CsaV3_7G033290 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G033290
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	LOW QUALITY PROTEIN: ATP-dependent DNA helicase DDX11
Location	chr7: 21000364 .. 21000993 (-)
RNA-Seq Expression	CsaV3_7G033290
Synteny	CsaV3_7G033290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCTAAAGAAAACCATCCACAAAACCAACAACCTCTTCCATAAAACTCTTGAAAACTTCAAGAATTTATTCTTCAAAGGGTTTCAAAAGCTGCAGAAACCCACTTCCTTGATCACCTTATCTTGCAGCAAAGGAAAGCCACAACATACCCATCCAACAGATCGACTCTACATTGATTTTTATGATGAGTGGCAGTCCACACTCCAAAAAGCTGCAAAGAGAAGCATTGACAAAGGCAGTATGATCGCATCCAAGGAAAATGTGAAGCAAGAAGACACCAACGTTGCAATACAAAGCCCTCCAAGGAGCAAACAAGAGAAAGCTGTGAAAGAGAAGAAGAAACCAGGAGCTTCCCATCTTAGAAAAGGTGATGTTAAAAACAATAGTACAAGAAGTAATGGTTTAGTAGAAAAAATGAAAGAATTGGAGATGTTGGATAGGAGTGATATGGAACAAGAATTGGATATAGAAGAAGCAATTCATTATTACTCTCGCCTTAGAAGTCCTGTTTATCTTGAAATTGTGGACAAGTTTTTCATGGACATGCACTCTGAAATTTCTGTTCCTGAGCCTTCAGCTAGGAGTGTGAACAGCTCAAAGAGAAGAATAGGGTCCATGAGATTATAG

mRNA sequence

ATGCTGCTAAAGAAAACCATCCACAAAACCAACAACCTCTTCCATAAAACTCTTGAAAACTTCAAGAATTTATTCTTCAAAGGGTTTCAAAAGCTGCAGAAACCCACTTCCTTGATCACCTTATCTTGCAGCAAAGGAAAGCCACAACATACCCATCCAACAGATCGACTCTACATTGATTTTTATGATGAGTGGCAGTCCACACTCCAAAAAGCTGCAAAGAGAAGCATTGACAAAGGCAGTATGATCGCATCCAAGGAAAATGTGAAGCAAGAAGACACCAACGTTGCAATACAAAGCCCTCCAAGGAGCAAACAAGAGAAAGCTGTGAAAGAGAAGAAGAAACCAGGAGCTTCCCATCTTAGAAAAGGTGATGTTAAAAACAATAGTACAAGAAGTAATGGTTTAGTAGAAAAAATGAAAGAATTGGAGATGTTGGATAGGAGTGATATGGAACAAGAATTGGATATAGAAGAAGCAATTCATTATTACTCTCGCCTTAGAAGTCCTGTTTATCTTGAAATTGTGGACAAGTTTTTCATGGACATGCACTCTGAAATTTCTGTTCCTGAGCCTTCAGCTAGGAGTGTGAACAGCTCAAAGAGAAGAATAGGGTCCATGAGATTATAG

Coding sequence (CDS)

ATGCTGCTAAAGAAAACCATCCACAAAACCAACAACCTCTTCCATAAAACTCTTGAAAACTTCAAGAATTTATTCTTCAAAGGGTTTCAAAAGCTGCAGAAACCCACTTCCTTGATCACCTTATCTTGCAGCAAAGGAAAGCCACAACATACCCATCCAACAGATCGACTCTACATTGATTTTTATGATGAGTGGCAGTCCACACTCCAAAAAGCTGCAAAGAGAAGCATTGACAAAGGCAGTATGATCGCATCCAAGGAAAATGTGAAGCAAGAAGACACCAACGTTGCAATACAAAGCCCTCCAAGGAGCAAACAAGAGAAAGCTGTGAAAGAGAAGAAGAAACCAGGAGCTTCCCATCTTAGAAAAGGTGATGTTAAAAACAATAGTACAAGAAGTAATGGTTTAGTAGAAAAAATGAAAGAATTGGAGATGTTGGATAGGAGTGATATGGAACAAGAATTGGATATAGAAGAAGCAATTCATTATTACTCTCGCCTTAGAAGTCCTGTTTATCTTGAAATTGTGGACAAGTTTTTCATGGACATGCACTCTGAAATTTCTGTTCCTGAGCCTTCAGCTAGGAGTGTGAACAGCTCAAAGAGAAGAATAGGGTCCATGAGATTATAG

Protein sequence

MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYIDFYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASHLRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSVNSSKRRIGSMRL*

Homology

[Close]

BLAST of CsaV3_7G033290 vs. NCBI nr
Match: XP_031744975.1 (uncharacterized protein LOC116405196 [Cucumis sativus] >KGN45372.1 hypothetical protein Csa_016780 [Cucumis sativus])

HSP 1 Score: 404.1 bits (1037), Expect = 7.6e-109
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
           MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID
Sbjct: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120
           FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH
Sbjct: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120

Query: 121 LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
           LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF
Sbjct: 121 LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180

Query: 181 MDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           MDMHSEISVPEPSARSVNSSKRRIGSMRL
Sbjct: 181 MDMHSEISVPEPSARSVNSSKRRIGSMRL 209

[Close]

BLAST of CsaV3_7G033290 vs. NCBI nr
Match: XP_016902859.1 (PREDICTED: uncharacterized protein LOC107991904 [Cucumis melo] >KAA0059298.1 putative ATP-dependent RNA helicase DDX11 [Cucumis melo var. makuwa] >TYK04030.1 putative ATP-dependent RNA helicase DDX11 [Cucumis melo var. makuwa])

HSP 1 Score: 387.9 bits (995), Expect = 5.6e-104
Identity = 200/209 (95.69%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
           MLLK+TIHKTNNLFHKTLE+FK+LFFKGFQKLQKPTSLIT SCSKGKPQHTHPTDRLYID
Sbjct: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120
           FYDEWQSTLQKAAKRSIDKGS+IASKENVKQEDT VAIQSPPRSKQEKAVKEKKKPGASH
Sbjct: 61  FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH 120

Query: 121 LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
           LRKGDVKN+STRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF
Sbjct: 121 LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180

Query: 181 MDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           MDMHSEISVPEPSARS+NSSKRR+GSMRL
Sbjct: 181 MDMHSEISVPEPSARSMNSSKRRMGSMRL 209

[Close]

BLAST of CsaV3_7G033290 vs. NCBI nr
Match: XP_038900276.1 (uncharacterized protein LOC120087356 [Benincasa hispida])

HSP 1 Score: 372.1 bits (954), Expect = 3.2e-99
Identity = 191/210 (90.95%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKP-QHTHPTDRLYI 60
           MLLK+TIHKTNNLFHKTLENFK+ FFKGFQKLQKPTSLIT SCSKGKP QHTHPTDRLYI
Sbjct: 1   MLLKETIHKTNNLFHKTLENFKDFFFKGFQKLQKPTSLITFSCSKGKPQQHTHPTDRLYI 60

Query: 61  DFYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGAS 120
           DFYDEWQSTLQKAAKRS+D G+++ SKENVKQEDTNVA QSPPRS+QEK VKEKKKPGAS
Sbjct: 61  DFYDEWQSTLQKAAKRSVDGGNVMTSKENVKQEDTNVAKQSPPRSRQEKVVKEKKKPGAS 120

Query: 121 HLRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKF 180
           HLRKGDVKN+STRSNGLV+KMKELEMLDR DMEQELDIEEAIHYYSRLRSPVYLEIVDKF
Sbjct: 121 HLRKGDVKNSSTRSNGLVQKMKELEMLDRGDMEQELDIEEAIHYYSRLRSPVYLEIVDKF 180

Query: 181 FMDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           FMDMHSEISVPEPS RSVNSSKRR+GSMRL
Sbjct: 181 FMDMHSEISVPEPSTRSVNSSKRRLGSMRL 210

[Close]

BLAST of CsaV3_7G033290 vs. NCBI nr
Match: XP_023548201.1 (uncharacterized protein LOC111806912 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340.9 bits (873), Expect = 7.9e-90
Identity = 175/209 (83.73%), Postives = 192/209 (91.87%), Query Frame = 0


Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
           MLLK+TI KT+NLFHKTL NFK LF KGFQKLQKPT LIT SCSK KPQHTHPTDRLYID
Sbjct: 1   MLLKETILKTSNLFHKTLGNFKCLFSKGFQKLQKPTCLITFSCSKRKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120
           FYDEWQS LQK+AK++ID GS++ +K+N+KQEDTNVA QSPPRS+QEKAVKEKKKPG+ H
Sbjct: 61  FYDEWQSPLQKSAKKNIDGGSVMTAKQNMKQEDTNVAKQSPPRSRQEKAVKEKKKPGSCH 120

Query: 121 LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
           LRKGDVKN+S RSNGL +KMKELEMLDR DMEQELDIEEAIHYYSRL SPVYLEIVDKFF
Sbjct: 121 LRKGDVKNSSMRSNGLAQKMKELEMLDRCDMEQELDIEEAIHYYSRLSSPVYLEIVDKFF 180

Query: 181 MDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           MD+HSE SVPEPSARS+NSSKRR+GSMRL
Sbjct: 181 MDIHSEFSVPEPSARSMNSSKRRMGSMRL 209

[Close]

BLAST of CsaV3_7G033290 vs. NCBI nr
Match: XP_022954247.1 (uncharacterized protein LOC111456559 [Cucurbita moschata])

HSP 1 Score: 339.7 bits (870), Expect = 1.8e-89
Identity = 178/210 (84.76%), Postives = 191/210 (90.95%), Query Frame = 0


Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
           MLLK+TI KT+NLFHKTL NFK LF KGFQKLQKPT LIT SCSK KPQHTHPTDRLYID
Sbjct: 1   MLLKETILKTSNLFHKTLGNFKCLFSKGFQKLQKPTCLITFSCSKRKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGS-MIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGAS 120
           FYDEWQS LQK+AKRSID GS M+ +K+N+KQEDTNVA QSPPRS+QEKAVKEKKKPG  
Sbjct: 61  FYDEWQSPLQKSAKRSIDGGSVMMTAKQNMKQEDTNVAKQSPPRSRQEKAVKEKKKPGRC 120

Query: 121 HLRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKF 180
           HLRKGDVKN+S RSNGL +KMKELEMLDR DMEQELDIEEAIHYYSRL SPVYLEIVDKF
Sbjct: 121 HLRKGDVKNSSMRSNGLAQKMKELEMLDRGDMEQELDIEEAIHYYSRLSSPVYLEIVDKF 180

Query: 181 FMDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           FMD+HSE SVPEPSARS+NSSKRR+GSMRL
Sbjct: 181 FMDIHSEFSVPEPSARSMNSSKRRMGSMRL 210

[Close]

BLAST of CsaV3_7G033290 vs. ExPASy TrEMBL
Match: A0A0A0KAF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446870 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.7e-109
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
           MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID
Sbjct: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120
           FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH
Sbjct: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120

Query: 121 LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
           LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF
Sbjct: 121 LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180

Query: 181 MDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           MDMHSEISVPEPSARSVNSSKRRIGSMRL
Sbjct: 181 MDMHSEISVPEPSARSVNSSKRRIGSMRL 209

[Close]

BLAST of CsaV3_7G033290 vs. ExPASy TrEMBL
Match: A0A5D3BXY4 (Putative ATP-dependent RNA helicase DDX11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002290 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.7e-104
Identity = 200/209 (95.69%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
           MLLK+TIHKTNNLFHKTLE+FK+LFFKGFQKLQKPTSLIT SCSKGKPQHTHPTDRLYID
Sbjct: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120
           FYDEWQSTLQKAAKRSIDKGS+IASKENVKQEDT VAIQSPPRSKQEKAVKEKKKPGASH
Sbjct: 61  FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH 120

Query: 121 LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
           LRKGDVKN+STRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF
Sbjct: 121 LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180

Query: 181 MDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           MDMHSEISVPEPSARS+NSSKRR+GSMRL
Sbjct: 181 MDMHSEISVPEPSARSMNSSKRRMGSMRL 209

[Close]

BLAST of CsaV3_7G033290 vs. ExPASy TrEMBL
Match: A0A1S4E3Q5 (uncharacterized protein LOC107991904 OS=Cucumis melo OX=3656 GN=LOC107991904 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.7e-104
Identity = 200/209 (95.69%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
           MLLK+TIHKTNNLFHKTLE+FK+LFFKGFQKLQKPTSLIT SCSKGKPQHTHPTDRLYID
Sbjct: 1   MLLKETIHKTNNLFHKTLESFKDLFFKGFQKLQKPTSLITFSCSKGKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120
           FYDEWQSTLQKAAKRSIDKGS+IASKENVKQEDT VAIQSPPRSKQEKAVKEKKKPGASH
Sbjct: 61  FYDEWQSTLQKAAKRSIDKGSVIASKENVKQEDTIVAIQSPPRSKQEKAVKEKKKPGASH 120

Query: 121 LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
           LRKGDVKN+STRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF
Sbjct: 121 LRKGDVKNSSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180

Query: 181 MDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           MDMHSEISVPEPSARS+NSSKRR+GSMRL
Sbjct: 181 MDMHSEISVPEPSARSMNSSKRRMGSMRL 209

[Close]

BLAST of CsaV3_7G033290 vs. ExPASy TrEMBL
Match: A0A6J1GQI6 (uncharacterized protein LOC111456559 OS=Cucurbita moschata OX=3662 GN=LOC111456559 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.5e-90
Identity = 178/210 (84.76%), Postives = 191/210 (90.95%), Query Frame = 0


Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
           MLLK+TI KT+NLFHKTL NFK LF KGFQKLQKPT LIT SCSK KPQHTHPTDRLYID
Sbjct: 1   MLLKETILKTSNLFHKTLGNFKCLFSKGFQKLQKPTCLITFSCSKRKPQHTHPTDRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGS-MIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGAS 120
           FYDEWQS LQK+AKRSID GS M+ +K+N+KQEDTNVA QSPPRS+QEKAVKEKKKPG  
Sbjct: 61  FYDEWQSPLQKSAKRSIDGGSVMMTAKQNMKQEDTNVAKQSPPRSRQEKAVKEKKKPGRC 120

Query: 121 HLRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKF 180
           HLRKGDVKN+S RSNGL +KMKELEMLDR DMEQELDIEEAIHYYSRL SPVYLEIVDKF
Sbjct: 121 HLRKGDVKNSSMRSNGLAQKMKELEMLDRGDMEQELDIEEAIHYYSRLSSPVYLEIVDKF 180

Query: 181 FMDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           FMD+HSE SVPEPSARS+NSSKRR+GSMRL
Sbjct: 181 FMDIHSEFSVPEPSARSMNSSKRRMGSMRL 210

[Close]

BLAST of CsaV3_7G033290 vs. ExPASy TrEMBL
Match: A0A6J1JPP9 (uncharacterized protein LOC111488716 OS=Cucurbita maxima OX=3661 GN=LOC111488716 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 9.4e-89
Identity = 175/209 (83.73%), Postives = 192/209 (91.87%), Query Frame = 0


Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYID 60
           MLLK+TI KT+NLFHKTL NFK LF KGFQKLQKPTSLIT SCSK KPQHTHPT+RLYID
Sbjct: 1   MLLKETILKTSNLFHKTLGNFKCLFSKGFQKLQKPTSLITFSCSKRKPQHTHPTNRLYID 60

Query: 61  FYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASH 120
           FYDEWQS LQK+AK+SID GS++ +K+N+KQEDTNVA QSPPRS+QEKAVKE KKPG+ H
Sbjct: 61  FYDEWQSPLQKSAKKSIDGGSVMTAKQNMKQEDTNVAKQSPPRSRQEKAVKE-KKPGSCH 120

Query: 121 LRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFF 180
           LRKGDVKN+S RSNGL +KMKELEMLDR DMEQELDIEEAIHYYSRL SPVYLEIVDKFF
Sbjct: 121 LRKGDVKNSSMRSNGLAQKMKELEMLDRGDMEQELDIEEAIHYYSRLSSPVYLEIVDKFF 180

Query: 181 MDMHSEISVPEPSARSVNSSKRRIGSMRL 210
           MD+HSE SVPEPSARS+NSSKRR+GSMRL
Sbjct: 181 MDIHSEFSVPEPSARSMNSSKRRMGSMRL 208

[Close]

BLAST of CsaV3_7G033290 vs. TAIR 10
Match: AT3G16070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15260.1); Has 26 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 3.4e-14
Identity = 57/177 (32.20%), Postives = 92/177 (51.98%), Query Frame = 0


Query: 9   KTNNLFHKTLENFKNLFFKGFQKLQKPTSLITLSCSKGKPQHTHPTDRLYIDFYDEWQST 68
           KTN+ FH+TL + K++  +  +KL +P +    SC+  +  ++   D +Y  F + W+S 
Sbjct: 4   KTNSFFHRTLHSLKSIIIRAGKKLPRPKT--HFSCTFCR-SNSLDGDNIYASFLNIWESD 63

Query: 69  LQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGASHLRKGDVKN 128
           L+ + +  +         E+  QE             QE+  + KK    S     D   
Sbjct: 64  LENSIEGPL-------KLEHKVQE-------------QEQYHQVKKTEACSSYSSRD--- 123

Query: 129 NSTRSNGLVEKMKELEMLDRSDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHS 186
                + + +K+ E+ M +  D+EQ LD+EEA+HYYSR+ SPVYL IVDKFF D++S
Sbjct: 124 ----CDTMEKKINEMYMTETVDIEQALDVEEALHYYSRISSPVYLNIVDKFFTDLYS 150

[Close]

BLAST of CsaV3_7G033290 vs. TAIR 10
Match: AT1G15260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16070.1); Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.9 bits (185), Expect = 4.4e-14
Identity = 48/117 (41.03%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 93  DTNVAIQSPPRSKQEKAVKEKKKPGASHLRKGDVKNNSTRSNGLVEKMKELEMLDRSDME 152
           DT VA  +  +S   +  K+ KK           ++   R + L +KMK+L M+D  D++
Sbjct: 69  DTAVADTTHQKSLNNQHKKKPKKVAE------PFEDAKKRGDALAQKMKDLNMVDLRDVD 128

Query: 153 QELDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSVNSSKRRIGSMRL 210
             LD+ EA+  YS +RSPVYL+IVD FF DM+ E S P  SA+ +N S+R+ GS RL
Sbjct: 129 HALDVREALRCYSSIRSPVYLDIVDNFFTDMYYEFSDPRTSAK-INGSRRKAGSFRL 178

[Close]

BLAST of CsaV3_7G033290 vs. TAIR 10
Match: AT3G24535.1 (unknown protein; Has 28 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 4.4e-06
Identity = 52/209 (24.88%), Postives = 89/209 (42.58%), Query Frame = 0


Query: 1   MLLKKTIHKTNNLFHKTLENFKNLFFKG--FQKLQKPTSLITLSCSKGKPQHTHPTDRLY 60
           M+L+ +I  T  LF KT++NFK+ FF    + KL K  +  + + +   P          
Sbjct: 1   MVLRSSISNTRKLFQKTIDNFKSFFFNNGTYHKLPKTPNNTSTNINNDHP---------- 60

Query: 61  IDFYDEWQSTLQKAAKRSIDKGSMIASKENVKQEDTNVAIQSPPRSKQEKAVKEKKKPGA 120
                   S +  ++  SI K      K+ V    TN A    PR               
Sbjct: 61  -------NSNIITSSSSSIHKQFQPKPKDYV---TTNKASSLQPRIGD------------ 120

Query: 121 SHLRKGDVKNNSTRSNGLVEKMKELEMLDRSDMEQE----LDIEEAIHYYSRLRSPVYLE 180
               + +   +  + N +  K+KE+E +   D+  +     D+ E +H YSRLR   YL+
Sbjct: 121 ----RDETLFSQPKVNLVRTKLKEMEKMMNDDIISDEYYVSDVIEFLHCYSRLRYTAYLD 173

Query: 181 IVDKFFMDMHSEISVPEPSARSVNSSKRR 204
           +V+ FFM+++S+   P     +  + +RR
Sbjct: 181 VVENFFMEVYSDFFSPHHLVGTRTAVQRR 173

The following BLAST results are available for this feature:

BLAST of CsaV3_7G033290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031744975.1	7.6e-109	100.00	uncharacterized protein LOC116405196 [Cucumis sativus] >KGN45372.1 hypothetical ...	[more]
XP_016902859.1	5.6e-104	95.69	PREDICTED: uncharacterized protein LOC107991904 [Cucumis melo] >KAA0059298.1 put...	[more]
XP_038900276.1	3.2e-99	90.95	uncharacterized protein LOC120087356 [Benincasa hispida]	[more]
XP_023548201.1	7.9e-90	83.73	uncharacterized protein LOC111806912 [Cucurbita pepo subsp. pepo]	[more]
XP_022954247.1	1.8e-89	84.76	uncharacterized protein LOC111456559 [Cucurbita moschata]	[more]

BLAST of CsaV3_7G033290 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_7G033290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAF5	3.7e-109	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446870 PE=4 SV=1	[more]
A0A5D3BXY4	2.7e-104	95.69	Putative ATP-dependent RNA helicase DDX11 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S4E3Q5	2.7e-104	95.69	uncharacterized protein LOC107991904 OS=Cucumis melo OX=3656 GN=LOC107991904 PE=...	[more]
A0A6J1GQI6	8.5e-90	84.76	uncharacterized protein LOC111456559 OS=Cucurbita moschata OX=3662 GN=LOC1114565...	[more]
A0A6J1JPP9	9.4e-89	83.73	uncharacterized protein LOC111488716 OS=Cucurbita maxima OX=3661 GN=LOC111488716...	[more]

BLAST of CsaV3_7G033290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16070.1	3.4e-14	32.20	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G15260.1	4.4e-14	41.03	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G24535.1	4.4e-06	24.88	unknown protein; Has 28 Blast hits to 27 proteins in 8 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..102
None	No IPR available	PANTHER	PTHR35461	BNAANNG14610D PROTEIN	coord: 1..209
None	No IPR available	PANTHER	PTHR35461:SF1	LOW PROTEIN: ATP-DEPENDENT RNA HELICASE-LIKE PROTEIN	coord: 1..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G033290.1	CsaV3_7G033290.1	mRNA