CsaV3_7G029760 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G029760
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	GATA transcription factor 15-like
Location	chr7: 18809285 .. 18810434 (-)
RNA-Seq Expression	CsaV3_7G029760
Synteny	CsaV3_7G029760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCAAAGGTGAAGTAATTGGTGATTTTGGTTTGGATTGTTTGATGATTGCCTTCCTCATGAACCGCGCCGCCGATCTCTCTGCTTCCACCTTCAACCCCCCATCTCTAATGACCGCCGTTTCCAAAGAGGGTCTGTTGGAATTGGAGGCAGAGAAACAGAGAGCTTGCGTTCATTGTCGCGCCACCAGAACCCCTCTCTGGAGAGCCGGTCCGGCGGGGCCAAGGGTAATTAAACTTGTTTATAAACAATTAGTCATTAATTAATTGATGAACTTTGTTTCATGGTTTACTTTCTGTACAATTATTATTAGTGTGTATCGTAATATCAAATATATATTTTACAAATATGATAATTTTGACAATGTTCATATTTACTACTGTTATTACCTCTAAAATTGAAACTAATATCAATATCAATTTTGTATCTATAGGGTTTAGTAATATTAATTATAAATTATTTTAAATTGCAATTTTGTCAAACTAATTTCAAAATCTAATATTGGTATCTATACATTATCCATTTATTAAAATTTTTTATTGTGACATTTCAAACGGTTCATTTGAAATGTTTCTGAATTTTATTTAGATCATTTTTATTTAAGATATTTGAAACGGTTCATTTTTAAATGCTTTTAAAGTTTATTTAAATCATCTTTATCTTTAAATAAAAATGATTTATATGAAAAGATTTTATCCTTTGGTCAATTTAAACTTCAATCCAATTTTATTGATGAAATTTTAAATAATAAAAAATTTATAAATATAGTTAAATTGTAATTTTACCACTAGATATGTTGTAAATCTAATTTATTTTGTTATGTTTTTAGAGTACTCCATTAATTTTTTAGCTTATGTTGTTTGACAGTCGTTGTGCAATGCATGTGGAATTCGATACAGGAAGATGAAGATGAATAGCAATAATAATGGGGGAGTGAATAATAATAGTAATAATAAGATGGGAAAAGGGAAGAAAATGGGAGGATCAGGAGGCTCATTGAAAGTAAGAGTAGTGAGATTAGGGAGAGAGATAATGGTGCACAGACCCACGACAGCGATGGAGGATGATAATGAAGTTGCAGAGTCAATCGGAGAAGAAGAACAAACGGCAGCGTTGCTTCTTATGGCTTTATCTTCCGGCTATGTGTGA

mRNA sequence

ATGCTCAAAGGTGAAGTAATTGGTGATTTTGGTTTGGATTGTTTGATGATTGCCTTCCTCATGAACCGCGCCGCCGATCTCTCTGCTTCCACCTTCAACCCCCCATCTCTAATGACCGCCGTTTCCAAAGAGGGTCTGTTGGAATTGGAGGCAGAGAAACAGAGAGCTTGCGTTCATTGTCGCGCCACCAGAACCCCTCTCTGGAGAGCCGGTCCGGCGGGGCCAAGGTCGTTGTGCAATGCATGTGGAATTCGATACAGGAAGATGAAGATGAATAGCAATAATAATGGGGGAGTGAATAATAATAGTAATAATAAGATGGGAAAAGGGAAGAAAATGGGAGGATCAGGAGGCTCATTGAAAGTAAGAGTAGTGAGATTAGGGAGAGAGATAATGGTGCACAGACCCACGACAGCGATGGAGGATGATAATGAAGTTGCAGAGTCAATCGGAGAAGAAGAACAAACGGCAGCGTTGCTTCTTATGGCTTTATCTTCCGGCTATGTGTGA

Coding sequence (CDS)

ATGCTCAAAGGTGAAGTAATTGGTGATTTTGGTTTGGATTGTTTGATGATTGCCTTCCTCATGAACCGCGCCGCCGATCTCTCTGCTTCCACCTTCAACCCCCCATCTCTAATGACCGCCGTTTCCAAAGAGGGTCTGTTGGAATTGGAGGCAGAGAAACAGAGAGCTTGCGTTCATTGTCGCGCCACCAGAACCCCTCTCTGGAGAGCCGGTCCGGCGGGGCCAAGGTCGTTGTGCAATGCATGTGGAATTCGATACAGGAAGATGAAGATGAATAGCAATAATAATGGGGGAGTGAATAATAATAGTAATAATAAGATGGGAAAAGGGAAGAAAATGGGAGGATCAGGAGGCTCATTGAAAGTAAGAGTAGTGAGATTAGGGAGAGAGATAATGGTGCACAGACCCACGACAGCGATGGAGGATGATAATGAAGTTGCAGAGTCAATCGGAGAAGAAGAACAAACGGCAGCGTTGCTTCTTATGGCTTTATCTTCCGGCTATGTGTGA

Protein sequence

MLKGEVIGDFGLDCLMIAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHCRATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNNGGVNNNSNNKMGKGKKMGGSGGSLKVRVVRLGREIMVHRPTTAMEDDNEVAESIGEEEQTAALLLMALSSGYV*

Homology

[Close]

BLAST of CsaV3_7G029760 vs. NCBI nr
Match: XP_011659382.1 (GATA transcription factor 15 [Cucumis sativus] >KGN44993.1 hypothetical protein Csa_016706 [Cucumis sativus])

HSP 1 Score: 330.1 bits (845), Expect = 1.1e-86
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MLKGEVIGDFGLDCLMIAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHC 60
           MLKGEVIGDFGLDCLMIAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHC
Sbjct: 1   MLKGEVIGDFGLDCLMIAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHC 60

Query: 61  RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNNGGVNNNSNNKMGKGKKMGGSGGSL 120
           RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNNGGVNNNSNNKMGKGKKMGGSGGSL
Sbjct: 61  RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNNGGVNNNSNNKMGKGKKMGGSGGSL 120

Query: 121 KVRVVRLGREIMVHRPTTAMEDDNEVAESIGEEEQTAALLLMALSSGYV 170
           KVRVVRLGREIMVHRPTTAMEDDNEVAESIGEEEQTAALLLMALSSGYV
Sbjct: 121 KVRVVRLGREIMVHRPTTAMEDDNEVAESIGEEEQTAALLLMALSSGYV 169

[Close]

BLAST of CsaV3_7G029760 vs. NCBI nr
Match: KAA0046674.1 (GATA transcription factor 15-like [Cucumis melo var. makuwa] >TYK18209.1 GATA transcription factor 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 259.6 bits (662), Expect = 1.9e-65
Identity = 148/172 (86.05%), Postives = 156/172 (90.70%), Query Frame = 0


Query: 1   MLKGEVIGDFGLDCLMIAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHC 60
           MLKGEVIG    D L++AFLMNRAAD S STFN PSLMTAVS++GL ELEAEKQRACVHC
Sbjct: 1   MLKGEVIG----DSLIMAFLMNRAADHSPSTFN-PSLMTAVSEQGLFELEAEKQRACVHC 60

Query: 61  RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNNGGV--NNNSNNKMGKGKKMGGSGG 120
           RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNN+G V  NNN+NNKMGKGKKMGG GG
Sbjct: 61  RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNDGEVNNNNNNNNKMGKGKKMGG-GG 120

Query: 121 SLKVRVVRLGREIMVH-RPTTAMEDDNEVAESIGEEEQTAALLLMALSSGYV 170
           SLK+RVVRLGREIMVH RPTTAME DN VAESIGEEEQTAA+LLMALSSGYV
Sbjct: 121 SLKLRVVRLGREIMVHRRPTTAME-DNGVAESIGEEEQTAAMLLMALSSGYV 165

[Close]

BLAST of CsaV3_7G029760 vs. NCBI nr
Match: XP_008451515.1 (PREDICTED: GATA transcription factor 15-like [Cucumis melo])

HSP 1 Score: 258.1 bits (658), Expect = 5.4e-65
Identity = 148/176 (84.09%), Postives = 156/176 (88.64%), Query Frame = 0


Query: 1   MLKGEVIGDFGLDCLMIAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHC 60
           MLKGEVIG    D L++AFLMNRAAD S STFN PSLMTAVS++GL ELEAEKQRACVHC
Sbjct: 1   MLKGEVIG----DSLIMAFLMNRAADHSPSTFN-PSLMTAVSEQGLFELEAEKQRACVHC 60

Query: 61  RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNNGGV------NNNSNNKMGKGKKMG 120
           RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNN+G V      NNN+NNKMGKGKKMG
Sbjct: 61  RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNDGEVNNNNNNNNNNNNKMGKGKKMG 120

Query: 121 GSGGSLKVRVVRLGREIMVH-RPTTAMEDDNEVAESIGEEEQTAALLLMALSSGYV 170
           G GGSLK+RVVRLGREIMVH RPTTAME DN VAESIGEEEQTAA+LLMALSSGYV
Sbjct: 121 G-GGSLKLRVVRLGREIMVHRRPTTAME-DNGVAESIGEEEQTAAMLLMALSSGYV 169

[Close]

BLAST of CsaV3_7G029760 vs. NCBI nr
Match: XP_038899958.1 (GATA transcription factor 15-like [Benincasa hispida])

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-41
Identity = 104/153 (67.97%), Postives = 117/153 (76.47%), Query Frame = 0


Query: 17  IAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHCRATRTPLWRAGPAGPR 76
           +AFL+NR AD SASTF  PSLM AVSK+ LL  E +KQRACVHC  TRTPLWRAGPAGPR
Sbjct: 1   MAFLVNRPADFSASTFT-PSLMAAVSKQSLLNREPQKQRACVHCCTTRTPLWRAGPAGPR 60

Query: 77  SLCNACGIRYRKMKMNSNNNGGVNNNSNNKMGKGKKMGGSGGSLKVRVVRLGREIMVHRP 136
           SLCNACGIRYRKMK N++N    NNN+NNK+GKGKK+G  GGSLK+RVV+L R+I     
Sbjct: 61  SLCNACGIRYRKMKNNNDN----NNNNNNKIGKGKKVG--GGSLKMRVVKLARKI----- 120

Query: 137 TTAMEDDNEVAESIGEEEQTAALLLMALSSGYV 170
                    VAE IGEEEQ AA+LLMALSS YV
Sbjct: 121 ---------VAEPIGEEEQAAAMLLMALSSAYV 132

[Close]

BLAST of CsaV3_7G029760 vs. NCBI nr
Match: XP_023004687.1 (GATA transcription factor 15-like [Cucurbita maxima])

HSP 1 Score: 175.6 bits (444), Expect = 3.5e-40
Identity = 102/153 (66.67%), Postives = 113/153 (73.86%), Query Frame = 0


Query: 17  IAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHCRATRTPLWRAGPAGPR 76
           +AF +N   DLS STFNP SLM A+S +GLL  E +KQR C HCR TRTPLWRAGPAGPR
Sbjct: 1   MAFFINNHPDLSGSTFNPSSLM-AISNQGLLCTEPQKQRTCHHCRTTRTPLWRAGPAGPR 60

Query: 77  SLCNACGIRYRKMKMNSNNNGGVNNNSNNKMGKGKKMGGSGGSLKVRVVRLGREIMVHRP 136
           SLCNACGIRYRK+K   NNNGGV     NK G GKK+        VRVV LGREIM+HR 
Sbjct: 61  SLCNACGIRYRKLK---NNNGGV-----NKSGNGKKV--------VRVVGLGREIMLHRT 120

Query: 137 TTAMEDDNEVAESIGEEEQTAALLLMALSSGYV 170
           T AM  +N  AE+IGEEEQ AA+LLMALSSGYV
Sbjct: 121 TAAMA-ENGGAETIGEEEQAAAMLLMALSSGYV 135

[Close]

BLAST of CsaV3_7G029760 vs. ExPASy Swiss-Prot
Match: Q8LG10 (GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-16
Identity = 55/120 (45.83%), Postives = 76/120 (63.33%), Query Frame = 0


Query: 48  ELEAEKQRACVHCRATRTPLWRAGPAGPRSLCNACGIRYRKMK--MNSNNNGGVNNNSNN 107
           E  + ++++C  C  ++TPLWR GPAGP+SLCNACGIR RK +  + SN +      S+N
Sbjct: 34  EAISNEKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKRRTLISNRSEDKKKKSHN 93

Query: 108 KMGKGKKMGGSGGSLKVRVVRLGREIMVHRPTTAMEDDNEVAESIGEEEQTAALLLMALS 166
           +  K       G SLK R++ LGRE+M+ R T     +N+    +GEEEQ AA+LLMALS
Sbjct: 94  RNPK------FGDSLKQRLMELGREVMMQRSTA----ENQRRNKLGEEEQ-AAVLLMALS 142

[Close]

BLAST of CsaV3_7G029760 vs. ExPASy Swiss-Prot
Match: Q9FJ10 (GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.6e-13
Identity = 52/121 (42.98%), Postives = 71/121 (58.68%), Query Frame = 0


Query: 52  EKQRACVHCRATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNNGGVNNNSNNKMGKGK 111
           +K++ C  C  ++TPLWR GP GP+SLCNACGIR RK +      GG  +  N K+ K  
Sbjct: 33  DKKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKR-----RGGTED--NKKLKKSS 92

Query: 112 KMGGS---GGSLKVRVVRLGREIMVHRPTTAMEDDNEVAESIGEEEQTAALLLMALSSGY 170
             GG+   G SLK  ++ LG    + + +T      +  + +GEEEQ AA+LLMALS G 
Sbjct: 93  SGGGNRKFGESLKQSLMDLG----IRKRSTV----EKQRQKLGEEEQ-AAVLLMALSYGS 137

[Close]

BLAST of CsaV3_7G029760 vs. ExPASy Swiss-Prot
Match: Q8LC59 (GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 5.2e-10
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 33 NPPSLMTAVSKEGLLELEAEKQ--RACVHCRATRTPLWRAGPAGPRSLCNACGIRYRKMK 91
          +P  L++  S    + ++ EK   R C  C+ T+TP+WR GP GP+SLCNACGIR+RK +
Sbjct: 2  DPRKLLSCSSSYVSVRMKEEKGTIRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQR 61

[Close]

BLAST of CsaV3_7G029760 vs. ExPASy Swiss-Prot
Match: Q5HZ36 (GATA transcription factor 21 OS=Arabidopsis thaliana OX=3702 GN=GATA21 PE=1 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 9.8e-09
Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 0


Query: 55  RACVHCRATRTPLWRAGPAGPRSLCNACGIRYRKMK 91
           R C  C  T+TPLWR+GP GP+SLCNACGIR RK +
Sbjct: 230 RVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 265

[Close]

BLAST of CsaV3_7G029760 vs. ExPASy Swiss-Prot
Match: Q6DBP8 (GATA transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=GATA11 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.3e-08
Identity = 21/37 (56.76%), Postives = 29/37 (78.38%), Query Frame = 0


Query: 55  RACVHCRATRTPLWRAGPAGPRSLCNACGIRYRKMKM 92
           R C HC  T+TP WR GP+GP++LCNACG+R+R  ++
Sbjct: 220 RKCTHCETTKTPQWREGPSGPKTLCNACGVRFRSGRL 256

[Close]

BLAST of CsaV3_7G029760 vs. ExPASy TrEMBL
Match: A0A0A0K6B1 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G405980 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 5.5e-87
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MLKGEVIGDFGLDCLMIAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHC 60
           MLKGEVIGDFGLDCLMIAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHC
Sbjct: 1   MLKGEVIGDFGLDCLMIAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHC 60

Query: 61  RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNNGGVNNNSNNKMGKGKKMGGSGGSL 120
           RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNNGGVNNNSNNKMGKGKKMGGSGGSL
Sbjct: 61  RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNNGGVNNNSNNKMGKGKKMGGSGGSL 120

Query: 121 KVRVVRLGREIMVHRPTTAMEDDNEVAESIGEEEQTAALLLMALSSGYV 170
           KVRVVRLGREIMVHRPTTAMEDDNEVAESIGEEEQTAALLLMALSSGYV
Sbjct: 121 KVRVVRLGREIMVHRPTTAMEDDNEVAESIGEEEQTAALLLMALSSGYV 169

[Close]

BLAST of CsaV3_7G029760 vs. ExPASy TrEMBL
Match: A0A5A7TUD0 (GATA transcription factor 15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001480 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 9.0e-66
Identity = 148/172 (86.05%), Postives = 156/172 (90.70%), Query Frame = 0


Query: 1   MLKGEVIGDFGLDCLMIAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHC 60
           MLKGEVIG    D L++AFLMNRAAD S STFN PSLMTAVS++GL ELEAEKQRACVHC
Sbjct: 1   MLKGEVIG----DSLIMAFLMNRAADHSPSTFN-PSLMTAVSEQGLFELEAEKQRACVHC 60

Query: 61  RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNNGGV--NNNSNNKMGKGKKMGGSGG 120
           RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNN+G V  NNN+NNKMGKGKKMGG GG
Sbjct: 61  RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNDGEVNNNNNNNNKMGKGKKMGG-GG 120

Query: 121 SLKVRVVRLGREIMVH-RPTTAMEDDNEVAESIGEEEQTAALLLMALSSGYV 170
           SLK+RVVRLGREIMVH RPTTAME DN VAESIGEEEQTAA+LLMALSSGYV
Sbjct: 121 SLKLRVVRLGREIMVHRRPTTAME-DNGVAESIGEEEQTAAMLLMALSSGYV 165

[Close]

BLAST of CsaV3_7G029760 vs. ExPASy TrEMBL
Match: A0A1S3BSR7 (GATA transcription factor 15-like OS=Cucumis melo OX=3656 GN=LOC103492777 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.6e-65
Identity = 148/176 (84.09%), Postives = 156/176 (88.64%), Query Frame = 0


Query: 1   MLKGEVIGDFGLDCLMIAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHC 60
           MLKGEVIG    D L++AFLMNRAAD S STFN PSLMTAVS++GL ELEAEKQRACVHC
Sbjct: 1   MLKGEVIG----DSLIMAFLMNRAADHSPSTFN-PSLMTAVSEQGLFELEAEKQRACVHC 60

Query: 61  RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNNGGV------NNNSNNKMGKGKKMG 120
           RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNN+G V      NNN+NNKMGKGKKMG
Sbjct: 61  RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNDGEVNNNNNNNNNNNNKMGKGKKMG 120

Query: 121 GSGGSLKVRVVRLGREIMVH-RPTTAMEDDNEVAESIGEEEQTAALLLMALSSGYV 170
           G GGSLK+RVVRLGREIMVH RPTTAME DN VAESIGEEEQTAA+LLMALSSGYV
Sbjct: 121 G-GGSLKLRVVRLGREIMVHRRPTTAME-DNGVAESIGEEEQTAAMLLMALSSGYV 169

[Close]

BLAST of CsaV3_7G029760 vs. ExPASy TrEMBL
Match: A0A6J1KR45 (GATA transcription factor 15-like OS=Cucurbita maxima OX=3661 GN=LOC111497907 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.7e-40
Identity = 102/153 (66.67%), Postives = 113/153 (73.86%), Query Frame = 0


Query: 17  IAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHCRATRTPLWRAGPAGPR 76
           +AF +N   DLS STFNP SLM A+S +GLL  E +KQR C HCR TRTPLWRAGPAGPR
Sbjct: 1   MAFFINNHPDLSGSTFNPSSLM-AISNQGLLCTEPQKQRTCHHCRTTRTPLWRAGPAGPR 60

Query: 77  SLCNACGIRYRKMKMNSNNNGGVNNNSNNKMGKGKKMGGSGGSLKVRVVRLGREIMVHRP 136
           SLCNACGIRYRK+K   NNNGGV     NK G GKK+        VRVV LGREIM+HR 
Sbjct: 61  SLCNACGIRYRKLK---NNNGGV-----NKSGNGKKV--------VRVVGLGREIMLHRT 120

Query: 137 TTAMEDDNEVAESIGEEEQTAALLLMALSSGYV 170
           T AM  +N  AE+IGEEEQ AA+LLMALSSGYV
Sbjct: 121 TAAMA-ENGGAETIGEEEQAAAMLLMALSSGYV 135

[Close]

BLAST of CsaV3_7G029760 vs. ExPASy TrEMBL
Match: A0A6J1H9M3 (GATA transcription factor 15-like OS=Cucurbita moschata OX=3662 GN=LOC111460872 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.9e-39
Identity = 100/153 (65.36%), Postives = 114/153 (74.51%), Query Frame = 0


Query: 17  IAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHCRATRTPLWRAGPAGPR 76
           +AF +N   DLS STFNP SLM A+S +GLL +E +KQR C HCR TRTPLWRAGPAGPR
Sbjct: 1   MAFFINNHPDLSGSTFNPSSLM-AISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPR 60

Query: 77  SLCNACGIRYRKMKMNSNNNGGVNNNSNNKMGKGKKMGGSGGSLKVRVVRLGREIMVHRP 136
           SLCNACGIRYRK+K   N+NGGVN + N     GKK+        VRVV LGREIM+HR 
Sbjct: 61  SLCNACGIRYRKLK---NSNGGVNKSVN-----GKKV--------VRVVGLGREIMLHRA 120

Query: 137 TTAMEDDNEVAESIGEEEQTAALLLMALSSGYV 170
           T AM  +N  AE+IGEEEQ AA+LLMALSSGYV
Sbjct: 121 TAAMA-ENGGAETIGEEEQAAAMLLMALSSGYV 135

[Close]

BLAST of CsaV3_7G029760 vs. TAIR 10
Match: AT3G06740.1 (GATA transcription factor 15 )

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-17
Identity = 55/120 (45.83%), Postives = 76/120 (63.33%), Query Frame = 0


Query: 48  ELEAEKQRACVHCRATRTPLWRAGPAGPRSLCNACGIRYRKMK--MNSNNNGGVNNNSNN 107
           E  + ++++C  C  ++TPLWR GPAGP+SLCNACGIR RK +  + SN +      S+N
Sbjct: 34  EAISNEKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKRRTLISNRSEDKKKKSHN 93

Query: 108 KMGKGKKMGGSGGSLKVRVVRLGREIMVHRPTTAMEDDNEVAESIGEEEQTAALLLMALS 166
           +  K       G SLK R++ LGRE+M+ R T     +N+    +GEEEQ AA+LLMALS
Sbjct: 94  RNPK------FGDSLKQRLMELGREVMMQRSTA----ENQRRNKLGEEEQ-AAVLLMALS 142

[Close]

BLAST of CsaV3_7G029760 vs. TAIR 10
Match: AT5G49300.1 (GATA transcription factor 16 )

HSP 1 Score: 75.5 bits (184), Expect = 4.7e-14
Identity = 52/121 (42.98%), Postives = 71/121 (58.68%), Query Frame = 0


Query: 52  EKQRACVHCRATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNNGGVNNNSNNKMGKGK 111
           +K++ C  C  ++TPLWR GP GP+SLCNACGIR RK +      GG  +  N K+ K  
Sbjct: 33  DKKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKR-----RGGTED--NKKLKKSS 92

Query: 112 KMGGS---GGSLKVRVVRLGREIMVHRPTTAMEDDNEVAESIGEEEQTAALLLMALSSGY 170
             GG+   G SLK  ++ LG    + + +T      +  + +GEEEQ AA+LLMALS G 
Sbjct: 93  SGGGNRKFGESLKQSLMDLG----IRKRSTV----EKQRQKLGEEEQ-AAVLLMALSYGS 137

[Close]

BLAST of CsaV3_7G029760 vs. TAIR 10
Match: AT5G26930.1 (GATA transcription factor 23 )

HSP 1 Score: 65.9 bits (159), Expect = 3.7e-11
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 33 NPPSLMTAVSKEGLLELEAEKQ--RACVHCRATRTPLWRAGPAGPRSLCNACGIRYRKMK 91
          +P  L++  S    + ++ EK   R C  C+ T+TP+WR GP GP+SLCNACGIR+RK +
Sbjct: 2  DPRKLLSCSSSYVSVRMKEEKGTIRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQR 61

[Close]

BLAST of CsaV3_7G029760 vs. TAIR 10
Match: AT4G16141.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 64.7 bits (156), Expect = 8.2e-11
Identity = 54/165 (32.73%), Postives = 75/165 (45.45%), Query Frame = 0


Query: 52  EKQRACVHCRATRTPLWRAGPAGPRSLCNACGIRYR--------------KMKMNSNNNG 111
           + ++ CV C  +RTPLWR GPAGP+SLCNACGI+ R              K+K  SNNN 
Sbjct: 34  DTKKTCVDCGTSRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGIRQDDIKIKSKSNNNL 93

Query: 112 GVNN-------------------------------NSNNKMGKGKKMGGSGGSLKVRVVR 168
           G+ +                               N  NK+ +  +   S  + K  V R
Sbjct: 94  GLESRNVKTGKGEPVNVKIAKCEPGIVKIAKGEPGNVKNKIKRDPENSSSSNNNKKNVKR 153

[Close]

BLAST of CsaV3_7G029760 vs. TAIR 10
Match: AT5G56860.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 61.6 bits (148), Expect = 7.0e-10
Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 0


Query: 55  RACVHCRATRTPLWRAGPAGPRSLCNACGIRYRKMK 91
           R C  C  T+TPLWR+GP GP+SLCNACGIR RK +
Sbjct: 230 RVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 265

The following BLAST results are available for this feature:

BLAST of CsaV3_7G029760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659382.1	1.1e-86	100.00	GATA transcription factor 15 [Cucumis sativus] >KGN44993.1 hypothetical protein ...	[more]
KAA0046674.1	1.9e-65	86.05	GATA transcription factor 15-like [Cucumis melo var. makuwa] >TYK18209.1 GATA tr...	[more]
XP_008451515.1	5.4e-65	84.09	PREDICTED: GATA transcription factor 15-like [Cucumis melo]	[more]
XP_038899958.1	1.1e-41	67.97	GATA transcription factor 15-like [Benincasa hispida]	[more]
XP_023004687.1	3.5e-40	66.67	GATA transcription factor 15-like [Cucurbita maxima]	[more]

BLAST of CsaV3_7G029760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LG10	2.2e-16	45.83	GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2	[more]
Q9FJ10	6.6e-13	42.98	GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1	[more]
Q8LC59	5.2e-10	46.67	GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2	[more]
Q5HZ36	9.8e-09	66.67	GATA transcription factor 21 OS=Arabidopsis thaliana OX=3702 GN=GATA21 PE=1 SV=2	[more]
Q6DBP8	1.3e-08	56.76	GATA transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=GATA11 PE=2 SV=1	[more]

BLAST of CsaV3_7G029760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6B1	5.5e-87	100.00	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G405980 P...	[more]
A0A5A7TUD0	9.0e-66	86.05	GATA transcription factor 15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BSR7	2.6e-65	84.09	GATA transcription factor 15-like OS=Cucumis melo OX=3656 GN=LOC103492777 PE=4 S...	[more]
A0A6J1KR45	1.7e-40	66.67	GATA transcription factor 15-like OS=Cucurbita maxima OX=3661 GN=LOC111497907 PE...	[more]
A0A6J1H9M3	1.9e-39	65.36	GATA transcription factor 15-like OS=Cucurbita moschata OX=3662 GN=LOC111460872 ...	[more]

BLAST of CsaV3_7G029760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06740.1	1.5e-17	45.83	GATA transcription factor 15	[more]
AT5G49300.1	4.7e-14	42.98	GATA transcription factor 16	[more]
AT5G26930.1	3.7e-11	46.67	GATA transcription factor 23	[more]
AT4G16141.1	8.2e-11	32.73	GATA type zinc finger transcription factor family protein	[more]
AT5G56860.1	7.0e-10	66.67	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 51..109 e-value: 5.5E-12 score: 55.8
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 57..89 e-value: 9.9E-17 score: 60.3
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 57..82
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 51..87 score: 12.571385
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 56..88 e-value: 9.87919E-15 score: 63.1606
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 52..114 e-value: 5.9E-16 score: 60.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..109
None	No IPR available	PANTHER	PTHR47172	OS01G0976800 PROTEIN	coord: 50..169
None	No IPR available	PANTHER	PTHR47172:SF9	GATA TRANSCRIPTION FACTOR 16	coord: 50..169
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 49..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G029760.1	CsaV3_7G029760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding