CsaV3_7G008010 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G008010
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionclassical arabinogalactan protein 9
Locationchr7: 5012017 .. 5014093 (+)
RNA-Seq ExpressionCsaV3_7G008010
SyntenyCsaV3_7G008010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGCGAATAGCGGTTGGCCACATGTGCCTCAATGCAATTTTTATAAAGAAAAATGTATGTAAATTACCTAAATGCTCTCTATCCTCTCTATTTATTCTCTCCCCTCTTTTGATTTCCCTCTCAAACGCTCATCATCGCCATCGTCCAACAAGAAGAAGAAGAAGAAGAAGAAAAATGATGGATCCTCGAGCTTTGTTGTGTTTCACTCTCATTTCCATTGCCTTCCCCCTCGCCCGAGCTCAGTCTCCCTCCAGTCCTCCCACTGCCACCCCTTCTCCTCCCACCACCTCCACCCCTCCTCCTGTTTCATCTCCCCCTCCAGCTGCTACTCCTCCTCCGGCATCCCCACCACCGGCCTCTCCACCTCCCGCATCCCCACCACCAGCGACTCCACCTCCGGCTTCCCCACCACCGGCATCTCCTCCTCCGGCTTCCCCACCACCCGCATCTCCCCCTCCGGCAACTCCTCCACCAGCATCTCCTCCTCCTCCCGCGACTCCACCACCTGCACCATTGGCATCACCGCCGACGGCAGTTCCAGCTCCTGCACCAAGTAAGAAGAAGGTGAAGGCAGCAGCTCCGAGTCCGTCTCCTGTTTCGAGCCCGCCTGCGCCGTCAGTAGAGGCTCCAGGACCTGCAGGTCCTGATCAATCTCCTACCCCATCTCAGAACGACAATGTAAGTTTCTCTCCCACATTTTTTGACATTTTTTTCAAAGGTTATTATGATATGAACTTAAACTGACTCTAAGTTTCGGTTTTGACGTTGCAAAACTTAAGAACACACACACATATATAATTCAATCCTCCACACCAAAATCTACAAATCACATATATTGTTGTAGTGATCAAATGTATTGTAATTTTAGTATGTGTTCTACAATAATGAGTTTAGTTTTAATTTAGTTCTCTACCCTTATAATTTTAATCTTAACATTTAAGCCTCATTTCTTTTTAACTTTGATATTTTAGTAAATAATCATTTTCTTCTTTTAGTATTAATCTCTTTTAAATTAATTTTTTAGAAAATGATAATTATAATTAAAATTTTCCCCTTTTGTTCAAATTAGATTTAAGATTTTATTTATTTTAAGAAATTAAATTGAAAAAATATCCGTACAAAGTTTAATAAATTTTATCTTTTTAACTTTTTTTTTTGTAAATAGTTTTTCCTAATTTTTTTAAAAAAATTCCTTTTATTTATAATTCTTTTAAATTAATTAATAGAATTAAGACAAAAACTAAAAGTAAATATCGCAAAAGTATAAAATTTAAAACTTACGTACTAAATTGAAATACGACTCAATTCTTAATAGTGATCTTTTGAAATTTAGTAACCTAGATAAAAACCCGACACCAAAATGAAGGACTAAAAATGTATTTTTTTTTCCTTCTTTCTTGTAAACTTTAAAACTAAGTTTCCTTTTGTCCTACGTTTATCTTCTTTCTATCTAGGTTTTTAACGAGCACACTATTTTTATATTTTAAAATTCACGAAGATACGAACTTTTATTAGAATGCAAATTTAATATTAAATTCAACAAATAAGTTTTGTTGATCTATATCACATAAAACCGTACATTTTTAATGGAATCATAATGTATGAACTTATAAGAGAAAGATGTATAGTTATAATGTTATTTAAATTTCTTTCCACGATTGTTTTAGATGATATTTTAGTTAGTGATTATGGATCGATTAAACATTGTTATTGTTGTTGATATTGCAGAGTGGAGTGGAGAAAGTTTGGAGAAAGGAGAGTATGGTGGGGAGCATAGTGATTGGAATGGGATATGTATTTTTGATGCTTTAGGGAGAAGAAAAGGGTTTCTTTTTGCTGTCTATGTGTTGCCTCTTCTTTTCTTTTCTTTTTTCTTTCATTATTTCTTCTTCTTTGGATGGCTCTATATTTCATTTCATTTTGATTATTATTATTAATTAGCCCATGTCTTGTTTGGGACTTTTGATTTATTATTATTAGCCTTTTGGATCAGTACTACTCTCTCTTTATATATATATATAATGACCCATTTTGCTTGGGATTCTTTTGAGGCAAAAATATCTTTGTATCTACACCC

mRNA sequence

ATGTGCCTCAATGCAATTTTTATAAAGAAAAATGTATGTAAATTACCTAAATGCTCTCTATCCTCTCTATTTATTCTCTCCCCTCTTTTGATTTCCCTCTCAAACGCTCATCATCGCCATCGTCCAACAAGAAGAAGAAGAAGAAGAAGAAAAATGATGGATCCTCGAGCTTTGTTGTGTTTCACTCTCATTTCCATTGCCTTCCCCCTCGCCCGAGCTCAGTCTCCCTCCAGTCCTCCCACTGCCACCCCTTCTCCTCCCACCACCTCCACCCCTCCTCCTGTTTCATCTCCCCCTCCAGCTGCTACTCCTCCTCCGGCATCCCCACCACCGGCCTCTCCACCTCCCGCATCCCCACCACCAGCGACTCCACCTCCGGCTTCCCCACCACCGGCATCTCCTCCTCCGGCTTCCCCACCACCCGCATCTCCCCCTCCGGCAACTCCTCCACCAGCATCTCCTCCTCCTCCCGCGACTCCACCACCTGCACCATTGGCATCACCGCCGACGGCAGTTCCAGCTCCTGCACCAAGTAAGAAGAAGGTGAAGGCAGCAGCTCCGAGTCCGTCTCCTGTTTCGAGCCCGCCTGCGCCGTCAGTAGAGGCTCCAGGACCTGCAGGTCCTGATCAATCTCCTACCCCATCTCAGAACGACAATAGTGGAGTGGAGAAAGTTTGGAGAAAGGAGAGTATGGTGGGGAGCATAGTGATTGGAATGGGATATGTATTTTTGATGCTTTAG

Coding sequence (CDS)

ATGTGCCTCAATGCAATTTTTATAAAGAAAAATGTATGTAAATTACCTAAATGCTCTCTATCCTCTCTATTTATTCTCTCCCCTCTTTTGATTTCCCTCTCAAACGCTCATCATCGCCATCGTCCAACAAGAAGAAGAAGAAGAAGAAGAAAAATGATGGATCCTCGAGCTTTGTTGTGTTTCACTCTCATTTCCATTGCCTTCCCCCTCGCCCGAGCTCAGTCTCCCTCCAGTCCTCCCACTGCCACCCCTTCTCCTCCCACCACCTCCACCCCTCCTCCTGTTTCATCTCCCCCTCCAGCTGCTACTCCTCCTCCGGCATCCCCACCACCGGCCTCTCCACCTCCCGCATCCCCACCACCAGCGACTCCACCTCCGGCTTCCCCACCACCGGCATCTCCTCCTCCGGCTTCCCCACCACCCGCATCTCCCCCTCCGGCAACTCCTCCACCAGCATCTCCTCCTCCTCCCGCGACTCCACCACCTGCACCATTGGCATCACCGCCGACGGCAGTTCCAGCTCCTGCACCAAGTAAGAAGAAGGTGAAGGCAGCAGCTCCGAGTCCGTCTCCTGTTTCGAGCCCGCCTGCGCCGTCAGTAGAGGCTCCAGGACCTGCAGGTCCTGATCAATCTCCTACCCCATCTCAGAACGACAATAGTGGAGTGGAGAAAGTTTGGAGAAAGGAGAGTATGGTGGGGAGCATAGTGATTGGAATGGGATATGTATTTTTGATGCTTTAG

Protein sequence

MCLNAIFIKKNVCKLPKCSLSSLFILSPLLISLSNAHHRHRPTRRRRRRRKMMDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLML*
Homology
BLAST of CsaV3_7G008010 vs. NCBI nr
Match: KAE8645846.1 (hypothetical protein Csa_017309 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 3.5e-105
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0

Query: 1   MCLNAIFIKKNVCKLPKCSLSSLFILSPLLISLSNAHHRHRPTRRRRRRRKMMDPRALLC 60
           MCLNAIFIKKNVCKLPKCSLSSLFILSPLLISLSNAHHRHRPTRRRRRRRKMMDPRALLC
Sbjct: 1   MCLNAIFIKKNVCKLPKCSLSSLFILSPLLISLSNAHHRHRPTRRRRRRRKMMDPRALLC 60

Query: 61  FTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPASPPPASPP 120
           FTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPASPPPASPP
Sbjct: 61  FTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPASPPPASPP 120

Query: 121 PATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPTAVPAPAPSKK 180
           PATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPTAVPAPAPSKK
Sbjct: 121 PATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPTAVPAPAPSKK 180

Query: 181 KVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMG 240
           KVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMG
Sbjct: 181 KVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMG 240

Query: 241 YVFLML 247
           YVFLML
Sbjct: 241 YVFLML 246

BLAST of CsaV3_7G008010 vs. NCBI nr
Match: XP_004136948.3 (classical arabinogalactan protein 9 [Cucumis sativus])

HSP 1 Score: 295.0 bits (754), Expect = 5.8e-76
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0

Query: 52  MMDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPP 111
           MMDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPP
Sbjct: 1   MMDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPP 60

Query: 112 ASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPTA 171
           ASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPTA
Sbjct: 61  ASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPTA 120

Query: 172 VPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESM 231
           VPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESM
Sbjct: 121 VPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESM 180

Query: 232 VGSIVIGMGYVFLML 247
           VGSIVIGMGYVFLML
Sbjct: 181 VGSIVIGMGYVFLML 195

BLAST of CsaV3_7G008010 vs. NCBI nr
Match: XP_008455018.1 (PREDICTED: classical arabinogalactan protein 9 [Cucumis melo] >KAA0031352.1 classical arabinogalactan protein 9 [Cucumis melo var. makuwa] >TYK06805.1 classical arabinogalactan protein 9 [Cucumis melo var. makuwa])

HSP 1 Score: 256.9 bits (655), Expect = 1.8e-64
Identity = 186/208 (89.42%), Postives = 189/208 (90.87%), Query Frame = 0

Query: 52  MMDPRA-LLCFTLISIAFPLARAQSPSSPPTATPSPPTT------STPPPVSS------P 111
           MMDPRA LLCFT ISIAF +A AQSPSSPPTATPSPPTT      STPPPVSS      P
Sbjct: 1   MMDPRAFLLCFTFISIAFAIAGAQSPSSPPTATPSPPTTSAPPPASTPPPVSSPPPAATP 60

Query: 112 PPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPASPPPPA 171
           PPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPA+PPPAS PPPA
Sbjct: 61  PPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPASPPPAS-PPPA 120

Query: 172 TPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQND 231
            PPPAPLASPPTAVPAPAPSKKKVKAAAP P+PVSSPPAPSVEAPGPAGPDQSPTPSQND
Sbjct: 121 IPPPAPLASPPTAVPAPAPSKKKVKAAAPGPAPVSSPPAPSVEAPGPAGPDQSPTPSQND 180

Query: 232 NSGVEKVWRKESMVGSIVIGMGYVFLML 247
           NSGVEKVWRKESMVGSIVIGMGYVFLML
Sbjct: 181 NSGVEKVWRKESMVGSIVIGMGYVFLML 207

BLAST of CsaV3_7G008010 vs. NCBI nr
Match: XP_023553858.1 (classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.0 bits (541), Expect = 2.9e-51
Identity = 161/207 (77.78%), Postives = 178/207 (85.99%), Query Frame = 0

Query: 53  MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTT------STPPPVSSPPPA----A 112
           MDP+AL CFTLISIAF +A AQ PSSPPTAT +PPTT      +TPPPVSSPPPA    A
Sbjct: 1   MDPQALFCFTLISIAFAVAGAQPPSSPPTATLAPPTTTTAPPPATPPPVSSPPPATPPPA 60

Query: 113 TPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPASP----PPPA 172
           +PPPA+PPPASPPPA+PPPA+PPPA+PPPASPPPA+PPPASPPPATPPPASP    PPPA
Sbjct: 61  SPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPA 120

Query: 173 TPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQND 232
           TPPP PLASPP AVPAPAPSKKK+K AAP P+PVSSPP PS E PGPAGP +SPTPSQND
Sbjct: 121 TPPPTPLASPPAAVPAPAPSKKKLK-AAPGPAPVSSPPMPSAEGPGPAGP-ESPTPSQND 180

Query: 233 NSGVEKVWRKESMVGSIVIGMGYVFLM 246
           NSGVEK WRKE+MVGS++IGMGYV +M
Sbjct: 181 NSGVEKSWRKETMVGSMLIGMGYVLMM 205

BLAST of CsaV3_7G008010 vs. NCBI nr
Match: KAG6571935.1 (hypothetical protein SDJN03_28663, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 212.6 bits (540), Expect = 3.8e-51
Identity = 162/217 (74.65%), Postives = 179/217 (82.49%), Query Frame = 0

Query: 53  MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTT------STPPPVSSPPPA----- 112
           MDP+AL C TLISIAF +A AQ PSSPPTATP+PPTT      +TPPPVS+PPPA     
Sbjct: 1   MDPQALFCLTLISIAFAVAGAQPPSSPPTATPAPPTTTTTPPPATPPPVSAPPPATPPPA 60

Query: 113 ---------ATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPA 172
                    ATPPPASPPPA+PPPASPPPATPPPASPPPA+PPPASPPPA+PPPA+PPPA
Sbjct: 61  TPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPA 120

Query: 173 SP----PPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGP 232
           +P    PPPATPPPAPLASPP AVPAPAPSKKK+K AAP P+PVSSPP PS E PGPAGP
Sbjct: 121 TPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLK-AAPGPAPVSSPPMPSAEGPGPAGP 180

Query: 233 DQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLM 246
            +SPTPSQNDNSGVEK WRKE+MVGS++IGMGYV +M
Sbjct: 181 -ESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMM 215

BLAST of CsaV3_7G008010 vs. ExPASy Swiss-Prot
Match: Q9C5S0 (Classical arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=AGP9 PE=1 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 2.0e-18
Identity = 110/199 (55.28%), Postives = 136/199 (68.34%), Query Frame = 0

Query: 57  ALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPP--ASPPP--A 116
           A++C  LI+        Q+P+SPPTATP+PPT +TPPP ++PPP + PPP   SPPP   
Sbjct: 8   AVICIVLIA----GVTGQAPTSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTT 67

Query: 117 SPPPASPPP--ATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPT 176
           +PPPA+PPP  ++PPPASPPPA+PPP + PP  PP A+PPPA+PPP ATPPPAPLASPP 
Sbjct: 68  APPPANPPPPVSSPPPASPPPATPPPVASPP--PPVASPPPATPPPVATPPPAPLASPPA 127

Query: 177 AVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQ---NDNSGVEKVWR 236
            VPAPAP+    K  +PSPSP SSPP PS +APGP+    SP PS    ND +G  K   
Sbjct: 128 QVPAPAPT---TKPDSPSPSPSSSPPLPSSDAPGPSTDSISPAPSPTDVNDQNGASK--- 187

Query: 237 KESMVGSIVIGMGYVFLML 247
              MV S+V G   V+ M+
Sbjct: 188 ---MVSSLVFGSVLVWFMI 191

BLAST of CsaV3_7G008010 vs. ExPASy TrEMBL
Match: A0A0A0K6D8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071560 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 1.1e-75
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0

Query: 53  MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPA 112
           MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPA
Sbjct: 1   MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPA 60

Query: 113 SPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPTAV 172
           SPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPTAV
Sbjct: 61  SPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPTAV 120

Query: 173 PAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMV 232
           PAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMV
Sbjct: 121 PAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMV 180

Query: 233 GSIVIGMGYVFLML 247
           GSIVIGMGYVFLML
Sbjct: 181 GSIVIGMGYVFLML 194

BLAST of CsaV3_7G008010 vs. ExPASy TrEMBL
Match: A0A5A7SJX5 (Classical arabinogalactan protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001070 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 8.5e-65
Identity = 186/208 (89.42%), Postives = 189/208 (90.87%), Query Frame = 0

Query: 52  MMDPRA-LLCFTLISIAFPLARAQSPSSPPTATPSPPTT------STPPPVSS------P 111
           MMDPRA LLCFT ISIAF +A AQSPSSPPTATPSPPTT      STPPPVSS      P
Sbjct: 1   MMDPRAFLLCFTFISIAFAIAGAQSPSSPPTATPSPPTTSAPPPASTPPPVSSPPPAATP 60

Query: 112 PPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPASPPPPA 171
           PPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPA+PPPAS PPPA
Sbjct: 61  PPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPASPPPAS-PPPA 120

Query: 172 TPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQND 231
            PPPAPLASPPTAVPAPAPSKKKVKAAAP P+PVSSPPAPSVEAPGPAGPDQSPTPSQND
Sbjct: 121 IPPPAPLASPPTAVPAPAPSKKKVKAAAPGPAPVSSPPAPSVEAPGPAGPDQSPTPSQND 180

Query: 232 NSGVEKVWRKESMVGSIVIGMGYVFLML 247
           NSGVEKVWRKESMVGSIVIGMGYVFLML
Sbjct: 181 NSGVEKVWRKESMVGSIVIGMGYVFLML 207

BLAST of CsaV3_7G008010 vs. ExPASy TrEMBL
Match: A0A1S3BZW9 (classical arabinogalactan protein 9 OS=Cucumis melo OX=3656 GN=LOC103495292 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 8.5e-65
Identity = 186/208 (89.42%), Postives = 189/208 (90.87%), Query Frame = 0

Query: 52  MMDPRA-LLCFTLISIAFPLARAQSPSSPPTATPSPPTT------STPPPVSS------P 111
           MMDPRA LLCFT ISIAF +A AQSPSSPPTATPSPPTT      STPPPVSS      P
Sbjct: 1   MMDPRAFLLCFTFISIAFAIAGAQSPSSPPTATPSPPTTSAPPPASTPPPVSSPPPAATP 60

Query: 112 PPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPASPPPPA 171
           PPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPA+PPPAS PPPA
Sbjct: 61  PPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPASPPPAS-PPPA 120

Query: 172 TPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQND 231
            PPPAPLASPPTAVPAPAPSKKKVKAAAP P+PVSSPPAPSVEAPGPAGPDQSPTPSQND
Sbjct: 121 IPPPAPLASPPTAVPAPAPSKKKVKAAAPGPAPVSSPPAPSVEAPGPAGPDQSPTPSQND 180

Query: 232 NSGVEKVWRKESMVGSIVIGMGYVFLML 247
           NSGVEKVWRKESMVGSIVIGMGYVFLML
Sbjct: 181 NSGVEKVWRKESMVGSIVIGMGYVFLML 207

BLAST of CsaV3_7G008010 vs. ExPASy TrEMBL
Match: A0A6J1GK65 (classical arabinogalactan protein 9-like OS=Cucurbita moschata OX=3662 GN=LOC111455113 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50
Identity = 161/210 (76.67%), Postives = 175/210 (83.33%), Query Frame = 0

Query: 53  MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTT-----STPPPVSSPPPA---ATP 112
           MDP+AL CFTLI +AF +A AQ PSSPPTA   P TT     +TPPPVS+PPPA   ATP
Sbjct: 1   MDPQALFCFTLIFVAFAVAGAQPPSSPPTAXXXPTTTTAPPPATPPPVSAPPPATPPATP 60

Query: 113 PPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPASP---------P 172
           PPASPPPA+PPPASPPPATPPPASPPPASPPPA+PPPASPPPATPPPASP         P
Sbjct: 61  PPASPPPATPPPASPPPATPPPASPPPASPPPATPPPASPPPATPPPASPPPATPPPATP 120

Query: 173 PPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPS 232
           PPATPPPAPLASPP AVPAPAPSKKK+K AAP P+PVSSPP PS E PGPAGP +SPTPS
Sbjct: 121 PPATPPPAPLASPPAAVPAPAPSKKKLK-AAPGPAPVSSPPMPSAEGPGPAGP-ESPTPS 180

Query: 233 QNDNSGVEKVWRKESMVGSIVIGMGYVFLM 246
           QNDNSGVEK WRKE+MVGS++IGMGYV +M
Sbjct: 181 QNDNSGVEKSWRKETMVGSMLIGMGYVLMM 208

BLAST of CsaV3_7G008010 vs. ExPASy TrEMBL
Match: A0A6J1I8J9 (classical arabinogalactan protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111470982 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.4e-38
Identity = 144/230 (62.61%), Postives = 159/230 (69.13%), Query Frame = 0

Query: 53  MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPP------------------------- 112
           MDP+AL CFTLISIAF +A AQ PSSPPTATP+PP                         
Sbjct: 1   MDPQALFCFTLISIAFAVAGAQPPSSPPTATPAPPXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 113 ------------TTSTPPPVSSPPPAATPPPASPPPASPPPASPPPATPPPASPPPASPP 172
                                     ATPPPASPPPA+PPPASPPPATPPPASPPPA+PP
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXATPPPASPPPATPPPASPPPATPPPASPPPATPP 120

Query: 173 PASPPPASPPPATPPPASPPPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPVSSP 232
           PASPPPA+PPPAT      PPPATPPPAPLASPP AVPAPAPSKKK+K AAP  +PVSSP
Sbjct: 121 PASPPPATPPPAT------PPPATPPPAPLASPPAAVPAPAPSKKKLK-AAPGSAPVSSP 180

Query: 233 PAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLM 246
           P PS E PGPAGP +SPTPSQNDNSGVEK WRKE+++GS++IGMGYV +M
Sbjct: 181 PMPSAEGPGPAGP-ESPTPSQNDNSGVEKSWRKETVLGSMLIGMGYVLMM 222

BLAST of CsaV3_7G008010 vs. TAIR 10
Match: AT2G14890.1 (arabinogalactan protein 9 )

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-19
Identity = 110/199 (55.28%), Postives = 136/199 (68.34%), Query Frame = 0

Query: 57  ALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPP--ASPPP--A 116
           A++C  LI+        Q+P+SPPTATP+PPT +TPPP ++PPP + PPP   SPPP   
Sbjct: 8   AVICIVLIA----GVTGQAPTSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTT 67

Query: 117 SPPPASPPP--ATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPT 176
           +PPPA+PPP  ++PPPASPPPA+PPP + PP  PP A+PPPA+PPP ATPPPAPLASPP 
Sbjct: 68  APPPANPPPPVSSPPPASPPPATPPPVASPP--PPVASPPPATPPPVATPPPAPLASPPA 127

Query: 177 AVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQ---NDNSGVEKVWR 236
            VPAPAP+    K  +PSPSP SSPP PS +APGP+    SP PS    ND +G  K   
Sbjct: 128 QVPAPAPT---TKPDSPSPSPSSSPPLPSSDAPGPSTDSISPAPSPTDVNDQNGASK--- 187

Query: 237 KESMVGSIVIGMGYVFLML 247
              MV S+V G   V+ M+
Sbjct: 188 ---MVSSLVFGSVLVWFMI 191

BLAST of CsaV3_7G008010 vs. TAIR 10
Match: AT2G14890.2 (arabinogalactan protein 9 )

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-17
Identity = 100/168 (59.52%), Postives = 122/168 (72.62%), Query Frame = 0

Query: 57  ALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPP--ASPPP--A 116
           A++C  LI+        Q+P+SPPTATP+PPT +TPPP ++PPP + PPP   SPPP   
Sbjct: 8   AVICIVLIA----GVTGQAPTSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTT 67

Query: 117 SPPPASPPP--ATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPT 176
           +PPPA+PPP  ++PPPASPPPA+PPP + PP  PP A+PPPA+PPP ATPPPAPLASPP 
Sbjct: 68  APPPANPPPPVSSPPPASPPPATPPPVASPP--PPVASPPPATPPPVATPPPAPLASPPA 127

Query: 177 AVPAPAPSKKKVKAAAPSPSPVSSPPAPSVEAPGPAGPDQSPTPSQND 219
            VPAPAP+    K  +PSPSP SSPP PS +APGP+    SP PS  D
Sbjct: 128 QVPAPAPT---TKPDSPSPSPSSSPPLPSSDAPGPSTDSISPAPSPTD 166

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8645846.13.5e-105100.00hypothetical protein Csa_017309 [Cucumis sativus][more]
XP_004136948.35.8e-76100.00classical arabinogalactan protein 9 [Cucumis sativus][more]
XP_008455018.11.8e-6489.42PREDICTED: classical arabinogalactan protein 9 [Cucumis melo] >KAA0031352.1 clas... [more]
XP_023553858.12.9e-5177.78classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo][more]
KAG6571935.13.8e-5174.65hypothetical protein SDJN03_28663, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Q9C5S02.0e-1855.28Classical arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=AGP9 PE=1... [more]
Match NameE-valueIdentityDescription
A0A0A0K6D81.1e-75100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071560 PE=4 SV=1[more]
A0A5A7SJX58.5e-6589.42Classical arabinogalactan protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A1S3BZW98.5e-6589.42classical arabinogalactan protein 9 OS=Cucumis melo OX=3656 GN=LOC103495292 PE=4... [more]
A0A6J1GK651.6e-5076.67classical arabinogalactan protein 9-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1I8J91.4e-3862.61classical arabinogalactan protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC11147... [more]
Match NameE-valueIdentityDescription
AT2G14890.11.4e-1955.28arabinogalactan protein 9 [more]
AT2G14890.21.0e-1759.52arabinogalactan protein 9 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 97..114
score: 33.33
coord: 80..96
score: 40.0
coord: 120..145
score: 38.46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..225
NoneNo IPR availablePANTHERPTHR37209:SF1CLASSICAL ARABINOGALACTAN PROTEIN 9coord: 53..246
IPR044981Lysine-rich arabinogalactan protein AGP9/17/18PANTHERPTHR37209LYSINE-RICH ARABINOGALACTAN PROTEIN 17-RELATEDcoord: 53..246

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G008010.1CsaV3_7G008010.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005886 plasma membrane