CsaV3_UNG146140 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_UNG146140
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein UPSTREAM OF FLC
Location	scaffold66: 267841 .. 269267 (-)
RNA-Seq Expression	CsaV3_UNG146140
Synteny	CsaV3_UNG146140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGAAAGACAGAGACCACCACCACCGTCACCACCGTCGCCGCGACTCTCCCACTCCGATGAAAAAAGCCCAAGTTTTTTACTATATCTCCAGAAACGGCCGTCTGGAACAACCCCATTTTCTCGAAATCCCTCTCTTCCCCAACCACCCTCTTCGTCTCAAAGGTACGCTTCTTCTACTATTTCGAACGACACGTCGTTTTGGGTCTCATCGTATTCAATGTGACGACAGATGTTTTGGATCGGCTCGCTGTTCTCAGGGGCAACGCCATGCCTTTCCTCTATTCTTGGTCCTGTAAAAGGTATAAAAATGAAAAAGAGAAAGGAGGAAAAATAAAAACAGGGGGTTCTCTGTTCTGTAAGACGACATGTCGTTTAGCGAGTCTCAGGGTTCTTTTTATTTTTATTGTTTGGTTTATTTTAGGAACTATAAAAGTGGATATGTGTGGAACGACTTGTCGGAAAATGACGTGGTTTATCCCGCTGAAGGTTATGAATACGTTCTCAAGGCATCTCAACTTGTTGATCTTCATGCCTCCTGTGGTGATTTTTTGTCTTTATATCTATCTATAATTTTCTTCATAAATGATTTTGCAGTTTAAATTTAATATTCAAACTTTACATATATTTAAAAATTAATTGCGAAGAGATTACTATTTATTATTATTATTATTGGGAGAAATCACCATTTTAATTTGTTATAATTTAAATTCAACTTGCTTTTAGTATGATCATGGGTGTACGAATGGTGTACATTTGATCGGTGAAATATGATGGGCAAAATGAAATTACATGCTCATCATCATAGAGAGATTTTGCAGATTCATAATTATTCTTGAATTAATGAGTTCATGATTCTTGAATTCTCATTAATGAGCTTCTTTTCTTTTGGTTAAGTGTTTTAAAAGTAACTGAAATTTGAATGATGTGTCAAGCTTTTAAATAATGTTTAATAGGTCTTTCAATTTTTAACTCATGATTGTACTATAATAATATTATATTTGAACAGTTTTATTTGCTATAAAAATTAAATTCAAATTTATAAAGTTATTAAAAAAATTTAAAAAATATGAAATTTTGGGCTACCAATTATAAAACAATTTGTGATGTCACGGAAATACTGTATCATAATTCATTTCAAAATAGTTTATATTATATTTATTTCTCAGAAAAATTGCAGCAAGTACACATACCCAACAACAACCCAAGGCAACCGGTTCAAGAACCCAACCTCCCAACTAAAACTCGGAAACAGCAACTCGCACCCACTCCACTCCCCCACCACCCACATTCCGATTTAGAATACGACGAAGACGAAGATTACGAATACGACGATGGCGATAAGAACGCTGGGGAACCCCCGGGACAACTCAGACTCCGACCGAGTCGGCTCGATGTTCCACTTCGAAACGGTTTGCCTTGA

mRNA sequence

ATGGAGGAGAAAGACAGAGACCACCACCACCGTCACCACCGTCGCCGCGACTCTCCCACTCCGATGAAAAAAGCCCAAGTTTTTTACTATATCTCCAGAAACGGCCGTCTGGAACAACCCCATTTTCTCGAAATCCCTCTCTTCCCCAACCACCCTCTTCGTCTCAAAGATGTTTTGGATCGGCTCGCTGTTCTCAGGGGCAACGCCATGCCTTTCCTCTATTCTTGGTCCTGTAAAAGTGGATATGTGTGGAACGACTTGTCGGAAAATGACGTGGTTTATCCCGCTGAAGGTTATGAATACGTTCTCAAGGCATCTCAACTTGTTGATCTTCATGCCTCCTGTGAAAAATTGCAGCAAGTACACATACCCAACAACAACCCAAGGCAACCGGTTCAAGAACCCAACCTCCCAACTAAAACTCGGAAACAGCAACTCGCACCCACTCCACTCCCCCACCACCCACATTCCGATTTAGAATACGACGAAGACGAAGATTACGAATACGACGATGGCGATAAGAACGCTGGGGAACCCCCGGGACAACTCAGACTCCGACCGAGTCGGCTCGATGTTCCACTTCGAAACGGTTTGCCTTGA

Coding sequence (CDS)

ATGGAGGAGAAAGACAGAGACCACCACCACCGTCACCACCGTCGCCGCGACTCTCCCACTCCGATGAAAAAAGCCCAAGTTTTTTACTATATCTCCAGAAACGGCCGTCTGGAACAACCCCATTTTCTCGAAATCCCTCTCTTCCCCAACCACCCTCTTCGTCTCAAAGATGTTTTGGATCGGCTCGCTGTTCTCAGGGGCAACGCCATGCCTTTCCTCTATTCTTGGTCCTGTAAAAGTGGATATGTGTGGAACGACTTGTCGGAAAATGACGTGGTTTATCCCGCTGAAGGTTATGAATACGTTCTCAAGGCATCTCAACTTGTTGATCTTCATGCCTCCTGTGAAAAATTGCAGCAAGTACACATACCCAACAACAACCCAAGGCAACCGGTTCAAGAACCCAACCTCCCAACTAAAACTCGGAAACAGCAACTCGCACCCACTCCACTCCCCCACCACCCACATTCCGATTTAGAATACGACGAAGACGAAGATTACGAATACGACGATGGCGATAAGAACGCTGGGGAACCCCCGGGACAACTCAGACTCCGACCGAGTCGGCTCGATGTTCCACTTCGAAACGGTTTGCCTTGA

Protein sequence

MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLDRLAVLRGNAMPFLYSWSCKSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCEKLQQVHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNAGEPPGQLRLRPSRLDVPLRNGLP*

Homology

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BLAST of CsaV3_UNG146140 vs. NCBI nr
Match: KAE8637152.1 (hypothetical protein CSA_004634 [Cucumis sativus] >KAE8637178.1 hypothetical protein CSA_018809 [Cucumis sativus])

HSP 1 Score: 416.8 bits (1070), Expect = 1.1e-112
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD 60
           MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD
Sbjct: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD 60

Query: 61  RLAVLRGNAMPFLYSWSCKSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCEKLQQ 120
           RLAVLRGNAMPFLYSWSCKSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCEKLQQ
Sbjct: 61  RLAVLRGNAMPFLYSWSCKSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCEKLQQ 120

Query: 121 VHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNAGEPP 180
           VHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNAGEPP
Sbjct: 121 VHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNAGEPP 180

Query: 181 GQLRLRPSRLDVPLRNGLP 200
           GQLRLRPSRLDVPLRNGLP
Sbjct: 181 GQLRLRPSRLDVPLRNGLP 199

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BLAST of CsaV3_UNG146140 vs. NCBI nr
Match: KAE8637221.1 (hypothetical protein CSA_021616 [Cucumis sativus])

HSP 1 Score: 412.5 bits (1059), Expect = 2.0e-111
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD 60
           MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD
Sbjct: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD 60

Query: 61  RLAVLRGNAMPFLYSWSCKSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCEKLQQ 120
           RLAVLRGNAMPFLYSWSCKSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCEKLQQ
Sbjct: 61  RLAVLRGNAMPFLYSWSCKSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCEKLQQ 120

Query: 121 VHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNAGEPP 180
           VHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNAGEPP
Sbjct: 121 VHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNAGEPP 180

Query: 181 GQLRLRPSRLDVPLRNG 198
           GQLRLRPSRLDVPLRNG
Sbjct: 181 GQLRLRPSRLDVPLRNG 197

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BLAST of CsaV3_UNG146140 vs. NCBI nr
Match: XP_031745651.1 (protein UPSTREAM OF FLC-like isoform X2 [Cucumis sativus] >XP_031745655.1 protein UPSTREAM OF FLC-like isoform X2 [Cucumis sativus] >XP_031745703.1 protein UPSTREAM OF FLC-like isoform X2 [Cucumis sativus])

HSP 1 Score: 411.0 bits (1055), Expect = 5.9e-111
Identity = 199/203 (98.03%), Postives = 199/203 (98.03%), Query Frame = 0


Query: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD 60
           MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD
Sbjct: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD 60

Query: 61  RLAVLRGNAMPFLYSWSC----KSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCE 120
           RLAVLRGNAMPFLYSWSC    KSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCE
Sbjct: 61  RLAVLRGNAMPFLYSWSCKRNYKSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCE 120

Query: 121 KLQQVHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNA 180
           KLQQVHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNA
Sbjct: 121 KLQQVHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNA 180

Query: 181 GEPPGQLRLRPSRLDVPLRNGLP 200
           GEPPGQLRLRPSRLDVPLRNGLP
Sbjct: 181 GEPPGQLRLRPSRLDVPLRNGLP 203

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BLAST of CsaV3_UNG146140 vs. NCBI nr
Match: XP_011653119.2 (protein UPSTREAM OF FLC isoform X2 [Cucumis sativus])

HSP 1 Score: 374.4 bits (960), Expect = 6.1e-100
Identity = 181/185 (97.84%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD 60
           MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD
Sbjct: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD 60

Query: 61  RLAVLRGNAMPFLYSWSC----KSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCE 120
           RLAVLRGNAMPFLYSWSC    KSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCE
Sbjct: 61  RLAVLRGNAMPFLYSWSCKRNYKSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCE 120

Query: 121 KLQQVHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNA 180
           KLQQVHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNA
Sbjct: 121 KLQQVHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNA 180

Query: 181 GEPPG 182
           GEPPG
Sbjct: 181 GEPPG 185

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BLAST of CsaV3_UNG146140 vs. NCBI nr
Match: XP_031745649.1 (uncharacterized protein LOC116406091 isoform X1 [Cucumis sativus] >XP_031745650.1 uncharacterized protein LOC116406091 isoform X1 [Cucumis sativus] >XP_031745653.1 uncharacterized protein LOC116406092 isoform X1 [Cucumis sativus] >XP_031745654.1 uncharacterized protein LOC116406092 isoform X1 [Cucumis sativus] >XP_031745701.1 uncharacterized protein LOC116406148 isoform X1 [Cucumis sativus] >XP_031745702.1 uncharacterized protein LOC116406148 isoform X1 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 8.3e-81
Identity = 165/243 (67.90%), Postives = 171/243 (70.37%), Query Frame = 0


Query: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD 60
           MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD
Sbjct: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD 60

Query: 61  RLAVLRGNAMPFLYSWSCKSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLH-------- 120
           RLAVLRGNAMPFLYSWSCK    + +  E        G  +     +L  L         
Sbjct: 61  RLAVLRGNAMPFLYSWSCKR---YKNEKEKGGKIKTGGSLFCKTTCRLASLRVLFIFIVW 120

Query: 121 ------------ASCEKLQ------------------------QVHIPNNNPRQPVQEPN 180
                        +C K+                         QVHIPNNNPRQPVQEPN
Sbjct: 121 FILGTIKVDMCGTTCRKMTWFIPLKVMNTFSRHLNLLIFMPPVQVHIPNNNPRQPVQEPN 180

Query: 181 LPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNAGEPPGQLRLRPSRLDVPLRN 200
           LPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNAGEPPGQLRLRPSRLDVPLRN
Sbjct: 181 LPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNAGEPPGQLRLRPSRLDVPLRN 240

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BLAST of CsaV3_UNG146140 vs. ExPASy Swiss-Prot
Match: Q9LX14 (Protein SOSEKI 2 OS=Arabidopsis thaliana OX=3702 GN=SOK2 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.8e-25
Identity = 70/174 (40.23%), Postives = 97/174 (55.75%), Query Frame = 0


Query: 8   HHHRHHRRRDSPTPMKK-----AQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLDRL 67
           +HH+H    +     KK      QV YY++RNG LE PHF+E+    N PLRL+DV++RL
Sbjct: 24  NHHQHDEELEEEVKTKKPIFRRVQVVYYLTRNGHLEHPHFIEVISPVNQPLRLRDVMNRL 83

Query: 68  AVLRGNAMPFLYSWSCK----SGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCEKL 127
            +LRG  M   Y+WSCK    +G+VWNDL+ENDV+YP++  EYVLK S++ D      K 
Sbjct: 84  TILRGKCMTSQYAWSCKRSYRNGFVWNDLAENDVIYPSDCAEYVLKGSEITD------KF 143

Query: 128 QQVHI--PNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYD 171
           Q+VH+  P +   Q   +  L     K Q              E +E+ED EY+
Sbjct: 144 QEVHVNRPLSGSIQEAPKSRLLRSKLKPQNRTASFDDAELYVGEEEEEEDGEYE 191

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BLAST of CsaV3_UNG146140 vs. ExPASy Swiss-Prot
Match: Q8GY65 (Protein SOSEKI 4 OS=Arabidopsis thaliana OX=3702 GN=SOK4 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.7e-24
Identity = 52/97 (53.61%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 19  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLDRLAVLRGNAMPFLYSWSC 78
           P+  +   V YY+SRNGRL+ PHF+E+PL  ++ L LKDV++RL  LRGN M  LYSWS 
Sbjct: 14  PSRERIVPVVYYLSRNGRLDHPHFIEVPLSSHNGLYLKDVINRLNDLRGNGMACLYSWSS 73

Query: 79  ----KSGYVWNDLSENDVVYPAEGYEYVLKASQLVDL 112
               K+G+VW DLS+ D ++P  G EYVLK SQ++DL
Sbjct: 74  KRTYKNGFVWYDLSDEDFIFPVHGQEYVLKGSQILDL 110

[Close]

BLAST of CsaV3_UNG146140 vs. ExPASy Swiss-Prot
Match: Q8GYT8 (Protein SOSEKI 3 OS=Arabidopsis thaliana OX=3702 GN=SOK3 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 55/118 (46.61%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 22  MKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLDRLAVLRGNAMPFLYSWSCK-- 81
           +KK Q+ YY+S+N +LE PHF+E+ +   + L L+DV++RL VLRG  M  +YSWS K  
Sbjct: 31  IKKVQIVYYLSKNRQLEHPHFMEVLISSPNGLYLRDVIERLNVLRGRGMASMYSWSSKRS 90

Query: 82  --SGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCEKLQQVHIPNNNPRQPVQEP 136
             +G+VW+DLSE+D++ PA G EYVLK S+L D   S      V++   N +Q V EP
Sbjct: 91  YRNGFVWHDLSEDDLILPANGNEYVLKGSELFDESNSDHFSPIVNLATQNMKQIVVEP 148

[Close]

BLAST of CsaV3_UNG146140 vs. ExPASy Swiss-Prot
Match: Q9FJF5 (Protein SOSEKI 5 OS=Arabidopsis thaliana OX=3702 GN=SOK5 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-21
Identity = 49/99 (49.49%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 16  RDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLDRLAVLRGNAMPFLYS 75
           R  P   +K  V YY+ RNG+L+ PHF+E+ L  +  L LKDV++RL  LRG  M  LYS
Sbjct: 38  RLKPVVNRKVPVVYYLCRNGQLDHPHFIEVTLSSHDGLYLKDVINRLNDLRGKGMASLYS 97

Query: 76  WSC----KSGYVWNDLSENDVVYPAEGYEYVLKASQLVD 111
           WS     K+G+VW+DLSE+D ++P +G EYVLK S+++D
Sbjct: 98  WSSKRSYKNGFVWHDLSEDDFIFPVQGQEYVLKGSEVLD 136

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BLAST of CsaV3_UNG146140 vs. ExPASy Swiss-Prot
Match: A0A2K1JJ00 (Protein SOSEKI 1 OS=Physcomitrium patens OX=3218 GN=SOK1 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.2e-15
Identity = 47/109 (43.12%), Postives = 69/109 (63.30%), Query Frame = 0


Query: 25  AQVFYYISRNGRLEQPHFLEIPLFPNH-PLRLKDVLDRLAVLRGNAMPFLYSWSCKSGY- 84
           AQV Y +S NG+LE PH +++    +   LRL+DV +RL  LRG+ +   +SWS K  Y 
Sbjct: 10  AQVLYQLSWNGKLEHPHIIDVEYASDQGGLRLRDVKERLTRLRGHGINDSFSWSYKRTYS 69

Query: 85  ---VWNDLSENDVVYPAEGY-EYVLKASQLVDLHASCEKLQQVHIPNNN 128
              +WNDLS++DV++P  G  EYVL+AS+L+D +    K   VH  ++N
Sbjct: 70  KTFIWNDLSDDDVIHPLCGSGEYVLRASELIDTNE--RKSCDVHSRHSN 116

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BLAST of CsaV3_UNG146140 vs. ExPASy TrEMBL
Match: A0A0A0KXS9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G027920 PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.0e-100
Identity = 181/185 (97.84%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD 60
           MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD
Sbjct: 1   MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLD 60

Query: 61  RLAVLRGNAMPFLYSWSC----KSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCE 120
           RLAVLRGNAMPFLYSWSC    KSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCE
Sbjct: 61  RLAVLRGNAMPFLYSWSCKRNYKSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCE 120

Query: 121 KLQQVHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNA 180
           KLQQVHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNA
Sbjct: 121 KLQQVHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYDDGDKNA 180

Query: 181 GEPPG 182
           GEPPG
Sbjct: 181 GEPPG 185

[Close]

BLAST of CsaV3_UNG146140 vs. ExPASy TrEMBL
Match: A0A6J1FUF7 (protein UPSTREAM OF FLC isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446977 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 3.0e-52
Identity = 124/199 (62.31%), Postives = 140/199 (70.35%), Query Frame = 0


Query: 1   MEEKDR-----DHHHRHHRRRD-------------SPTPMKKAQVFYYISRNGRLEQPHF 60
           MEE+ R     +  H  HRRR              +P PMKK QVFYY+SRNGRLEQPHF
Sbjct: 1   MEERCRATGGGEREHCRHRRRSTSPDRAKATTTTAAPPPMKKVQVFYYLSRNGRLEQPHF 60

Query: 61  LEIPLFPNHPLRLKDVLDRLAVLRGNAMPFLYSWSC----KSGYVWNDLSENDVVYPAEG 120
           LEI LFPN PLRLKDV+DRL +LRG AM  LYSWSC    K+GYVWNDLSEND+VYPA G
Sbjct: 61  LEISLFPNQPLRLKDVMDRLTLLRGKAMRSLYSWSCKRNYKTGYVWNDLSENDIVYPAGG 120

Query: 121 YEYVLKASQLVDLHASCEKLQQVHIPNNNPRQPVQEPNLPTKTRKQQLAPTPLPH---HP 175
            EYVLKAS+LVD     EKLQ++H    N R+PVQEPNL TKTRK QLAP+PL      P
Sbjct: 121 AEYVLKASELVDF--CSEKLQEIH-TGTNDRRPVQEPNLRTKTRKPQLAPSPLKELDDQP 180

[Close]

BLAST of CsaV3_UNG146140 vs. ExPASy TrEMBL
Match: A0A6J1IY41 (protein UPSTREAM OF FLC isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480256 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.8e-50
Identity = 110/160 (68.75%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 22  MKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLDRLAVLRGNAMPFLYSWSC--- 81
           MKK QVFYY+SRNGRLEQPHF+EI LFPN PLRLKDV+DRL VLRG AM  LY+WSC   
Sbjct: 1   MKKVQVFYYLSRNGRLEQPHFVEISLFPNQPLRLKDVMDRLTVLRGKAMRSLYAWSCKRN 60

Query: 82  -KSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCEKLQQVHIPNNNPRQPVQEPNL 141
            K+GYVWNDLSEND+VYPAEG EYVLKAS+LVD+    EK+Q++H    N R+PVQEPNL
Sbjct: 61  YKTGYVWNDLSENDIVYPAEGAEYVLKASELVDV--CSEKMQEIH-TGTNDRRPVQEPNL 120

Query: 142 PTKTRKQQLAPTPLPH---HPHSDLEYDEDEDYEYDDGDK 175
            +KTRK QLAP+PL       +SDL+YDE EDYE +D DK
Sbjct: 121 RSKTRKHQLAPSPLKELDDQLYSDLDYDEVEDYENEDVDK 157

[Close]

BLAST of CsaV3_UNG146140 vs. ExPASy TrEMBL
Match: A0A7N2M1T4 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.3e-39
Identity = 90/160 (56.25%), Postives = 115/160 (71.88%), Query Frame = 0


Query: 21  PMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLDRLAVLRGNAMPFLYSWSC-- 80
           P+KK QV YY+SRNG LE PH++E+    N PLRL+DV +RL VLRG  MP LYSWSC  
Sbjct: 31  PIKKVQVVYYLSRNGHLEHPHYMEVTHLVNQPLRLRDVTERLTVLRGKGMPSLYSWSCKR 90

Query: 81  --KSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCEKLQQVHIPNNNPRQPVQEPN 140
             KSGYVWNDL+END++YP+EG EYVLK S+LV+     E+ QQ+HI  NN +Q +QEPN
Sbjct: 91  SYKSGYVWNDLAENDIIYPSEGAEYVLKGSELVE--GCSERFQQLHI--NNGQQIIQEPN 150

Query: 141 LPTKTRKQQLAPTPLPHHPHSDLEYD--EDEDYEYDDGDK 175
              K  ++QLAP+P P     D EY+  E+E+ EY+DG+K
Sbjct: 151 YHPK--RKQLAPSPSPQREQEDQEYEEFEEEEEEYEDGEK 184

[Close]

BLAST of CsaV3_UNG146140 vs. ExPASy TrEMBL
Match: A0A2N9HLG3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40455 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.4e-36
Identity = 88/161 (54.66%), Postives = 112/161 (69.57%), Query Frame = 0


Query: 21  PMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLDRLAVLRGNAMPFLYSWSC-- 80
           P+KK QV YY+SRNG LE PH++E+    N PLRL+DV +RL VLRG  MP LYSWSC  
Sbjct: 29  PIKKVQVVYYLSRNGHLEHPHYMEVTHLANQPLRLRDVTERLTVLRGKGMPSLYSWSCKR 88

Query: 81  --KSGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCEKLQQVHIPNNNPRQPVQEPN 140
             KSGYVWNDL+END++YP+EG EYVLK S+LV+   S    QQVHI N   RQ +QEPN
Sbjct: 89  SYKSGYVWNDLAENDIIYPSEGAEYVLKGSELVE-GCSERFQQQVHITN---RQQIQEPN 148

Query: 141 LPTKTRKQQLAPTPL---PHHPHSDLEYDEDEDYEYDDGDK 175
              K  ++QLAP+P        + + E +E+E+ EY+DG+K
Sbjct: 149 FHPK--RKQLAPSPQREPEDQEYEEYEEEEEEEEEYEDGEK 183

[Close]

BLAST of CsaV3_UNG146140 vs. TAIR 10
Match: AT5G10150.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 115.2 bits (287), Expect = 6.2e-26
Identity = 70/174 (40.23%), Postives = 97/174 (55.75%), Query Frame = 0


Query: 8   HHHRHHRRRDSPTPMKK-----AQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLDRL 67
           +HH+H    +     KK      QV YY++RNG LE PHF+E+    N PLRL+DV++RL
Sbjct: 24  NHHQHDEELEEEVKTKKPIFRRVQVVYYLTRNGHLEHPHFIEVISPVNQPLRLRDVMNRL 83

Query: 68  AVLRGNAMPFLYSWSCK----SGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCEKL 127
            +LRG  M   Y+WSCK    +G+VWNDL+ENDV+YP++  EYVLK S++ D      K 
Sbjct: 84  TILRGKCMTSQYAWSCKRSYRNGFVWNDLAENDVIYPSDCAEYVLKGSEITD------KF 143

Query: 128 QQVHI--PNNNPRQPVQEPNLPTKTRKQQLAPTPLPHHPHSDLEYDEDEDYEYD 171
           Q+VH+  P +   Q   +  L     K Q              E +E+ED EY+
Sbjct: 144 QEVHVNRPLSGSIQEAPKSRLLRSKLKPQNRTASFDDAELYVGEEEEEEDGEYE 191

[Close]

BLAST of CsaV3_UNG146140 vs. TAIR 10
Match: AT3G46110.2 (Domain of unknown function (DUF966) )

HSP 1 Score: 111.7 bits (278), Expect = 6.9e-25
Identity = 52/97 (53.61%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 19  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLDRLAVLRGNAMPFLYSWSC 78
           P+  +   V YY+SRNGRL+ PHF+E+PL  ++ L LKDV++RL  LRGN M  LYSWS 
Sbjct: 14  PSRERIVPVVYYLSRNGRLDHPHFIEVPLSSHNGLYLKDVINRLNDLRGNGMACLYSWSS 73

Query: 79  ----KSGYVWNDLSENDVVYPAEGYEYVLKASQLVDL 112
               K+G+VW DLS+ D ++P  G EYVLK SQ++DL
Sbjct: 74  KRTYKNGFVWYDLSDEDFIFPVHGQEYVLKGSQILDL 110

[Close]

BLAST of CsaV3_UNG146140 vs. TAIR 10
Match: AT3G46110.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 111.7 bits (278), Expect = 6.9e-25
Identity = 52/97 (53.61%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 19  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLDRLAVLRGNAMPFLYSWSC 78
           P+  +   V YY+SRNGRL+ PHF+E+PL  ++ L LKDV++RL  LRGN M  LYSWS 
Sbjct: 14  PSRERIVPVVYYLSRNGRLDHPHFIEVPLSSHNGLYLKDVINRLNDLRGNGMACLYSWSS 73

Query: 79  ----KSGYVWNDLSENDVVYPAEGYEYVLKASQLVDL 112
               K+G+VW DLS+ D ++P  G EYVLK SQ++DL
Sbjct: 74  KRTYKNGFVWYDLSDEDFIFPVHGQEYVLKGSQILDL 110

[Close]

BLAST of CsaV3_UNG146140 vs. TAIR 10
Match: AT2G28150.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 108.2 bits (269), Expect = 7.6e-24
Identity = 55/118 (46.61%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 22  MKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLDRLAVLRGNAMPFLYSWSCK-- 81
           +KK Q+ YY+S+N +LE PHF+E+ +   + L L+DV++RL VLRG  M  +YSWS K  
Sbjct: 31  IKKVQIVYYLSKNRQLEHPHFMEVLISSPNGLYLRDVIERLNVLRGRGMASMYSWSSKRS 90

Query: 82  --SGYVWNDLSENDVVYPAEGYEYVLKASQLVDLHASCEKLQQVHIPNNNPRQPVQEP 136
             +G+VW+DLSE+D++ PA G EYVLK S+L D   S      V++   N +Q V EP
Sbjct: 91  YRNGFVWHDLSEDDLILPANGNEYVLKGSELFDESNSDHFSPIVNLATQNMKQIVVEP 148

[Close]

BLAST of CsaV3_UNG146140 vs. TAIR 10
Match: AT5G59790.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 104.8 bits (260), Expect = 8.4e-23
Identity = 49/99 (49.49%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 16  RDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKDVLDRLAVLRGNAMPFLYS 75
           R  P   +K  V YY+ RNG+L+ PHF+E+ L  +  L LKDV++RL  LRG  M  LYS
Sbjct: 38  RLKPVVNRKVPVVYYLCRNGQLDHPHFIEVTLSSHDGLYLKDVINRLNDLRGKGMASLYS 97

Query: 76  WSC----KSGYVWNDLSENDVVYPAEGYEYVLKASQLVD 111
           WS     K+G+VW+DLSE+D ++P +G EYVLK S+++D
Sbjct: 98  WSSKRSYKNGFVWHDLSEDDFIFPVQGQEYVLKGSEVLD 136

The following BLAST results are available for this feature:

BLAST of CsaV3_UNG146140 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8637152.1	1.1e-112	100.00	hypothetical protein CSA_004634 [Cucumis sativus] >KAE8637178.1 hypothetical pro...	[more]
KAE8637221.1	2.0e-111	100.00	hypothetical protein CSA_021616 [Cucumis sativus]	[more]
XP_031745651.1	5.9e-111	98.03	protein UPSTREAM OF FLC-like isoform X2 [Cucumis sativus] >XP_031745655.1 protei...	[more]
XP_011653119.2	6.1e-100	97.84	protein UPSTREAM OF FLC isoform X2 [Cucumis sativus]	[more]
XP_031745649.1	8.3e-81	67.90	uncharacterized protein LOC116406091 isoform X1 [Cucumis sativus] >XP_031745650....	[more]

BLAST of CsaV3_UNG146140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LX14	8.8e-25	40.23	Protein SOSEKI 2 OS=Arabidopsis thaliana OX=3702 GN=SOK2 PE=1 SV=1	[more]
Q8GY65	9.7e-24	53.61	Protein SOSEKI 4 OS=Arabidopsis thaliana OX=3702 GN=SOK4 PE=1 SV=1	[more]
Q8GYT8	1.1e-22	46.61	Protein SOSEKI 3 OS=Arabidopsis thaliana OX=3702 GN=SOK3 PE=1 SV=1	[more]
Q9FJF5	1.2e-21	49.49	Protein SOSEKI 5 OS=Arabidopsis thaliana OX=3702 GN=SOK5 PE=1 SV=1	[more]
A0A2K1JJ00	8.2e-15	43.12	Protein SOSEKI 1 OS=Physcomitrium patens OX=3218 GN=SOK1 PE=1 SV=1	[more]

BLAST of CsaV3_UNG146140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXS9	3.0e-100	97.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G027920 PE=3 SV=1	[more]
A0A6J1FUF7	3.0e-52	62.31	protein UPSTREAM OF FLC isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446977...	[more]
A0A6J1IY41	2.8e-50	68.75	protein UPSTREAM OF FLC isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480256 P...	[more]
A0A7N2M1T4	1.3e-39	56.25	Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A2N9HLG3	1.4e-36	54.66	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40455 PE=3 SV=1	[more]

BLAST of CsaV3_UNG146140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10150.1	6.2e-26	40.23	Domain of unknown function (DUF966)	[more]
AT3G46110.2	6.9e-25	53.61	Domain of unknown function (DUF966)	[more]
AT3G46110.1	6.9e-25	53.61	Domain of unknown function (DUF966)	[more]
AT2G28150.1	7.6e-24	46.61	Domain of unknown function (DUF966)	[more]
AT5G59790.1	8.4e-23	49.49	Domain of unknown function (DUF966)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010369	Protein SOSEKI	PFAM	PF06136	DUF966	coord: 26..130 e-value: 7.4E-47 score: 160.9
IPR010369	Protein SOSEKI	PANTHER	PTHR31083	UPSTREAM OF FLC PROTEIN (DUF966)	coord: 12..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR31083:SF18	PROTEIN UPSTREAM OF FLC	coord: 12..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_UNG146140.1	CsaV3_UNG146140.1	mRNA