CsaV3_7G034760 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAATAAAAAAAAAAAAATAGAGAGAGAAAAAGAGTAATAAAGAAAAGTTGGAAAGAATCAGTTAGAAGAAATCCCCCATTTTGCAGAATTATCGTTGGTGATTGTAACTAAAAATAGTTAGAATGGTTTAGCATTTCACATCCATCCATTCCCTCAAGAACTAAAAATTAAAGAGAAAAAACTGGAAAAAACAAAGAACACATAGAAACCAAATCCCTCAAAATTTAAAATTATTCCCCCAAAAAATAAGCAAAAGCAAAGAACAAAATCCGCTTTCTCCCATCCCCGCGGGAGCCGCACCCGCTCTCTCAATACCTTCCATCCTCAACAACAACAAACACTACTCCTTAACCCCTCAAATGAGCCCCATCACTCACCACCACCACCACCTTTCCAAATCCTCCACCGCCCCCGTCACAACCACCACTTCTTCCTCCACTACCCAAGCCTGCGCCGCTTGTAAATACCAACGCCGTAAGTGCGCTCCCGATTGCATTCTTGCTCCTTATTTCCCTCACGATCGTCAACGTCAATTCTTAAACGCTCATAAACTCTTCGGTGTTAGCAATATTACTAAAATTATCAAGAATCTTGATCCCTTTGAGAAGGAAGAAGCAATGCGTACCATTATTTTTCAATCTGATGTCCGATCCGTTGATCCTGTTGGCGGTTGTTATCGGATTATTCGAGATCTTCAACGTCAAATTGAATATAATAAGGCCGAGCTTGAGATTGTGCTTCATCAATTGGCGATTTGTAAGCAACAGGCCGCTGCTGCCGCGGCTGCTGCTGCTGCCGCCGCGATTCTTGAAGGGGATCCGATGACTGGATATGGCGGGATTGAGCATCAGTTTGTGGAAGGATATGAAGGCGAAGGGTTTGTGGTTGGGGAAAATGAGAATGGAGAGAGTTTGGAAGATCAGGAAGTGGAGGTTTGGGGAATTCAAGATTCCTGTTCTTCATTGCAATTGAAACAAGCTGGCTCTGTTCATGATTTTCATGACATCAAAATCCACGATAATAATCATCATCAACATCATCATCAACAACAACTTCTTAAATTTCAAATCGATCATCATCAAGATTTGGTTCATCAAAGGTCAGTTTCATTTCTTGCATGGCACTAATTTTACAAATTTTTTTTATCCCTAAATATTTTTATTTTTCTCTTTATTTCAAATTGTTTGTGTGATAAAAATTTGATTATTAAATTAAATTGCAATTTCTAAATAAATTTTCTCCATCTATATTTATTATTATTATTTTTATTTATTAATTCTCCAAGCATTTTGAATTTTTATGATTGGTTAATTTGGCGCCAAATGACGTAATACCGAACTCTTAACTTACAAGCTTGGCCCATAATCCAATAAAGCCCTTGATTTTCTTTATGGGCCAGGCCATTCATTTGCCTTGATCAAGCCTAATGGGCCAAGGAACCCAGGGACAATTTCTGAGAGGCAACCTATAATTTTTTTCTTTTTTCTTTTTTGCTAAATTGAAAAAACTATCCCAAAACTTTGCTGTTTGTTGAAAAAGTGTCCCTATTGTTTTAAAAAGATGTAATCTTTTAGGCTTTCATAAATGTTTCAAAACTAATTGAGACGAGTAGTGTGACATGTCCTAAGTTCTAATTCTAATTTTTCGGGCTGAAATGAATTGATGACAAAATTGGAGTGAAGGTAAAATCTAAAGTGTTTTGACTCATTTGAACTGTGTGCAGTGAAGAACCAATGCTGAAGATGGACAATATGATATTGAAAGAAGATTCTGACCCAATACAACAGGTTCAAGATCAAGAACTTAAAGGTGCAGTAGACACTTTATTTACCTTCCCATCTTGTGATACTTAGCTTCAGCACAGCCCTTTCTCCTTCATCACTTTAGTTTTCTTTGATTAATTAGTCCATAAATGCCTTTGGAGAAGAAAAGGTGTGAGTCATTTATAAAAGAGAATGAGGTAAGGTATGAATAATTTGCGCCCTTCTCCAACGTTCACTCCATGTACTTAGGTATATCATATCTATATACCAATTCATTAACTTTTCATACTTCACAGGAATTAAACATTTGTTTATTCACCTTGTCTTGTGAATACATAAAGCGTTTTGAACATAGAATTGCTTTGAATATGGAACAAACTAAATGACCGTAAATGGCCATTACGGCTGATCCAATCTCCTTTTCATAACTGCTTCTTGTCTTTTCAAAAAAAAGTGAAGGAAACTCACTTGAATTTTTCACAACCCAAAGAATTATGGAGATGAACTTACACAACAGACCCGTTTCTGTTTGCTTCTTTCCTTGAACTTGGAGATTCAAACCATCATACTCCACTTTTGTAATATGCTCTAGAGCTCAAAAAGTGAATATTAAAAGCAATTATGTAAAGATAACAGACTGAATTGGCATAATGGCAAAAACTGATA ATGAGCCCCATCACTCACCACCACCACCACCTTTCCAAATCCTCCACCGCCCCCGTCACAACCACCACTTCTTCCTCCACTACCCAAGCCTGCGCCGCTTGTAAATACCAACGCCGTAAGTGCGCTCCCGATTGCATTCTTGCTCCTTATTTCCCTCACGATCGTCAACGTCAATTCTTAAACGCTCATAAACTCTTCGGTGTTAGCAATATTACTAAAATTATCAAGAATCTTGATCCCTTTGAGAAGGAAGAAGCAATGCGTACCATTATTTTTCAATCTGATGTCCGATCCGTTGATCCTGTTGGCGGTTGTTATCGGATTATTCGAGATCTTCAACGTCAAATTGAATATAATAAGGCCGAGCTTGAGATTGTGCTTCATCAATTGGCGATTTGTAAGCAACAGGCCGCTGCTGCCGCGGCTGCTGCTGCTGCCGCCGCGATTCTTGAAGGGGATCCGATGACTGGATATGGCGGGATTGAGCATCAGTTTGTGGAAGGATATGAAGGCGAAGGGTTTGTGGTTGGGGAAAATGAGAATGGAGAGAGTTTGGAAGATCAGGAAGTGGAGGTTTGGGGAATTCAAGATTCCTGTTCTTCATTGCAATTGAAACAAGCTGGCTCTGTTCATGATTTTCATGACATCAAAATCCACGATAATAATCATCATCAACATCATCATCAACAACAACTTCTTAAATTTCAAATCGATCATCATCAAGATTTGGTTCATCAAAGTGAAGAACCAATGCTGAAGATGGACAATATGATATTGAAAGAAGATTCTGACCCAATACAACAGGTTCAAGATCAAGAACTTAAAGGTGCAGTAGACACTTTATTTACCTTCCCATCTTGTGATACTTAG ATGAGCCCCATCACTCACCACCACCACCACCTTTCCAAATCCTCCACCGCCCCCGTCACAACCACCACTTCTTCCTCCACTACCCAAGCCTGCGCCGCTTGTAAATACCAACGCCGTAAGTGCGCTCCCGATTGCATTCTTGCTCCTTATTTCCCTCACGATCGTCAACGTCAATTCTTAAACGCTCATAAACTCTTCGGTGTTAGCAATATTACTAAAATTATCAAGAATCTTGATCCCTTTGAGAAGGAAGAAGCAATGCGTACCATTATTTTTCAATCTGATGTCCGATCCGTTGATCCTGTTGGCGGTTGTTATCGGATTATTCGAGATCTTCAACGTCAAATTGAATATAATAAGGCCGAGCTTGAGATTGTGCTTCATCAATTGGCGATTTGTAAGCAACAGGCCGCTGCTGCCGCGGCTGCTGCTGCTGCCGCCGCGATTCTTGAAGGGGATCCGATGACTGGATATGGCGGGATTGAGCATCAGTTTGTGGAAGGATATGAAGGCGAAGGGTTTGTGGTTGGGGAAAATGAGAATGGAGAGAGTTTGGAAGATCAGGAAGTGGAGGTTTGGGGAATTCAAGATTCCTGTTCTTCATTGCAATTGAAACAAGCTGGCTCTGTTCATGATTTTCATGACATCAAAATCCACGATAATAATCATCATCAACATCATCATCAACAACAACTTCTTAAATTTCAAATCGATCATCATCAAGATTTGGTTCATCAAAGTGAAGAACCAATGCTGAAGATGGACAATATGATATTGAAAGAAGATTCTGACCCAATACAACAGGTTCAAGATCAAGAACTTAAAGGTGCAGTAGACACTTTATTTACCTTCCCATCTTGTGATACTTAG MSPITHHHHHLSKSSTAPVTTTTSSSTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKNLDPFEKEEAMRTIIFQSDVRSVDPVGGCYRIIRDLQRQIEYNKAELEIVLHQLAICKQQAAAAAAAAAAAAILEGDPMTGYGGIEHQFVEGYEGEGFVVGENENGESLEDQEVEVWGIQDSCSSLQLKQAGSVHDFHDIKIHDNNHHQHHHQQQLLKFQIDHHQDLVHQSEEPMLKMDNMILKEDSDPIQQVQDQELKGAVDTLFTFPSCDT* Homology
BLAST of CsaV3_7G034760 vs. NCBI nr
Match: XP_011659803.2 (LOB domain-containing protein 22 [Cucumis sativus] >KGN45524.1 hypothetical protein Csa_015647 [Cucumis sativus]) HSP 1 Score: 570.9 bits (1470), Expect = 6.5e-159 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. NCBI nr
Match: XP_038899918.1 (LOB domain-containing protein 22 [Benincasa hispida]) HSP 1 Score: 513.5 bits (1321), Expect = 1.2e-141 Identity = 265/291 (91.07%), Postives = 276/291 (94.85%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. NCBI nr
Match: XP_022991793.1 (LOB domain-containing protein 29-like [Cucurbita maxima]) HSP 1 Score: 448.0 bits (1151), Expect = 6.3e-122 Identity = 241/297 (81.14%), Postives = 257/297 (86.53%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. NCBI nr
Match: XP_022953930.1 (LOB domain-containing protein 29-like [Cucurbita moschata]) HSP 1 Score: 443.0 bits (1138), Expect = 2.0e-120 Identity = 242/306 (79.08%), Postives = 257/306 (83.99%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. NCBI nr
Match: KAG7014013.1 (LOB domain-containing protein 22, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 442.6 bits (1137), Expect = 2.7e-120 Identity = 242/307 (78.83%), Postives = 256/307 (83.39%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. ExPASy Swiss-Prot
Match: Q9LRW1 (LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 5.3e-39 Identity = 104/232 (44.83%), Postives = 140/232 (60.34%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. ExPASy Swiss-Prot
Match: Q9SSM9 (LOB domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=LBD7 PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 9.4e-28 Identity = 58/117 (49.57%), Postives = 85/117 (72.65%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.5e-25 Identity = 57/142 (40.14%), Postives = 92/142 (64.79%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.5e-25 Identity = 57/142 (40.14%), Postives = 92/142 (64.79%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. ExPASy Swiss-Prot
Match: Q9STS6 (LOB domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=LBD27 PE=1 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 5.7e-25 Identity = 59/118 (50.00%), Postives = 78/118 (66.10%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. ExPASy TrEMBL
Match: A0A0A0K9M3 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G451300 PE=3 SV=1) HSP 1 Score: 570.9 bits (1470), Expect = 3.1e-159 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. ExPASy TrEMBL
Match: A0A6J1JXA6 (LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC111488330 PE=3 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 3.1e-122 Identity = 241/297 (81.14%), Postives = 257/297 (86.53%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. ExPASy TrEMBL
Match: A0A6J1GR11 (LOB domain-containing protein 29-like OS=Cucurbita moschata OX=3662 GN=LOC111456336 PE=3 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 9.8e-121 Identity = 242/306 (79.08%), Postives = 257/306 (83.99%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. ExPASy TrEMBL
Match: A0A1S4E3M5 (LOB domain-containing protein 22 OS=Cucumis melo OX=3656 GN=LOC103500724 PE=3 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 1.2e-105 Identity = 207/215 (96.28%), Postives = 208/215 (96.74%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. ExPASy TrEMBL
Match: A0A5D3BWM0 (LOB domain-containing protein 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00920 PE=3 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 3.5e-94 Identity = 191/204 (93.63%), Postives = 196/204 (96.08%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. TAIR 10
Match: AT3G13850.1 (LOB domain-containing protein 22 ) HSP 1 Score: 162.9 bits (411), Expect = 3.8e-40 Identity = 104/232 (44.83%), Postives = 140/232 (60.34%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. TAIR 10
Match: AT1G72980.1 (LOB domain-containing protein 7 ) HSP 1 Score: 125.6 bits (314), Expect = 6.7e-29 Identity = 58/117 (49.57%), Postives = 85/117 (72.65%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. TAIR 10
Match: AT3G47870.1 (LOB domain-containing protein 27 ) HSP 1 Score: 116.3 bits (290), Expect = 4.1e-26 Identity = 59/118 (50.00%), Postives = 78/118 (66.10%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 109.8 bits (273), Expect = 3.8e-24 Identity = 52/120 (43.33%), Postives = 79/120 (65.83%), Query Frame = 0
BLAST of CsaV3_7G034760 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 109.8 bits (273), Expect = 3.8e-24 Identity = 52/120 (43.33%), Postives = 79/120 (65.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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