEHLQIQLLQEKSKRSEVERENAMLHDQVSMLMSMLEN-GADGSDEP 272
           DARCLEHLQIQLLQEKSKRSEVERENAMLHDQVSMLMSMLEN GADGSDEP
Sbjct: 146 DARCLEHLQIQLLQEKSKRSEVERENAMLHDQVSMLMSMLENEGADGSDEP 196

[Close]

BLAST of Csor.00g004360 vs. ExPASy TrEMBL
Match: A0A5A7UUH2 (Protein HEADING DATE REPRESSOR 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001460 PE=4 SV=1)

HSP 1 Score: 318 bits (814), Expect = 1.33e-106
Identity = 167/211 (79.15%), Postives = 184/211 (87.20%), Query Frame = 0


Query: 70  SPMARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEP 129
           S M  ++SGK+DRILEGFSPASAPRIQW SRRRSA+GR L   T+D D+A+KT DK EE 
Sbjct: 23  SSMEHNHSGKIDRILEGFSPASAPRIQWNSRRRSASGRNLYKETEDQDSANKTCDKQEES 82

Query: 130 -------QPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWL 189
                  Q   T+ P+LS+RRKALFEPLE ++NINGRRPSAESLLPPPDFD T YPRGWL
Sbjct: 83  PANDNISQDTDTVPPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWL 142

Query: 190 IGKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRS 249
           IGKKRKLVNVDVVESMRRIA+QEMNRKDREI+GLNEQLDEDARCLEHLQIQLLQEKSKRS
Sbjct: 143 IGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKRS 202

Query: 250 EVERENAMLHDQVSMLMSMLEN-GADGSDEP 272
           EVERENAMLHDQ++MLMSML+N GADGSDEP
Sbjct: 203 EVERENAMLHDQINMLMSMLDNEGADGSDEP 233

[Close]

BLAST of Csor.00g004360 vs. TAIR 10
Match: AT1G80940.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 222.2 bits (565), Expect = 4.9e-58
Identity = 122/202 (60.40%), Postives = 156/202 (77.23%), Query Frame = 0


Query: 81  DRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDA-ADKTSDKH-------EEPQPP 140
           D  + GF P S  +I WKSR+RSA    L N+ +  +A  + T +K+       E+   P
Sbjct: 16  DGFVGGFFPVSTTKIAWKSRKRSA----LLNLDKAPEAVTEVTPEKNEITAMDTEKVGEP 75

Query: 141 KTLFPDLSDRRKALFEPLESIKNINGRRP-SAESLLPPPDFDATAYPRGWLIGKKRKLVN 200
            T  P LS++RKALFEPLE I N+NG+RP +A+SLLPPPDF+   YP+GWLIGKKRKLVN
Sbjct: 76  MTTTPLLSEKRKALFEPLEPITNLNGKRPTAADSLLPPPDFETANYPKGWLIGKKRKLVN 135

Query: 201 VDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAML 260
           VDVVESMRRIA+QEMNRKDREI+GLNEQL+ED+RCLEHLQ+QLLQE+SKR+E+EREN ML
Sbjct: 136 VDVVESMRRIAVQEMNRKDREIDGLNEQLEEDSRCLEHLQLQLLQERSKRTEIERENTML 195

Query: 261 HDQVSMLMSML-ENGADGSDEP 273
            +QV ML++M+ E+  +G++EP
Sbjct: 196 KEQVDMLVNMIQEDDEEGAEEP 213

[Close]

BLAST of Csor.00g004360 vs. TAIR 10
Match: AT1G80940.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 139.0 bits (349), Expect = 5.5e-33
Identity = 79/141 (56.03%), Postives = 100/141 (70.92%), Query Frame = 0


Query: 81  DRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDA-ADKTSDKH-------EEPQPP 140
           D  + GF P S  +I WKSR+RSA    L N+ +  +A  + T +K+       E+   P
Sbjct: 16  DGFVGGFFPVSTTKIAWKSRKRSA----LLNLDKAPEAVTEVTPEKNEITAMDTEKVGEP 75

Query: 141 KTLFPDLSDRRKALFEPLESIKNINGRRP-SAESLLPPPDFDATAYPRGWLIGKKRKLVN 200
            T  P LS++RKALFEPLE I N+NG+RP +A+SLLPPPDF+   YP+GWLIGKKRKLVN
Sbjct: 76  MTTTPLLSEKRKALFEPLEPITNLNGKRPTAADSLLPPPDFETANYPKGWLIGKKRKLVN 135

Query: 201 VDVVESMRRIAIQEMNRKDRE 213
           VDVVESMRRIA+QEMNRK ++
Sbjct: 136 VDVVESMRRIAVQEMNRKVKQ 152

The following BLAST results are available for this feature:

BLAST of Csor.00g004360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8AE37	8.2e-50	59.90	Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. indica OX=39946 GN=HDR1 ...	[more]
Q6K678	8.2e-50	59.90	Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HDR...	[more]

BLAST of Csor.00g004360 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593354.1	2.58e-194	100.00	Protein HEADING DATE REPRESSOR 1, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023004210.1	2.28e-182	96.32	protein HEADING DATE REPRESSOR 1 [Cucurbita maxima]	[more]
XP_023515206.1	1.12e-153	97.41	protein HEADING DATE REPRESSOR 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022959741.1	2.63e-134	98.51	protein HEADING DATE REPRESSOR 1-like isoform X2 [Cucurbita moschata]	[more]
KAG7025699.1	1.78e-119	90.59	Protein HEADING DATE REPRESSOR 1, partial [Cucurbita argyrosperma subsp. argyros...	[more]

BLAST of Csor.00g004360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KTY5	1.10e-182	96.32	protein HEADING DATE REPRESSOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111497606 PE=...	[more]
A0A6J1H5Q2	1.27e-134	98.51	protein HEADING DATE REPRESSOR 1-like isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1D3E7	1.64e-111	80.48	protein HEADING DATE REPRESSOR 1 OS=Momordica charantia OX=3673 GN=LOC111016948 ...	[more]
A0A6J1H766	2.74e-109	97.66	protein HEADING DATE REPRESSOR 1-like isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A5A7UUH2	1.33e-106	79.15	Protein HEADING DATE REPRESSOR 1-like isoform X2 OS=Cucumis melo var. makuwa OX=...	[more]

BLAST of Csor.00g004360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80940.1	4.9e-58	60.40	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT1G80940.2	5.5e-33	56.03	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 227..247
None	No IPR available	COILS	Coil	Coil	coord: 199..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..140
None	No IPR available	PANTHER	PTHR37205:SF1	F23A5.30 PROTEIN	coord: 75..269
IPR038864	Protein heading date repressor 1	PANTHER	PTHR37205	F23A5.30 PROTEIN	coord: 75..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g004360.m01	Csor.00g004360.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development