CsaV3_7G008810 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCACTCCCATCGACCAACTCCAGCCCCCCCCGCCCCTTCACTCCTCCCACGCCTCTGTCGGCCCCCTCATCGCCGTCCTCGCCGTCATTTCCATCCTTGGCGTCATTGCTGGTATGATTGGCCGCCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCACACTACGACCTCGAGGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGCTCCCTCGACCCCCCTCCTCCTCCGCCTCATCTCCGCCACCCACCGCCTCTGGATTCTGTTCCTGTGGCTGAACCTCTTGGTGGGCCTCCGCCGGAGATCAAACAAAGCGCCCATGCCGATGCTGATGCTAAAGGGGAGAATTTGCAGTCGGCGGCTCCTGGAACCGGCGGTGAGTCATGAGATTTAATAAGAAGAGTAAAGTTGTTTCCTTTTTTTCTTTGTTCTTCTTTTTTGTGGTTCAATTTTTATTCTTTTACAAATCCTATCTGGTGGATGAATGAATGAATCTTTGCCTCTTTTATATATATATATATATATATATATATATTTCTCTCTCTCTTTATTTGCAATTTAAACACTAATTTCCTTCATTTTTATCCTTTACTTTGAAATATTTTTTGTAATAAACAAATTTTGTTTATCTTAGTCCTCATACACTAAAATAGTGAATTTTAATAAAAGAACTCAAATGGGCAATGTTTTTAGAAAAACAATATTTTGTGAAAGTAAAGGAAATAAAAATGAATAGTTTCAATTAAAAAATTGGAATTGAATCAAAATAATAATGAAAAAAAGAATCATACTTTCACCATAATAGTGAAAATAAGAGTGAAAGTAGCATAGTTTTTAGACATAAGAAAAGGAGACAAAGTATTTACAAATATTAGCAAAATTTGAAATATATTACTTCTTTTTTAAGTGGTTGATAGCTATATGATATATCCATATTCTAAAATTTTGCTATCTATTTAAAGAAAGTTTCGATGTTATATATCAATTGGGGGGATGGCATTGACTGTTAAGGCAAGAGACTCTTTTGTTATGTTTACATTCCCTTTTCTTTCTTTCTTTTTCTTTTTCAATACTAGGCAGGGGCTTGGTGCTAG ATGTCCACTCCCATCGACCAACTCCAGCCCCCCCCGCCCCTTCACTCCTCCCACGCCTCTGTCGGCCCCCTCATCGCCGTCCTCGCCGTCATTTCCATCCTTGGCGTCATTGCTGGTATGATTGGCCGCCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCACACTACGACCTCGAGGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGCTCCCTCGACCCCCCTCCTCCTCCGCCTCATCTCCGCCACCCACCGCCTCTGGATTCTGTTCCTGTGGCTGAACCTCTTGGTGGGCCTCCGCCGGAGATCAAACAAAGCGCCCATGCCGATGCTGATGCTAAAGGGGAGAATTTGCAGTCGGCGGCTCCTGGAACCGGCGGGGCTTGGTGCTAG ATGTCCACTCCCATCGACCAACTCCAGCCCCCCCCGCCCCTTCACTCCTCCCACGCCTCTGTCGGCCCCCTCATCGCCGTCCTCGCCGTCATTTCCATCCTTGGCGTCATTGCTGGTATGATTGGCCGCCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCACACTACGACCTCGAGGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGCTCCCTCGACCCCCCTCCTCCTCCGCCTCATCTCCGCCACCCACCGCCTCTGGATTCTGTTCCTGTGGCTGAACCTCTTGGTGGGCCTCCGCCGGAGATCAAACAAAGCGCCCATGCCGATGCTGATGCTAAAGGGGAGAATTTGCAGTCGGCGGCTCCTGGAACCGGCGGGGCTTGGTGCTAG MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLGGPPPEIKQSAHADADAKGENLQSAAPGTGGAWC* Homology
BLAST of CsaV3_7G008810 vs. NCBI nr
Match: KAE8645870.1 (hypothetical protein Csa_017149 [Cucumis sativus]) HSP 1 Score: 274.6 bits (701), Expect = 4.4e-70 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. NCBI nr
Match: XP_008455516.1 (PREDICTED: type IV secretion system protein virB10-like [Cucumis melo] >KAA0031279.1 type IV secretion system protein virB10-like [Cucumis melo var. makuwa]) HSP 1 Score: 247.3 bits (630), Expect = 7.6e-62 Identity = 126/134 (94.03%), Postives = 127/134 (94.78%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. NCBI nr
Match: XP_038887147.1 (uncharacterized protein LOC120077337 [Benincasa hispida]) HSP 1 Score: 229.9 bits (585), Expect = 1.2e-56 Identity = 118/135 (87.41%), Postives = 122/135 (90.37%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. NCBI nr
Match: XP_022972364.1 (uncharacterized protein LOC111470940 [Cucurbita maxima]) HSP 1 Score: 217.2 bits (552), Expect = 8.4e-53 Identity = 110/130 (84.62%), Postives = 115/130 (88.46%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. NCBI nr
Match: KAG7011671.1 (hypothetical protein SDJN02_26577, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 215.7 bits (548), Expect = 2.4e-52 Identity = 111/133 (83.46%), Postives = 117/133 (87.97%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. ExPASy TrEMBL
Match: A0A0A0K6N4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074850 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. ExPASy TrEMBL
Match: A0A5A7SPN0 (Type IV secretion system protein virB10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00320 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 3.7e-62 Identity = 126/134 (94.03%), Postives = 127/134 (94.78%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. ExPASy TrEMBL
Match: A0A1S3C1T9 (type IV secretion system protein virB10-like OS=Cucumis melo OX=3656 GN=LOC103495668 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 3.7e-62 Identity = 126/134 (94.03%), Postives = 127/134 (94.78%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. ExPASy TrEMBL
Match: A0A6J1IBA8 (uncharacterized protein LOC111470940 OS=Cucurbita maxima OX=3661 GN=LOC111470940 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 4.1e-53 Identity = 110/130 (84.62%), Postives = 115/130 (88.46%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. ExPASy TrEMBL
Match: A0A6J1GL66 (uncharacterized protein LOC111455383 OS=Cucurbita moschata OX=3662 GN=LOC111455383 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.4e-52 Identity = 110/131 (83.97%), Postives = 117/131 (89.31%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. TAIR 10
Match: AT2G26520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57500.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 75.9 bits (185), Expect = 2.8e-14 Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. TAIR 10
Match: AT3G57500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G26520.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12 Identity = 42/95 (44.21%), Postives = 57/95 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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