CsaV3_7G023570 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCGATCTTAGCTCGGAAATCCCTTCTCGCTCTTCGTGCTCGTCAGCTTGTAAGGATTCTTCCTTCTTTTGCCCTAATCTTTCTTCTCCGACCTTCACATCCTTTTACCCGCGATGGATTTATACCATCCAATTGCTTCAATATGGACGTTGCTGACCTTTTATTCTGTTTTGGGATTTCTAGCTTTTGTAATTAAATTGAAGTTTTCTAGGCGCTCATTTTTTCTTTTTAGTTTTGATATTCGAGTTGTAGAACACACGGGGTATTAGTTTCCTTTTTGTTTTTACTGAATCATACAATTATGGTCGGTGGGAGTTGCTGTGTGTAATTTATTTGCTCCGTTGGGTTAACATTTTTTATATGGAAATGGGATCGTGTGTCATTTCTTTTCCCTGACATGGAAGGATTTGTTATTTTTAATTGTCCTATTTGGTGGGAGAGTTTAGAACGAGGAACTTGAAATACTGGATACTTGCAGACTGTGAAGTTGATGGTTAGGCTGTTTATACAATGCAGTATAAAGATTTGTAGGCAGATGTTCAAGACTGTGAATTATGTTCTTTCCTTGAATTTGGGCAAAGAACAATTAGCATTATGGTGTTGTGGGTTGGGGCGGGAGGGTTCTGTTCGTATTCAGCCTTTTAGTCTTGTTTTATTTGATCTGAATATTTCACTTTGATATTTGATGAAAAATATTATCCCCCATTCTTTAGTTATCGTGGAGGTATTTACAATATTGATTGTAAACTTGATGGGAATCATGCCACAGATATCATTTTCCTCAATTCTGGTAGTTGTAATTGCTTTTTGTTACCCTTTACTTTATTTATCCGTATAATCTACTGTTGTTAGGCTGTCTCCGGGCAAGCACTGCAAGGTTCTCCTTTTCATGGTCTCCAGTCAACACACTTGTACAGTACCAGCAAAGGTTTTGTTTCTGGTTCTTATCATCTCGATAAATTTACTTGGGTTACCATATTAACATAATTAATCATTGCTGAAGCTGAACTTTGCAGTGTGTACATAGGAGATTTACTTATTTGTTTATTTCTGCCAAAACGTTGCTAGGGATTTTTCTTTTCTTTTTTTAAAATTCTTTTCCATCTCGGTACTTGTGCAGATGATGAAGAAAGAGAGCAGCTTGCCAAGGAGATCTCGAAGGATTGGAGTTCTAGTAATTTTTTTATATTTTTCCATAGTTTCTTCACTGCTTCATCTTTTTCAGTTGTTTGTTCTATTATACTTTATGGTTCTTACAAAAATCAATTTCCTGGCCAATTTTAGTTTTTGAGCGTAGCATAAACACACTATTTCTCACTGAGATGGTCCGGGGTCTGTCACTGACTCTTAAATACTTCTTTGAGAAAAAAGTCACTGTAAGTGCCTTTCAATCAACTTTTTTTGGCACTAAGCTAAAACTCTTGTTGATCCCGATTTCTGATTAATGTAAATGTATCATTCAGATCAATTACCCATTTGAGAAAGGCCCCCTAAGTCCTCGTTTTCGAGGTGAGCATGCCCTCCGACGATATCCAACTGGAGAAGAACGATGCATTGCATGCAAACTTTGTGAAGCTGTAAGAATCTGGACTTATATTTTAAGCTGTCTGTTCAAGTCATTTTGGTTTGGACAAAATAATTCTACAAAAGAATTTTAGAGAGGTCTTTTTATTTCTTGCCATCATTGATTTTAGGTTGAATGACGAGTTTAGTCCTAAACTTTCAGGTTTGTGTTGATTTTCGATTTGGTATTTGAAATTTCTAAAGTTGTCTACTAGGTCCATGAAATTTCAATTTTTGCCAAATTAACCCATGGACTTGAAAAATTGCCTCATAGATTCTTAAGCTTTCTATTATGTCTCTTTTTAAGTTTCAGACCTTTTAAAAATTGTCAAATGGATACTTAAACTTTCAAATTTGTGTCTAATAGATTACTAAAATTTTTCAATTTTGTATCTAATTTGGCTTATTCAACACACATACATATTTTCAAAATTCATGTATCTACTTAACATAAAATTTAAATTGTAGGACTTTATTAGATATAAAATTTTATTATTTTTTAATTGAAGATGTTGGAGACCTATTATATCTTGAATTGAAAGTTTAGAGATTTATTACACCTGAAAGTTTAGGGATCAAACAAGCACACACTTGAAAGGTTTAGACTAAACCGTAATTTAACCTTGATTTTGTAATATCTTTTGTATTATGCATTCTCTCAGTTGAAGGTGAAAATAATAGCTGCTCCTACTGACTCAATACTTTTAGATTGTAGCAATGGAGCATTATAGCTTGGTCAACATTTTACCGTCCCTTAATGCATTAAAGCACATATTGTTCTGTTATGTGTAGTCAAAGTTGAAAAATCTTACTAGGGTAGATGTATCTTAGGTAATTTAGGCATGTCGTTTAATCCTTGACTGAAATATTGTATTTGAGAGGGGTTCTCTTAGAGATGCAACTTTGAGAGCTTTATGTACTCATATTTCTCAGCAGGCCATGCTTGAAATGTTTATGGTTTTTCGATCTCTTAAATAGCCATGGAGGCAAATTTGATACTTTGAAATGTGATGCTTTTGATAGCTGAATCACTACTTCGAGTTGTGGCATTGAACTTGTGCCTGCCACTCTATTGATTTTCTTGTCAGATTTGTCCTGCTCAAGCAATCACAATTGAGGCTGAGGAACGGGAAGATGGTAGCCGTAGGACCACAAGGTGATCACAGCTCCACACCATCTTCATATTGTCACATATGTTTCCCTAAATAATCTTAATTTTCAGGTACGACATTGATATGACCAAATGCATCTACTGTGGGTTCTGTCAAGAGGCATGCCCTGTTGACGCCATTGTTGAAGGACCAAACTTTGAGTTTGCTACAGAGACTCACGAGGTGATCTTATTAATGTTTGAATGTTAAAAGCTGATTCTAAAACTTGCTGAAGATTGTTTGGCTCATAATTTTGTGATGTTGTAGGAGCTTCTCTATGACAAAGAAAAGTTGCTCGAGAACGGAGACCGGTGGGAGACTGAGATTGCAGAGAATCTTAGATCTGAAAGCCTCTATCGCTGA ATGGCTGCGATCTTAGCTCGGAAATCCCTTCTCGCTCTTCGTGCTCGTCAGCTTGCTGTCTCCGGGCAAGCACTGCAAGGTTCTCCTTTTCATGGTCTCCAGTCAACACACTTGTACAGTACCAGCAAAGATGATGAAGAAAGAGAGCAGCTTGCCAAGGAGATCTCGAAGGATTGGAGTTCTATTTTTGAGCGTAGCATAAACACACTATTTCTCACTGAGATGGTCCGGGGTCTGTCACTGACTCTTAAATACTTCTTTGAGAAAAAAGTCACTATCAATTACCCATTTGAGAAAGGCCCCCTAAGTCCTCGTTTTCGAGGTGAGCATGCCCTCCGACGATATCCAACTGGAGAAGAACGATGCATTGCATGCAAACTTTGTGAAGCTATTTGTCCTGCTCAAGCAATCACAATTGAGGCTGAGGAACGGGAAGATGGTAGCCGTAGGACCACAAGGTACGACATTGATATGACCAAATGCATCTACTGTGGGTTCTGTCAAGAGGCATGCCCTGTTGACGCCATTGTTGAAGGACCAAACTTTGAGTTTGCTACAGAGACTCACGAGGAGCTTCTCTATGACAAAGAAAAGTTGCTCGAGAACGGAGACCGGTGGGAGACTGAGATTGCAGAGAATCTTAGATCTGAAAGCCTCTATCGCTGA ATGGCTGCGATCTTAGCTCGGAAATCCCTTCTCGCTCTTCGTGCTCGTCAGCTTGCTGTCTCCGGGCAAGCACTGCAAGGTTCTCCTTTTCATGGTCTCCAGTCAACACACTTGTACAGTACCAGCAAAGATGATGAAGAAAGAGAGCAGCTTGCCAAGGAGATCTCGAAGGATTGGAGTTCTATTTTTGAGCGTAGCATAAACACACTATTTCTCACTGAGATGGTCCGGGGTCTGTCACTGACTCTTAAATACTTCTTTGAGAAAAAAGTCACTATCAATTACCCATTTGAGAAAGGCCCCCTAAGTCCTCGTTTTCGAGGTGAGCATGCCCTCCGACGATATCCAACTGGAGAAGAACGATGCATTGCATGCAAACTTTGTGAAGCTATTTGTCCTGCTCAAGCAATCACAATTGAGGCTGAGGAACGGGAAGATGGTAGCCGTAGGACCACAAGGTACGACATTGATATGACCAAATGCATCTACTGTGGGTTCTGTCAAGAGGCATGCCCTGTTGACGCCATTGTTGAAGGACCAAACTTTGAGTTTGCTACAGAGACTCACGAGGAGCTTCTCTATGACAAAGAAAAGTTGCTCGAGAACGGAGACCGGTGGGAGACTGAGATTGCAGAGAATCTTAGATCTGAAAGCCTCTATCGCTGA MAAILARKSLLALRARQLAVSGQALQGSPFHGLQSTHLYSTSKDDEEREQLAKEISKDWSSIFERSINTLFLTEMVRGLSLTLKYFFEKKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR* Homology
BLAST of CsaV3_7G023570 vs. NCBI nr
Match: XP_004150417.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial [Cucumis sativus] >KGN44354.1 hypothetical protein Csa_016014 [Cucumis sativus]) HSP 1 Score: 444.1 bits (1141), Expect = 7.0e-121 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. NCBI nr
Match: XP_008447031.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial [Cucumis melo] >KAA0036618.1 NADH dehydrogenase (ubiquinone) iron-sulfur protein 8-B [Cucumis melo var. makuwa] >TYK03357.1 NADH dehydrogenase (ubiquinone) iron-sulfur protein 8-B [Cucumis melo var. makuwa]) HSP 1 Score: 441.4 bits (1134), Expect = 4.5e-120 Identity = 219/221 (99.10%), Postives = 220/221 (99.55%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. NCBI nr
Match: XP_038887775.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial [Benincasa hispida]) HSP 1 Score: 431.4 bits (1108), Expect = 4.7e-117 Identity = 216/222 (97.30%), Postives = 219/222 (98.65%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. NCBI nr
Match: XP_022136046.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Momordica charantia]) HSP 1 Score: 426.4 bits (1095), Expect = 1.5e-115 Identity = 214/222 (96.40%), Postives = 217/222 (97.75%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. NCBI nr
Match: XP_022933976.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Cucurbita moschata] >XP_022971419.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Cucurbita maxima] >XP_023529277.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Cucurbita pepo subsp. pepo] >KAG6588437.1 hypothetical protein SDJN03_17002, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022285.1 hypothetical protein SDJN02_16016 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 422.9 bits (1086), Expect = 1.7e-114 Identity = 210/222 (94.59%), Postives = 217/222 (97.75%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. ExPASy Swiss-Prot
Match: Q9FX83 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g16700 PE=1 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 1.3e-109 Identity = 197/222 (88.74%), Postives = 208/222 (93.69%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. ExPASy Swiss-Prot
Match: Q42599 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g79010 PE=1 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 6.4e-109 Identity = 196/222 (88.29%), Postives = 208/222 (93.69%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. ExPASy Swiss-Prot
Match: P80269 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Solanum tuberosum OX=4113 PE=1 SV=2) HSP 1 Score: 391.3 bits (1004), Expect = 7.0e-108 Identity = 195/229 (85.15%), Postives = 207/229 (90.39%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. ExPASy Swiss-Prot
Match: O24143 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 2.1e-104 Identity = 193/230 (83.91%), Postives = 204/230 (88.70%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. ExPASy Swiss-Prot
Match: O21233 (NADH-ubiquinone oxidoreductase subunit 8 OS=Reclinomonas americana OX=48483 GN=NAD8 PE=3 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 8.1e-80 Identity = 139/161 (86.34%), Postives = 150/161 (93.17%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. ExPASy TrEMBL
Match: A0A0A0K5Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G268510 PE=3 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 3.4e-121 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. ExPASy TrEMBL
Match: A0A5A7T1E5 (NADH dehydrogenase (Ubiquinone) iron-sulfur protein 8-B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2392G00160 PE=3 SV=1) HSP 1 Score: 441.4 bits (1134), Expect = 2.2e-120 Identity = 219/221 (99.10%), Postives = 220/221 (99.55%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. ExPASy TrEMBL
Match: A0A1S3BFX1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103489581 PE=3 SV=1) HSP 1 Score: 441.4 bits (1134), Expect = 2.2e-120 Identity = 219/221 (99.10%), Postives = 220/221 (99.55%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. ExPASy TrEMBL
Match: A0A6J1C2E8 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007833 PE=3 SV=1) HSP 1 Score: 426.4 bits (1095), Expect = 7.3e-116 Identity = 214/222 (96.40%), Postives = 217/222 (97.75%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. ExPASy TrEMBL
Match: A0A6J1I8H7 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111470147 PE=3 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 8.1e-115 Identity = 210/222 (94.59%), Postives = 217/222 (97.75%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. TAIR 10
Match: AT1G16700.1 (Alpha-helical ferredoxin ) HSP 1 Score: 397.1 bits (1019), Expect = 9.1e-111 Identity = 197/222 (88.74%), Postives = 208/222 (93.69%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. TAIR 10
Match: AT1G79010.1 (Alpha-helical ferredoxin ) HSP 1 Score: 394.8 bits (1013), Expect = 4.5e-110 Identity = 196/222 (88.29%), Postives = 208/222 (93.69%), Query Frame = 0
BLAST of CsaV3_7G023570 vs. TAIR 10
Match: ATCG01090.1 (NADPH dehydrogenases ) HSP 1 Score: 78.2 bits (191), Expect = 9.4e-15 Identity = 42/121 (34.71%), Postives = 62/121 (51.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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