Csor.00g001180 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g001180
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Unknown protein
Location	Csor_Chr17: 10788653 .. 10789655 (+)
RNA-Seq Expression	Csor.00g001180
Synteny	Csor.00g001180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGTGTAACTCTGGCGGTGGCTCCACGAACAGACCCAAATGACGCGGTGGCGCCGCAGCACAAGCCGCTACGGCGGCAACAACAAGAGCAGAACTCGGTTGTTGGAGGGGTGATGGGGTCTCTCCGCGTCATTGAACTCCAACTTGTTGCTTTCATAATGGTGTTCTCTGCGAGCGGGCTTGTCCCCGTTCTCGACCTGATTTTCCCTGCCTTCACCTCCGCCTACCTCCTCTTGCTGGCACGGTTTGCATTCCCGTCTCACGGCCACGCGTCGGGCGCGTCGCAGGAGATCTTTCAGGCAATGTTAAATGTTTAGTACGCCCAACAAATTGGGAGTGTAGTTGGATTGATTTGACTGATTGATGTTTAAAACTGCGGTTTGTTGTTACAGGGGAGCAAGTTGTTTAGAGTGTACGTGGTGGTGGGGACCACGATAGGGCTGTTCCTGCCACTGGCATATGTATTGGGTGGGTTTGCGAGAAGTGACGAGCATGCGGTTCGGTCGGCGACTCCGCATCTGTTTTTGTTGTCGTTTCAGATTCTGACGGAGAATGTGATAAGTGGGTTGTCGTTGTTCTCGCCGCCGGTGAGAGCATTGGTGCCGGTTCTGTACACGGTGAGGAGGATTTTCGTGATCATGGATTGGATGAAGGATGTTTGGCTCAACAAAACCTTGCCGGCCAATGCACCTATCAACGTATTTTTCTTCTCCTCCTCCTCCTCCTCCTCTGTTCCTACAGTATTAATTACAATGGGTTTATTTAGTTTTATAAAAATGGCAGGACATAGCATGGTTTTGGTTCGGAAGGACATTAGCGGTGGCTAATTTTGCGTACTTCTGCATAAATCTATTTGGATTTTTAATCCCAAGATTCATTCCAAGGGCATTCCAAAGGTATTTTAAGGACCGAGATGACGAGACTCATGCCAAAATCCAAGAAGATAACCTCTCTTCCGCTCCCCCTAAATCTCACCCCTCCGATAAGAAGACCGATTGA

mRNA sequence

ATGTCGGGTGTAACTCTGGCGGTGGCTCCACGAACAGACCCAAATGACGCGGTGGCGCCGCAGCACAAGCCGCTACGGCGGCAACAACAAGAGCAGAACTCGGTTGTTGGAGGGGTGATGGGGTCTCTCCGCGTCATTGAACTCCAACTTGTTGCTTTCATAATGGTGTTCTCTGCGAGCGGGCTTGTCCCCGTTCTCGACCTGATTTTCCCTGCCTTCACCTCCGCCTACCTCCTCTTGCTGGCACGGTTTGCATTCCCGTCTCACGGCCACGCGTCGGGCGCGTCGCAGGAGATCTTTCAGGGGAGCAAGTTGTTTAGAGTGTACGTGGTGGTGGGGACCACGATAGGGCTGTTCCTGCCACTGGCATATGTATTGGGTGGGTTTGCGAGAAGTGACGAGCATGCGGTTCGGTCGGCGACTCCGCATCTGTTTTTGTTGTCGTTTCAGATTCTGACGGAGAATGTGATAAGTGGGTTGTCGTTGTTCTCGCCGCCGGTGAGAGCATTGGTGCCGGTTCTGTACACGGTGAGGAGGATTTTCGTGATCATGGATTGGATGAAGGATGTTTGGCTCAACAAAACCTTGCCGGCCAATGCACCTATCAACGACATAGCATGGTTTTGGTTCGGAAGGACATTAGCGGTGGCTAATTTTGCGTACTTCTGCATAAATCTATTTGGATTTTTAATCCCAAGATTCATTCCAAGGGCATTCCAAAGGTATTTTAAGGACCGAGATGACGAGACTCATGCCAAAATCCAAGAAGATAACCTCTCTTCCGCTCCCCCTAAATCTCACCCCTCCGATAAGAAGACCGATTGA

Coding sequence (CDS)

ATGTCGGGTGTAACTCTGGCGGTGGCTCCACGAACAGACCCAAATGACGCGGTGGCGCCGCAGCACAAGCCGCTACGGCGGCAACAACAAGAGCAGAACTCGGTTGTTGGAGGGGTGATGGGGTCTCTCCGCGTCATTGAACTCCAACTTGTTGCTTTCATAATGGTGTTCTCTGCGAGCGGGCTTGTCCCCGTTCTCGACCTGATTTTCCCTGCCTTCACCTCCGCCTACCTCCTCTTGCTGGCACGGTTTGCATTCCCGTCTCACGGCCACGCGTCGGGCGCGTCGCAGGAGATCTTTCAGGGGAGCAAGTTGTTTAGAGTGTACGTGGTGGTGGGGACCACGATAGGGCTGTTCCTGCCACTGGCATATGTATTGGGTGGGTTTGCGAGAAGTGACGAGCATGCGGTTCGGTCGGCGACTCCGCATCTGTTTTTGTTGTCGTTTCAGATTCTGACGGAGAATGTGATAAGTGGGTTGTCGTTGTTCTCGCCGCCGGTGAGAGCATTGGTGCCGGTTCTGTACACGGTGAGGAGGATTTTCGTGATCATGGATTGGATGAAGGATGTTTGGCTCAACAAAACCTTGCCGGCCAATGCACCTATCAACGACATAGCATGGTTTTGGTTCGGAAGGACATTAGCGGTGGCTAATTTTGCGTACTTCTGCATAAATCTATTTGGATTTTTAATCCCAAGATTCATTCCAAGGGCATTCCAAAGGTATTTTAAGGACCGAGATGACGAGACTCATGCCAAAATCCAAGAAGATAACCTCTCTTCCGCTCCCCCTAAATCTCACCCCTCCGATAAGAAGACCGATTGA

Protein sequence

MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSASGLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRVYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD

Homology

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BLAST of Csor.00g001180 vs. NCBI nr
Match: KAG6576125.1 (hypothetical protein SDJN03_26764, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 538 bits (1386), Expect = 1.01e-192
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS
Sbjct: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60

Query: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRVYVVVGTTIGLFL 120
           GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRVYVVVGTTIGLFL
Sbjct: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRVYVVVGTTIGLFL 120

Query: 121 PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI 180
           PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI
Sbjct: 121 PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI 180

Query: 181 FVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQ 240
           FVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQ
Sbjct: 181 FVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQ 240

Query: 241 RYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 274
           RYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD
Sbjct: 241 RYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 274

[Close]

BLAST of Csor.00g001180 vs. NCBI nr
Match: XP_022954375.1 (uncharacterized protein LOC111456631 [Cucurbita moschata])

HSP 1 Score: 536 bits (1382), Expect = 4.11e-192
Identity = 272/274 (99.27%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS
Sbjct: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60

Query: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRVYVVVGTTIGLFL 120
           GLVP+LDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFR+YVVVGTTIGLFL
Sbjct: 61  GLVPILDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRMYVVVGTTIGLFL 120

Query: 121 PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI 180
           PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI
Sbjct: 121 PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI 180

Query: 181 FVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQ 240
           FVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQ
Sbjct: 181 FVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQ 240

Query: 241 RYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 274
           RYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD
Sbjct: 241 RYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 274

[Close]

BLAST of Csor.00g001180 vs. NCBI nr
Match: KAG7014643.1 (hypothetical protein SDJN02_24822, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 531 bits (1368), Expect = 6.49e-190
Identity = 273/278 (98.20%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS
Sbjct: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60

Query: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQ----GSKLFRVYVVVGTTI 120
           GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQ    GSKLFR+YVVVGTTI
Sbjct: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQAMLNGSKLFRMYVVVGTTI 120

Query: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180
           GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT
Sbjct: 121 GLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYT 180

Query: 181 VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240
           VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP
Sbjct: 181 VRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIP 240

Query: 241 RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 274
           RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD
Sbjct: 241 RAFQRYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 278

[Close]

BLAST of Csor.00g001180 vs. NCBI nr
Match: XP_023550142.1 (uncharacterized protein LOC111808420 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 529 bits (1363), Expect = 3.24e-189
Identity = 269/274 (98.18%), Postives = 272/274 (99.27%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGVTLAVAPRTDPNDAVAPQ KPL RQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS
Sbjct: 1   MSGVTLAVAPRTDPNDAVAPQQKPLWRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60

Query: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRVYVVVGTTIGLFL 120
           GLVP+LDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFR+YVVVGTTIGLFL
Sbjct: 61  GLVPILDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRMYVVVGTTIGLFL 120

Query: 121 PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI 180
           PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI
Sbjct: 121 PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI 180

Query: 181 FVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQ 240
           FVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAF+
Sbjct: 181 FVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFE 240

Query: 241 RYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 274
           RYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD
Sbjct: 241 RYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 274

[Close]

BLAST of Csor.00g001180 vs. NCBI nr
Match: XP_022991374.1 (uncharacterized protein LOC111488027 [Cucurbita maxima])

HSP 1 Score: 515 bits (1326), Expect = 1.47e-183
Identity = 264/275 (96.00%), Postives = 269/275 (97.82%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGVTLAVAPRTDPNDAV PQ KPLRRQQQEQN+VVGGVMGSLRVIELQLVAFIMVFSAS
Sbjct: 1   MSGVTLAVAPRTDPNDAVPPQQKPLRRQQQEQNTVVGGVMGSLRVIELQLVAFIMVFSAS 60

Query: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRVYVVVGTTIGLFL 120
           GLVP+LDL FPAFTSAYLLLLARFAFPS GHASGASQEIFQGSKLFR+YVVVGTTIGLFL
Sbjct: 61  GLVPILDLTFPAFTSAYLLLLARFAFPSRGHASGASQEIFQGSKLFRMYVVVGTTIGLFL 120

Query: 121 PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI 180
           PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI
Sbjct: 121 PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI 180

Query: 181 FVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQ 240
           FVIMDWMKDVWLNKTL ANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAF+
Sbjct: 181 FVIMDWMKDVWLNKTLAANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFE 240

Query: 241 RYFKDRD-DETHAKIQEDNLSSAPPKSHPSDKKTD 274
           RYFKDRD DETHAKI+EDNLSSAPPKSHPSDKKTD
Sbjct: 241 RYFKDRDEDETHAKIREDNLSSAPPKSHPSDKKTD 275

[Close]

BLAST of Csor.00g001180 vs. ExPASy TrEMBL
Match: A0A6J1GS90 (uncharacterized protein LOC111456631 OS=Cucurbita moschata OX=3662 GN=LOC111456631 PE=4 SV=1)

HSP 1 Score: 536 bits (1382), Expect = 1.99e-192
Identity = 272/274 (99.27%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS
Sbjct: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60

Query: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRVYVVVGTTIGLFL 120
           GLVP+LDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFR+YVVVGTTIGLFL
Sbjct: 61  GLVPILDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRMYVVVGTTIGLFL 120

Query: 121 PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI 180
           PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI
Sbjct: 121 PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI 180

Query: 181 FVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQ 240
           FVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQ
Sbjct: 181 FVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQ 240

Query: 241 RYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 274
           RYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD
Sbjct: 241 RYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 274

[Close]

BLAST of Csor.00g001180 vs. ExPASy TrEMBL
Match: A0A6J1JUQ0 (uncharacterized protein LOC111488027 OS=Cucurbita maxima OX=3661 GN=LOC111488027 PE=4 SV=1)

HSP 1 Score: 515 bits (1326), Expect = 7.10e-184
Identity = 264/275 (96.00%), Postives = 269/275 (97.82%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGVTLAVAPRTDPNDAV PQ KPLRRQQQEQN+VVGGVMGSLRVIELQLVAFIMVFSAS
Sbjct: 1   MSGVTLAVAPRTDPNDAVPPQQKPLRRQQQEQNTVVGGVMGSLRVIELQLVAFIMVFSAS 60

Query: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRVYVVVGTTIGLFL 120
           GLVP+LDL FPAFTSAYLLLLARFAFPS GHASGASQEIFQGSKLFR+YVVVGTTIGLFL
Sbjct: 61  GLVPILDLTFPAFTSAYLLLLARFAFPSRGHASGASQEIFQGSKLFRMYVVVGTTIGLFL 120

Query: 121 PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI 180
           PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI
Sbjct: 121 PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI 180

Query: 181 FVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQ 240
           FVIMDWMKDVWLNKTL ANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAF+
Sbjct: 181 FVIMDWMKDVWLNKTLAANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFE 240

Query: 241 RYFKDRD-DETHAKIQEDNLSSAPPKSHPSDKKTD 274
           RYFKDRD DETHAKI+EDNLSSAPPKSHPSDKKTD
Sbjct: 241 RYFKDRDEDETHAKIREDNLSSAPPKSHPSDKKTD 275

[Close]

BLAST of Csor.00g001180 vs. ExPASy TrEMBL
Match: A0A1S3CB68 (uncharacterized protein LOC103498861 OS=Cucumis melo OX=3656 GN=LOC103498861 PE=4 SV=1)

HSP 1 Score: 454 bits (1169), Expect = 7.67e-160
Identity = 241/282 (85.46%), Postives = 252/282 (89.36%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAV----APQHKP-LRRQ-QQEQNSVVGGVMGSLRVIELQLVAFI 60
           MSGV+LAV PRT+ NDA     A Q KP LRRQ QQEQNSVVGGVMGSLRVIELQLVAFI
Sbjct: 1   MSGVSLAVGPRTESNDAAELKRAQQLKPPLRRQHQQEQNSVVGGVMGSLRVIELQLVAFI 60

Query: 61  MVFSASGLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRVYVVVGT 120
           MVFSASGLVP LDL+FPAFTSAYLLLLARFAFPSHGH S  S EIFQGS LFR+YVVVGT
Sbjct: 61  MVFSASGLVPFLDLVFPAFTSAYLLLLARFAFPSHGHTSTGSPEIFQGSTLFRMYVVVGT 120

Query: 121 TIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVL 180
           T+GLFLPLAYVLGGFAR DEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP+L
Sbjct: 121 TVGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLL 180

Query: 181 YTVRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRF 240
           YTVRRIFVIMDW KDVWLNK LPANAPI DI WFWFGRTLAVANFAYFCINLFGFLIPRF
Sbjct: 181 YTVRRIFVIMDWTKDVWLNKALPANAPIKDIGWFWFGRTLAVANFAYFCINLFGFLIPRF 240

Query: 241 IPRAFQRYFKDRDDETHAKIQEDNLSSAPP--KSHPSDKKTD 274
           +PRAF++YFK+R DETHAK QED LSSA    KS PSDKK+D
Sbjct: 241 LPRAFEKYFKERSDETHAKFQEDKLSSATAAAKSQPSDKKSD 282

[Close]

BLAST of Csor.00g001180 vs. ExPASy TrEMBL
Match: A0A0A0KAF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094170 PE=4 SV=1)

HSP 1 Score: 454 bits (1168), Expect = 1.13e-159
Identity = 238/283 (84.10%), Postives = 252/283 (89.05%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHK-------PLRRQ-QQEQNSVVGGVMGSLRVIELQLVA 60
           MSGVTLA+ P TD NDA  P+ K       PLR+Q QQEQN+VVGGVMGSLRVIELQLVA
Sbjct: 1   MSGVTLAMGPGTDSNDAAMPELKRAQQLKPPLRQQHQQEQNTVVGGVMGSLRVIELQLVA 60

Query: 61  FIMVFSASGLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRVYVVV 120
           FIMVFSASGLVP LDL+FPAFTSAYLLLLARFAFPSHGH S  S EIFQ S LFR+YVVV
Sbjct: 61  FIMVFSASGLVPFLDLVFPAFTSAYLLLLARFAFPSHGHTSTRSPEIFQASTLFRMYVVV 120

Query: 121 GTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP 180
           GTTIGLFLPLAYVLGGFAR DEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP
Sbjct: 121 GTTIGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP 180

Query: 181 VLYTVRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIP 240
           +LYTVRRIFVIMDWMKDVWLNK+LPANAPI DI WFWFGRTLAVANFAYFCINLFGFLIP
Sbjct: 181 LLYTVRRIFVIMDWMKDVWLNKSLPANAPIKDIGWFWFGRTLAVANFAYFCINLFGFLIP 240

Query: 241 RFIPRAFQRYFKDRDDETHAKIQEDNLSSAPP-KSHPSDKKTD 274
           RF+PRAF++YFK+RDDE+HAK  ED LSSA   KS PSDKK+D
Sbjct: 241 RFLPRAFEKYFKERDDESHAKFHEDKLSSAAAAKSQPSDKKSD 283

[Close]

BLAST of Csor.00g001180 vs. ExPASy TrEMBL
Match: A0A5D3DMD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002220 PE=4 SV=1)

HSP 1 Score: 451 bits (1161), Expect = 1.27e-158
Identity = 240/282 (85.11%), Postives = 251/282 (89.01%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAV----APQHKP-LRRQ-QQEQNSVVGGVMGSLRVIELQLVAFI 60
           MSGV+LAV PRT+ NDA     A Q KP LRRQ QQEQNSVVGGVMGSLRVIELQLVAFI
Sbjct: 1   MSGVSLAVGPRTESNDAAELKRAQQLKPPLRRQHQQEQNSVVGGVMGSLRVIELQLVAFI 60

Query: 61  MVFSASGLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRVYVVVGT 120
           MVFSASGLVP LDL+FPAFTSAYLLLLARFAFPSHG  S  S EIFQGS LFR+YVVVGT
Sbjct: 61  MVFSASGLVPFLDLVFPAFTSAYLLLLARFAFPSHGQTSTGSPEIFQGSTLFRMYVVVGT 120

Query: 121 TIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVL 180
           T+GLFLPLAYVLGGFAR DEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVP+L
Sbjct: 121 TVGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLL 180

Query: 181 YTVRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRF 240
           YTVRRIFVIMDW KDVWLNK LPANAPI DI WFWFGRTLAVANFAYFCINLFGFLIPRF
Sbjct: 181 YTVRRIFVIMDWTKDVWLNKALPANAPIKDIGWFWFGRTLAVANFAYFCINLFGFLIPRF 240

Query: 241 IPRAFQRYFKDRDDETHAKIQEDNLSSAPP--KSHPSDKKTD 274
           +PRAF++YFK+R DETHAK QED LSSA    KS PSDKK+D
Sbjct: 241 LPRAFEKYFKERSDETHAKFQEDKLSSATAAAKSQPSDKKSD 282

[Close]

BLAST of Csor.00g001180 vs. TAIR 10
Match: AT1G27990.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 344.4 bits (882), Expect = 8.7e-95
Identity = 185/274 (67.52%), Postives = 215/274 (78.47%), Query Frame = 0


Query: 1   MSGVTLAVAPRTDPNDAVAPQHKPLRRQQQEQNSVVGGVMGSLRVIELQLVAFIMVFSAS 60
           MSGV+LAV PRTD +   +   K             GG+MGSLRVIELQLVAFI+VFSAS
Sbjct: 1   MSGVSLAVGPRTDVDKTASSSEKGRWSGMTAIGGGSGGLMGSLRVIELQLVAFILVFSAS 60

Query: 61  GLVPVLDLIFPAFTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRVYVVVGTTIGLFL 120
           GLVP+LD++FPAF S Y++ L+R AFPSHG  S AS E+F+GSKLFR+YV+ GTTIGLFL
Sbjct: 61  GLVPILDMLFPAFASIYIIALSRLAFPSHG-VSTASPEVFRGSKLFRLYVISGTTIGLFL 120

Query: 121 PLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRI 180
           PLAYVLGGFAR D+HAVRSATPHLFLLS QILTENVISGLSLFSPPVRALVP+LYTV RI
Sbjct: 121 PLAYVLGGFARGDDHAVRSATPHLFLLSCQILTENVISGLSLFSPPVRALVPLLYTVWRI 180

Query: 181 FVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQ 240
           FVI+ W KDVW NK+LP NA  N + WFWFGR LA+AN  YF +NL  FLIPRF+PRAF+
Sbjct: 181 FVIIGWSKDVWFNKSLPINATPNVVTWFWFGRYLALANLGYFGVNLLCFLIPRFLPRAFE 240

Query: 241 RYFKDRDDETHAKIQEDNLSSAPPKSHPSDKKTD 275
           +YF++R DE  AK QED      P+S PS+ K+D
Sbjct: 241 QYFRER-DEILAKSQEDKPVQV-PRSKPSNHKSD 271

[Close]

BLAST of Csor.00g001180 vs. TAIR 10
Match: AT5G52420.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 141.0 bits (354), Expect = 1.5e-33
Identity = 79/237 (33.33%), Postives = 127/237 (53.59%), Query Frame = 0


Query: 15  NDAVAPQHKPLRRQQQEQNSV--VGGVMGSLRVIELQLVAFIMVFSASGLVPVLDLIFPA 74
           ND   P+ +    Q Q  ++V   G   G     +L ++A I+V SASGLV + D IF  
Sbjct: 10  NDITLPKEEEEEHQTQSTSTVSSTGKPAGFFSFRQLNILAIIIVLSASGLVTIQDFIFTI 69

Query: 75  FTSAYLLLLARFAFPSHGHASGASQEIFQGSKLFRVYVVVGTTIGLFLPLAYVLGGFARS 134
            T  Y   L++  FP H + +  +      +K+FR+YV     +GL +P+ Y+  G    
Sbjct: 70  LTLIYFFFLSKLIFPPHNNPNRDAPLTSSTNKIFRIYVTAAGIVGLIIPICYIFEGIVED 129

Query: 135 DEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPVLYTVRRIFVIMDWMKDVWL 194
           D++ V +A PH+FLL+ QI  E + +    FS P R LVP++Y  RR+  +++W+   + 
Sbjct: 130 DKNGVSAAAPHVFLLASQIFMEGLATMFG-FSAPARILVPIVYNARRVLTLVEWIMSEFS 189

Query: 195 NKTLPANAPINDIAWFWFGRTLAVANFAYFCINLFGFLIPRFIPRAFQRYF-KDRDD 249
            + +        +   + G+ LA AN   +  NLFG LIP ++PRAF+RY+  D++D
Sbjct: 190 REDVTGTVSARRM---YAGKVLAAANLGIWSFNLFGVLIPVYLPRAFKRYYGSDKED 242

[Close]

BLAST of Csor.00g001180 vs. TAIR 10
Match: AT5G23920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 3.0e-23
Identity = 74/206 (35.92%), Postives = 109/206 (52.91%), Query Frame = 0


Query: 47  ELQLVAFIMVFSASGLVPVLDLIFPAFTSAYLL-LLARFAFPSHGHASGASQEIFQGSKL 106
           +L  ++F+++ +A GLV + ++ F      YL   L+RFAFP         +     +KL
Sbjct: 32  QLVFLSFMILLAAKGLVGIGEIAFVILCYIYLYEFLSRFAFP-RKQTEQKKRLSNPKNKL 91

Query: 107 FRVYVVVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLS-LFS 166
           F+ Y +    IGL  PL Y+  G  R D H   +A PHLFLLS Q  TE +  G S  +S
Sbjct: 92  FQAYFLATAIIGLLFPLCYIGDGIYRGDIHGAGAAAPHLFLLSGQAFTEPI--GFSDKYS 151

Query: 167 PPVRALVPVLYTVRRIFVIMDWMKDVWLNKTLPANAPINDIAWFWFGRTLAVANFAYFCI 226
            P+  L PV Y  RRIF ++DW+K  + +   P   P+      + GR +A  N   +  
Sbjct: 152 MPIGILGPVFYNARRIFALLDWVKAEFSDTQRP-GGPLR----LYGGRVIASVNTVMWFY 211

Query: 227 NLFGFLIPRFIPRAFQRYFK--DRDD 249
           NLFG L+P F+PR+ + YF   ++DD
Sbjct: 212 NLFGLLLPVFLPRSCEIYFSGDNKDD 229

The following BLAST results are available for this feature:

BLAST of Csor.00g001180 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g001180 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6576125.1	1.01e-192	100.00	hypothetical protein SDJN03_26764, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022954375.1	4.11e-192	99.27	uncharacterized protein LOC111456631 [Cucurbita moschata]	[more]
KAG7014643.1	6.49e-190	98.20	hypothetical protein SDJN02_24822, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023550142.1	3.24e-189	98.18	uncharacterized protein LOC111808420 [Cucurbita pepo subsp. pepo]	[more]
XP_022991374.1	1.47e-183	96.00	uncharacterized protein LOC111488027 [Cucurbita maxima]	[more]

BLAST of Csor.00g001180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GS90	1.99e-192	99.27	uncharacterized protein LOC111456631 OS=Cucurbita moschata OX=3662 GN=LOC1114566...	[more]
A0A6J1JUQ0	7.10e-184	96.00	uncharacterized protein LOC111488027 OS=Cucurbita maxima OX=3661 GN=LOC111488027...	[more]
A0A1S3CB68	7.67e-160	85.46	uncharacterized protein LOC103498861 OS=Cucumis melo OX=3656 GN=LOC103498861 PE=...	[more]
A0A0A0KAF1	1.13e-159	84.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094170 PE=4 SV=1	[more]
A0A5D3DMD1	1.27e-158	85.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Csor.00g001180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27990.1	8.7e-95	67.52	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G52420.1	1.5e-33	33.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G23920.1	3.0e-23	35.92	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR33829:SF2	OSJNBA0044M19.10 PROTEIN	coord: 1..273
None	No IPR available	PANTHER	PTHR33829	OSJNBA0044M19.10 PROTEIN	coord: 1..273

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g001180.m01	Csor.00g001180.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane