Homology
BLAST of Csor.00g000250 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 357.1 bits (915), Expect = 4.0e-97
Identity = 209/605 (34.55%), Postives = 333/605 (55.04%), Query Frame = 0
Query: 34 LRQIHGRVFRLLKHQDNLIATRLIGH---YPHSVG----IRVFNQLLRPNIFPCNAIIRV 93
LR IH ++ ++ H N ++LI PH G I VF + PN+ N + R
Sbjct: 49 LRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG 108
Query: 94 LAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVLKMGYLGD 153
A S+ A ++ + L L PN +TF F+LK+ +S +Q+H HVLK+G D
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168
Query: 154 SFISNALLGVYAKGLKDMGSAHNMFDEMSEREM--------------------------- 213
++ +L+ +Y + + + AH +FD+ R++
Sbjct: 169 LYVHTSLISMYVQNGR-LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 228
Query: 214 ---ACCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEK- 273
W +I+GYA G ++AL LF M+K N++P++ TMV+V+SAC++ E+ +
Sbjct: 229 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 288
Query: 274 ---WVAELTQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMIN 333
W+ + + F S +N L+ LY K G++E + F E + + I WN++I
Sbjct: 289 VHLWIDD-----HGFGSNLKIVN-ALIDLYSKCGELETACGLF-ERLPYKDVISWNTLIG 348
Query: 334 AYFQNGCPVEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRK 393
Y EAL L++ ML + PN VTM+++L ACA +G + +GR +H ++ K
Sbjct: 349 GYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYID-KRLK 408
Query: 394 GIIASNKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKL 453
G+ ++ L T+LIDMY K G +E A QVF+ ++ K + S+NAMI G A++G+AD + L
Sbjct: 409 GVTNASS-LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 468
Query: 454 FSQMQESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLA 513
FS+M++ I+P TF+GLLSACSHSG L+ GR IF M Y +P L+HY C IDLL
Sbjct: 469 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 528
Query: 514 RAGCVEDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVM 573
+G ++A E+++ M EP+ +W SLL+ C +H EL ++ L++++PE+ YV+
Sbjct: 529 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 588
Query: 574 QANSFATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYST 598
+N +A+ +W++V+ R + +KG+ K PG S I ID +VHEF K HP +Y
Sbjct: 589 LSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM 642
BLAST of Csor.00g000250 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 337.8 bits (865), Expect = 2.5e-91
Identity = 202/621 (32.53%), Postives = 333/621 (53.62%), Query Frame = 0
Query: 24 LLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPHS------VGIRVFNQLLRPNI 83
L++ ++ +L+Q HG + R D A++L S +VF+++ +PN
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 84 FPCNAIIRVLAESNCSFLAFSIFKSLKRLSLS---PNDFTFSFLLKAFHRSSHSPNVKQV 143
F N +IR A L SI+ L +S S PN +TF FL+KA S + +
Sbjct: 96 FAWNTLIRAYASGPDPVL--SIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 155
Query: 144 HTHVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMACCWTPLIAGYAHMG 203
H +K D F++N+L+ Y D+ SA +F + E+++ W +I G+ G
Sbjct: 156 HGMAVKSAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEKDVV-SWNSMINGFVQKG 215
Query: 204 LAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFDSCCDSI 263
+KAL LF M E+++ TMV VLSAC+K++ E + Q+ + + ++
Sbjct: 216 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR------QVCSYIEENRVNV 275
Query: 264 NIVL----VYLYGKWGKIEKSEEKFNEIVDK----------------------------- 323
N+ L + +Y K G IE ++ F+ + +K
Sbjct: 276 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 335
Query: 324 -RSAIVWNSMINAYFQNGCPVEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGR 383
+ + WN++I+AY QNG P EAL ++ + + K N +T+V+ LSACAQ+G L+LGR
Sbjct: 336 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 395
Query: 384 RVHEALEHSGRKGIIASNKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGL 443
+H ++ G I N + +ALI MY K G LEK+++VF+ + +DV ++AMI GL
Sbjct: 396 WIHSYIKKHG----IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGL 455
Query: 444 AVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPS 503
A++G +EA+ +F +MQE+++KP TF + ACSH+G +++ +F QM + Y P
Sbjct: 456 AMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPE 515
Query: 504 LDHYACYIDLLARAGCVEDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLV 563
HYAC +D+L R+G +E A++ + MP P+ VW +LL C +H+ LA +L+
Sbjct: 516 EKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLL 575
Query: 564 EVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSAT 602
E++P + +V+ +N +A +W++VS LR MR G+ K+PG S I IDG++HEF S
Sbjct: 576 ELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGD 635
BLAST of Csor.00g000250 vs. ExPASy Swiss-Prot
Match:
Q9SR82 (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H84 PE=3 SV=1)
HSP 1 Score: 335.5 bits (859), Expect = 1.3e-90
Identity = 191/579 (32.99%), Postives = 310/579 (53.54%), Query Frame = 0
Query: 32 SRLRQIHGRVFRLLKHQD----NLIATRLIGHYPHSVGIRVFNQLLRPNIFPCNAIIRVL 91
+ L+QIH + H D NL+ R + +F+ PNIF N++I
Sbjct: 27 NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86
Query: 92 AESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVLKMGYLGDS 151
++ +F S+++ L + FTF +LKA R+S +H+ V+K G+ D
Sbjct: 87 VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146
Query: 152 FISNALLGVYAKGLKDMGSAHNMFDEMSEREMACCWTPLIAGYAHMGLAEKALLLFVMMI 211
+LL +Y+ G + AH +FDE+ +R + WT L +GY G +A+ LF M+
Sbjct: 147 AAMTSLLSIYS-GSGRLNDAHKLFDEIPDRSVV-TWTALFSGYTTSGRHREAIDLFKKMV 206
Query: 212 KENIQPEDDTMVSVLSACSKLQIAEIEKWVA----ELTQLVNEFDSCCDSINIVLVYLYG 271
+ ++P+ +V VLSAC + + +W+ E+ N F + LV LY
Sbjct: 207 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF------VRTTLVNLYA 266
Query: 272 KWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALTLYRLMLENPHCKPNHVTM 331
K GK+EK+ F+ +V+K + W++MI Y N P E + L+ ML+ + KP+ ++
Sbjct: 267 KCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQE-NLKPDQFSI 326
Query: 332 VTVLSACAQIGDLQLGRRVHEALEHSGRKGIIASNKMLATALIDMYCKSGSLEKAKQVFH 391
V LS+CA +G L LG ++ + +N +A ALIDMY K G++ + +VF
Sbjct: 327 VGFLSSCASLGALDLGEWGISLID----RHEFLTNLFMANALIDMYAKCGAMARGFEVFK 386
Query: 392 ELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFLEQ 451
E+ KD++ NA I GLA NG + +F Q ++ I P TF+GLL C H+G ++
Sbjct: 387 EMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQD 446
Query: 452 GRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNFVWSSLLRGC 511
G + F ++ Y+ +++HY C +DL RAG ++DA ++ MP PN VW +LL GC
Sbjct: 447 GLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 506
Query: 512 LLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKGVHKQPG 571
L +LA V K+L+ ++P ++ YV +N ++ +WD+ + +R M +KG+ K PG
Sbjct: 507 RLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPG 566
Query: 572 RSWISIDGIVHEFFSATKSHPCVDLLYSTLSELERQMKL 603
SWI ++G VHEF + KSHP D +Y+ L +L +M+L
Sbjct: 567 YSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
BLAST of Csor.00g000250 vs. ExPASy Swiss-Prot
Match:
Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 334.3 bits (856), Expect = 2.8e-90
Identity = 196/587 (33.39%), Postives = 333/587 (56.73%), Query Frame = 0
Query: 22 SDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPHSVG-----IRVFNQLLRPN 81
+ L+ + ++L+QIH R+ L + T+LI H S G +VF+ L RP
Sbjct: 25 ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI-HASSSFGDITFARQVFDDLPRPQ 84
Query: 82 IFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHT 141
IFP NAIIR + +N A ++ +++ +SP+ FTF LLKA SH + VH
Sbjct: 85 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 144
Query: 142 HVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMA-CCWTPLIAGYAHMGL 201
V ++G+ D F+ N L+ +YAK + +GSA +F+ + E WT +++ YA G
Sbjct: 145 QVFRLGFDADVFVQNGLIALYAK-CRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 204
Query: 202 AEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWV-AELTQLVNEFDSCCDSI 261
+AL +F M K +++P+ +VSVL+A + LQ + + + A + ++ E + +
Sbjct: 205 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE---PDL 264
Query: 262 NIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALTLYRLMLENP 321
I L +Y K G++ ++ F++ + + I+WN+MI+ Y +NG EA+ ++ M+ N
Sbjct: 265 LISLNTMYAKCGQVATAKILFDK-MKSPNLILWNAMISGYAKNGYAREAIDMFHEMI-NK 324
Query: 322 HCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRKGIIASNKMLATALIDMYCKSGS 381
+P+ +++ + +SACAQ+G L+ R ++E + S + + +++ALIDM+ K GS
Sbjct: 325 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR----DDVFISSALIDMFAKCGS 384
Query: 382 LEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSA 441
+E A+ VF + +DV+ ++AMI+G ++G+A EA+ L+ M+ + P TF+GLL A
Sbjct: 385 VEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 444
Query: 442 CSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNF 501
C+HSG + +G F +MA + +P HYAC IDLL RAG ++ A EV+ MP +P
Sbjct: 445 CNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVT 504
Query: 502 VWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMR 561
VW +LL C H EL + +++L +DP ++ YV +N +A WD V+ +R M+
Sbjct: 505 VWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMK 564
Query: 562 EKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYSTLSELERQMK 602
EKG++K G SW+ + G + F KSHP + + + +E ++K
Sbjct: 565 EKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLK 599
BLAST of Csor.00g000250 vs. ExPASy Swiss-Prot
Match:
Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)
HSP 1 Score: 332.4 bits (851), Expect = 1.1e-89
Identity = 189/573 (32.98%), Postives = 319/573 (55.67%), Query Frame = 0
Query: 30 NSSRLRQIHGRVFRLLKHQDNLIATRLIGHY----PHSVGIRVFNQLLRPNIFPCNAIIR 89
N ++++Q+H ++ R H+D IA +LI ++ +RVFNQ+ PN+ CN++IR
Sbjct: 31 NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90
Query: 90 VLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVLKMGYLG 149
A+++ + AF +F ++R L ++FT+ FLLKA S P VK +H H+ K+G
Sbjct: 91 AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150
Query: 150 DSFISNALLGVYAK-GLKDMGSAHNMFDEMSEREMACCWTPLIAGYAHMGLAEKALLLFV 209
D ++ NAL+ Y++ G + A +F++MSER+ W ++ G G A LF
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD-TVSWNSMLGGLVKAGELRDARRLFD 210
Query: 210 MMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFDSCCDSINIVLVYLYGK 269
M + ++ +TM+ + C ++ A EL + + E ++ S +V Y K
Sbjct: 211 EMPQRDL-ISWNTMLDGYARCREMSKA------FELFEKMPERNTVSWS---TMVMGYSK 270
Query: 270 WGKIEKSEEKFNEI-VDKRSAIVWNSMINAYFQNGCPVEALTLYRLMLENPHCKPNHVTM 329
G +E + F+++ + ++ + W +I Y + G EA L M+ + K + +
Sbjct: 271 AGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS-GLKFDAAAV 330
Query: 330 VTVLSACAQIGDLQLGRRVHEALEHSGRKGIIASNKMLATALIDMYCKSGSLEKAKQVFH 389
+++L+AC + G L LG R+H L+ S + SN + AL+DMY K G+L+KA VF+
Sbjct: 331 ISILAACTESGLLSLGMRIHSILKRSN----LGSNAYVLNALLDMYAKCGNLKKAFDVFN 390
Query: 390 ELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFLEQ 449
++ KD++S+N M+ GL V+G EA++LFS+M+ I+P TFI +L +C+H+G +++
Sbjct: 391 DIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDE 450
Query: 450 GRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNFVWSSLLRGC 509
G F M Y P ++HY C +DLL R G +++A++VV TMP EPN +W +LL C
Sbjct: 451 GIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGAC 510
Query: 510 LLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKGVHKQPG 569
+H+ ++A+ V LV++DP Y + +N +A W+ V+ +R M+ GV K G
Sbjct: 511 RMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSG 570
Query: 570 RSWISIDGIVHEFFSATKSHPCVDLLYSTLSEL 597
S + ++ +HEF KSHP D +Y L L
Sbjct: 571 ASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
BLAST of Csor.00g000250 vs. NCBI nr
Match:
KAG6571934.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1219 bits (3155), Expect = 0.0
Identity = 605/605 (100.00%), Postives = 605/605 (100.00%), Query Frame = 0
Query: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY
Sbjct: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
Query: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK
Sbjct: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMA 180
AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMA
Sbjct: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMA 180
Query: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL
Sbjct: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
Query: 241 TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP 300
TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP
Sbjct: 241 TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP 300
Query: 301 VEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRKGIIASNKM 360
VEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRKGIIASNKM
Sbjct: 301 VEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRKGIIASNKM 360
Query: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD
Sbjct: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
Query: 421 IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDA 480
IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDA
Sbjct: 421 IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDA 480
Query: 481 LEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATD 540
LEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATD
Sbjct: 481 LEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATD 540
Query: 541 LQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYSTLSELERQM 600
LQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYSTLSELERQM
Sbjct: 541 LQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYSTLSELERQM 600
Query: 601 KLAIP 605
KLAIP
Sbjct: 601 KLAIP 605
BLAST of Csor.00g000250 vs. NCBI nr
Match:
KAG7011622.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1207 bits (3123), Expect = 0.0
Identity = 597/605 (98.68%), Postives = 604/605 (99.83%), Query Frame = 0
Query: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHG+VFRLLKHQDNLIATRLIGHY
Sbjct: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGQVFRLLKHQDNLIATRLIGHY 60
Query: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK
Sbjct: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMA 180
AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYA+GLKDMGSAHNMFDEMSEREMA
Sbjct: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMA 180
Query: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL
Sbjct: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
Query: 241 TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP 300
TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP
Sbjct: 241 TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP 300
Query: 301 VEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRKGIIASNKM 360
VEALTL+RLMLENP CKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGR+GIIASNKM
Sbjct: 301 VEALTLFRLMLENPQCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRRGIIASNKM 360
Query: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD
Sbjct: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
Query: 421 IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDA 480
IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSL+HYACYIDLLARAGCVEDA
Sbjct: 421 IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDA 480
Query: 481 LEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATD 540
LEVVSTMPFEPN+FVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATD
Sbjct: 481 LEVVSTMPFEPNSFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATD 540
Query: 541 LQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYSTLSELERQM 600
LQWDDVSALRWFMREKGVHKQPGRSWIS+DGIVHEFFSATKSHPCVDLLYSTLSELERQM
Sbjct: 541 LQWDDVSALRWFMREKGVHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYSTLSELERQM 600
Query: 601 KLAIP 605
KLAIP
Sbjct: 601 KLAIP 605
BLAST of Csor.00g000250 vs. NCBI nr
Match:
XP_022952095.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 1198 bits (3100), Expect = 0.0
Identity = 594/605 (98.18%), Postives = 600/605 (99.17%), Query Frame = 0
Query: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
MVNGKSYAMRSSCIN EFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY
Sbjct: 1 MVNGKSYAMRSSCINLEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
Query: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
P+SVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK
Sbjct: 61 PYSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMA 180
AFHRSSHSPNVKQVHTHV+KMGYLGDSFISNALLGVYA+GLKDMGSAHNMFDEMSEREMA
Sbjct: 121 AFHRSSHSPNVKQVHTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMA 180
Query: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
CCWT LIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL
Sbjct: 181 CCWTSLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
Query: 241 TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP 300
TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP
Sbjct: 241 TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP 300
Query: 301 VEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRKGIIASNKM 360
VEALTL+RLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEH GR+GIIASNKM
Sbjct: 301 VEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKM 360
Query: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD
Sbjct: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
Query: 421 IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDA 480
IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDA
Sbjct: 421 IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDA 480
Query: 481 LEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATD 540
LEVVSTMPFEPNNFVWSSLLRGCLLHSRFELAR+VSKKLVEVDPESSAGYVMQANSFATD
Sbjct: 481 LEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATD 540
Query: 541 LQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYSTLSELERQM 600
LQWDDVSALRWFMREKGVHKQPGRSWISIDG VHEFFSATKSHPCVDLLYSTLSELERQM
Sbjct: 541 LQWDDVSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHPCVDLLYSTLSELERQM 600
Query: 601 KLAIP 605
KL IP
Sbjct: 601 KLVIP 605
BLAST of Csor.00g000250 vs. NCBI nr
Match:
XP_022972521.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 1177 bits (3045), Expect = 0.0
Identity = 584/605 (96.53%), Postives = 595/605 (98.35%), Query Frame = 0
Query: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY
Sbjct: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
Query: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK
Sbjct: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMA 180
AFHRSSHSPNVKQVHT V+KMGYLGDSFISNALLGVYA+GL+DM SAHNMFDEMSEREMA
Sbjct: 121 AFHRSSHSPNVKQVHTQVMKMGYLGDSFISNALLGVYARGLQDMCSAHNMFDEMSEREMA 180
Query: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
CCWT LIAGYAHMGL EKALLLFVMMIKENIQP DDTMVSVLSACSKLQIAEIEKWVAEL
Sbjct: 181 CCWTSLIAGYAHMGLVEKALLLFVMMIKENIQPVDDTMVSVLSACSKLQIAEIEKWVAEL 240
Query: 241 TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP 300
TQL+NEF SC DSINIVLVYLYGKWGKIEKSEEKF+EIVDKRSAIVWNSMINAYFQNGCP
Sbjct: 241 TQLINEFASCGDSINIVLVYLYGKWGKIEKSEEKFSEIVDKRSAIVWNSMINAYFQNGCP 300
Query: 301 VEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRKGIIASNKM 360
VEALTL+RLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEH GR+GIIASNKM
Sbjct: 301 VEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKM 360
Query: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD
Sbjct: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
Query: 421 IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDA 480
IKPTTGTFIGLLSACSHSGFLEQG QIFIQMATRYSTSPSL+HYACYIDLLARAGCVEDA
Sbjct: 421 IKPTTGTFIGLLSACSHSGFLEQGHQIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDA 480
Query: 481 LEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATD 540
L+VVSTMPFEPNNFVWSSLLRGCLLHSRFELAR+VSKKLVEVDPESSAGYVMQANSFATD
Sbjct: 481 LKVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATD 540
Query: 541 LQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYSTLSELERQM 600
LQWDDVSALRWFMREKGVHKQPGRSWISI+GIVHEFFSATKSHPCVDLLYSTLSELERQM
Sbjct: 541 LQWDDVSALRWFMREKGVHKQPGRSWISINGIVHEFFSATKSHPCVDLLYSTLSELERQM 600
Query: 601 KLAIP 605
KL IP
Sbjct: 601 KLVIP 605
BLAST of Csor.00g000250 vs. NCBI nr
Match:
XP_038888799.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benincasa hispida])
HSP 1 Score: 1054 bits (2726), Expect = 0.0
Identity = 523/608 (86.02%), Postives = 561/608 (92.27%), Query Frame = 0
Query: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
MVNGKSYAMR+ CINP+ INLSDLLQGRI++S LRQIH RVFRLLKHQDNLIATRLIGHY
Sbjct: 19 MVNGKSYAMRALCINPDSINLSDLLQGRISNSHLRQIHARVFRLLKHQDNLIATRLIGHY 78
Query: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
PHSVG+ VFNQL+RPNIFPCNAIIRVLAE N SFLAFSIFKSLK LSLSPNDFTFSFLLK
Sbjct: 79 PHSVGLSVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHLSLSPNDFTFSFLLK 138
Query: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMA 180
AFHRSSH+ NVKQVHTHVLKMGYLGDSFISNALLGVYA+GLKDM SAH +FDEMS RE+A
Sbjct: 139 AFHRSSHALNVKQVHTHVLKMGYLGDSFISNALLGVYARGLKDMASAHKLFDEMSGREIA 198
Query: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
C WT LIAGYA MGLAE ALL FVMMI+EN+QPEDDTMVSVLSACSK IAEIEKWV EL
Sbjct: 199 C-WTSLIAGYAQMGLAENALLHFVMMIEENMQPEDDTMVSVLSACSKFHIAEIEKWVVEL 258
Query: 241 TQLVNEFD---SCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQN 300
QLVN+FD SCCDSINIVL+YLYGKWGKIEKSEEKFNEIVDKRS +VWNSMINAYFQN
Sbjct: 259 RQLVNKFDPKSSCCDSINIVLIYLYGKWGKIEKSEEKFNEIVDKRSVLVWNSMINAYFQN 318
Query: 301 GCPVEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRKGIIAS 360
GCPVE LTL+RLM+EN HCKPNHVTMVTVLSACA IGDLQLG VH+ LEH GR+G+IAS
Sbjct: 319 GCPVETLTLFRLMVENSHCKPNHVTMVTVLSACALIGDLQLGCWVHDFLEHGGRRGVIAS 378
Query: 361 NKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQ 420
NKMLATALIDMYCKSGSLE+AK+VFH+LI KDVISFNAMIMGLAVNGK DEALKLF+QMQ
Sbjct: 379 NKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 438
Query: 421 ESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCV 480
E DI+PTTGTF+ LLSACSHSGFLEQGRQIFI+M TRY P+L+HYACYIDLLARAG
Sbjct: 439 EVDIRPTTGTFVSLLSACSHSGFLEQGRQIFIEMTTRYFILPTLEHYACYIDLLARAGHF 498
Query: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSF 540
EDALEVVSTMPFEPNN VWSSLL GCLLHS+FELA++VSKKLVEVDPE+SAGYVMQANSF
Sbjct: 499 EDALEVVSTMPFEPNNCVWSSLLGGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSF 558
Query: 541 ATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYSTLSELE 600
ATDLQWDDVSALRWFMREKGVHKQPG+SWISIDGIVHEFFSA KSHP VDLLY+TL+ELE
Sbjct: 559 ATDLQWDDVSALRWFMREKGVHKQPGQSWISIDGIVHEFFSAMKSHPSVDLLYNTLNELE 618
Query: 601 RQMKLAIP 605
+QMKL +P
Sbjct: 619 KQMKLVLP 625
BLAST of Csor.00g000250 vs. ExPASy TrEMBL
Match:
A0A6J1GKT0 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454858 PE=4 SV=1)
HSP 1 Score: 1198 bits (3100), Expect = 0.0
Identity = 594/605 (98.18%), Postives = 600/605 (99.17%), Query Frame = 0
Query: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
MVNGKSYAMRSSCIN EFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY
Sbjct: 1 MVNGKSYAMRSSCINLEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
Query: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
P+SVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK
Sbjct: 61 PYSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMA 180
AFHRSSHSPNVKQVHTHV+KMGYLGDSFISNALLGVYA+GLKDMGSAHNMFDEMSEREMA
Sbjct: 121 AFHRSSHSPNVKQVHTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMA 180
Query: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
CCWT LIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL
Sbjct: 181 CCWTSLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
Query: 241 TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP 300
TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP
Sbjct: 241 TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP 300
Query: 301 VEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRKGIIASNKM 360
VEALTL+RLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEH GR+GIIASNKM
Sbjct: 301 VEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKM 360
Query: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD
Sbjct: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
Query: 421 IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDA 480
IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDA
Sbjct: 421 IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDA 480
Query: 481 LEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATD 540
LEVVSTMPFEPNNFVWSSLLRGCLLHSRFELAR+VSKKLVEVDPESSAGYVMQANSFATD
Sbjct: 481 LEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATD 540
Query: 541 LQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYSTLSELERQM 600
LQWDDVSALRWFMREKGVHKQPGRSWISIDG VHEFFSATKSHPCVDLLYSTLSELERQM
Sbjct: 541 LQWDDVSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHPCVDLLYSTLSELERQM 600
Query: 601 KLAIP 605
KL IP
Sbjct: 601 KLVIP 605
BLAST of Csor.00g000250 vs. ExPASy TrEMBL
Match:
A0A6J1I671 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111471066 PE=4 SV=1)
HSP 1 Score: 1177 bits (3045), Expect = 0.0
Identity = 584/605 (96.53%), Postives = 595/605 (98.35%), Query Frame = 0
Query: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY
Sbjct: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
Query: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK
Sbjct: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMA 180
AFHRSSHSPNVKQVHT V+KMGYLGDSFISNALLGVYA+GL+DM SAHNMFDEMSEREMA
Sbjct: 121 AFHRSSHSPNVKQVHTQVMKMGYLGDSFISNALLGVYARGLQDMCSAHNMFDEMSEREMA 180
Query: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
CCWT LIAGYAHMGL EKALLLFVMMIKENIQP DDTMVSVLSACSKLQIAEIEKWVAEL
Sbjct: 181 CCWTSLIAGYAHMGLVEKALLLFVMMIKENIQPVDDTMVSVLSACSKLQIAEIEKWVAEL 240
Query: 241 TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP 300
TQL+NEF SC DSINIVLVYLYGKWGKIEKSEEKF+EIVDKRSAIVWNSMINAYFQNGCP
Sbjct: 241 TQLINEFASCGDSINIVLVYLYGKWGKIEKSEEKFSEIVDKRSAIVWNSMINAYFQNGCP 300
Query: 301 VEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRKGIIASNKM 360
VEALTL+RLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEH GR+GIIASNKM
Sbjct: 301 VEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKM 360
Query: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD
Sbjct: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
Query: 421 IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDA 480
IKPTTGTFIGLLSACSHSGFLEQG QIFIQMATRYSTSPSL+HYACYIDLLARAGCVEDA
Sbjct: 421 IKPTTGTFIGLLSACSHSGFLEQGHQIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDA 480
Query: 481 LEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATD 540
L+VVSTMPFEPNNFVWSSLLRGCLLHSRFELAR+VSKKLVEVDPESSAGYVMQANSFATD
Sbjct: 481 LKVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATD 540
Query: 541 LQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYSTLSELERQM 600
LQWDDVSALRWFMREKGVHKQPGRSWISI+GIVHEFFSATKSHPCVDLLYSTLSELERQM
Sbjct: 541 LQWDDVSALRWFMREKGVHKQPGRSWISINGIVHEFFSATKSHPCVDLLYSTLSELERQM 600
Query: 601 KLAIP 605
KL IP
Sbjct: 601 KLVIP 605
BLAST of Csor.00g000250 vs. ExPASy TrEMBL
Match:
A0A5D3C6A4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001060 PE=4 SV=1)
HSP 1 Score: 1052 bits (2721), Expect = 0.0
Identity = 518/608 (85.20%), Postives = 560/608 (92.11%), Query Frame = 0
Query: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
M+N KSYAMR +NPEFINLSDLLQGRIN+S LRQIH RVFRLLKHQDNLIATRLIGHY
Sbjct: 28 MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 87
Query: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
PHSVG+RVFNQL+RPNIFPCNAIIRVLAE N SFLA SIFKSLK LSLSPNDFTFSFLLK
Sbjct: 88 PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 147
Query: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMA 180
AFHRS ++ +VKQVHTHVLKMGY GDSFISNALLGVYA+GLKDM SAH +FDEMS+REMA
Sbjct: 148 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 207
Query: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
CCWT LIAGYA MGLAEKA+L+FV MIKEN+QPEDDTMVSVLSACSK QIAEIEKWV L
Sbjct: 208 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 267
Query: 241 TQLVNEFDS---CCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQN 300
+LVN+FDS CCDSINIVL+YLYGKWG +EKSEEKFNEI+DK+S +VWNSMINAYFQN
Sbjct: 268 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 327
Query: 301 GCPVEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRKGIIAS 360
G PVEALTL+RLM+ENPHCKPNHVTMVTV+SACAQIGDLQLG VHE L+ SGRKGIIAS
Sbjct: 328 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 387
Query: 361 NKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQ 420
NKMLATALIDMYCK GSLE+AK+VFH+LI KDVISFNAMIMGLAVNGK DEALKLF+QMQ
Sbjct: 388 NKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 447
Query: 421 ESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCV 480
E DI+P+TGTFIGLLSACSHSGFLEQG QIFI+M T+Y SPSL+HYACYIDLLARAG
Sbjct: 448 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 507
Query: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSF 540
EDALEVVSTMPFEPNNFVWSSLLRGCLLHS FELA++VSKKLVEVDPE+SAGYVMQANSF
Sbjct: 508 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 567
Query: 541 ATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYSTLSELE 600
A+D QWDDVSALRWFMREKGVHKQPG+SWISIDG VHEFFSATKSHP VDLLYSTL+EL+
Sbjct: 568 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 627
Query: 601 RQMKLAIP 605
+Q KL IP
Sbjct: 628 KQTKLVIP 635
BLAST of Csor.00g000250 vs. ExPASy TrEMBL
Match:
A0A1S3BZG8 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495291 PE=4 SV=1)
HSP 1 Score: 1052 bits (2721), Expect = 0.0
Identity = 518/608 (85.20%), Postives = 560/608 (92.11%), Query Frame = 0
Query: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
M+N KSYAMR +NPEFINLSDLLQGRIN+S LRQIH RVFRLLKHQDNLIATRLIGHY
Sbjct: 1 MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 60
Query: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
PHSVG+RVFNQL+RPNIFPCNAIIRVLAE N SFLA SIFKSLK LSLSPNDFTFSFLLK
Sbjct: 61 PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMA 180
AFHRS ++ +VKQVHTHVLKMGY GDSFISNALLGVYA+GLKDM SAH +FDEMS+REMA
Sbjct: 121 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 180
Query: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
CCWT LIAGYA MGLAEKA+L+FV MIKEN+QPEDDTMVSVLSACSK QIAEIEKWV L
Sbjct: 181 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 240
Query: 241 TQLVNEFDS---CCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQN 300
+LVN+FDS CCDSINIVL+YLYGKWG +EKSEEKFNEI+DK+S +VWNSMINAYFQN
Sbjct: 241 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 300
Query: 301 GCPVEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRKGIIAS 360
G PVEALTL+RLM+ENPHCKPNHVTMVTV+SACAQIGDLQLG VHE L+ SGRKGIIAS
Sbjct: 301 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 360
Query: 361 NKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQ 420
NKMLATALIDMYCK GSLE+AK+VFH+LI KDVISFNAMIMGLAVNGK DEALKLF+QMQ
Sbjct: 361 NKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 420
Query: 421 ESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCV 480
E DI+P+TGTFIGLLSACSHSGFLEQG QIFI+M T+Y SPSL+HYACYIDLLARAG
Sbjct: 421 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 480
Query: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSF 540
EDALEVVSTMPFEPNNFVWSSLLRGCLLHS FELA++VSKKLVEVDPE+SAGYVMQANSF
Sbjct: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 540
Query: 541 ATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYSTLSELE 600
A+D QWDDVSALRWFMREKGVHKQPG+SWISIDG VHEFFSATKSHP VDLLYSTL+EL+
Sbjct: 541 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 600
Query: 601 RQMKLAIP 605
+Q KL IP
Sbjct: 601 KQTKLVIP 608
BLAST of Csor.00g000250 vs. ExPASy TrEMBL
Match:
A0A5A7SP64 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G001050 PE=4 SV=1)
HSP 1 Score: 1051 bits (2718), Expect = 0.0
Identity = 517/608 (85.03%), Postives = 560/608 (92.11%), Query Frame = 0
Query: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
M+N KSYAMR +NPEFINLSDLLQGRIN+S LRQIH RVFRLLKHQDNLIATRLIGHY
Sbjct: 28 MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 87
Query: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
PHSVG+RVFNQL+RPNIFPCNAIIRVLAE N SFLA SIFKSLK LSLSPNDFTFSFLLK
Sbjct: 88 PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 147
Query: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMA 180
AFHRS ++ +VKQVHTHVLKMGY GDSFISNALLGVYA+GLKDM SAH +FDEMS+REMA
Sbjct: 148 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 207
Query: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
CCWT LIAGYA MGLAEKA+L+FV MIKEN+QPEDDTMVSVLSACSK QIAEIEKWV L
Sbjct: 208 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 267
Query: 241 TQLVNEFDS---CCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQN 300
+LVN+FDS CCDSINIVL+YLYGKWG +EKSEEKFNEI+DK+S +VWNSMINAYFQN
Sbjct: 268 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 327
Query: 301 GCPVEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRKGIIAS 360
G PVEALTL+RLM+ENPHCKPNHVTMVTV+SACAQIGDLQLG VHE L+ SGRKGIIAS
Sbjct: 328 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 387
Query: 361 NKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQ 420
NKMLATALID+YCK GSLE+AK+VFH+LI KDVISFNAMIMGLAVNGK DEALKLF+QMQ
Sbjct: 388 NKMLATALIDLYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 447
Query: 421 ESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCV 480
E DI+P+TGTFIGLLSACSHSGFLEQG QIFI+M T+Y SPSL+HYACYIDLLARAG
Sbjct: 448 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 507
Query: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSF 540
EDALEVVSTMPFEPNNFVWSSLLRGCLLHS FELA++VSKKLVEVDPE+SAGYVMQANSF
Sbjct: 508 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 567
Query: 541 ATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYSTLSELE 600
A+D QWDDVSALRWFMREKGVHKQPG+SWISIDG VHEFFSATKSHP VDLLYSTL+EL+
Sbjct: 568 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 627
Query: 601 RQMKLAIP 605
+Q KL IP
Sbjct: 628 KQTKLVIP 635
BLAST of Csor.00g000250 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 357.1 bits (915), Expect = 2.9e-98
Identity = 209/605 (34.55%), Postives = 333/605 (55.04%), Query Frame = 0
Query: 34 LRQIHGRVFRLLKHQDNLIATRLIGH---YPHSVG----IRVFNQLLRPNIFPCNAIIRV 93
LR IH ++ ++ H N ++LI PH G I VF + PN+ N + R
Sbjct: 49 LRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG 108
Query: 94 LAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVLKMGYLGD 153
A S+ A ++ + L L PN +TF F+LK+ +S +Q+H HVLK+G D
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168
Query: 154 SFISNALLGVYAKGLKDMGSAHNMFDEMSEREM--------------------------- 213
++ +L+ +Y + + + AH +FD+ R++
Sbjct: 169 LYVHTSLISMYVQNGR-LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 228
Query: 214 ---ACCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEK- 273
W +I+GYA G ++AL LF M+K N++P++ TMV+V+SAC++ E+ +
Sbjct: 229 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 288
Query: 274 ---WVAELTQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMIN 333
W+ + + F S +N L+ LY K G++E + F E + + I WN++I
Sbjct: 289 VHLWIDD-----HGFGSNLKIVN-ALIDLYSKCGELETACGLF-ERLPYKDVISWNTLIG 348
Query: 334 AYFQNGCPVEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRK 393
Y EAL L++ ML + PN VTM+++L ACA +G + +GR +H ++ K
Sbjct: 349 GYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYID-KRLK 408
Query: 394 GIIASNKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKL 453
G+ ++ L T+LIDMY K G +E A QVF+ ++ K + S+NAMI G A++G+AD + L
Sbjct: 409 GVTNASS-LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 468
Query: 454 FSQMQESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLA 513
FS+M++ I+P TF+GLLSACSHSG L+ GR IF M Y +P L+HY C IDLL
Sbjct: 469 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 528
Query: 514 RAGCVEDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVM 573
+G ++A E+++ M EP+ +W SLL+ C +H EL ++ L++++PE+ YV+
Sbjct: 529 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 588
Query: 574 QANSFATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYST 598
+N +A+ +W++V+ R + +KG+ K PG S I ID +VHEF K HP +Y
Sbjct: 589 LSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM 642
BLAST of Csor.00g000250 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 337.8 bits (865), Expect = 1.8e-92
Identity = 202/621 (32.53%), Postives = 333/621 (53.62%), Query Frame = 0
Query: 24 LLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPHS------VGIRVFNQLLRPNI 83
L++ ++ +L+Q HG + R D A++L S +VF+++ +PN
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 84 FPCNAIIRVLAESNCSFLAFSIFKSLKRLSLS---PNDFTFSFLLKAFHRSSHSPNVKQV 143
F N +IR A L SI+ L +S S PN +TF FL+KA S + +
Sbjct: 96 FAWNTLIRAYASGPDPVL--SIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 155
Query: 144 HTHVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMACCWTPLIAGYAHMG 203
H +K D F++N+L+ Y D+ SA +F + E+++ W +I G+ G
Sbjct: 156 HGMAVKSAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEKDVV-SWNSMINGFVQKG 215
Query: 204 LAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFDSCCDSI 263
+KAL LF M E+++ TMV VLSAC+K++ E + Q+ + + ++
Sbjct: 216 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR------QVCSYIEENRVNV 275
Query: 264 NIVL----VYLYGKWGKIEKSEEKFNEIVDK----------------------------- 323
N+ L + +Y K G IE ++ F+ + +K
Sbjct: 276 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 335
Query: 324 -RSAIVWNSMINAYFQNGCPVEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGR 383
+ + WN++I+AY QNG P EAL ++ + + K N +T+V+ LSACAQ+G L+LGR
Sbjct: 336 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 395
Query: 384 RVHEALEHSGRKGIIASNKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGL 443
+H ++ G I N + +ALI MY K G LEK+++VF+ + +DV ++AMI GL
Sbjct: 396 WIHSYIKKHG----IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGL 455
Query: 444 AVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPS 503
A++G +EA+ +F +MQE+++KP TF + ACSH+G +++ +F QM + Y P
Sbjct: 456 AMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPE 515
Query: 504 LDHYACYIDLLARAGCVEDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLV 563
HYAC +D+L R+G +E A++ + MP P+ VW +LL C +H+ LA +L+
Sbjct: 516 EKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLL 575
Query: 564 EVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSAT 602
E++P + +V+ +N +A +W++VS LR MR G+ K+PG S I IDG++HEF S
Sbjct: 576 ELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGD 635
BLAST of Csor.00g000250 vs. TAIR 10
Match:
AT3G08820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 335.5 bits (859), Expect = 8.9e-92
Identity = 191/579 (32.99%), Postives = 310/579 (53.54%), Query Frame = 0
Query: 32 SRLRQIHGRVFRLLKHQD----NLIATRLIGHYPHSVGIRVFNQLLRPNIFPCNAIIRVL 91
+ L+QIH + H D NL+ R + +F+ PNIF N++I
Sbjct: 27 NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86
Query: 92 AESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVLKMGYLGDS 151
++ +F S+++ L + FTF +LKA R+S +H+ V+K G+ D
Sbjct: 87 VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146
Query: 152 FISNALLGVYAKGLKDMGSAHNMFDEMSEREMACCWTPLIAGYAHMGLAEKALLLFVMMI 211
+LL +Y+ G + AH +FDE+ +R + WT L +GY G +A+ LF M+
Sbjct: 147 AAMTSLLSIYS-GSGRLNDAHKLFDEIPDRSVV-TWTALFSGYTTSGRHREAIDLFKKMV 206
Query: 212 KENIQPEDDTMVSVLSACSKLQIAEIEKWVA----ELTQLVNEFDSCCDSINIVLVYLYG 271
+ ++P+ +V VLSAC + + +W+ E+ N F + LV LY
Sbjct: 207 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF------VRTTLVNLYA 266
Query: 272 KWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALTLYRLMLENPHCKPNHVTM 331
K GK+EK+ F+ +V+K + W++MI Y N P E + L+ ML+ + KP+ ++
Sbjct: 267 KCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQE-NLKPDQFSI 326
Query: 332 VTVLSACAQIGDLQLGRRVHEALEHSGRKGIIASNKMLATALIDMYCKSGSLEKAKQVFH 391
V LS+CA +G L LG ++ + +N +A ALIDMY K G++ + +VF
Sbjct: 327 VGFLSSCASLGALDLGEWGISLID----RHEFLTNLFMANALIDMYAKCGAMARGFEVFK 386
Query: 392 ELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFLEQ 451
E+ KD++ NA I GLA NG + +F Q ++ I P TF+GLL C H+G ++
Sbjct: 387 EMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQD 446
Query: 452 GRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNFVWSSLLRGC 511
G + F ++ Y+ +++HY C +DL RAG ++DA ++ MP PN VW +LL GC
Sbjct: 447 GLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 506
Query: 512 LLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKGVHKQPG 571
L +LA V K+L+ ++P ++ YV +N ++ +WD+ + +R M +KG+ K PG
Sbjct: 507 RLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPG 566
Query: 572 RSWISIDGIVHEFFSATKSHPCVDLLYSTLSELERQMKL 603
SWI ++G VHEF + KSHP D +Y+ L +L +M+L
Sbjct: 567 YSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
BLAST of Csor.00g000250 vs. TAIR 10
Match:
AT3G12770.1 (mitochondrial editing factor 22 )
HSP 1 Score: 334.3 bits (856), Expect = 2.0e-91
Identity = 196/587 (33.39%), Postives = 333/587 (56.73%), Query Frame = 0
Query: 22 SDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPHSVG-----IRVFNQLLRPN 81
+ L+ + ++L+QIH R+ L + T+LI H S G +VF+ L RP
Sbjct: 25 ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI-HASSSFGDITFARQVFDDLPRPQ 84
Query: 82 IFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHT 141
IFP NAIIR + +N A ++ +++ +SP+ FTF LLKA SH + VH
Sbjct: 85 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 144
Query: 142 HVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMA-CCWTPLIAGYAHMGL 201
V ++G+ D F+ N L+ +YAK + +GSA +F+ + E WT +++ YA G
Sbjct: 145 QVFRLGFDADVFVQNGLIALYAK-CRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 204
Query: 202 AEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWV-AELTQLVNEFDSCCDSI 261
+AL +F M K +++P+ +VSVL+A + LQ + + + A + ++ E + +
Sbjct: 205 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE---PDL 264
Query: 262 NIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALTLYRLMLENP 321
I L +Y K G++ ++ F++ + + I+WN+MI+ Y +NG EA+ ++ M+ N
Sbjct: 265 LISLNTMYAKCGQVATAKILFDK-MKSPNLILWNAMISGYAKNGYAREAIDMFHEMI-NK 324
Query: 322 HCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRKGIIASNKMLATALIDMYCKSGS 381
+P+ +++ + +SACAQ+G L+ R ++E + S + + +++ALIDM+ K GS
Sbjct: 325 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR----DDVFISSALIDMFAKCGS 384
Query: 382 LEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSA 441
+E A+ VF + +DV+ ++AMI+G ++G+A EA+ L+ M+ + P TF+GLL A
Sbjct: 385 VEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 444
Query: 442 CSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNF 501
C+HSG + +G F +MA + +P HYAC IDLL RAG ++ A EV+ MP +P
Sbjct: 445 CNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVT 504
Query: 502 VWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMR 561
VW +LL C H EL + +++L +DP ++ YV +N +A WD V+ +R M+
Sbjct: 505 VWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMK 564
Query: 562 EKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYSTLSELERQMK 602
EKG++K G SW+ + G + F KSHP + + + +E ++K
Sbjct: 565 EKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLK 599
BLAST of Csor.00g000250 vs. TAIR 10
Match:
AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 332.4 bits (851), Expect = 7.5e-91
Identity = 189/573 (32.98%), Postives = 319/573 (55.67%), Query Frame = 0
Query: 30 NSSRLRQIHGRVFRLLKHQDNLIATRLIGHY----PHSVGIRVFNQLLRPNIFPCNAIIR 89
N ++++Q+H ++ R H+D IA +LI ++ +RVFNQ+ PN+ CN++IR
Sbjct: 31 NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90
Query: 90 VLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVLKMGYLG 149
A+++ + AF +F ++R L ++FT+ FLLKA S P VK +H H+ K+G
Sbjct: 91 AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150
Query: 150 DSFISNALLGVYAK-GLKDMGSAHNMFDEMSEREMACCWTPLIAGYAHMGLAEKALLLFV 209
D ++ NAL+ Y++ G + A +F++MSER+ W ++ G G A LF
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD-TVSWNSMLGGLVKAGELRDARRLFD 210
Query: 210 MMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFDSCCDSINIVLVYLYGK 269
M + ++ +TM+ + C ++ A EL + + E ++ S +V Y K
Sbjct: 211 EMPQRDL-ISWNTMLDGYARCREMSKA------FELFEKMPERNTVSWS---TMVMGYSK 270
Query: 270 WGKIEKSEEKFNEI-VDKRSAIVWNSMINAYFQNGCPVEALTLYRLMLENPHCKPNHVTM 329
G +E + F+++ + ++ + W +I Y + G EA L M+ + K + +
Sbjct: 271 AGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS-GLKFDAAAV 330
Query: 330 VTVLSACAQIGDLQLGRRVHEALEHSGRKGIIASNKMLATALIDMYCKSGSLEKAKQVFH 389
+++L+AC + G L LG R+H L+ S + SN + AL+DMY K G+L+KA VF+
Sbjct: 331 ISILAACTESGLLSLGMRIHSILKRSN----LGSNAYVLNALLDMYAKCGNLKKAFDVFN 390
Query: 390 ELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFLEQ 449
++ KD++S+N M+ GL V+G EA++LFS+M+ I+P TFI +L +C+H+G +++
Sbjct: 391 DIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDE 450
Query: 450 GRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNFVWSSLLRGC 509
G F M Y P ++HY C +DLL R G +++A++VV TMP EPN +W +LL C
Sbjct: 451 GIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGAC 510
Query: 510 LLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKGVHKQPG 569
+H+ ++A+ V LV++DP Y + +N +A W+ V+ +R M+ GV K G
Sbjct: 511 RMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSG 570
Query: 570 RSWISIDGIVHEFFSATKSHPCVDLLYSTLSEL 597
S + ++ +HEF KSHP D +Y L L
Sbjct: 571 ASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LN01 | 4.0e-97 | 34.55 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
O82380 | 2.5e-91 | 32.53 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9SR82 | 1.3e-90 | 32.99 | Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis th... | [more] |
Q9LTV8 | 2.8e-90 | 33.39 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... | [more] |
Q9LS72 | 1.1e-89 | 32.98 | Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
KAG6571934.1 | 0.0 | 100.00 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
KAG7011622.1 | 0.0 | 98.68 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022952095.1 | 0.0 | 98.18 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor... | [more] |
XP_022972521.1 | 0.0 | 96.53 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... | [more] |
XP_038888799.1 | 0.0 | 86.02 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benin... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GKT0 | 0.0 | 98.18 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor... | [more] |
A0A6J1I671 | 0.0 | 96.53 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cuc... | [more] |
A0A5D3C6A4 | 0.0 | 85.20 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BZG8 | 0.0 | 85.20 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor... | [more] |
A0A5A7SP64 | 0.0 | 85.03 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT1G08070.1 | 2.9e-98 | 34.55 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G29760.1 | 1.8e-92 | 32.53 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G08820.1 | 8.9e-92 | 32.99 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G12770.1 | 2.0e-91 | 33.39 | mitochondrial editing factor 22 | [more] |
AT3G29230.1 | 7.5e-91 | 32.98 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |