CsaV3_7G035280 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G035280
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Protein PAF1-like protein
Location	chr7: 22295857 .. 22301158 (-)
RNA-Seq Expression	CsaV3_7G035280
Synteny	CsaV3_7G035280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTACCGGCCATATCCTCCTCAATCGTCTTTCGGTTCTGCTCCAGCTCAAAACTCTATTCCACCTCCATCTGCCCAATCCGCTTCCGTCTCATCCCAACAGCGAGGAGGAGCTACTACTCAATATAATCAGAATTGGGGTACTTACGCCGGTGATGCCTCTGCACCTCCTGCTCCTTCTTCATCCTATCCCCAAAATTACAACAACCAACTTCATCAAACTTCTAATTACCACCATCAACAGTATGGTCCTCCCAGAACACAACACCCTCCACCTCCTCCTCCTCCTCCTCACCAGTCCTATCCTTATGCACCTCAACCACCGCCCCCTCCTCCTCCTGATTCTTCCTATCCACCGCCTCCACCCCCACCAGCGACTTCACAGCCTCCTAATCTTTACTATCCTTCTTCACAGTATTCCCAGGGTAATCAAAACCAGCAGTCAATGCAGCCACCACCTCCGCCCTCATCTCCACCACCGAGTTCTTCAATCCCCCACCTCCCCCCCCAAATTCTCCCCCACCTCCATCAGCCTCTCAGCAAAAAGCAGAGGGTACAAACATGGGAGCACACGAACGCGATAAAGGAGTTCCCAAGGATCCCTCATATGGCAGGCGTGATCGTGAAAATTCAAATCATGATAAACACCAGAAGCATTCTGGTCCCCCAATGCCTCCCAAGAAAGCAAACGGTCCTTCAGGGAGAATGGAGACAGATGATGAGAAAAGACTGAGGAAGAAGAGAGAGTTCGAAAAACAAAGGCAAGATGAGAGGCACAGACACCATCTAAAAGAATCCCAAAACACTATACTGCAAAAGACCCAGATGTTATCTACTGGGAAGGTGCATGGATCAATTGTAGGATCCCGAATGGGGGAAAGGAAGGCTACTCCTTTTCTTAGTGGGGAGAGAATAGAAAATAGGTTGAAGAAGCCAACCACATTTTTGTGCAAGTTGAAGTGAGTATGTAGATATTTTTCATTGTTATGATCTGGTTTTAAGTCTTGTCTATAATTGTTGACGTTTACTAAGAACTCTTTGGATGAGTGAATGAGCGGAATGCTCAGTTAATATTTATTCCTTGTATTGTTATTGTTTTCATTATCATAATTTTTTCATTCTATGTGATCAGGAAGGCATATCTTTATTAACACAAATTCACACCGCCCTTTTTCCCAGGGGATCGTTTTTAGTTTCAATCTATGGATTAATGTTCTGTAATAATCTCTAAAAACACCAATTATTTAATGCCCCTACCAATGTTTTCTGGTAGAAATGATATTTCATGCTTCTTCTCTTATCGATGTTCATTGATTTTTATATTCTTATGGCTAATTATGTTGTACTTTGACTTCCATGCATTTCAAAGATTCCGCAACGAGCTTCCAGATACAAGTGCTCAGCCGAAGCTCATGTCACTACGGAAAGAGAAAGATCAGTATGTATTCTATTCTTTTCCTTCCAAAGTTTGCATAGGTGTGCAACTTGTGCTGATACATGAGGTGCTTCTCCATTTTTTGTTCTTTTCATCCCTTTATACTGCCCCTCATTTTGCTAGATACAATTATGTTATTTTGACGATCTATAACTATTTGACGCTGTACAAAAATTATCCACCTTGTGATAGTTATTAACAACTGAAAATGTAGAAATTAAGTGAAACATCTCTTGCTAGACAAAAAGGGAATTGATGAAGGTAAGCCAGAGCACTAGTTGTAATATTGAGAACTCAGAAAGCTAAAGTTTGATGTATTTGCTTATAAATGTTCACCTAGACAGACAACCTTACTTGAATAGGATCAGTTTTATAGGTTGTAGAACCATTTCCATGAGTTCTAAAAAGGTTCGCCTAGATAGTCTTTTATCCGAAGTTGGAAAAAAATGTAGTTTTGACAGCTTAGCTCTCGTATTTATTCTTCTATGCAAACCATTACTTGAAAGACATAAAGGGATCCTATGTCACATGTGTATTAGTATTTAAGATTGGTAGTCACCATATTGTGTGAAAAAATGGTTTGAATTACCACTGTGTTTAGGTTGTATTGGTTGTTTTCATTGAAAGTATTAATTTCTTGGTATTACGGTCCTTTTTCTCTTTTATTATCTTACCAATAGGTTTGACTTAAATAATAAGAGGTAGCATCTTCTATTTTTTTGGATGTTGCAGCTATACAAGATATACAATTACATCACTAGAGAAAACCTACAAACCTCAGCTTTATGTAGAGCCAGATCTTGGAATACCTCTCGATTTGCTTGACCTCAGTGTATACAAGTATGGATCATATAAATATTTTCTTTATAACGTGACTATTTTTTGTATAAACTTATTCTAACTTTTCTCTATGCATATGCTTACTAGCCCTTCTAGTGTTAGAATGCCCCTTGCTCCTGAAGATGAGGAATTATTACGTGATGATGTATTGAAAACTCCAGTTAAAAAAGATGGTGGTATAAAAAGAAAAGAGCGTCCTACTGATAAAGGTGTTGCCTGGCTTGTTAAGACACAGTACATTTCTCCTCTCAGCATTGAATCTGCGAAGCAGGTATTTCTATTGAAGTTTTATTGTACAAATAATTATGCTGCAGTTGTATCAGTGTTAACAAGGGTTGCATCTGCAGTCTTTGACTGAAAAACAGGCAAAAGAACTGCGAGAAATGAAGGGAGGACGCAATATTCTTGAGAACCTCAATAATAGGTTTGTCTTTTTCCTTTAAGAGAAGGAAAAAAAACCTAAGCTATATGTGGTGTGATTATATTCTTTACTGAGTGATCTTTATATTTTCCAGGGAAAGACAAATTAAGGAAATTGAGGCATCATTTGAGGCATGCAAGTCACGCCCTATTCACGCCACTAATAAGAATTTATATCCTGTTGAGGTTTTACCTCTTCTACCTGATTTTGATAGGTACAAAATAATTCAATCCTTGATTATGAATTTGGTAAATAAAATAATGGATTTATTATAGTACATTAGCGCAAGAATTTTGTGTCAGCTTCTCCTCAAGGCTGCAATACAGTGTTAGGATTTAAATTGCAATTAGGGTGCATTCCTTCTTCTTTTGGCACTGGATATTTTCGTATAGGTTCGCTTTTCAATAAAATTTGATTGCTAGCAACAATATAATCTTTGACAATGGTCTTACAAGTTACATCATGTGCCGGAACATCTAAATTTTGACATTCCTATGACTTGCAACAATTGGATGAAGTCTGGAGGCAGTGTGCCTTATATCACATTCGTCAATGTATACTTTCTTATTCAAAAGAATATTGTTATTGCATCAGGTATGATGATCCATTTGTTGTGGTGGCGTTTGATAGTGCTCCCACAGCTGATTCAGAGACTTTCAACAAGTTAGACCAATCCATCCGTGACGCTCATGAATCACAGGTCAGTTTTGAGGTTATTTATACTTCAAATATATTATTGAAAGGCTGATTGCTAAAGTTCATTTCATTAACACTTACATATATTAATCATTTTCTTACCACAAAAGAAAATATTGGTTTTAGTTTAAATCTTGGGTCTTGTTCGAGTAGAATTTGTGGATTAGATTGAGTAGGTTAGGAGGTATTTCGGACTTAATACAAATGTTCAAGTTGGGAATTGGCCAACTTCAACAACCCTAGTTCACTGATGATCCCCACTTGCTTGAATTGGTAAGGTCATCTATTTAAAAAAATTCTATAAAAAAATAGTGAGATAATACAGTAGTTTTTGGAAGCAATAACTAAATTATTTAACTTGCCCCTTTGGGGACCTCCGATAGAATTAAGTTGTGTTACTCAACGCCTTTAGATTTGAATTGGTTATTTTCTTGAAATTACTGGAGAGTAAGAAAACTTGAGAAAGAAACCATTGGGTGGAAATGGAGTTAATTTAAAAAGGTACGTATGTAACAAGTTTTCACAATATGGTATGTCTGTGATCAGAGTTAATTTGAGTAAGGCCCAATCTTGGTACCATACCAGATTACCAATGATAAGTTTACTTTTCAGATACAAGTTGATAACATTTATCAACTTCCTTGATCAATTAATAAAACTTTTCTATTTGGTGCTGTACATTTTTTTTTATAAGGAAGAATTTCCAACTGAAGATTAGGGAGGATTGTTAACATGCAGTATGAAGTAGTTAGTTCTAACGCTGCTTGTTGATCCTTTTCAGGCGATAATGAAAAGTTATATGGCAACAAGCTCAGATCCCTCAAAACCTGAGAAATTTCTTGCGTACATGGTTCCCTCTCCAGATGAGGTTGGTGGTCAATGAATAATATCTTTTAATTTTAGTATTTTTCATTGGAATTTTAGTTTTATGTTTTTCTTATCTTGCCTAAAGCCAAAGAGAAATGAAGTCCGTAGCATTCTTAGCTCCCTTCGCTATTCCAAAAACAAATGGAAGATTTAAAACATAGCTTAATCTACTACGCAAAGATTAACAGCACCTACACCTTGTGTTTACATTCCTTTTTATGAAATATCTCTACTAGGCAAAGATTTCACCTCTCTCTCTCGCATACACTCTGATGTGAAGCAAAGTCAATAAATAAGTATCATTCCTATTTGGAGGGAGACATGTTTATTCTCTTGTTTTGATTCAGCTTTCGAAGGATATTTACGATGAACAAGAAGATGTCTCTTATTCCTGGGTTCGTGAGTATCATTGGGATGTAAGTGAAGGCATTTTTAATTAGTGTACAACACTAAGTTAGAATTTCGACTGCATGTTTGGTGAGGTTTCTGATGACACTTGTGACAGGTACGGGGTGACAATGTGGACGACCCCACTACATATCTCGTTTCATTTGATGATGCAGAAGCTCGTTATGTGGTATTCATCACATCTTTTCTATTTCTTTATAATTCTTTGGACTTCACATATGTATTCATGGGCTTGTTCTTGGTTTAGAGATTTACTCATCTATTAAATTTCAATTGTAGCCACTTCCCACAAAGCTTGTTCTTAGAAAAAAGAGGGCTAAAGAAGGGAGATCCAGTGATGAGGTTGAACATTTTCCAGCACCTGCAAGAGTGACTGTAAGGAGAAGACCAACCGTAGCTACTTTGGAAGTGAAGGATCCTGGGGTATAGTCTAAGTTTATGAACTTCAATTAGTAGTATTACCCATGTTTATGGTTATTGGCGATCTTTTTTTAACTTTGCTGCTTTCAGATTTACTCAAATTCAAAAAGAGGATCAGATATTGAAGATGGTATAGGAAGATCGCATAAACATGATAGACATCAAGACATGGATCAATTCAGTGGAGCTGAAGACGAGATGTCTGATTGA

mRNA sequence

ATGGCTTCTTACCGGCCATATCCTCCTCAATCGTCTTTCGGTTCTGCTCCAGCTCAAAACTCTATTCCACCTCCATCTGCCCAATCCGCTTCCGTCTCATCCCAACAGCGAGGAGGAGCTACTACTCAATATAATCAGAATTGGGGTACTTACGCCGGTGATGCCTCTGCACCTCCTGCTCCTTCTTCATCCTATCCCCAAAATTACAACAACCAACTTCATCAAACTTCTAATTACCACCATCAACAGTATGCAGTCAATGCAGCCACCACCTCCGCCCTCATCTCCACCACCGAGTTCTTCAATCCCCCACCTCCCCCCCCAAATTCTCCCCCACCTCCATCAGCCTCTCAGCAAAAAGCAGAGGGTACAAACATGGGAGCACACGAACGCGATAAAGGAGTTCCCAAGGATCCCTCATATGGCAGGCGTGATCGTGAAAATTCAAATCATGATAAACACCAGAAGCATTCTGGTCCCCCAATGCCTCCCAAGAAAGCAAACGGTCCTTCAGGGAGAATGGAGACAGATGATGAGAAAAGACTGAGGAAGAAGAGAGAGTTCGAAAAACAAAGGCAAGATGAGAGGCACAGACACCATCTAAAAGAATCCCAAAACACTATACTGCAAAAGACCCAGATGTTATCTACTGGGAAGGTGCATGGATCAATTGTAGGATCCCGAATGGGGGAAAGGAAGGCTACTCCTTTTCTTAGTGGGGAGAGAATAGAAAATAGGTTGAAGAAGCCAACCACATTTTTGTGCAAGTTGAAATTCCGCAACGAGCTTCCAGATACAAGTGCTCAGCCGAAGCTCATGTCACTACGGAAAGAGAAAGATCACTATACAAGATATACAATTACATCACTAGAGAAAACCTACAAACCTCAGCTTTATGTAGAGCCAGATCTTGGAATACCTCTCGATTTGCTTGACCTCAGTGTATACAACCCTTCTAGTGTTAGAATGCCCCTTGCTCCTGAAGATGAGGAATTATTACGTGATGATGTATTGAAAACTCCAGTTAAAAAAGATGGTGGTATAAAAAGAAAAGAGCGTCCTACTGATAAAGGTGTTGCCTGGCTTGTTAAGACACAGTACATTTCTCCTCTCAGCATTGAATCTGCGAAGCAGTCTTTGACTGAAAAACAGGCAAAAGAACTGCGAGAAATGAAGGGAGGACGCAATATTCTTGAGAACCTCAATAATAGGGAAAGACAAATTAAGGAAATTGAGGCATCATTTGAGGCATGCAAGTCACGCCCTATTCACGCCACTAATAAGAATTTATATCCTGTTGAGGTTTTACCTCTTCTACCTGATTTTGATAGGTATGATGATCCATTTGTTGTGGTGGCGTTTGATAGTGCTCCCACAGCTGATTCAGAGACTTTCAACAAGTTAGACCAATCCATCCGTGACGCTCATGAATCACAGGCGATAATGAAAAGTTATATGGCAACAAGCTCAGATCCCTCAAAACCTGAGAAATTTCTTGCGTACATGGTTCCCTCTCCAGATGAGCTTTCGAAGGATATTTACGATGAACAAGAAGATGTCTCTTATTCCTGGGTTCGTGAGTATCATTGGGATGTACGGGGTGACAATGTGGACGACCCCACTACATATCTCGTTTCATTTGATGATGCAGAAGCTCGTTATGTGCCACTTCCCACAAAGCTTGTTCTTAGAAAAAAGAGGGCTAAAGAAGGGAGATCCAGTGATGAGGTTGAACATTTTCCAGCACCTGCAAGAGTGACTGTAAGGAGAAGACCAACCGTAGCTACTTTGGAAGTGAAGGATCCTGGGATTTACTCAAATTCAAAAAGAGGATCAGATATTGAAGATGGTATAGGAAGATCGCATAAACATGATAGACATCAAGACATGGATCAATTCAGTGGAGCTGAAGACGAGATGTCTGATTGA

Coding sequence (CDS)

ATGGCTTCTTACCGGCCATATCCTCCTCAATCGTCTTTCGGTTCTGCTCCAGCTCAAAACTCTATTCCACCTCCATCTGCCCAATCCGCTTCCGTCTCATCCCAACAGCGAGGAGGAGCTACTACTCAATATAATCAGAATTGGGGTACTTACGCCGGTGATGCCTCTGCACCTCCTGCTCCTTCTTCATCCTATCCCCAAAATTACAACAACCAACTTCATCAAACTTCTAATTACCACCATCAACAGTATGCAGTCAATGCAGCCACCACCTCCGCCCTCATCTCCACCACCGAGTTCTTCAATCCCCCACCTCCCCCCCCAAATTCTCCCCCACCTCCATCAGCCTCTCAGCAAAAAGCAGAGGGTACAAACATGGGAGCACACGAACGCGATAAAGGAGTTCCCAAGGATCCCTCATATGGCAGGCGTGATCGTGAAAATTCAAATCATGATAAACACCAGAAGCATTCTGGTCCCCCAATGCCTCCCAAGAAAGCAAACGGTCCTTCAGGGAGAATGGAGACAGATGATGAGAAAAGACTGAGGAAGAAGAGAGAGTTCGAAAAACAAAGGCAAGATGAGAGGCACAGACACCATCTAAAAGAATCCCAAAACACTATACTGCAAAAGACCCAGATGTTATCTACTGGGAAGGTGCATGGATCAATTGTAGGATCCCGAATGGGGGAAAGGAAGGCTACTCCTTTTCTTAGTGGGGAGAGAATAGAAAATAGGTTGAAGAAGCCAACCACATTTTTGTGCAAGTTGAAATTCCGCAACGAGCTTCCAGATACAAGTGCTCAGCCGAAGCTCATGTCACTACGGAAAGAGAAAGATCACTATACAAGATATACAATTACATCACTAGAGAAAACCTACAAACCTCAGCTTTATGTAGAGCCAGATCTTGGAATACCTCTCGATTTGCTTGACCTCAGTGTATACAACCCTTCTAGTGTTAGAATGCCCCTTGCTCCTGAAGATGAGGAATTATTACGTGATGATGTATTGAAAACTCCAGTTAAAAAAGATGGTGGTATAAAAAGAAAAGAGCGTCCTACTGATAAAGGTGTTGCCTGGCTTGTTAAGACACAGTACATTTCTCCTCTCAGCATTGAATCTGCGAAGCAGTCTTTGACTGAAAAACAGGCAAAAGAACTGCGAGAAATGAAGGGAGGACGCAATATTCTTGAGAACCTCAATAATAGGGAAAGACAAATTAAGGAAATTGAGGCATCATTTGAGGCATGCAAGTCACGCCCTATTCACGCCACTAATAAGAATTTATATCCTGTTGAGGTTTTACCTCTTCTACCTGATTTTGATAGGTATGATGATCCATTTGTTGTGGTGGCGTTTGATAGTGCTCCCACAGCTGATTCAGAGACTTTCAACAAGTTAGACCAATCCATCCGTGACGCTCATGAATCACAGGCGATAATGAAAAGTTATATGGCAACAAGCTCAGATCCCTCAAAACCTGAGAAATTTCTTGCGTACATGGTTCCCTCTCCAGATGAGCTTTCGAAGGATATTTACGATGAACAAGAAGATGTCTCTTATTCCTGGGTTCGTGAGTATCATTGGGATGTACGGGGTGACAATGTGGACGACCCCACTACATATCTCGTTTCATTTGATGATGCAGAAGCTCGTTATGTGCCACTTCCCACAAAGCTTGTTCTTAGAAAAAAGAGGGCTAAAGAAGGGAGATCCAGTGATGAGGTTGAACATTTTCCAGCACCTGCAAGAGTGACTGTAAGGAGAAGACCAACCGTAGCTACTTTGGAAGTGAAGGATCCTGGGATTTACTCAAATTCAAAAAGAGGATCAGATATTGAAGATGGTATAGGAAGATCGCATAAACATGATAGACATCAAGACATGGATCAATTCAGTGGAGCTGAAGACGAGATGTCTGATTGA

Protein sequence

MASYRPYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPPAPSSSYPQNYNNQLHQTSNYHHQQYAVNAATTSALISTTEFFNPPPPPPNSPPPPSASQQKAEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKRLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEACKSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHESQAIMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVDDPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLEVKDPGIYSNSKRGSDIEDGIGRSHKHDRHQDMDQFSGAEDEMSD*

Homology

[Close]

BLAST of CsaV3_7G035280 vs. NCBI nr
Match: KAE8646532.1 (hypothetical protein Csa_015972 [Cucumis sativus])

HSP 1 Score: 1255.4 bits (3247), Expect = 0.0e+00
Identity = 642/642 (100.00%), Postives = 642/642 (100.00%), Query Frame = 0


Query: 1   MASYRPYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPPA 60
           MASYRPYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPPA
Sbjct: 1   MASYRPYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPPA 60

Query: 61  PSSSYPQNYNNQLHQTSNYHHQQYAVNAATTSALISTTEFFNPPPPPPNSPPPPSASQQK 120
           PSSSYPQNYNNQLHQTSNYHHQQYAVNAATTSALISTTEFFNPPPPPPNSPPPPSASQQK
Sbjct: 61  PSSSYPQNYNNQLHQTSNYHHQQYAVNAATTSALISTTEFFNPPPPPPNSPPPPSASQQK 120

Query: 121 AEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEK 180
           AEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEK
Sbjct: 121 AEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEK 180

Query: 181 RLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFLSG 240
           RLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFLSG
Sbjct: 181 RLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFLSG 240

Query: 241 ERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYV 300
           ERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYV
Sbjct: 241 ERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYV 300

Query: 301 EPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKGVA 360
           EPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKGVA
Sbjct: 301 EPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKGVA 360

Query: 361 WLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEACKS 420
           WLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEACKS
Sbjct: 361 WLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEACKS 420

Query: 421 RPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHESQA 480
           RPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHESQA
Sbjct: 421 RPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHESQA 480

Query: 481 IMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVDDP 540
           IMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVDDP
Sbjct: 481 IMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVDDP 540

Query: 541 TTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLEVK 600
           TTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLEVK
Sbjct: 541 TTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLEVK 600

Query: 601 DPGIYSNSKRGSDIEDGIGRSHKHDRHQDMDQFSGAEDEMSD 643
           DPGIYSNSKRGSDIEDGIGRSHKHDRHQDMDQFSGAEDEMSD
Sbjct: 601 DPGIYSNSKRGSDIEDGIGRSHKHDRHQDMDQFSGAEDEMSD 642

[Close]

BLAST of CsaV3_7G035280 vs. NCBI nr
Match: XP_004141783.2 (LOW QUALITY PROTEIN: protein PAF1 homolog [Cucumis sativus])

HSP 1 Score: 1189.5 bits (3076), Expect = 0.0e+00
Identity = 624/706 (88.39%), Postives = 630/706 (89.24%), Query Frame = 0


Query: 1   MASYRPYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPPA 60
           MASYRPYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPPA
Sbjct: 1   MASYRPYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPPA 60

Query: 61  PSSSYPQNYNNQLHQTSNYHHQQYA----------------------------------- 120
           PSSSYPQNYNNQLHQTSNYHHQQY                                    
Sbjct: 61  PSSSYPQNYNNQLHQTSNYHHQQYGPPRTQHPPPPPPPPHQSYPYAPQPPPPPPPDSSYP 120

Query: 121 ------VNAATTSALISTTEFFN-----------------------PPPPPPNSPPPPSA 180
                   +   +    ++++                         PPPPPPNSPPPPSA
Sbjct: 121 PPPPPPATSQPPNLYYPSSQYSQGNQNQQSMQPPPPPSSPPPSSSXPPPPPPNSPPPPSA 180

Query: 181 SQQKAEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMET 240
           SQQKAEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMET
Sbjct: 181 SQQKAEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMET 240

Query: 241 DDEKRLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATP 300
           DDEKRLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATP
Sbjct: 241 DDEKRLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATP 300

Query: 301 FLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKP 360
           FLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKP
Sbjct: 301 FLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKP 360

Query: 361 QLYVEPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTD 420
           QLYVEPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTD
Sbjct: 361 QLYVEPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTD 420

Query: 421 KGVAWLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFE 480
           KGVAWLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFE
Sbjct: 421 KGVAWLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFE 480

Query: 481 ACKSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAH 540
           ACKSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAH
Sbjct: 481 ACKSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAH 540

Query: 541 ESQAIMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDN 600
           ESQAIMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDN
Sbjct: 541 ESQAIMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDN 600

Query: 601 VDDPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVAT 643
           VDDPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVAT
Sbjct: 601 VDDPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVAT 660

[Close]

BLAST of CsaV3_7G035280 vs. NCBI nr
Match: KAA0051046.1 (protein PAF1-like protein [Cucumis melo var. makuwa] >TYK03841.1 protein PAF1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1159.1 bits (2997), Expect = 0.0e+00
Identity = 609/705 (86.38%), Postives = 620/705 (87.94%), Query Frame = 0


Query: 1   MASYRPYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPPA 60
           MASYRPYPPQSSFGSAPAQNSIPPP +QSAS SSQQRGGATTQYNQNWG YAGDAS PPA
Sbjct: 1   MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPA 60

Query: 61  PSSSYPQNYNNQLHQTSNYHHQQYA----------------------------------- 120
           PSSSYPQNYNNQLHQTSNYHHQQY                                    
Sbjct: 61  PSSSYPQNYNNQLHQTSNYHHQQYGTPRTQHPPPPPPHQSYPYAPQPPPPPPPDSSYPPP 120

Query: 121 ----VNAATTSALISTTEFFN-----------------------PPPPPPNSPPPPSASQ 180
                 +   +    ++++                         PPPPPPNSPPPPSASQ
Sbjct: 121 PPPPAPSQPPNLYYPSSQYSQGNQNQQSMQPPPPPSSPPPSSSIPPPPPPNSPPPPSASQ 180

Query: 181 QKAEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDD 240
           QKAEG NMGAHERDKGV KDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDD
Sbjct: 181 QKAEGKNMGAHERDKGVSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDD 240

Query: 241 EKRLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFL 300
           EK+LRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFL
Sbjct: 241 EKKLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFL 300

Query: 301 SGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQL 360
           SGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQL
Sbjct: 301 SGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQL 360

Query: 361 YVEPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKG 420
           YVEPDLGIPLDLLDLSVYNP SVR+PLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKG
Sbjct: 361 YVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKG 420

Query: 421 VAWLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEAC 480
           VAWLVKTQYISPLSIES KQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEAC
Sbjct: 421 VAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEAC 480

Query: 481 KSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHES 540
           KSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHES
Sbjct: 481 KSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHES 540

Query: 541 QAIMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVD 600
           QAIMKSYMAT SDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVD
Sbjct: 541 QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVD 600

Query: 601 DPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLE 643
           DPTTYLVSFDD+EARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLE
Sbjct: 601 DPTTYLVSFDDSEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLE 660

[Close]

BLAST of CsaV3_7G035280 vs. NCBI nr
Match: XP_008462415.1 (PREDICTED: LOW QUALITY PROTEIN: protein PAF1 homolog [Cucumis melo])

HSP 1 Score: 1156.7 bits (2991), Expect = 0.0e+00
Identity = 608/705 (86.24%), Postives = 619/705 (87.80%), Query Frame = 0


Query: 1   MASYRPYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPPA 60
           MASYRPYPPQSSFGSAPAQNSIPPP +QSAS SSQQRGGATTQYNQNWG YAGDAS PPA
Sbjct: 1   MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASVPPA 60

Query: 61  PSSSYPQNYNNQLHQTSNYHHQQYA----------------------------------- 120
           PSSSYPQNYNNQLHQTSNYHHQQY                                    
Sbjct: 61  PSSSYPQNYNNQLHQTSNYHHQQYGTPRTQHPPPPPPHQSYPYAPQPPPPPPPDSSYPPP 120

Query: 121 ----VNAATTSALISTTEFFN-----------------------PPPPPPNSPPPPSASQ 180
                 +   +    ++++                         PPPPPPNSPPPPSASQ
Sbjct: 121 PPPPAPSQPPNLYYPSSQYSQGNQNQQSMQPPPPPSSPPPSSSIPPPPPPNSPPPPSASQ 180

Query: 181 QKAEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDD 240
           QKAEG NMGAHERDKGV KDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDD
Sbjct: 181 QKAEGKNMGAHERDKGVSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDD 240

Query: 241 EKRLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFL 300
           EK+LRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFL
Sbjct: 241 EKKLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFL 300

Query: 301 SGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQL 360
           SGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQL
Sbjct: 301 SGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQL 360

Query: 361 YVEPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKG 420
           YVEPDLGIPLDLLDLSVYNP SVR+PLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKG
Sbjct: 361 YVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKG 420

Query: 421 VAWLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEAC 480
           VAWLVKTQYISPLSIES KQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEAC
Sbjct: 421 VAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEAC 480

Query: 481 KSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHES 540
           KSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHES
Sbjct: 481 KSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHES 540

Query: 541 QAIMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVD 600
           QAIMKSYMAT SDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVD
Sbjct: 541 QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVD 600

Query: 601 DPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLE 643
           DPTTYLVSFDD+EARYVPLPTKLVL KKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLE
Sbjct: 601 DPTTYLVSFDDSEARYVPLPTKLVLXKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLE 660

[Close]

BLAST of CsaV3_7G035280 vs. NCBI nr
Match: XP_038898523.1 (protein PAF1 homolog [Benincasa hispida])

HSP 1 Score: 1120.9 bits (2898), Expect = 0.0e+00
Identity = 589/694 (84.87%), Postives = 602/694 (86.74%), Query Frame = 0


Query: 1   MASYRPYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPPA 60
           MASYRPYPPQSSFG AP QN +PPP  QSASV +QQRGG  +QYNQNWG Y GD S PPA
Sbjct: 1   MASYRPYPPQSSFGPAPGQNPVPPPPTQSASVPAQQRGGG-SQYNQNWGGYGGDGSMPPA 60

Query: 61  PSSSYPQNYNNQLHQTSNYHHQQYAVNAATTSALISTTEFFN------------------ 120
            SSSYPQNY NQ HQ+SNYH Q Y    +         + +                   
Sbjct: 61  QSSSYPQNY-NQAHQSSNYHQQHYGPPRSQHPPPPPPNQSYPYAPQPPPPPPDSSYPPPP 120

Query: 121 ----------------------------------PPPPPPNSPPPPSASQQKAEGTNMGA 180
                                             PPPPPPNSPPP SA QQKAEGTNMGA
Sbjct: 121 PPPAPSQPPNLYYPPSQSMQPPPPPSSPPPSSSIPPPPPPNSPPPLSAPQQKAEGTNMGA 180

Query: 181 HERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDEKRLRKKREF 240
           HERDKGV KDPSYGRRDRENSNHDKHQ+HSGPPMPPKKANGPSGRMETDDEKRLRKKREF
Sbjct: 181 HERDKGVSKDPSYGRRDRENSNHDKHQRHSGPPMPPKKANGPSGRMETDDEKRLRKKREF 240

Query: 241 EKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFLSGERIENRLK 300
           EKQRQDERHRHHLKESQNTILQKTQMLSTGK HGSIVGSRMGERKATPFLSGERIENRLK
Sbjct: 241 EKQRQDERHRHHLKESQNTILQKTQMLSTGKGHGSIVGSRMGERKATPFLSGERIENRLK 300

Query: 301 KPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPL 360
           KPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPL
Sbjct: 301 KPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPL 360

Query: 361 DLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYI 420
           DLLDLSVYNP SVR+PLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYI
Sbjct: 361 DLLDLSVYNPPSVRIPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYI 420

Query: 421 SPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEACKSRPIHATNK 480
           SPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEACKSRP+HATNK
Sbjct: 421 SPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEACKSRPVHATNK 480

Query: 481 NLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHESQAIMKSYMAT 540
           NLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRD HESQAIMKSYMAT
Sbjct: 481 NLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDTHESQAIMKSYMAT 540

Query: 541 SSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVDDPTTYLVSFD 600
            SDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVDDPTTYLVSFD
Sbjct: 541 GSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVDDPTTYLVSFD 600

Query: 601 DAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLEVKDPGIYSNS 643
           D EARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLEVKDPG+YSNS
Sbjct: 601 DTEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLEVKDPGVYSNS 660

[Close]

BLAST of CsaV3_7G035280 vs. ExPASy Swiss-Prot
Match: F4HQA1 (Protein PAF1 homolog OS=Arabidopsis thaliana OX=3702 GN=VIP2 PE=1 SV=1)

HSP 1 Score: 616.7 bits (1589), Expect = 3.0e-175
Identity = 366/651 (56.22%), Postives = 445/651 (68.36%), Query Frame = 0


Query: 1   MASYR-PYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPP 60
           MASYR PYPP       P+QNS+ PP    +          + Q       Y+     PP
Sbjct: 1   MASYRPPYPP---LPQPPSQNSLAPPPPPPSLPPPVPPPPPSHQ------PYSYPPPPPP 60

Query: 61  APSSSYPQNYNNQLHQTSNYHHQQYAVNAATTSALISTTEFFNPPPPPPNSPPPPSASQQ 120
            P + Y Q            H+ Q+    A             PPPPPP++PPP      
Sbjct: 61  PPHAYYQQ----------GPHYPQFNQLQAP------------PPPPPPSAPPPLVPDPP 120

Query: 121 KAEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDE 180
           + +G N    + +KG  K    GRR+R   +  KH   S  P         S ++ET++E
Sbjct: 121 RHQGPN----DHEKGASK--QVGRRERAKPDPSKHHHRSHLP--------HSKKIETEEE 180

Query: 181 KRLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFLS 240
           +RLRKKRE EKQRQDE+HR  +K S  + + K                   E+K TP L+
Sbjct: 181 RRLRKKRELEKQRQDEKHRQQMKNSHKSQMPK---------------GHTEEKKPTPLLT 240

Query: 241 GERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLY 300
            +R+ENRLKKPTTF+CKLKFRNELPD SAQ KLM+++++KD +T+YTITSLEK +KP+++
Sbjct: 241 TDRVENRLKKPTTFICKLKFRNELPDPSAQLKLMTIKRDKDQFTKYTITSLEKLWKPKIF 300

Query: 301 VEPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKGV 360
           VEPDLGIPLDLLDLSVYNP  V+ PLAPEDEELLRDD   TP+KKD GI+RKERPTDKG+
Sbjct: 301 VEPDLGIPLDLLDLSVYNPPKVKAPLAPEDEELLRDDDAVTPIKKD-GIRRKERPTDKGM 360

Query: 361 AWLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEACK 420
           +WLVKTQYIS ++ ESA+QSLTEKQAKELREMKGG NIL NLNNRERQIK+IEASFEACK
Sbjct: 361 SWLVKTQYISSINNESARQSLTEKQAKELREMKGGINILHNLNNRERQIKDIEASFEACK 420

Query: 421 SRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHESQ 480
           SRP+HATNKNL PVEVLPLLP FDRYD+ FVV  FD AP ADSE F KLD SIRDAHES+
Sbjct: 421 SRPVHATNKNLQPVEVLPLLPYFDRYDEQFVVANFDGAPIADSEFFGKLDPSIRDAHESR 480

Query: 481 AIMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVDD 540
           AI+KSY+   SD + PEKFLAYMVPS DELSKDI+DE E++SY+WVREY WDV+  N +D
Sbjct: 481 AILKSYVVAGSDTANPEKFLAYMVPSLDELSKDIHDENEEISYTWVREYLWDVQ-PNAND 540

Query: 541 PTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLEV 600
           P TYLVSFD+  A Y+PLP +L LRKKRA+EGRSSDE+EHFP P+RVTVRRR TV+ +E 
Sbjct: 541 PGTYLVSFDNGTASYLPLPMRLNLRKKRAREGRSSDEIEHFPVPSRVTVRRRSTVSVIEH 589

Query: 601 KDPGIY-------SNSKRGSDIEDGIGRSHKHDRHQDMDQFS-GAEDEMSD 643
           KD G+Y       S+  R  + E G+GRS KH+  QD +Q+S G ED+ S+
Sbjct: 601 KDSGVYSSRVGASSSKMRRLEDEGGLGRSWKHEPEQDANQYSDGNEDDYSE 589

[Close]

BLAST of CsaV3_7G035280 vs. ExPASy Swiss-Prot
Match: Q4U0S5 (RNA polymerase II-associated factor 1 homolog OS=Danio rerio OX=7955 GN=paf1 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.0e-26
Identity = 104/339 (30.68%), Postives = 168/339 (49.56%), Query Frame = 0


Query: 254 LCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDL 313
           +C++K+ N LPD    PK ++   ++  + +Y  TSLEK +K +L  EPDLG+ +DL++ 
Sbjct: 30  VCRVKYGNSLPDIPFDPKFITYPFDQHRFVQYKATSLEKQHKHELLTEPDLGVTIDLINP 89

Query: 314 SVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSI 373
             Y      + L P DE+LL ++     ++     KR ++   K V W+ KT+YI   S 
Sbjct: 90  DTYR-IDPNILLDPADEKLLEEE-----IQAPSSSKRSQQHA-KVVPWMRKTEYI---ST 149

Query: 374 ESAKQSLTEKQAKELREMKGGRNILENL------NNRERQIKEIEASFE-ACKSRPIHAT 433
           E  +  ++ ++     E+K G ++ +         +R+ QI  IE +FE A KS   H +
Sbjct: 150 EFNRYGVSNEKV----EVKIGVSVKQQFTEEEIYKDRDSQIAAIEKTFEDAQKSISQHYS 209

Query: 434 NKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPT-ADSETFNKLDQSIRDAHESQAIMKSY 493
              + PVEVLP+ PDF  + +P   V FDS P   D      +D        SQA+++  
Sbjct: 210 KPRVTPVEVLPVFPDFKMWINPCAQVIFDSDPAPKDVSAPAGVDMM------SQAMIRGM 269

Query: 494 MATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDV--------SYSWVREYHWDVRGD-N 553
           M       +  +F+AY +P+ D + K   D +E++         Y   REY+W+V+   +
Sbjct: 270 M-----DEEGNQFVAYFLPNEDTMRKRKRDVEEELDYMPEEVYEYKIAREYNWNVKNKAS 329

Query: 554 VDDPTTYLVSFDDAEARYV-PLPTKLVLRKKRAKEGRSS 575
                 Y   F DA+  Y   L T++ L K+RAK G  S
Sbjct: 330 KGYEENYFFIFRDADGVYYNELETRVRLSKRRAKVGAQS 343

[Close]

BLAST of CsaV3_7G035280 vs. ExPASy Swiss-Prot
Match: Q4V886 (RNA polymerase II-associated factor 1 homolog OS=Rattus norvegicus OX=10116 GN=Paf1 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 5.1e-26
Identity = 116/412 (28.16%), Postives = 196/412 (47.57%), Query Frame = 0


Query: 254 LCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDL 313
           +C++K+ N LPD    PK ++   +++ + +Y  TSLEK +K  L  EPDLG+ +DL++ 
Sbjct: 30  VCRVKYCNSLPDIPFDPKFITYPFDQNRFVQYKATSLEKQHKHDLLTEPDLGVTIDLINP 89

Query: 314 SVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSI 373
             Y      + L P DE+LL +++ + P        ++ +   K V W+ KT+YI   S 
Sbjct: 90  DTYR-IDPNVLLDPADEKLLEEEI-QAPTS-----SKRSQQHAKVVPWMRKTEYI---ST 149

Query: 374 ESAKQSLTEKQAKELREMKGGRNILENL------NNRERQIKEIEASFE-ACKSRPIHAT 433
           E  +  +    + E  E+K G ++ +         +R+ QI  IE +FE A KS   H +
Sbjct: 150 EFNRYGI----SNEKPEVKIGVSVKQQFTEEEIYKDRDSQITAIEKTFEDAQKSISQHYS 209

Query: 434 NKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHE--SQAIMKS 493
              + PVEV+P+ PDF  + +P   V FDS P          D S   A E  SQA+++ 
Sbjct: 210 KPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPK-------DTSGAAALEMMSQAMIRG 269

Query: 494 YMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYS--------WVREYHWDVRGD- 553
            M       +  +F+AY +P  + L K   D++E++ Y+          REY+W+V+   
Sbjct: 270 MM-----DEEGNQFVAYFLPVEETLKKRKRDQEEEMDYAPDDVYDYKIAREYNWNVKNKA 329

Query: 554 NVDDPTTYLVSFDDAEARYV-PLPTKLVLRKKRAKEGRSSDE-----VEHFPAPARVTVR 613
           +      Y   F + +  Y   L T++ L K+RAK G  S       V+H     +    
Sbjct: 330 SKGYEENYFFIFREGDGVYYNELETRVRLSKRRAKAGVQSGTNALLVVKHRDMNEKELEA 389

Query: 614 RRPTVATLEVKDPGIYSNSKRGSDIEDGIGRSHKHDRHQDMDQFSGAEDEMS 642
           +    A LE  +P      +  ++ ++  G   +H++    ++  G+EDE S
Sbjct: 390 QEARKAQLENHEPEEEEEEEMEAEEKEAGGSDEEHEKGSSSEK-EGSEDERS 414

[Close]

BLAST of CsaV3_7G035280 vs. ExPASy Swiss-Prot
Match: Q5RAX0 (RNA polymerase II-associated factor 1 homolog OS=Pongo abelii OX=9601 GN=PAF1 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 4.4e-25
Identity = 115/412 (27.91%), Postives = 195/412 (47.33%), Query Frame = 0


Query: 254 LCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDL 313
           +C++K+ N LPD    PK ++   +++ + +Y  TSLEK +K  L  EPDLG+ +DL++ 
Sbjct: 30  VCRVKYCNSLPDIPFDPKFITYPFDQNRFVQYKATSLEKQHKHDLLTEPDLGVTIDLINP 89

Query: 314 SVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSI 373
             Y      + L P DE+LL +++ + P        ++ +   K V W+ KT+YI   S 
Sbjct: 90  DTYR-IDPNVLLDPADEKLLEEEI-QAPTS-----SKRSQQHAKVVPWMRKTEYI---ST 149

Query: 374 ESAKQSLTEKQAKELREMKGGRNILENL------NNRERQIKEIEASFE-ACKSRPIHAT 433
           E  +  +    + E  E+K G ++ +         +R+ QI  IE +FE A KS   H +
Sbjct: 150 EFNRYGI----SNEKPEVKIGVSVKQQFTEEEIYKDRDSQITAIEKTFEDAQKSISQHYS 209

Query: 434 NKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHE--SQAIMKS 493
              + PVEV+P+ PDF  + +P   V FDS P          D S   A E  SQA+++ 
Sbjct: 210 KPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPK-------DTSGAAALEMMSQAMIRG 269

Query: 494 YMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYS--------WVREYHWDVRGD- 553
            M       +  +F+AY +P  + L K   D++E++ Y+          REY+W+V+   
Sbjct: 270 MM-----DEEGNQFVAYFLPVEETLKKRKRDQEEEMDYAPDDVYDYKIAREYNWNVKNKA 329

Query: 554 NVDDPTTYLVSFDDAEARYV-PLPTKLVLRKKRAKEGRSSDE-----VEHFPAPARVTVR 613
           +      Y   F + +  Y   L T++ L K+RAK G  S       V+H     +    
Sbjct: 330 SKGYEENYFFIFREGDGVYYNELETRVRLSKRRAKAGVQSGTNALLVVKHRDMNEKELEA 389

Query: 614 RRPTVATLEVKDPGIYSNSKRGSDIEDGIGRSHKHDRHQDMDQFSGAEDEMS 642
           +    A LE  +P      +  ++ ++  G   + ++    ++  G+EDE S
Sbjct: 390 QEARKAQLENHEPEEEEEEEMETEEKEAGGSDEEQEKGSSSEK-EGSEDERS 414

[Close]

BLAST of CsaV3_7G035280 vs. ExPASy Swiss-Prot
Match: Q8N7H5 (RNA polymerase II-associated factor 1 homolog OS=Homo sapiens OX=9606 GN=PAF1 PE=1 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 5.7e-25
Identity = 115/412 (27.91%), Postives = 195/412 (47.33%), Query Frame = 0


Query: 254 LCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLYVEPDLGIPLDLLDL 313
           +C++K+ N LPD    PK ++   +++ + +Y  TSLEK +K  L  EPDLG+ +DL++ 
Sbjct: 30  VCRVKYCNSLPDIPFDPKFITYPFDQNRFVQYKATSLEKQHKHDLLTEPDLGVTIDLINP 89

Query: 314 SVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKGVAWLVKTQYISPLSI 373
             Y      + L P DE+LL +++ + P        ++ +   K V W+ KT+YI   S 
Sbjct: 90  DTYR-IDPNVLLDPADEKLLEEEI-QAPTS-----SKRSQQHAKVVPWMRKTEYI---ST 149

Query: 374 ESAKQSLTEKQAKELREMKGGRNILENL------NNRERQIKEIEASFE-ACKSRPIHAT 433
           E  +  +    + E  E+K G ++ +         +R+ QI  IE +FE A KS   H +
Sbjct: 150 EFNRYGI----SNEKPEVKIGVSVKQQFTEEEIYKDRDSQITAIEKTFEDAQKSISQHYS 209

Query: 434 NKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHE--SQAIMKS 493
              + PVEV+P+ PDF  + +P   V FDS P          D S   A E  SQA+++ 
Sbjct: 210 KPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPK-------DTSGAAALEMMSQAMIRG 269

Query: 494 YMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYS--------WVREYHWDVRGD- 553
            M       +  +F+AY +P  + L K   D++E++ Y+          REY+W+V+   
Sbjct: 270 MM-----DEEGNQFVAYFLPVEETLKKRKRDQEEEMDYAPDDVYDYKIAREYNWNVKNKA 329

Query: 554 NVDDPTTYLVSFDDAEARYV-PLPTKLVLRKKRAKEGRSSDE-----VEHFPAPARVTVR 613
           +      Y   F + +  Y   L T++ L K+RAK G  S       V+H     +    
Sbjct: 330 SKGYEENYFFIFREGDGVYYNELETRVRLSKRRAKAGVQSGTNALLVVKHRDMNEKELEA 389

Query: 614 RRPTVATLEVKDPGIYSNSKRGSDIEDGIGRSHKHDRHQDMDQFSGAEDEMS 642
           +    A LE  +P      +  ++ ++  G   + ++    ++  G+EDE S
Sbjct: 390 QEARKAQLENHEPEEEEEEEMETEEKEAGGSDEEQEKGSSSEK-EGSEDEHS 414

[Close]

BLAST of CsaV3_7G035280 vs. ExPASy TrEMBL
Match: A0A0A0KCT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452360 PE=3 SV=1)

HSP 1 Score: 1189.5 bits (3076), Expect = 0.0e+00
Identity = 624/706 (88.39%), Postives = 630/706 (89.24%), Query Frame = 0


Query: 1   MASYRPYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPPA 60
           MASYRPYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPPA
Sbjct: 1   MASYRPYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPPA 60

Query: 61  PSSSYPQNYNNQLHQTSNYHHQQYA----------------------------------- 120
           PSSSYPQNYNNQLHQTSNYHHQQY                                    
Sbjct: 61  PSSSYPQNYNNQLHQTSNYHHQQYGPPRTQHPPPPPPPPHQSYPYAPQPPPPPPPDSSYP 120

Query: 121 ------VNAATTSALISTTEFFN-----------------------PPPPPPNSPPPPSA 180
                   +   +    ++++                         PPPPPPNSPPPPSA
Sbjct: 121 PPPPPPATSQPPNLYYPSSQYSQGNQNQQSMQPPPPPSSPPPSSSIPPPPPPNSPPPPSA 180

Query: 181 SQQKAEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMET 240
           SQQKAEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMET
Sbjct: 181 SQQKAEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMET 240

Query: 241 DDEKRLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATP 300
           DDEKRLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATP
Sbjct: 241 DDEKRLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATP 300

Query: 301 FLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKP 360
           FLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKP
Sbjct: 301 FLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKP 360

Query: 361 QLYVEPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTD 420
           QLYVEPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTD
Sbjct: 361 QLYVEPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTD 420

Query: 421 KGVAWLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFE 480
           KGVAWLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFE
Sbjct: 421 KGVAWLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFE 480

Query: 481 ACKSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAH 540
           ACKSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAH
Sbjct: 481 ACKSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAH 540

Query: 541 ESQAIMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDN 600
           ESQAIMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDN
Sbjct: 541 ESQAIMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDN 600

Query: 601 VDDPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVAT 643
           VDDPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVAT
Sbjct: 601 VDDPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVAT 660

[Close]

BLAST of CsaV3_7G035280 vs. ExPASy TrEMBL
Match: A0A5A7UA23 (Protein PAF1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00330 PE=3 SV=1)

HSP 1 Score: 1159.1 bits (2997), Expect = 0.0e+00
Identity = 609/705 (86.38%), Postives = 620/705 (87.94%), Query Frame = 0


Query: 1   MASYRPYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPPA 60
           MASYRPYPPQSSFGSAPAQNSIPPP +QSAS SSQQRGGATTQYNQNWG YAGDAS PPA
Sbjct: 1   MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASGPPA 60

Query: 61  PSSSYPQNYNNQLHQTSNYHHQQYA----------------------------------- 120
           PSSSYPQNYNNQLHQTSNYHHQQY                                    
Sbjct: 61  PSSSYPQNYNNQLHQTSNYHHQQYGTPRTQHPPPPPPHQSYPYAPQPPPPPPPDSSYPPP 120

Query: 121 ----VNAATTSALISTTEFFN-----------------------PPPPPPNSPPPPSASQ 180
                 +   +    ++++                         PPPPPPNSPPPPSASQ
Sbjct: 121 PPPPAPSQPPNLYYPSSQYSQGNQNQQSMQPPPPPSSPPPSSSIPPPPPPNSPPPPSASQ 180

Query: 181 QKAEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDD 240
           QKAEG NMGAHERDKGV KDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDD
Sbjct: 181 QKAEGKNMGAHERDKGVSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDD 240

Query: 241 EKRLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFL 300
           EK+LRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFL
Sbjct: 241 EKKLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFL 300

Query: 301 SGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQL 360
           SGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQL
Sbjct: 301 SGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQL 360

Query: 361 YVEPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKG 420
           YVEPDLGIPLDLLDLSVYNP SVR+PLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKG
Sbjct: 361 YVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKG 420

Query: 421 VAWLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEAC 480
           VAWLVKTQYISPLSIES KQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEAC
Sbjct: 421 VAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEAC 480

Query: 481 KSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHES 540
           KSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHES
Sbjct: 481 KSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHES 540

Query: 541 QAIMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVD 600
           QAIMKSYMAT SDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVD
Sbjct: 541 QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVD 600

Query: 601 DPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLE 643
           DPTTYLVSFDD+EARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLE
Sbjct: 601 DPTTYLVSFDDSEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLE 660

[Close]

BLAST of CsaV3_7G035280 vs. ExPASy TrEMBL
Match: A0A1S3CHF3 (LOW QUALITY PROTEIN: protein PAF1 homolog OS=Cucumis melo OX=3656 GN=LOC103500777 PE=3 SV=1)

HSP 1 Score: 1156.7 bits (2991), Expect = 0.0e+00
Identity = 608/705 (86.24%), Postives = 619/705 (87.80%), Query Frame = 0


Query: 1   MASYRPYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPPA 60
           MASYRPYPPQSSFGSAPAQNSIPPP +QSAS SSQQRGGATTQYNQNWG YAGDAS PPA
Sbjct: 1   MASYRPYPPQSSFGSAPAQNSIPPPPSQSASASSQQRGGATTQYNQNWGAYAGDASVPPA 60

Query: 61  PSSSYPQNYNNQLHQTSNYHHQQYA----------------------------------- 120
           PSSSYPQNYNNQLHQTSNYHHQQY                                    
Sbjct: 61  PSSSYPQNYNNQLHQTSNYHHQQYGTPRTQHPPPPPPHQSYPYAPQPPPPPPPDSSYPPP 120

Query: 121 ----VNAATTSALISTTEFFN-----------------------PPPPPPNSPPPPSASQ 180
                 +   +    ++++                         PPPPPPNSPPPPSASQ
Sbjct: 121 PPPPAPSQPPNLYYPSSQYSQGNQNQQSMQPPPPPSSPPPSSSIPPPPPPNSPPPPSASQ 180

Query: 181 QKAEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDD 240
           QKAEG NMGAHERDKGV KDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDD
Sbjct: 181 QKAEGKNMGAHERDKGVSKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDD 240

Query: 241 EKRLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFL 300
           EK+LRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFL
Sbjct: 241 EKKLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFL 300

Query: 301 SGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQL 360
           SGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQL
Sbjct: 301 SGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQL 360

Query: 361 YVEPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKG 420
           YVEPDLGIPLDLLDLSVYNP SVR+PLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKG
Sbjct: 361 YVEPDLGIPLDLLDLSVYNPPSVRVPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKG 420

Query: 421 VAWLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEAC 480
           VAWLVKTQYISPLSIES KQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEAC
Sbjct: 421 VAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEAC 480

Query: 481 KSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHES 540
           KSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHES
Sbjct: 481 KSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHES 540

Query: 541 QAIMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVD 600
           QAIMKSYMAT SDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVD
Sbjct: 541 QAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVD 600

Query: 601 DPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLE 643
           DPTTYLVSFDD+EARYVPLPTKLVL KKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLE
Sbjct: 601 DPTTYLVSFDDSEARYVPLPTKLVLXKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLE 660

[Close]

BLAST of CsaV3_7G035280 vs. ExPASy TrEMBL
Match: A0A6J1GN64 (protein PAF1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455942 PE=3 SV=1)

HSP 1 Score: 1090.1 bits (2818), Expect = 0.0e+00
Identity = 576/708 (81.36%), Postives = 605/708 (85.45%), Query Frame = 0


Query: 1   MASYRPYPPQSSFGSAPAQNSIPPPSA-QSASVSSQQRGGATTQYNQNWGTYAGDASA-P 60
           MASYRPYPPQSSFG +P QN IPPP A  +ASV +QQRGG  +QYNQNWG Y GD S  P
Sbjct: 1   MASYRPYPPQSSFGPSPGQNPIPPPPAPPAASVPTQQRGG--SQYNQNWGGYGGDGSVPP 60

Query: 61  PAPSSSYPQNYNNQLHQTSNYHHQQYA--------------------------------- 120
           PA SSSYPQNY NQ+HQ+SNYH Q Y                                  
Sbjct: 61  PASSSSYPQNY-NQVHQSSNYHQQHYGPPRSQQPPPPPPPHQSYPYAPQPPPPPPPDSSY 120

Query: 121 -------VNAATTSALISTTEFFN------------------------PPPPPPNSPPPP 180
                   ++  +      +++                          PPPPPPNSPPPP
Sbjct: 121 PPPPPPPASSQPSQHYFPPSQYPQGNQNQQSIQPPPPPPSSPPPSSSIPPPPPPNSPPPP 180

Query: 181 SASQQKAEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRM 240
           SA QQK EG+++GAHERDKGV KDPSYGRR+RENSNHDKHQ+HSGPPMPPKK+NGPSGR+
Sbjct: 181 SAPQQKTEGSSVGAHERDKGVSKDPSYGRRERENSNHDKHQRHSGPPMPPKKSNGPSGRI 240

Query: 241 ETDDEKRLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKA 300
           ETDDEKR RKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGK HGSIVGSRMGERKA
Sbjct: 241 ETDDEKRQRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKGHGSIVGSRMGERKA 300

Query: 301 TPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTY 360
           TPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTY
Sbjct: 301 TPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTY 360

Query: 361 KPQLYVEPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERP 420
           KPQLYVEPDLGIPLDLLDLSVYNP SVR+PLAPEDEELLRDDVLKTPVKKDGGIKRKERP
Sbjct: 361 KPQLYVEPDLGIPLDLLDLSVYNPPSVRIPLAPEDEELLRDDVLKTPVKKDGGIKRKERP 420

Query: 421 TDKGVAWLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEAS 480
           TDKGVAWLVKTQYISPLSIES KQSLTEKQAKELREMKGGRNILENLNNRER+IKEI+AS
Sbjct: 421 TDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILENLNNRERKIKEIDAS 480

Query: 481 FEACKSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRD 540
           FEACKSRP+HATNKNLYPVEVLPLLPDFDRYDDPFVVVAFD+APTADSETFNKLDQSIRD
Sbjct: 481 FEACKSRPVHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDNAPTADSETFNKLDQSIRD 540

Query: 541 AHESQAIMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRG 600
           AHESQAIMKSYMAT SDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRG
Sbjct: 541 AHESQAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRG 600

Query: 601 DNVDDPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTV 643
           DNVDDPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRS+DEVEHFPAPARVTVRRRPTV
Sbjct: 601 DNVDDPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSNDEVEHFPAPARVTVRRRPTV 660

[Close]

BLAST of CsaV3_7G035280 vs. ExPASy TrEMBL
Match: A0A6J1JP14 (protein PAF1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488581 PE=3 SV=1)

HSP 1 Score: 1087.4 bits (2811), Expect = 0.0e+00
Identity = 575/708 (81.21%), Postives = 604/708 (85.31%), Query Frame = 0


Query: 1   MASYRPYPPQSSFGSAPAQNSIPPPSA-QSASVSSQQRGGATTQYNQNWGTYAGDASA-P 60
           MASYRPYPPQSSFG +P QN IPPP A  +ASV +QQRG  ++QYNQNWG Y GD S  P
Sbjct: 1   MASYRPYPPQSSFGPSPGQNPIPPPPAPPAASVPTQQRG--SSQYNQNWGGYGGDGSVPP 60

Query: 61  PAPSSSYPQNYNNQLHQTSNYHHQQYA--------------------------------- 120
           PA SSSYPQNY NQ+HQ+SNYH Q Y                                  
Sbjct: 61  PASSSSYPQNY-NQVHQSSNYHQQHYGPPRSQQPPPPPPPHQSYPYAPQPPPPPPPDSSY 120

Query: 121 -------VNAATTSALISTTEFFN------------------------PPPPPPNSPPPP 180
                   ++  +      +++                          PPPPPPNSPPPP
Sbjct: 121 PPPPPPPASSQPSQHYFPPSQYPQGNQNQQSIQPPPPPPSSPPPSSSIPPPPPPNSPPPP 180

Query: 181 SASQQKAEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRM 240
           SA Q K EG+++GAHERDKGV KDPSYGRR+RENSNHDKHQ+HSGPPMPPKK+NGPSGR+
Sbjct: 181 SAPQPKTEGSSVGAHERDKGVTKDPSYGRRERENSNHDKHQRHSGPPMPPKKSNGPSGRI 240

Query: 241 ETDDEKRLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKA 300
           ETDDEKR RKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGK HGSIVGSRMGERKA
Sbjct: 241 ETDDEKRQRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKGHGSIVGSRMGERKA 300

Query: 301 TPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTY 360
           TPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTY
Sbjct: 301 TPFLSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTY 360

Query: 361 KPQLYVEPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERP 420
           KPQLYVEPDLGIPLDLLDLSVYNP SVR+PLAPEDEELLRDDVLKTPVKKDGGIKRKERP
Sbjct: 361 KPQLYVEPDLGIPLDLLDLSVYNPPSVRIPLAPEDEELLRDDVLKTPVKKDGGIKRKERP 420

Query: 421 TDKGVAWLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEAS 480
           TDKGVAWLVKTQYISPLSIES KQSLTEKQAKELREMKGGRNILENLNNRER+IKEI+AS
Sbjct: 421 TDKGVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILENLNNRERKIKEIDAS 480

Query: 481 FEACKSRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRD 540
           FEACKSRP+HATNKNLYPVEVLPLLPDFDRYDDPFVVVAFD+APTADSETFNKLDQSIRD
Sbjct: 481 FEACKSRPVHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDNAPTADSETFNKLDQSIRD 540

Query: 541 AHESQAIMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRG 600
           AHESQAIMKSYMAT SDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRG
Sbjct: 541 AHESQAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRG 600

Query: 601 DNVDDPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTV 643
           DNVDDPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTV
Sbjct: 601 DNVDDPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTV 660

[Close]

BLAST of CsaV3_7G035280 vs. TAIR 10
Match: AT1G79730.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 616.7 bits (1589), Expect = 2.1e-176
Identity = 366/651 (56.22%), Postives = 445/651 (68.36%), Query Frame = 0


Query: 1   MASYR-PYPPQSSFGSAPAQNSIPPPSAQSASVSSQQRGGATTQYNQNWGTYAGDASAPP 60
           MASYR PYPP       P+QNS+ PP    +          + Q       Y+     PP
Sbjct: 1   MASYRPPYPP---LPQPPSQNSLAPPPPPPSLPPPVPPPPPSHQ------PYSYPPPPPP 60

Query: 61  APSSSYPQNYNNQLHQTSNYHHQQYAVNAATTSALISTTEFFNPPPPPPNSPPPPSASQQ 120
            P + Y Q            H+ Q+    A             PPPPPP++PPP      
Sbjct: 61  PPHAYYQQ----------GPHYPQFNQLQAP------------PPPPPPSAPPPLVPDPP 120

Query: 121 KAEGTNMGAHERDKGVPKDPSYGRRDRENSNHDKHQKHSGPPMPPKKANGPSGRMETDDE 180
           + +G N    + +KG  K    GRR+R   +  KH   S  P         S ++ET++E
Sbjct: 121 RHQGPN----DHEKGASK--QVGRRERAKPDPSKHHHRSHLP--------HSKKIETEEE 180

Query: 181 KRLRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKVHGSIVGSRMGERKATPFLS 240
           +RLRKKRE EKQRQDE+HR  +K S  + + K                   E+K TP L+
Sbjct: 181 RRLRKKRELEKQRQDEKHRQQMKNSHKSQMPK---------------GHTEEKKPTPLLT 240

Query: 241 GERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQLY 300
            +R+ENRLKKPTTF+CKLKFRNELPD SAQ KLM+++++KD +T+YTITSLEK +KP+++
Sbjct: 241 TDRVENRLKKPTTFICKLKFRNELPDPSAQLKLMTIKRDKDQFTKYTITSLEKLWKPKIF 300

Query: 301 VEPDLGIPLDLLDLSVYNPSSVRMPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDKGV 360
           VEPDLGIPLDLLDLSVYNP  V+ PLAPEDEELLRDD   TP+KKD GI+RKERPTDKG+
Sbjct: 301 VEPDLGIPLDLLDLSVYNPPKVKAPLAPEDEELLRDDDAVTPIKKD-GIRRKERPTDKGM 360

Query: 361 AWLVKTQYISPLSIESAKQSLTEKQAKELREMKGGRNILENLNNRERQIKEIEASFEACK 420
           +WLVKTQYIS ++ ESA+QSLTEKQAKELREMKGG NIL NLNNRERQIK+IEASFEACK
Sbjct: 361 SWLVKTQYISSINNESARQSLTEKQAKELREMKGGINILHNLNNRERQIKDIEASFEACK 420

Query: 421 SRPIHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDSAPTADSETFNKLDQSIRDAHESQ 480
           SRP+HATNKNL PVEVLPLLP FDRYD+ FVV  FD AP ADSE F KLD SIRDAHES+
Sbjct: 421 SRPVHATNKNLQPVEVLPLLPYFDRYDEQFVVANFDGAPIADSEFFGKLDPSIRDAHESR 480

Query: 481 AIMKSYMATSSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNVDD 540
           AI+KSY+   SD + PEKFLAYMVPS DELSKDI+DE E++SY+WVREY WDV+  N +D
Sbjct: 481 AILKSYVVAGSDTANPEKFLAYMVPSLDELSKDIHDENEEISYTWVREYLWDVQ-PNAND 540

Query: 541 PTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSSDEVEHFPAPARVTVRRRPTVATLEV 600
           P TYLVSFD+  A Y+PLP +L LRKKRA+EGRSSDE+EHFP P+RVTVRRR TV+ +E 
Sbjct: 541 PGTYLVSFDNGTASYLPLPMRLNLRKKRAREGRSSDEIEHFPVPSRVTVRRRSTVSVIEH 589

Query: 601 KDPGIY-------SNSKRGSDIEDGIGRSHKHDRHQDMDQFS-GAEDEMSD 643
           KD G+Y       S+  R  + E G+GRS KH+  QD +Q+S G ED+ S+
Sbjct: 601 KDSGVYSSRVGASSSKMRRLEDEGGLGRSWKHEPEQDANQYSDGNEDDYSE 589

The following BLAST results are available for this feature:

BLAST of CsaV3_7G035280 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646532.1	0.0e+00	100.00	hypothetical protein Csa_015972 [Cucumis sativus]	[more]
XP_004141783.2	0.0e+00	88.39	LOW QUALITY PROTEIN: protein PAF1 homolog [Cucumis sativus]	[more]
KAA0051046.1	0.0e+00	86.38	protein PAF1-like protein [Cucumis melo var. makuwa] >TYK03841.1 protein PAF1-li...	[more]
XP_008462415.1	0.0e+00	86.24	PREDICTED: LOW QUALITY PROTEIN: protein PAF1 homolog [Cucumis melo]	[more]
XP_038898523.1	0.0e+00	84.87	protein PAF1 homolog [Benincasa hispida]	[more]

BLAST of CsaV3_7G035280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HQA1	3.0e-175	56.22	Protein PAF1 homolog OS=Arabidopsis thaliana OX=3702 GN=VIP2 PE=1 SV=1	[more]
Q4U0S5	3.0e-26	30.68	RNA polymerase II-associated factor 1 homolog OS=Danio rerio OX=7955 GN=paf1 PE=...	[more]
Q4V886	5.1e-26	28.16	RNA polymerase II-associated factor 1 homolog OS=Rattus norvegicus OX=10116 GN=P...	[more]
Q5RAX0	4.4e-25	27.91	RNA polymerase II-associated factor 1 homolog OS=Pongo abelii OX=9601 GN=PAF1 PE...	[more]
Q8N7H5	5.7e-25	27.91	RNA polymerase II-associated factor 1 homolog OS=Homo sapiens OX=9606 GN=PAF1 PE...	[more]

BLAST of CsaV3_7G035280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCT6	0.0e+00	88.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452360 PE=3 SV=1	[more]
A0A5A7UA23	0.0e+00	86.38	Protein PAF1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CHF3	0.0e+00	86.24	LOW QUALITY PROTEIN: protein PAF1 homolog OS=Cucumis melo OX=3656 GN=LOC10350077...	[more]
A0A6J1GN64	0.0e+00	81.36	protein PAF1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455942 PE=3 SV=1	[more]
A0A6J1JP14	0.0e+00	81.21	protein PAF1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488581 PE=3 SV=1	[more]

BLAST of CsaV3_7G035280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79730.1	2.1e-176	56.22	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 401..421
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 613..634
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 599..642
None	No IPR available	PANTHER	PTHR23188:SF15	RNA POLYMERASE II ASSOCIATED FACTOR PAF1-RELATED	coord: 229..641
IPR007133	RNA polymerase II associated factor Paf1	PFAM	PF03985	Paf1	coord: 253..576 e-value: 3.8E-54 score: 184.3
IPR007133	RNA polymerase II associated factor Paf1	PANTHER	PTHR23188	RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG	coord: 229..641

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G035280.1	CsaV3_7G035280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016570	histone modification
biological_process	GO:0006368	transcription elongation from RNA polymerase II promoter
cellular_component	GO:0016593	Cdc73/Paf1 complex