CsaV3_7G031330 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G031330
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	60S ribosomal protein L6
Location	chr7: 19806972 .. 19809104 (-)
RNA-Seq Expression	CsaV3_7G031330
Synteny	CsaV3_7G031330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGGACCTTTGAGTTAGGCTTCATTTTATTCCAAAAAAAATTCTAATATATAAATAACATTCTTTGTGAATTAGGGTTTCTGGCAACCCTCCTCTTTCTCTCGTTGCGAAGAAGAAGTGTACAGCAGCACCAGAGCAACGTCAATGGCGCCCAAAACCCCGCGAGTTACCAGAAACCCGGATCTCATCCGAGGAGTCGGCAAGTACTCGAGGTCTAAGATGTATCACAAGCGTGGTCTTTGGGCCATCAAGGCTAAAAATGGCGGCGTGTTCCCTCGTCACGACGCACAGCCGAAAGCTGCTGCCCCAGCCGAGAAACCGCCAAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTTAACAAGCGCAAGGCCAAGCTCACGAAGCTTAGGTATGATTGCTCCGTTTTCGTTTTTTTTTTTTTTTTTTTGTGCGTTGAGGTTTATATTATTTTCAAAATTTGTTGAATCTGCTTCTGCGACGTTTTTTTTAACTCAAACCTTTTTTCGGATTTTAGAGCTAGCATTACTCCTGGTACTGTGTTGATTATTCTTGCTGGGAGGTTCAAGGGGAAGAGAGTTGTGTTTTTGAAACAGCTGCCATCTGGGTTGCTTCTGGTTACTGGTGAGTTGGTTCCTTGTGAAATAATGGTGGATGTTTCTTGCTGTTATATTGTATTTATCTGGTTTTGATCCAGGTTATGTTATAATTTGCTGTTATCTGTTGGGTCTCGTTTGTCTCTTTTCACTCGTATGTATTTGTACCTGGTTTTCCTACCAACTCGAATCAGTTCTTCTATTAAAATGTTTGCATTTTGAAAGTTTCAGTGTGGTCTAGTTCGGTTTGCTGTATATTAGAATTGCTAAACTTTTCCTCACTTTGTTGCATGCTTAGTTAAAATCACTACTTTCATTTTCAGTATCACTAAAATTATGATTGTAATAATTCATAATCAATTTTAATAGTATGATAAAATGTGTCTACAAGTGTACTATTGAACATTGAATTGAGTGATTTTGAACACCACAAATGTGACTAACTATTTCAAAATCACTCCTTAATACGTCAGATATGTAGTATGCATCGGCTGAACAATTTATTCCATTGCCCACTTGCAATCAGAAATACATGAATGCTGTTCCTCAACTATTTATTGCAAAGTTGAATCTTTTTATACTAAAGGTTAAGTATTTATGACTATAGGGCCTTTTAAGATTAATGGTGTTCCTCTGAGACGGGTGAATCAATCGTACGTGATTGCAACCTCCACCAAAGTTGACATCTCTGGAGTGAACTCCGAAAAGTTTGACGACAAGTACTTTTCCAAGGAAGCCCAGAAGAAGAAGAAAAAGGGTGAAGGGGAATTTTTCGAGGCAGAGAAAGAGGTAGGAAGAACTGGATTTACAACTCTGTCTTTCATTGTTTTAGTTGTTTATCTTTTTGCTGTTCTAATTTTTGGACTTCAACTTATTACTATAGGAGAAAAGTGCTCTCCCAGCTGAGAAGAAGGATGACCAGAAAGCTGTGGATACACCATTGATAAAGTCTATTGAGGCGGTTCCGGAGTTGAAGGCATACTTGGGAGCAAGATTTTCTCTTAAGGCTGGAATGAAACCTCATGAGCTTGTCTTTTAGATAAGGGATTTGTTTTTTTTCTTCTTCTTATTATCGTTTCTTTTTTACAAAAGTTATCACTTTGTTTTTATGTTCATCTGAACTTGGTATGACTTGTAGTAATTGCCTAGCCCCAAATTTTGATTTTAAATAGAGATTCCATGGCTCATAATTTCTGTTTTCGGGTTCCAAAATTTCATTACAGATTCAGGTCTTCGAATTTATTATGATATTTGACTAGATAGGAAGACATTATTTTGAAAACTATTCTAAATATGATAGTGAATTTAGAATATTGTAAAAATAGTTTACGTGTGGGATTTGACTATAGCTATACTCATATTGGTTAACATTTCGATGCTATCTATTTTAATGGGATGTTGCACTTTATTTTATTTTAATAGTTCATCATTTTTATGTTTAGTAATCAATTCAATGATGTATAGAATTTTATAGGAAAATTTCTCCTTGGGCTCGATGTTTGAAAAATATCATTAAATTTTAAATCTTTCAATG

mRNA sequence

ATGGCGCCCAAAACCCCGCGAGTTACCAGAAACCCGGATCTCATCCGAGGAGTCGGCAAGTACTCGAGGTCTAAGATGTATCACAAGCGTGGTCTTTGGGCCATCAAGGCTAAAAATGGCGGCGTGTTCCCTCGTCACGACGCACAGCCGAAAGCTGCTGCCCCAGCCGAGAAACCGCCAAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTTAACAAGCGCAAGGCCAAGCTCACGAAGCTTAGAGCTAGCATTACTCCTGGTACTGTGTTGATTATTCTTGCTGGGAGGTTCAAGGGGAAGAGAGTTGTGTTTTTGAAACAGCTGCCATCTGGGTTGCTTCTGGTTACTGGGCCTTTTAAGATTAATGGTGTTCCTCTGAGACGGGTGAATCAATCGTACGTGATTGCAACCTCCACCAAAGTTGACATCTCTGGAGTGAACTCCGAAAAGTTTGACGACAAGTACTTTTCCAAGGAAGCCCAGAAGAAGAAGAAAAAGGGTGAAGGGGAATTTTTCGAGGCAGAGAAAGAGGAGAAAAGTGCTCTCCCAGCTGAGAAGAAGGATGACCAGAAAGCTGTGGATACACCATTGATAAAGTCTATTGAGGCGGTTCCGGAGTTGAAGGCATACTTGGGAGCAAGATTTTCTCTTAAGGCTGGAATGAAACCTCATGAGCTTGTCTTTTAG

Coding sequence (CDS)

ATGGCGCCCAAAACCCCGCGAGTTACCAGAAACCCGGATCTCATCCGAGGAGTCGGCAAGTACTCGAGGTCTAAGATGTATCACAAGCGTGGTCTTTGGGCCATCAAGGCTAAAAATGGCGGCGTGTTCCCTCGTCACGACGCACAGCCGAAAGCTGCTGCCCCAGCCGAGAAACCGCCAAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTTAACAAGCGCAAGGCCAAGCTCACGAAGCTTAGAGCTAGCATTACTCCTGGTACTGTGTTGATTATTCTTGCTGGGAGGTTCAAGGGGAAGAGAGTTGTGTTTTTGAAACAGCTGCCATCTGGGTTGCTTCTGGTTACTGGGCCTTTTAAGATTAATGGTGTTCCTCTGAGACGGGTGAATCAATCGTACGTGATTGCAACCTCCACCAAAGTTGACATCTCTGGAGTGAACTCCGAAAAGTTTGACGACAAGTACTTTTCCAAGGAAGCCCAGAAGAAGAAGAAAAAGGGTGAAGGGGAATTTTTCGAGGCAGAGAAAGAGGAGAAAAGTGCTCTCCCAGCTGAGAAGAAGGATGACCAGAAAGCTGTGGATACACCATTGATAAAGTCTATTGAGGCGGTTCCGGAGTTGAAGGCATACTTGGGAGCAAGATTTTCTCTTAAGGCTGGAATGAAACCTCATGAGCTTGTCTTTTAG

Protein sequence

MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF*

Homology

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BLAST of CsaV3_7G031330 vs. NCBI nr
Match: XP_011659463.1 (60S ribosomal protein L6-1 [Cucumis sativus] >KGN45157.1 hypothetical protein Csa_015877 [Cucumis sativus])

HSP 1 Score: 446.4 bits (1147), Expect = 1.5e-121
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

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BLAST of CsaV3_7G031330 vs. NCBI nr
Match: XP_008461261.1 (PREDICTED: 60S ribosomal protein L6-1 [Cucumis melo])

HSP 1 Score: 441.0 bits (1133), Expect = 6.2e-120
Identity = 228/231 (98.70%), Postives = 229/231 (99.13%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKAA PAEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

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BLAST of CsaV3_7G031330 vs. NCBI nr
Match: XP_038896966.1 (60S ribosomal protein L6-1-like [Benincasa hispida])

HSP 1 Score: 433.7 bits (1114), Expect = 9.9e-118
Identity = 223/231 (96.54%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKA AP EKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPTEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRK KLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKE QKKKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           EKS LPA+KKDDQ+AVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF
Sbjct: 181 EKSGLPADKKDDQRAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

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BLAST of CsaV3_7G031330 vs. NCBI nr
Match: XP_022991926.1 (60S ribosomal protein L6-1-like [Cucurbita maxima])

HSP 1 Score: 427.9 bits (1099), Expect = 5.4e-116
Identity = 220/231 (95.24%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKA APAEK P
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSY IATSTKVDISGVN+EKFDDKYFSKE QKKKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPA++KDDQKAVDTPLIKSIE VPELKAYL ARFSLKAGMKPHELVF
Sbjct: 181 EKSALPADRKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKAGMKPHELVF 231

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BLAST of CsaV3_7G031330 vs. NCBI nr
Match: XP_022959727.1 (60S ribosomal protein L6-1-like [Cucurbita moschata] >XP_023513505.1 60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo] >KAG6593324.1 60S ribosomal protein L6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025671.1 60S ribosomal protein L6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 424.1 bits (1089), Expect = 7.8e-115
Identity = 218/231 (94.37%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKA A  EKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKADAAVEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKV+ISGVN+EKFDDKYFSKE QKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVEISGVNTEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPA+KKDDQKAVDTPLIKSIE VPELKAYL ARFSLK+GMKPHEL F
Sbjct: 181 EKSALPADKKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKSGMKPHELAF 231

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BLAST of CsaV3_7G031330 vs. ExPASy Swiss-Prot
Match: Q9FZ76 (60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 2.0e-105
Identity = 196/230 (85.22%), Postives = 208/230 (90.43%), Query Frame = 0


Query: 2   APKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPPK 61
           A +TP+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAQPK  AP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK K TKL+ASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKEE 181
           FKINGVPLRRVNQ+YVI TSTK+DISGVN+EKFDDKYF K A+KKKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           K  +P EKK+DQK VD  LIKSIEAVPELK YLGARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

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BLAST of CsaV3_7G031330 vs. ExPASy Swiss-Prot
Match: Q9C9C5 (60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 3.2e-103
Identity = 194/228 (85.09%), Postives = 205/228 (89.91%), Query Frame = 0


Query: 4   KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPPKFY 63
           +TP+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+ K  AP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AK TKLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDISGV  +KFDDKYF K A+KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IEAVPELK YLGARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

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BLAST of CsaV3_7G031330 vs. ExPASy Swiss-Prot
Match: P34091 (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.5e-102
Identity = 189/228 (82.89%), Postives = 206/228 (90.35%), Query Frame = 0


Query: 4   KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPPKFY 63
           + P V+RNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  +   +   EKPPKFY
Sbjct: 7   RKPHVSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFY 66

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PADDVKKPL+NKRK K TKLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 67  PADDVKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFK 126

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVIATSTKVDISGVN EKFDDKYF K+A+KK KKGEGEFFEAEK+E +
Sbjct: 127 VNGVPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVN 186

Query: 184 ALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
            LP EKKDDQKAVD  L+K+IE VPELKAYLGARFSLKAGMKPHELVF
Sbjct: 187 VLPQEKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234

[Close]

BLAST of CsaV3_7G031330 vs. ExPASy Swiss-Prot
Match: Q9C9C6 (60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.0e-101
Identity = 192/228 (84.21%), Postives = 203/228 (89.04%), Query Frame = 0


Query: 4   KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPPKFY 63
           +T +V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+ K  AP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AK  KLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDISGV  +KFDDKYF K A+KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IEAVPELK YLGARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of CsaV3_7G031330 vs. ExPASy Swiss-Prot
Match: Q2YGT9 (60S ribosomal protein L6 OS=Sus scrofa OX=9823 GN=RPL6 PE=1 SV=3)

HSP 1 Score: 193.7 bits (491), Expect = 2.3e-48
Identity = 115/248 (46.37%), Postives = 156/248 (62.90%), Query Frame = 0


Query: 6   PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKP------ 65
           P  +RNP L+RG+G+YSRS MY ++ L+  K            + +  A   KP      
Sbjct: 38  PHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKSKVEKKKKVRVLATVTKPVGGDKN 97

Query: 66  -----------PKFYPADDVKKPLVNKRKAKLT----KLRASITPGTVLIILAGRFKGKR 125
                      P++YP +DV + L++  K   +    KLRASITPGT+LIIL GR +GKR
Sbjct: 98  GGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSKHVRKLRASITPGTILIILTGRHRGKR 157

Query: 126 VVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVN-SEKFDDKYFSKEA 185
           V+FLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTK+DISGV   E   D YF K+ 
Sbjct: 158 VIFLKQLSSGLLLVTGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDAYFKKKK 217

Query: 186 QKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAG 232
            +K +  EGE F+ EK EK  +  ++K DQKAVD+ +++ I+AVP+L+ YL + F+L  G
Sbjct: 218 LRKPRHQEGEIFDTEK-EKYEISEQRKVDQKAVDSQILRRIKAVPQLQGYLRSVFALTNG 277

[Close]

BLAST of CsaV3_7G031330 vs. ExPASy TrEMBL
Match: A0A0A0K9V0 (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_7G428940 PE=3 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 7.1e-122
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of CsaV3_7G031330 vs. ExPASy TrEMBL
Match: A0A1S3CEA6 (60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103499900 PE=3 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 3.0e-120
Identity = 228/231 (98.70%), Postives = 229/231 (99.13%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKAA PAEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAAVPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of CsaV3_7G031330 vs. ExPASy TrEMBL
Match: A0A6J1JS55 (60S ribosomal protein L6-1-like OS=Cucurbita maxima OX=3661 GN=LOC111488421 PE=3 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.6e-116
Identity = 220/231 (95.24%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKA APAEK P
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSY IATSTKVDISGVN+EKFDDKYFSKE QKKKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPA++KDDQKAVDTPLIKSIE VPELKAYL ARFSLKAGMKPHELVF
Sbjct: 181 EKSALPADRKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CsaV3_7G031330 vs. ExPASy TrEMBL
Match: A0A6J1H5C5 (60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111460710 PE=3 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 3.8e-115
Identity = 218/231 (94.37%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKA A  EKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKADAAVEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKV+ISGVN+EKFDDKYFSKE QKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVEISGVNTEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPA+KKDDQKAVDTPLIKSIE VPELKAYL ARFSLK+GMKPHEL F
Sbjct: 181 EKSALPADKKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKSGMKPHELAF 231

[Close]

BLAST of CsaV3_7G031330 vs. ExPASy TrEMBL
Match: A0A6J1GSP4 (60S ribosomal protein L6-3-like OS=Cucurbita moschata OX=3662 GN=LOC111456610 PE=3 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 8.4e-115
Identity = 218/231 (94.37%), Postives = 224/231 (96.97%), Query Frame = 0


Query: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60
           MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+ KA APAEK P
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSY IATSTKVDISGVN+EKFDDKYFSKE QKKKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPA++KDDQKAVDTPLIKSI+ VPELKAYL ARFSLKAGMKPHELVF
Sbjct: 181 EKSALPADRKDDQKAVDTPLIKSIDGVPELKAYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CsaV3_7G031330 vs. TAIR 10
Match: AT1G18540.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 383.3 bits (983), Expect = 1.4e-106
Identity = 196/230 (85.22%), Postives = 208/230 (90.43%), Query Frame = 0


Query: 2   APKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPPK 61
           A +TP+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAQPK  AP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK K TKL+ASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKEE 181
           FKINGVPLRRVNQ+YVI TSTK+DISGVN+EKFDDKYF K A+KKKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
           K  +P EKK+DQK VD  LIKSIEAVPELK YLGARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of CsaV3_7G031330 vs. TAIR 10
Match: AT1G74050.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 375.9 bits (964), Expect = 2.3e-104
Identity = 194/228 (85.09%), Postives = 205/228 (89.91%), Query Frame = 0


Query: 4   KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPPKFY 63
           +TP+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+ K  AP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AK TKLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDISGV  +KFDDKYF K A+KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IEAVPELK YLGARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of CsaV3_7G031330 vs. TAIR 10
Match: AT1G74060.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 370.9 bits (951), Expect = 7.3e-103
Identity = 192/228 (84.21%), Postives = 203/228 (89.04%), Query Frame = 0


Query: 4   KTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPPKFY 63
           +T +V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+ K  AP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AK  KLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDISGV  +KFDDKYF K A+KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IEAVPELK YLGARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

The following BLAST results are available for this feature:

BLAST of CsaV3_7G031330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659463.1	1.5e-121	100.00	60S ribosomal protein L6-1 [Cucumis sativus] >KGN45157.1 hypothetical protein Cs...	[more]
XP_008461261.1	6.2e-120	98.70	PREDICTED: 60S ribosomal protein L6-1 [Cucumis melo]	[more]
XP_038896966.1	9.9e-118	96.54	60S ribosomal protein L6-1-like [Benincasa hispida]	[more]
XP_022991926.1	5.4e-116	95.24	60S ribosomal protein L6-1-like [Cucurbita maxima]	[more]
XP_022959727.1	7.8e-115	94.37	60S ribosomal protein L6-1-like [Cucurbita moschata] >XP_023513505.1 60S ribosom...	[more]

BLAST of CsaV3_7G031330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ76	2.0e-105	85.22	60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1	[more]
Q9C9C5	3.2e-103	85.09	60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1	[more]
P34091	3.5e-102	82.89	60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 S...	[more]
Q9C9C6	1.0e-101	84.21	60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1	[more]
Q2YGT9	2.3e-48	46.37	60S ribosomal protein L6 OS=Sus scrofa OX=9823 GN=RPL6 PE=1 SV=3	[more]

BLAST of CsaV3_7G031330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9V0	7.1e-122	100.00	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_7G428940 PE=3 SV=1	[more]
A0A1S3CEA6	3.0e-120	98.70	60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103499900 PE=3 SV=1	[more]
A0A6J1JS55	2.6e-116	95.24	60S ribosomal protein L6-1-like OS=Cucurbita maxima OX=3661 GN=LOC111488421 PE=3...	[more]
A0A6J1H5C5	3.8e-115	94.37	60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111460710 PE=3 SV=1	[more]
A0A6J1GSP4	8.4e-115	94.37	60S ribosomal protein L6-3-like OS=Cucurbita moschata OX=3662 GN=LOC111456610 PE...	[more]

BLAST of CsaV3_7G031330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18540.1	1.4e-106	85.22	Ribosomal protein L6 family protein	[more]
AT1G74050.1	2.3e-104	85.09	Ribosomal protein L6 family protein	[more]
AT1G74060.1	7.3e-103	84.21	Ribosomal protein L6 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 85..169 e-value: 1.1E-17 score: 65.7
IPR005568	Ribosomal protein L6, N-terminal	PFAM	PF03868	Ribosomal_L6e_N	coord: 5..59 e-value: 1.9E-15 score: 56.9
IPR000915	60S ribosomal protein L6E	PFAM	PF01159	Ribosomal_L6e	coord: 124..231 e-value: 2.7E-40 score: 137.4
IPR000915	60S ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 1..231
IPR000915	60S ribosomal protein L6E	PROSITE	PS01170	RIBOSOMAL_L6E	coord: 125..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..195
None	No IPR available	PANTHER	PTHR10715:SF9	60S RIBOSOMAL PROTEIN L6	coord: 1..231
IPR041997	Ribosomal Protein L6, KOW domain	CDD	cd13156	KOW_RPL6	coord: 79..231 e-value: 1.18892E-81 score: 238.987
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 85..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G031330.1	CsaV3_7G031330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome