CsaV3_7G030990 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTTGATACTTCTCTTTGTGAAAATAAATGCAATAGGTCTGAGGATTCCACAGACCTACATATAAAGCTTAGGACAGAGAATGGGTAATTAAGTTGAGCCCCATCATGTAATGAGAGGGTGAGAGGGAGACAAAGGACAACAAAATGATAAAAGCAAGGTGTTAGTAAGAGAATGGGTTTGAGTTTATTGCCATGAGTTCCAATTTCCACAAGGATTTAAAGCGTGGGCTGCTTTTTGTTGGTGTTGGAAGAAAAAAGGATGAGCAAATGATCTGCTGCTCATGTTAAAGCAGACAATATTTTGTCTGAACTGAATTAAAAAGAGTAGCTAACAAATTCAAAGGTTGTCTCCTAACTCTTCCTCTTCCTCTCTCTGTGCGTTCTCCCTCTCTCTCTCTCTCTCTCTCTGTCTCTGTGTGTGAAGAATGGAGGGAACAGGGTTATCTTCAACAAGTGAACAGAAATTGGGAAGGTTCAAAAGGGTGTGTGTATTCTGTGGCAGCAAAGCTGGATACAAGTCTACATATGCTGAAGCCACGATTGAGCTTGGTAAAGTACTGGTAATATAGAATATGTCAACCAATTGGTCAAATTGAAATTACCATGTATTCTAAATCTTTTTCCTCTTCTCGTTGTAACATTTTCCCATAAAAATTTGTTAGGTCCTAATTTCTTTTCCTTCCTGTGTTATCAGGTTGAGAAAAAAATAGACTTGGTTTATGGGGGAGGAAGTGTAGGCCTAATGGGTTTGATTTCTAAAACTGTATTTTCTGGAGGAAGTCATGTTCTTGGGTATGCTGCAGCATTTGCTCCAATATTGTGGCTTTGTTAAAATTTTTACATTTCTGTTCAAGTATCATGTTGTTGACTAATTTTATTGTTTCATTCATGATGTATAGAGTGATTCCCAAGGCACTTCTGCCTCATGAGGTACTTATCTGCAAATTTCCTTTCTTGGTCTATGGAAGGTAAGATGGTTTTTGGGTAAAATTAATGAAACCCCACTTGCAGATATCAGGCGAAACTGTCGGTGAAGTGAAAACTGTGGCAGATATGCACCAAAGGAAGTCAGAAATGGCCAAACATGCTGATGCATTTGTAGCACTTCCAGGTTATAATAGGAACTATAAGATTGTGTGTCTGTGTGTGAGTTTATTATGACAAGGGTTTCATTTCATTTACTTCACTAGCAAAAACTTGAAAATTTTGATGAAAAATCCAAAATCCATTGGACTAGGTGGCTATGGAACTATGGAAGAATTACTAGAGATGATAACTTGGGCTCAGCTAGGAATTCATGACAAGCCAGTAAGATATGGATTTGTATTGACAACTTTATGGAGGAAAAAAAGAGTATCTAAAACAAATACCATGGATTTTTCAGTACCTCCCTTCTTTATTTCCTTGGTTTATATTCAACATTTTGAAAGTATCGTTGAAACCCAGTAATAAAAAACAACAAACAGAAATGTTGTCAGAGTGGCTTATTGTTAACTTGACCTTTTATCGGTTTCGAAAAATGTATAATCAGGTAGGATTGCTAAATGTGGATGGATACTATGACAGCTTGCTTGCCTTATTTGACAAAGGAGTGGAGGAAGGCTTCATAGACAATTCAGCTAGGAAAATAGTGGTAATAGCAAACATGGCTGATGAGCTGATAAAAAGAATGGAGGTAGGAGGGGGGGAAAGAAGGTGCTTTGTTAGAGTTGCTGAATTATTGGGGGAAAACATACTTTTGTTTGAAAAAGGTAAGAAAAGAAGGTGATTAGTCATTACATTTTTGGTTCTATTTTGCAGGAGTATGTGGCCGTCCATGACAAGGTTGCACCCAGACAAAGATGGGAAGTGGACCAATTATCAGAGTCTACTCAAAGTGGGCAATCCATGAAATCTTAGATCTCATTCACCATCATGCCATTTGTATAAAAATCGGTTGTTGTGTGCTCAAATTTGATCAATGAGATTGTCAAAAGATAGACCAAATCTCTCTCTTTCTGTTATCTTTCTCTAAAGATCCACAATCTTTATCAATTATTTGTATATCCTTAAAGAAGACCTGTATTAAATTCCATTAAAATCAATGGAATAGTAAGATCTTTCTCTCTCATGAGGCCATTGACTATATTATCAAAAAAAGGCAAGGGGCAACAAGCTCTACAAGCTGAGTGGTGCAAAATAGGTGGGCAAAAGGCAAATAAAGAGAAGAAGACACTTTTGTAGGGTAGTGTTGCAAAAAGAAGAGACCCTCCAACTTGCGCCATTGTGCCAAGGTGCAGCAAAAATTCATTATTGCATTGTGGAATCTGTGATGTGTGGATTGCAGTATTTTGGATTTTGGGTCTTTATTCACTGAGCTTCTGTGAGCTGGGACCCTCCCTAAGAGCGACCCATTTGTTTCCTAGTGGCTTCTCTTCTCCACAAATCCTTTGCATTGGCATACCAAACTTATTGGACAATCTTTTCCTACTCCATCATGTAATCAAAAACACATTATTTTCTAGAATTTATTAGCAAGGTAGGCGGAAAAGTGCAATGAGAGTCTAATTGCCATCCGTCCTTGAAGGAAATTACTGATTCCAACTACCCATGAGGGCCCCCTAAGCCAATAATTCTCCCCGCTTTTAGTATTAAATGTAGGGGGAAAAACTTGGGTGGTGGCTGTGCTGCACCTATATGTGTCCGAACATAGCCAGTTACCTAATGAGAACTTACATGTGGCAATGTCTTTAAAT ATGCTGAAGCCACGATTGAGCTTGGTTGAGAAAAAAATAGACTTGGTTTATGGGGGAGGAAGTGTAGGCCTAATGGGTTTGATTTCTAAAACTGTATTTTCTGGAGGAAGTCATGTTCTTGGAGTGATTCCCAAGGCACTTCTGCCTCATGAGATATCAGGCGAAACTGTCGGTGAAGTGAAAACTGTGGCAGATATGCACCAAAGGAAGTCAGAAATGGCCAAACATGCTGATGCATTTGTAGCACTTCCAGGTGGCTATGGAACTATGGAAGAATTACTAGAGATGATAACTTGGGCTCAGCTAGGAATTCATGACAAGCCAGTAGGATTGCTAAATGTGGATGGATACTATGACAGCTTGCTTGCCTTATTTGACAAAGGAGTGGAGGAAGGCTTCATAGACAATTCAGCTAGGAAAATAGTGGTAATAGCAAACATGGCTGATGAGCTGATAAAAAGAATGGAGGAGTATGTGGCCGTCCATGACAAGGTTGCACCCAGACAAAGATGGGAAGTGGACCAATTATCAGAGTCTACTCAAAGTGGGCAATCCATGAAATCTTAG ATGCTGAAGCCACGATTGAGCTTGGTTGAGAAAAAAATAGACTTGGTTTATGGGGGAGGAAGTGTAGGCCTAATGGGTTTGATTTCTAAAACTGTATTTTCTGGAGGAAGTCATGTTCTTGGAGTGATTCCCAAGGCACTTCTGCCTCATGAGATATCAGGCGAAACTGTCGGTGAAGTGAAAACTGTGGCAGATATGCACCAAAGGAAGTCAGAAATGGCCAAACATGCTGATGCATTTGTAGCACTTCCAGGTGGCTATGGAACTATGGAAGAATTACTAGAGATGATAACTTGGGCTCAGCTAGGAATTCATGACAAGCCAGTAGGATTGCTAAATGTGGATGGATACTATGACAGCTTGCTTGCCTTATTTGACAAAGGAGTGGAGGAAGGCTTCATAGACAATTCAGCTAGGAAAATAGTGGTAATAGCAAACATGGCTGATGAGCTGATAAAAAGAATGGAGGAGTATGTGGCCGTCCATGACAAGGTTGCACCCAGACAAAGATGGGAAGTGGACCAATTATCAGAGTCTACTCAAAGTGGGCAATCCATGAAATCTTAG MLKPRLSLVEKKIDLVYGGGSVGLMGLISKTVFSGGSHVLGVIPKALLPHEISGETVGEVKTVADMHQRKSEMAKHADAFVALPGGYGTMEELLEMITWAQLGIHDKPVGLLNVDGYYDSLLALFDKGVEEGFIDNSARKIVVIANMADELIKRMEEYVAVHDKVAPRQRWEVDQLSESTQSGQSMKS* Homology
BLAST of CsaV3_7G030990 vs. NCBI nr
Match: XP_011659445.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 isoform X2 [Cucumis sativus] >KAE8646399.1 hypothetical protein Csa_015991 [Cucumis sativus]) HSP 1 Score: 370.5 bits (950), Expect = 8.4e-99 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. NCBI nr
Match: XP_004136120.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 isoform X1 [Cucumis sativus]) HSP 1 Score: 357.1 bits (915), Expect = 9.6e-95 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. NCBI nr
Match: XP_038896786.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 354.8 bits (909), Expect = 4.7e-94 Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. NCBI nr
Match: TYK10431.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. NCBI nr
Match: XP_008461304.1 (PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like isoform X1 [Cucumis melo]) HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. ExPASy Swiss-Prot
Match: Q8RUN2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 7.9e-68 Identity = 122/172 (70.93%), Postives = 149/172 (86.63%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 7.4e-66 Identity = 116/174 (66.67%), Postives = 148/174 (85.06%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 3.7e-65 Identity = 115/174 (66.09%), Postives = 147/174 (84.48%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. ExPASy Swiss-Prot
Match: Q7XDB8 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL10 PE=2 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 4.8e-65 Identity = 118/169 (69.82%), Postives = 143/169 (84.62%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. ExPASy Swiss-Prot
Match: Q0JBP5 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL6 PE=2 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 1.1e-64 Identity = 116/170 (68.24%), Postives = 144/170 (84.71%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. ExPASy TrEMBL
Match: A0A0A0K9R7 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_7G427120 PE=3 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 4.6e-95 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. ExPASy TrEMBL
Match: A0A5D3CF87 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00770 PE=3 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 5.1e-94 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. ExPASy TrEMBL
Match: A0A1S3CEE9 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo OX=3656 GN=LOC103499933 PE=3 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 5.1e-94 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. ExPASy TrEMBL
Match: A0A5A7US20 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G00910 PE=3 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 1.1e-93 Identity = 178/181 (98.34%), Postives = 180/181 (99.45%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. ExPASy TrEMBL
Match: A0A6J1DAW2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia OX=3673 GN=LOC111018982 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 8.5e-89 Identity = 168/181 (92.82%), Postives = 177/181 (97.79%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 258.1 bits (658), Expect = 5.6e-69 Identity = 122/172 (70.93%), Postives = 149/172 (86.63%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein ) HSP 1 Score: 251.5 bits (641), Expect = 5.3e-67 Identity = 116/174 (66.67%), Postives = 148/174 (85.06%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 249.2 bits (635), Expect = 2.6e-66 Identity = 115/174 (66.09%), Postives = 147/174 (84.48%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. TAIR 10
Match: AT5G11950.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 245.0 bits (624), Expect = 4.9e-65 Identity = 120/171 (70.18%), Postives = 144/171 (84.21%), Query Frame = 0
BLAST of CsaV3_7G030990 vs. TAIR 10
Match: AT5G11950.2 (Putative lysine decarboxylase family protein ) HSP 1 Score: 245.0 bits (624), Expect = 4.9e-65 Identity = 120/171 (70.18%), Postives = 144/171 (84.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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