CsaV3_7G026930 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTTTCCTCTCTCAACTCTTCTCGTCCTCACTTTTGTATTAAAAGAAGAGAGGCTAATGACAAAAACTAAAAAGAGTAAAAAGGAAGGAAGCAAGAGTAGCAAGTAAGTGAAATTAAGATTGGAGAGCTCAACAACCAAGCACACAATCTATATATATATATATAGGGAAAATTTGATATTGAGCCTCAATTTTGGGTGAGCACCACAAATCTCTCAATCTTCTCAAGTTTCCGGTTTAGTCCATACTCACAGTAAACCCCCCCTACCGTATCCAAAGATATTGATTTCAACGACTAAAACCTTCTTGATTCACACTTTACTGTACAACTACCGCAAAACACCAAAGAAATGAGATTGGGTCTCCAACAATTTTCGACCTCCAATTCAATTCCAATAATCAAGGAACAGTGAATCCCAACTTCCTCTTTTGGGAGAAATCAAAGTGAGTTTCTCGATTCCGCATTCTTTGACATTTTTCATATCACAATCGCCCCCTATTTCTTCTATTCTCGATTCAATTATTCAAACTAGTATCTATTTCCACCCCATATTTGATGAATTCAGAACAATTCGGCTTTTTTTTTTTCTCTCTCCCTGTTAGTGGATGGAATCCCCAGTGTACTTAATGTTGTAGAAGACCCTAGCGGGAAAGATTTTGCCAGAGCAGTTACTGAAGCAGAGGCAATAACGAGTAATAATTCAGATACAGAGCCATTTGTTGGTATGGAGTTTGAATCTGAGGAGTCTGTCAAGGTTTTCTACGATGCTTATGCTTCACGTCTCGGTTTTATTATGCGCGTTGATGCATTTCGTAGATCGATGCGTGATGGTGCGGTTGTTTGGCGGCGACTTGTTTGTAATAAAGAAGGGTTTCGCAAGTTTAAGCCGAAAAGAAGTGAAAATAGGAAGCCTCGAGCTGTAACGAGAGAAGGGTGTAAGGCAATGGTTGTTGTAAAGAAAGAAAAAACTGGAAAATGGGTTGTTACGAAATTTGTCAAGGATCATAATCATCCATTGATTGTTACTCCGGCTAGTGCTCGTCGAAATGTTCTTCTTTCCCACACACGGGTAAGGGTTAATTTGATTCACTTTGTGTCTATTTTTACAGAGAAATATGTGTTTTTCTAGTTTCTTCTTTGCTCTTAAGTTCCACTTTCCGTACCTCTGTTCTGGAATAGTTTTTGTTGTAGCCTTTACCTTTGCCCTTAACAATAGAAACGGTTTGATAGAACTTGGAAGGAAAGGACTTTTAACTTCTAAGGGAGGCACCCATTATATAAATATATGTAATATTGAATACTGTAGAACTTCTATCTTTTCCTCTCTCTGATGAAACTTCAAAGAGTGTTCAGGCTGATGTCAGCCTTTAAAACTTCCATTCCACCCCTGAGTATGCGTCCCTTTTCTTAATACAAAAACCTGAACATTTGAAGCATGAGAACGTGAGGGGAATTAAAAGCATATCAATTAGATGTTTGTGTTAGGTGGAGGAAGAATGTCACTGGTATTCATCAGATGTGCATGTTTGGTATGTGGTGAGGGAACTGTTGGACCTTGGAATTCAGGTGCCAAATAAGTGTTGAGTTTTGTTGGTTCAATTTGGTGGACTAGAAAGCAAAGATATTTAAGGATTGGATGAATATGGGACGAGTTTCTTTGGAATTCATAAAATTTGGATGATGTATCCAATAATAGTGTGAGGTCATATTATTTGTATTTTGAAGTAAGGCTGGGTGTTTGTTTACCAATCACTATTCGACAATCAAATTTTAGAATATTTGTTTTTTAGCTTTCTTTACTCATCATTATTGATGTTAGGCAAATCTACCAGAGCCCTTTACGTACCCTGTTGTTAAAAAACACAACCCCTTTTCTAACTGTGATATACTTAGCTTTCCAAGTTCATTCACTTCGAAAAGAACAAATAGGTGTACTATTTTATTTGTTGAATTTCTCGGGGTTTCTCTTGTTATGACCAGACAGTCCACATAGACTAATTGATCTTTCGTAAATGCATTAGAATCCACCAGAGGCACTGTATAGCCACTCTAGACTAGAAAATGTTCAGTTTTAATGCACCAATCTTATAGTGCTTGTTTATGGCCATACTTCTGGTTTTGAGTGTCTAACTTCTTGATTTCTCAAACAACTTGGAGGTCTTGCAGCTCATTTAGATAGGGTAAAAGCCAAACAAAACTACCTAATGAGTTTCAATCTGAGCAAAGCTACGTAGGGTACCTATTAGGTTATTACTCTCCTTTTGGTTGGAGGTTGGAGATTGAAATTAGGCTATTAGACTCCTATAGGTTGGAGGTTGGAGGTTCAATCTCCAACACATGCCCCATGTGCTGTAATGGGCAAAAAGATGCCCATTTTTGTAGGAACGGTCAAACGAAATGCATTCAATCCAGATGGGTAAGAAAAGCTACATGAAAAAAGGGATAAACTATAAGGACCTTGAACTTTGTTCTTTGTTTAAAATATACCCCTATTTTTTCAGAAGTTGCAATATTACCTTTGACCTCTCGTAAATATTTTAAAACTAAAAGTAAAAACAGTTTTATACTGTCATGAAAATTTGAGTGTCTACATATGTGTTCTTTCATACTGAGTTTAGACAAATGTCCTAATCACACACATTGTTGCAGTTAAAATGTATATGGAGTTAATGCCATGTCAATTTTCTTTCCAACGTTCTAAACTTCAAGGGTAGTTTCATAACCTTTATGAAAAGTCATTGGTAATGCAACTTTTGAAAGAATGGGGATAGTTTTTGAAAAAAGGACGAAGTTTATTTTTATAATTTAGCCTTAGAAAAACATGCCAAGCGTTCCAATTGGGCAGCTTTAGACTTTATAGCATGTTTCTTTCTCTTATGCAAGTCAGAACGACTATATTTATGCTATACACTACCCCCTCCAGCAAAACACATTTCTTAAATATTATGAGCATCTTTGTTTACGTCATTTGTACATATGTTTCATTTTCTGTTGCTATTATTTTCAGGATGAGAAAGATGCAAAAATTCGAGAACTAACTGCCGAACTACAGCAAGAACGAAAGCGATGTGCAGCATATCAAGAACAGCTTGCCATGATTTTAGGAGACATGGAGGAACACTCAAATCATCTGGCAAGAAACATAGATAACATTATTCAAAGTGTGAGAGATATTGAATCAGAAAACAATGCATTTTCAAATAGCTAACAACAGAATCCTAAAGAAAATATATTTTTATATATCTGTTTATAGTTTATAGTTCAGAGTTGAGACTTACGTTACATTTGTTCATTAGTTCATTAGTTCTTTAGTTCATTAGTTCTACCACATTTCCCTCTCATTGGTTTGTGATCTGTATGCTAAGTTTAATAATCTGATATGGAAATATTATAATTTGAATCAGAAAATTACTGTCCAACAGTTTGTACCCTCTCTCTGCCAAAAAAGAGTTGAACTGTAATTCTCCTTTACCTCTAAAATTTAA ATGGATGGAATCCCCAGTGTACTTAATGTTGTAGAAGACCCTAGCGGGAAAGATTTTGCCAGAGCAGTTACTGAAGCAGAGGCAATAACGAGTAATAATTCAGATACAGAGCCATTTGTTGGTATGGAGTTTGAATCTGAGGAGTCTGTCAAGGTTTTCTACGATGCTTATGCTTCACGTCTCGGTTTTATTATGCGCGTTGATGCATTTCGTAGATCGATGCGTGATGGTGCGGTTGTTTGGCGGCGACTTGTTTGTAATAAAGAAGGGTTTCGCAAGTTTAAGCCGAAAAGAAGTGAAAATAGGAAGCCTCGAGCTGTAACGAGAGAAGGGTGTAAGGCAATGGTTGTTGTAAAGAAAGAAAAAACTGGAAAATGGGTTGTTACGAAATTTGTCAAGGATCATAATCATCCATTGATTGTTACTCCGGCTAGTGCTCGTCGAAATGTTCTTCTTTCCCACACACGGGATGAGAAAGATGCAAAAATTCGAGAACTAACTGCCGAACTACAGCAAGAACGAAAGCGATGTGCAGCATATCAAGAACAGCTTGCCATGATTTTAGGAGACATGGAGGAACACTCAAATCATCTGGCAAGAAACATAGATAACATTATTCAAAGTGTGAGAGATATTGAATCAGAAAACAATGCATTTTCAAATAGCTAA ATGGATGGAATCCCCAGTGTACTTAATGTTGTAGAAGACCCTAGCGGGAAAGATTTTGCCAGAGCAGTTACTGAAGCAGAGGCAATAACGAGTAATAATTCAGATACAGAGCCATTTGTTGGTATGGAGTTTGAATCTGAGGAGTCTGTCAAGGTTTTCTACGATGCTTATGCTTCACGTCTCGGTTTTATTATGCGCGTTGATGCATTTCGTAGATCGATGCGTGATGGTGCGGTTGTTTGGCGGCGACTTGTTTGTAATAAAGAAGGGTTTCGCAAGTTTAAGCCGAAAAGAAGTGAAAATAGGAAGCCTCGAGCTGTAACGAGAGAAGGGTGTAAGGCAATGGTTGTTGTAAAGAAAGAAAAAACTGGAAAATGGGTTGTTACGAAATTTGTCAAGGATCATAATCATCCATTGATTGTTACTCCGGCTAGTGCTCGTCGAAATGTTCTTCTTTCCCACACACGGGATGAGAAAGATGCAAAAATTCGAGAACTAACTGCCGAACTACAGCAAGAACGAAAGCGATGTGCAGCATATCAAGAACAGCTTGCCATGATTTTAGGAGACATGGAGGAACACTCAAATCATCTGGCAAGAAACATAGATAACATTATTCAAAGTGTGAGAGATATTGAATCAGAAAACAATGCATTTTCAAATAGCTAA MDGIPSVLNVVEDPSGKDFARAVTEAEAITSNNSDTEPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNKEGFRKFKPKRSENRKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPASARRNVLLSHTRDEKDAKIRELTAELQQERKRCAAYQEQLAMILGDMEEHSNHLARNIDNIIQSVRDIESENNAFSNS* Homology
BLAST of CsaV3_7G026930 vs. NCBI nr
Match: XP_004150340.1 (protein FAR-RED IMPAIRED RESPONSE 1 [Cucumis sativus] >KGN44696.1 hypothetical protein Csa_015589 [Cucumis sativus]) HSP 1 Score: 434.1 bits (1115), Expect = 7.3e-118 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. NCBI nr
Match: XP_008447236.1 (PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 isoform X1 [Cucumis melo]) HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-113 Identity = 215/222 (96.85%), Postives = 219/222 (98.65%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. NCBI nr
Match: XP_023547555.1 (protein FAR1-RELATED SEQUENCE 5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 383.3 bits (983), Expect = 1.5e-102 Identity = 194/225 (86.22%), Postives = 212/225 (94.22%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. NCBI nr
Match: XP_038897039.1 (protein FAR1-RELATED SEQUENCE 5 isoform X1 [Benincasa hispida] >XP_038897041.1 protein FAR1-RELATED SEQUENCE 5 isoform X1 [Benincasa hispida]) HSP 1 Score: 379.4 bits (973), Expect = 2.1e-101 Identity = 192/216 (88.89%), Postives = 206/216 (95.37%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. NCBI nr
Match: KAG7014556.1 (Protein FAR1-RELATED SEQUENCE 5 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 375.9 bits (964), Expect = 2.3e-100 Identity = 190/225 (84.44%), Postives = 210/225 (93.33%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.5e-28 Identity = 60/109 (55.05%), Postives = 81/109 (74.31%), Query Frame = 0
HSP 2 Score: 37.4 bits (85), Expect = 2.6e-01 Identity = 32/108 (29.63%), Postives = 50/108 (46.30%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. ExPASy Swiss-Prot
Match: Q9M8J3 (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.7e-14 Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. ExPASy Swiss-Prot
Match: Q3E7I5 (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana OX=3702 GN=FRS12 PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 4.6e-14 Identity = 43/115 (37.39%), Postives = 64/115 (55.65%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. ExPASy Swiss-Prot
Match: Q9SWG3 (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12 Identity = 42/135 (31.11%), Postives = 69/135 (51.11%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. ExPASy Swiss-Prot
Match: Q3EBQ3 (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.3e-12 Identity = 42/118 (35.59%), Postives = 70/118 (59.32%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. ExPASy TrEMBL
Match: A0A0A0KA59 (FAR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G372900 PE=4 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 3.5e-118 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. ExPASy TrEMBL
Match: A0A1S3BGE3 (protein FAR-RED IMPAIRED RESPONSE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489731 PE=4 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 5.3e-114 Identity = 215/222 (96.85%), Postives = 219/222 (98.65%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. ExPASy TrEMBL
Match: A0A6J1JVH7 (protein FAR1-RELATED SEQUENCE 5 OS=Cucurbita maxima OX=3661 GN=LOC111487929 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100 Identity = 189/225 (84.00%), Postives = 210/225 (93.33%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. ExPASy TrEMBL
Match: A0A6J1GPB7 (protein FAR1-RELATED SEQUENCE 5 OS=Cucurbita moschata OX=3662 GN=LOC111456290 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.4e-98 Identity = 186/225 (82.67%), Postives = 208/225 (92.44%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. ExPASy TrEMBL
Match: A0A1S3BGZ2 (protein FAR1-RELATED SEQUENCE 5 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489731 PE=4 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 3.9e-93 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. TAIR 10
Match: AT3G07500.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 263.1 bits (671), Expect = 2.1e-70 Identity = 126/178 (70.79%), Postives = 153/178 (85.96%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. TAIR 10
Match: AT2G43280.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 183.7 bits (465), Expect = 1.6e-46 Identity = 97/196 (49.49%), Postives = 136/196 (69.39%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. TAIR 10
Match: AT3G59470.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39 Identity = 82/181 (45.30%), Postives = 123/181 (67.96%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. TAIR 10
Match: AT3G59470.2 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39 Identity = 82/181 (45.30%), Postives = 123/181 (67.96%), Query Frame = 0
BLAST of CsaV3_7G026930 vs. TAIR 10
Match: AT4G12850.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 136.0 bits (341), Expect = 3.8e-32 Identity = 70/179 (39.11%), Postives = 115/179 (64.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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