CsaV3_7G011460 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G011460
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	AvrRpt-cleavage domain-containing protein
Location	chr7: 6273582 .. 6275268 (+)
RNA-Seq Expression	CsaV3_7G011460
Synteny	CsaV3_7G011460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCTCTCTAGAATTCATGACGGTATGCTTTCTCTTTCATTTCTGCCTCTTCAACATATTATTACAATTTTTATTTTTTCTTCTTCGCTTTCTTGCTTTGATGTGTTTTTTCGATCGGTTTCATTATTACTTCCTTCTCAATTTCCCTTTTCTTGATTCCTTCCCCCACTTTGATTTCCCTATTGATTCTTCAATTCTTTTGTTTCCCACTTTCATTTCTTTATTCCTCTTCCTGGGATTCAAGTTTATCGATTGATAGATTCTATGCTTGTTCTATTGGACCCCCATAAATCTGGATTTTCTACCAGATTTATTTAGTTGTTGGAGCTCGTTTTTCAATCAATAAATCTCTCACCTGCATTTAAATACGGATTTAACTAGTGTTGGATTGGAGGAAAAAACCTCTTGATTGTTTTATTTTGTTTGATTGATTAGTATCGGTTTTGGAGGTATTTACAAAATCTGTTGCTATAAAGCACGTTGTGTGGTAATAGATGATGGTTTTTAGATGGTAGATTCTTTGTCCGATTAGTAAGGTAACGCATAAGATTCACAGAGGGTACATCTTGTTTATTTATTACTTTTTTTTCCCCTCTTCTTGTAGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCGGCTGAGGGTTTCACTGTGATTTTCAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGAATGCACCAGATCCTGCCAAGACACCTCCTGTAAGATACATTCATAATCTTTTTCCTACTTGGGCGTTGGATGGTTGTTGTAGCTATATTGCATTCTATCTCTGTTGATAATAATTAATAAAGTAGTTGGCATCTAAACAATGCTTCTTCTATACCTCTGGACAATTGTTTGGTCTGTTACTGTCAATGAATTTCTGAGAGTGTTGATTCTCAGTTCTGACAGTATATTTATTGTATTCCAACCAATAGTTGCAAGCTTTTAGATGTTAAACACATGAAAAAAGGAACAAACAACCTTCAAAATCTATAATTTTAAGAAAAGAAAAGAAATATCACGGTAACGAGATATAGTCAGTATAAAAGGGTTTAATAGTCAGGGAAGTTGCCATCTTGCCCTTATCTGTTCTAAAGAATGCTACTTGTGTTCCTTTGGGCAATTGGTTTTGTCTGTTGCTTGCTTCTGATAGTGTGATGTGAGTGTGTATAGTAAGTATAACTCTGTTGAGCTTTGTTCAAAATCTTGGAAAGTATGAAACTGAAACATGTTGATAAAGTATCTAGAATTTAGTTAGAAGGAGAGACGATATCACATCATTTAATGTATTAACATCAGAATGTCTTTCAGTTTATATGCCTTGTTAGGAACTTTAAGTTATGAAACATGAATTTTCTAGTTTTGTTCTTCTTTGAGAGGGCTATGATTCTTCTTGCATAAATGTCGGCCTTTGAAATAAATGGTTTGATCCCGGTGCTGCATTTACCCCTTTTCTTTACTGTATATATTGTATTTACAAGTTTTCTTTGGGTTTTTTTCTTTCATGTGGATGAATATCAGAAGAAATGGCTTTGCTGTATTCAAAGTCCCACTGCTGAATCTTAAGAAGGTTCGTTTAGAAGCTACAGTTGAAAAACTTCATATTATTCTGTAA

mRNA sequence

ATGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCGGCTGAGGGTTTCACTGTGATTTTCAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGAATGCACCAGATCCTGCCAAGACACCTCCTAATGCTACTTGTGTTCCTTTGGGCAATTGGTTTTGTCTGTTGCTTGCTTCTGATAGTGTGATAAGAAATGGCTTTGCTGTATTCAAAGTCCCACTGCTGAATCTTAAGAAGGTTCGTTTAGAAGCTACAGTTGAAAAACTTCATATTATTCTGTAA

Coding sequence (CDS)

ATGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCGGCTGAGGGTTTCACTGTGATTTTCAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGAATGCACCAGATCCTGCCAAGACACCTCCTAATGCTACTTGTGTTCCTTTGGGCAATTGGTTTTGTCTGTTGCTTGCTTCTGATAGTGTGATAAGAAATGGCTTTGCTGTATTCAAAGTCCCACTGCTGAATCTTAAGAAGGTTCGTTTAGAAGCTACAGTTGAAAAACTTCATATTATTCTGTAA

Protein sequence

MDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL*

Homology

[Close]

BLAST of CsaV3_7G011460 vs. NCBI nr
Match: KAE8645904.1 (hypothetical protein Csa_011859 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 1.9e-58
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKT 60
           MDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKT
Sbjct: 1   MDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKT 60

Query: 61  PPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL 114
           PPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL
Sbjct: 61  PPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL 113

[Close]

BLAST of CsaV3_7G011460 vs. NCBI nr
Match: XP_004148923.1 (protein NOI4 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 6.1e-28
Identity = 63/75 (84.00%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 2  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP 61
          DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP
Sbjct: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP 62

Query: 62 PNATCVPLGNWFCLL 77
          P         W C +
Sbjct: 63 PK-------KWLCCI 70

[Close]

BLAST of CsaV3_7G011460 vs. NCBI nr
Match: XP_008463015.1 (PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 130.2 bits (326), Expect = 1.1e-26
Identity = 61/75 (81.33%), Postives = 62/75 (82.67%), Query Frame = 0


Query: 2  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP 61
          DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK P
Sbjct: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 62

Query: 62 PNATCVPLGNWFCLL 77
          P         W C +
Sbjct: 63 PK-------KWLCCI 70

[Close]

BLAST of CsaV3_7G011460 vs. NCBI nr
Match: KAA0048284.1 (RPM1-interacting protein 4-like isoform X2 [Cucumis melo var. makuwa] >TYK07977.1 RPM1-interacting protein 4-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 129.0 bits (323), Expect = 2.6e-26
Identity = 59/61 (96.72%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 2  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP 61
          DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK P
Sbjct: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 62

Query: 62 P 63
          P
Sbjct: 63 P 63

[Close]

BLAST of CsaV3_7G011460 vs. NCBI nr
Match: XP_008463014.1 (PREDICTED: RPM1-interacting protein 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 129.0 bits (323), Expect = 2.6e-26
Identity = 59/61 (96.72%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 2  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP 61
          DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK P
Sbjct: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 62

Query: 62 P 63
          P
Sbjct: 63 P 63

[Close]

BLAST of CsaV3_7G011460 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 8.3e-20
Identity = 51/79 (64.56%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 2  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAK 61
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K
Sbjct: 3  DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSK 62

Query: 62 TPPNATCVPLGNWFCLLLA 79
            P         W C + A
Sbjct: 63 PQPK-------KWLCCMQA 74

[Close]

BLAST of CsaV3_7G011460 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.1e-06
Identity = 21/49 (42.86%), Postives = 32/49 (65.31%), Query Frame = 0


Query: 2   DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAH 51
           +K   +PKFG+WD N+P+SA+G+T IFNK R+E+ +G       +   H
Sbjct: 143 EKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTH 191

[Close]

BLAST of CsaV3_7G011460 vs. ExPASy TrEMBL
Match: A0A0A0K6Y6 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G127370 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 4.7e-58
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 2   DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP 61
           DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP
Sbjct: 3   DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP 62

Query: 62  PNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL 114
           PNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL
Sbjct: 63  PNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKLHIIL 114

[Close]

BLAST of CsaV3_7G011460 vs. ExPASy TrEMBL
Match: A0A1S3CI91 (RPM1-interacting protein 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501257 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.6e-27
Identity = 61/75 (81.33%), Postives = 62/75 (82.67%), Query Frame = 0


Query: 2  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP 61
          DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK P
Sbjct: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 62

Query: 62 PNATCVPLGNWFCLL 77
          P         W C +
Sbjct: 63 PK-------KWLCCI 70

[Close]

BLAST of CsaV3_7G011460 vs. ExPASy TrEMBL
Match: A0A5A7TZ14 (RPM1-interacting protein 4-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001080 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.2e-26
Identity = 59/61 (96.72%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 2  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP 61
          DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK P
Sbjct: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 62

Query: 62 P 63
          P
Sbjct: 63 P 63

[Close]

BLAST of CsaV3_7G011460 vs. ExPASy TrEMBL
Match: A0A1S3CI83 (RPM1-interacting protein 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501257 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.2e-26
Identity = 59/61 (96.72%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 2  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP 61
          DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK P
Sbjct: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRTAPDPAKAP 62

Query: 62 P 63
          P
Sbjct: 63 P 63

[Close]

BLAST of CsaV3_7G011460 vs. ExPASy TrEMBL
Match: A0A6J1ID15 (uncharacterized protein LOC111474733 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111474733 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 8.9e-25
Identity = 58/75 (77.33%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 2  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP 61
          DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR+  DPAK P
Sbjct: 3  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRSGADPAKAP 62

Query: 62 PNATCVPLGNWFCLL 77
          P         W C +
Sbjct: 63 PK-------KWLCCI 70

[Close]

BLAST of CsaV3_7G011460 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 97.8 bits (242), Expect = 5.9e-21
Identity = 51/79 (64.56%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 2  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAK 61
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K
Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSK 78

Query: 62 TPPNATCVPLGNWFCLLLA 79
            P         W C + A
Sbjct: 79 PQPK-------KWLCCMQA 90

[Close]

BLAST of CsaV3_7G011460 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 95.9 bits (237), Expect = 2.2e-20
Identity = 48/63 (76.19%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 2  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAK 61
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K
Sbjct: 3  DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSK 62

Query: 62 TPP 63
            P
Sbjct: 63 PQP 65

[Close]

BLAST of CsaV3_7G011460 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 95.9 bits (237), Expect = 2.2e-20
Identity = 48/63 (76.19%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 2  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAK 61
          DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K
Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSK 78

Query: 62 TPP 63
            P
Sbjct: 79 PQP 81

[Close]

BLAST of CsaV3_7G011460 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 92.0 bits (227), Expect = 3.2e-19
Identity = 49/77 (63.64%), Postives = 52/77 (67.53%), Query Frame = 0


Query: 2  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTP 61
          DKGRPLPKFGEWDVNDP+SAEGFTVIFNKAR+EKK GGK DSPGK D  G N        
Sbjct: 3  DKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGK-DEPGYNKNGEVLEK 62

Query: 62 PNATCVPLGNWFCLLLA 79
                P   WFC + A
Sbjct: 63 ------PAKKWFCCIRA 72

[Close]

BLAST of CsaV3_7G011460 vs. TAIR 10
Match: AT5G40645.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 68.6 bits (166), Expect = 3.8e-12
Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 5  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK 60
          RPLPKFGEWDVNDP SAEGFTVIF KARD+KKT     +  +   + ++  +P K
Sbjct: 13 RPLPKFGEWDVNDPASAEGFTVIFAKARDDKKTNASGRAASQRRDNNKSQDEPTK 67

The following BLAST results are available for this feature:

BLAST of CsaV3_7G011460 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645904.1	1.9e-58	100.00	hypothetical protein Csa_011859 [Cucumis sativus]	[more]
XP_004148923.1	6.1e-28	84.00	protein NOI4 [Cucumis sativus]	[more]
XP_008463015.1	1.1e-26	81.33	PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo]	[more]
KAA0048284.1	2.6e-26	96.72	RPM1-interacting protein 4-like isoform X2 [Cucumis melo var. makuwa] >TYK07977....	[more]
XP_008463014.1	2.6e-26	96.72	PREDICTED: RPM1-interacting protein 4-like isoform X1 [Cucumis melo]	[more]

BLAST of CsaV3_7G011460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22633	8.3e-20	64.56	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
Q8GYN5	3.1e-06	42.86	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]

BLAST of CsaV3_7G011460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6Y6	4.7e-58	100.00	AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G12...	[more]
A0A1S3CI91	5.6e-27	81.33	RPM1-interacting protein 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035012...	[more]
A0A5A7TZ14	1.2e-26	96.72	RPM1-interacting protein 4-like isoform X2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CI83	1.2e-26	96.72	RPM1-interacting protein 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035012...	[more]
A0A6J1ID15	8.9e-25	77.33	uncharacterized protein LOC111474733 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CsaV3_7G011460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55850.3	5.9e-21	64.56	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.1	2.2e-20	76.19	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	2.2e-20	76.19	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G04410.1	3.2e-19	63.64	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G40645.1	3.8e-12	58.18	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 2..37 e-value: 1.5E-22 score: 78.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..62
None	No IPR available	PANTHER	PTHR33159:SF59	RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE SITE-RELATED	coord: 2..77
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 2..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G011460.1	CsaV3_7G011460.1	mRNA