CsaV3_7G034110 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G034110
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 21541940 .. 21542228 (+)
RNA-Seq ExpressionCsaV3_7G034110
SyntenyCsaV3_7G034110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTAAACAAGAACGACAACAGAAAATCGCCTTAGAATTCCAGATTCCCGCAGAAGCCAAACAGTAATCAGATCGCGAAGTGGAAACGATAAAGAAATAATAGAAGAAACTGATGAATCATACCGTCATTAGTGCTGAACTCGAAAACGGAGAGCTCCATTACTCGAAGTCATCGTTTTCAGCAGCTTCAGGATCGAACACAGCATCATTCCGATCAAGTCGCTGTTCAACGTCTTCTTGTTCCTTCTATGAACATTGGCGATGCGAATGATCGCACTCTGATATAG

mRNA sequence

ATGACTAAACAAGAACGACAACAGAAAATCGCCTTAGAATTCCAGATTCCCGCAGAAGCCAAACATCATCGTTTTCAGCAGCTTCAGGATCGAACACAGCATCATTCCGATCAAGTCGCTGTTCAACGTCTTCTTGTTCCTTCTATGAACATTGGCGATGCGAATGATCGCACTCTGATATAG

Coding sequence (CDS)

ATGACTAAACAAGAACGACAACAGAAAATCGCCTTAGAATTCCAGATTCCCGCAGAAGCCAAACATCATCGTTTTCAGCAGCTTCAGGATCGAACACAGCATCATTCCGATCAAGTCGCTGTTCAACGTCTTCTTGTTCCTTCTATGAACATTGGCGATGCGAATGATCGCACTCTGATATAG

Protein sequence

MTKQERQQKIALEFQIPAEAKHHRFQQLQDRTQHHSDQVAVQRLLVPSMNIGDANDRTLI*
Homology
[Close]
BLAST of CsaV3_7G034110 vs. NCBI nr
Match: KGN45455.1 (hypothetical protein Csa_016882 [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 1.8e-23
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MTKQERQQKIALEFQIPAEAKHHRFQQLQDRTQHHSDQVAVQRLLVPSMNIGDANDRTLI 60
          MTKQERQQKIALEFQIPAEAKHHRFQQLQDRTQHHSDQVAVQRLLVPSMNIGDANDRTLI
Sbjct: 1  MTKQERQQKIALEFQIPAEAKHHRFQQLQDRTQHHSDQVAVQRLLVPSMNIGDANDRTLI 60

[Close]
BLAST of CsaV3_7G034110 vs. ExPASy TrEMBL
Match: A0A0A0K6V5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448660 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 8.9e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MTKQERQQKIALEFQIPAEAKHHRFQQLQDRTQHHSDQVAVQRLLVPSMNIGDANDRTLI 60
          MTKQERQQKIALEFQIPAEAKHHRFQQLQDRTQHHSDQVAVQRLLVPSMNIGDANDRTLI
Sbjct: 1  MTKQERQQKIALEFQIPAEAKHHRFQQLQDRTQHHSDQVAVQRLLVPSMNIGDANDRTLI 60

The following BLAST results are available for this feature:
BLAST of CsaV3_7G034110 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45455.11.8e-23100.00hypothetical protein Csa_016882 [Cucumis sativus][more]
BLAST of CsaV3_7G034110 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G034110 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6V58.9e-24100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448660 PE=4 SV=1[more]
BLAST of CsaV3_7G034110 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G034110.1CsaV3_7G034110.1mRNA