CsaV3_7G007960 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G007960
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	RING-type domain-containing protein
Location	chr7: 4987024 .. 4989843 (+)
RNA-Seq Expression	CsaV3_7G007960
Synteny	CsaV3_7G007960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCAACCTAATTTAACCCATAAATTCCCCCAATACTCAATACAACCAAATGGACATCACATCTTACCTCTAAGCTCACAAATTATTACAAACCAAATCAATAAAAGACAAAAGCTATAAAGATAAGAACTAATTCATCCATTGAGTTCTTCATTTCCAATCCAATCCACGTCCACTTTTTATTTCAAGTAACTAAGCAAATCTCCTCTCCATTACCTTCAACTTCCATCCACATTTCTTCGAAATTTCGACTCCATTTCTTCCCAGTTTCAAACCCTTTTCATTTTTCCTTCATTCGCCTTCGTTTTGAGTGAAAACAATCCTAAACAATCCTACAACCGGCTGAGTTTGTGCATGACGAGCGCTTCGGAGCTGTTTTATTGTCGGAGGTATAGATTTGGTCGCACTGACTCTGACTTGGGCCTTGATTCTGAGCCTCCCGATCGGCATCTTCAGTATCAACGTCGTCATCATGGTCACAATGGCAATCACCGCCGCGACTTGAACTCCTGTGGCGATTTCCGGCGTTCCTCGTTGCAAGAACGTCGTCAATCTCCTCGGTTTTTTAACCCTGTAAGAAGGATTAAACAAATTTTGCCAGATTCTGGGTTTATGTTATTTGACAATTTTTTTTACTTGGATGAAGTATATATTAACCGGTTGAGAATAGTTGGATTTGGAAGAACTGTTTATAACTTGTTTTGATTGGGAAATTTTTAAGCGTTTCCGACTTAAAATTTCTTCTAAACTGTAGAACCTGTTGGGAATATGTTGAAAATATCATATTTGCCCTAATTTATCAGCTTAGGTTGTTGGTATGGTTTTACTTGGTTCATGCCCTAAGAATAATTGCACTTAACTATGGATTGATCCAACAAACGACTCTATTGATAACCGTTTAATTTTTTGGTTTTGAAAATTAAGCTTGTTGCTTCCAAGTTCCAAGTATGGATTTCTTTATTTTGTTTATGTTTTCAATATCCGGGCTTAAAGGAATAATTTTTAGAAGCTTGTTTTGTTTTTAAAATTAGGCAAGATGAAAACTATTGGAAAGAAATCGTTTGAAAACAGGGACAGTTTTTCAGAAACCAAATGGTTATTAAATTGATCTCTAGCTGCCAAGCTATTGATTTGATTATTGTTATTCTTCAGTGATCATTCTGTTTTCCATTGCCGTGAAATAATTAGAACCAGAATAAGTCAACTTGGTACTGAGAGTGACGATGGATATAACTTTTCAAGTTTTATTAGCTTCTAAATGCTACTTTGCTATTAAACTATGATTTAATTGGTATGTGTTCATGGAAACATAATTTGGTTACAATTAAGAATGCTTTTCTTTATTATTATTGTTCTTTTTTTTATCTGGGTTGTCATCTCTGTCTGAATTTTAACTTCAATTAGTTTGGAGGCATTAACACTATGTTTTCGTTGTAGCTTTCCGTTGATCGATCACCTGCACAGTCTGACTCAGCTACGAGCGTTGCTTCTAGAAATAATATCAATGGAAATACTCAGAATAGCTTGAGGTCTGGGTTAAGTGGGGATTCCAGATTGCCAGGATCTGTTTTACTTGCTAGAGAAAGGCTTCTCGAGAGATTGAGGGGTGCCTCGTCACCGACGACCAGGTCAGTTCCTATTGTCATTTCCTTGTTTTTCACATTACTATTCAGAAAACATTTCTGACTTCAACTAGAATGTTCCTTGCTATTTGTCTAGATTTAACGGCATATTTGGAAGCGATCTTACAATTGTTAGAAACACTTTTCTTATGTTTATAATCACTCTAAAACATGTCTTTAGTCATTCAAAGTTTAAAAATCAATTGATTATTTGATTTCACACGTTTAAACTTGATTTTTATATAATCAAAGTTGATTTTGAATACTTAAAAGAATGCTCGTAAGCATATGCTGTGGTATATGAATCTACTTGTATGATTTTCTTTTGTCGATAGGGATTTGGTTTCTATTGTGTACTCATGAAATAGGATCCAATTCCAACAAACTCGTAGAGTTTCTACAAACTCTGTCTAAGACTTTTAAAGATAAATTGTTACTAGAATAGATCCCAGCTCTGTCGTGTATTGCTAACCGAATAAGTTTATTCATCAGAAACGCTCTTGTTGAAGCATCAAATGGAAATCCAGAAACCACGACAAGTCGATCACAGAGGATATCCCTCGTCGATGCTGACAGGATGCGGTTAGTAGCTGTACCTAGCAAGAGGCCCCCTGGTCTTTCACAGGATGCAATCAACCGCTTACAACTTGAGGTTTTTATCAATACAGATCATATCATCAACGACGGCGTGATGACAATAACATCAACAGACTGTAGTATATGTCTAGAGAGTTTCACAGATGGAGACAAGCTCATCCATTTACCTTGTGAGCACAAATTTCACCATCCTTGCCTGGACCGATGGATTAGAACTTGTGGAGAATGTCCATATTGTCGACAACATATCGCCATCAACTAATATTTTTCTAACACGTTTCGCAACTTGGGATTTCCTGTATGTGTAGAAAACTCAGAGACAATCCATTGTTCCAAGTTGTGGTATTAATCTTTTATAGTTCTATAGTTGATGATGTTCGTACTTGTATCCTTCTAAGATCCTGTATTGACTCCAAATTGTGTGGCAATTTTAATAGCCAAAGAGGACGCTTACATGATTTCTCTTCTTTTTCTTCGTTTCATGTAATTTATATTTGATTTCTTATCATTTTGGTTAGGGTACAAACTATTCTAAGATTATAATTACCACCACTTGCTACAATAACTATTATTTAAAAGTTTTCAATTAGTTATACGTTTTT

mRNA sequence

ATGACGAGCGCTTCGGAGCTGTTTTATTGTCGGAGGTATAGATTTGGTCGCACTGACTCTGACTTGGGCCTTGATTCTGAGCCTCCCGATCGGCATCTTCAGTATCAACGTCGTCATCATGGTCACAATGGCAATCACCGCCGCGACTTGAACTCCTGTGGCGATTTCCGGCGTTCCTCGTTGCAAGAACGTCGTCAATCTCCTCGGTTTTTTAACCCTCTTTCCGTTGATCGATCACCTGCACAGTCTGACTCAGCTACGAGCGTTGCTTCTAGAAATAATATCAATGGAAATACTCAGAATAGCTTGAGGTCTGGGTTAAGTGGGGATTCCAGATTGCCAGGATCTGTTTTACTTGCTAGAGAAAGGCTTCTCGAGAGATTGAGGGGTGCCTCGTCACCGACGACCAGAAACGCTCTTGTTGAAGCATCAAATGGAAATCCAGAAACCACGACAAGTCGATCACAGAGGATATCCCTCGTCGATGCTGACAGGATGCGGTTAGTAGCTGTACCTAGCAAGAGGCCCCCTGGTCTTTCACAGGATGCAATCAACCGCTTACAACTTGAGGTTTTTATCAATACAGATCATATCATCAACGACGGCGTGATGACAATAACATCAACAGACTGTAGTATATGTCTAGAGAGTTTCACAGATGGAGACAAGCTCATCCATTTACCTTGTGAGCACAAATTTCACCATCCTTGCCTGGACCGATGGATTAGAACTTGTGGAGAATGTCCATATTGTCGACAACATATCGCCATCAACTAA

Coding sequence (CDS)

ATGACGAGCGCTTCGGAGCTGTTTTATTGTCGGAGGTATAGATTTGGTCGCACTGACTCTGACTTGGGCCTTGATTCTGAGCCTCCCGATCGGCATCTTCAGTATCAACGTCGTCATCATGGTCACAATGGCAATCACCGCCGCGACTTGAACTCCTGTGGCGATTTCCGGCGTTCCTCGTTGCAAGAACGTCGTCAATCTCCTCGGTTTTTTAACCCTCTTTCCGTTGATCGATCACCTGCACAGTCTGACTCAGCTACGAGCGTTGCTTCTAGAAATAATATCAATGGAAATACTCAGAATAGCTTGAGGTCTGGGTTAAGTGGGGATTCCAGATTGCCAGGATCTGTTTTACTTGCTAGAGAAAGGCTTCTCGAGAGATTGAGGGGTGCCTCGTCACCGACGACCAGAAACGCTCTTGTTGAAGCATCAAATGGAAATCCAGAAACCACGACAAGTCGATCACAGAGGATATCCCTCGTCGATGCTGACAGGATGCGGTTAGTAGCTGTACCTAGCAAGAGGCCCCCTGGTCTTTCACAGGATGCAATCAACCGCTTACAACTTGAGGTTTTTATCAATACAGATCATATCATCAACGACGGCGTGATGACAATAACATCAACAGACTGTAGTATATGTCTAGAGAGTTTCACAGATGGAGACAAGCTCATCCATTTACCTTGTGAGCACAAATTTCACCATCCTTGCCTGGACCGATGGATTAGAACTTGTGGAGAATGTCCATATTGTCGACAACATATCGCCATCAACTAA

Protein sequence

MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSSLQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLARERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLSQDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHIAIN*

Homology

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BLAST of CsaV3_7G007960 vs. NCBI nr
Match: XP_004136947.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucumis sativus] >KGN43862.1 hypothetical protein Csa_017364 [Cucumis sativus])

HSP 1 Score: 521.2 bits (1341), Expect = 5.2e-144
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240
           QDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR
Sbjct: 181 QDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240

Query: 241 WIRTCGECPYCRQHIAIN 259
           WIRTCGECPYCRQHIAIN
Sbjct: 241 WIRTCGECPYCRQHIAIN 258

[Close]

BLAST of CsaV3_7G007960 vs. NCBI nr
Match: XP_008455026.1 (PREDICTED: E3 ubiquitin-protein ligase RLIM [Cucumis melo] >KAA0031356.1 E3 ubiquitin-protein ligase RLIM [Cucumis melo var. makuwa] >TYK06808.1 E3 ubiquitin-protein ligase RLIM [Cucumis melo var. makuwa])

HSP 1 Score: 492.7 bits (1267), Expect = 2.0e-135
Identity = 244/256 (95.31%), Postives = 250/256 (97.66%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDR+LQYQRRHHGHN NHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSV SRNNINGNTQNSLRSGLSGDSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPT+RNALVEASNGNPE +TSRSQRISL+DADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240
           QDAINRLQLEVFINTD II+D VMTITSTDCSICLESFTDGDKLIHLPCEHKFHH CLDR
Sbjct: 181 QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR 240

Query: 241 WIRTCGECPYCRQHIA 257
           WIRTCGECPYCRQHI+
Sbjct: 241 WIRTCGECPYCRQHIS 256

[Close]

BLAST of CsaV3_7G007960 vs. NCBI nr
Match: XP_038888994.1 (probable E3 ubiquitin-protein ligase RHY1A [Benincasa hispida])

HSP 1 Score: 443.0 bits (1138), Expect = 1.8e-120
Identity = 221/259 (85.33%), Postives = 235/259 (90.73%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFY RRYR GRTD+DLGLDSEPPDR+LQYQRRHHGHN NHRRD NSCG FRRSS
Sbjct: 1   MTSASELFYSRRYRLGRTDADLGLDSEPPDRYLQYQRRHHGHNANHRRDFNSCGTFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDR P QSDS TS  SRNNIN NTQNSLR+GLSGDSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRLPTQSDSVTSDGSRNNINPNTQNSLRTGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSP +RNALVEA +G+PE +T+RSQRISLVDADRM+LV  PSKRPPGLS
Sbjct: 121 RERLLERLRGASSPRSRNALVEALDGSPEISTNRSQRISLVDADRMQLVPAPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINDGV-MTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLD 240
           QDAI+RLQLEVFINT+HII+D V  T TS +CSICLESFTDGD LIHLPCEHKFHH CLD
Sbjct: 181 QDAIDRLQLEVFINTEHIIDDDVTTTTTSNECSICLESFTDGDVLIHLPCEHKFHHACLD 240

Query: 241 RWIRTCGECPYCRQHIAIN 259
           RWIRTCGECPYCRQH+ IN
Sbjct: 241 RWIRTCGECPYCRQHVVIN 259

[Close]

BLAST of CsaV3_7G007960 vs. NCBI nr
Match: XP_022988901.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucurbita maxima])

HSP 1 Score: 407.9 bits (1047), Expect = 6.5e-110
Identity = 205/259 (79.15%), Postives = 223/259 (86.10%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELF+ RRYR GRTD+DLGLDSEPPDRHLQYQRRHHGHNGNHRR LN+CG FRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQER QSPRF NPL+VDRSPAQS+S  SV SRNNIN N QNSLR GLSGDSRLPGSVLLA
Sbjct: 61  LQERHQSPRFLNPLAVDRSPAQSESGISVGSRNNINANIQNSLRPGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERL ERLRGASSPT RN LVEA + +PE + SRSQ ISL DADR+RLV   SKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINDGV-MTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLD 240
            +AIN LQLE FI+ +HII+D + MT TS DCSICL+SF DGDKLIHLPC+HKFHH CL+
Sbjct: 181 LEAINCLQLERFIDIEHIIDDDLTMTTTSNDCSICLDSFIDGDKLIHLPCKHKFHHACLE 240

Query: 241 RWIRTCGECPYCRQHIAIN 259
            WIRTCGECPYCRQHI +N
Sbjct: 241 PWIRTCGECPYCRQHIVVN 259

[Close]

BLAST of CsaV3_7G007960 vs. NCBI nr
Match: XP_023529438.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407.9 bits (1047), Expect = 6.5e-110
Identity = 205/259 (79.15%), Postives = 224/259 (86.49%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELF+ RRYR GRTD+DLGLDSEPPDRHLQYQRRHHGHNGNHRR LN+CG FRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQERRQSPRF NPL+VDRSPAQS+S  SV SRNNIN N QNSLR GLSGDSRLPGSVLLA
Sbjct: 61  LQERRQSPRFLNPLAVDRSPAQSESGISVGSRNNINANIQNSLRPGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERL ERLRGASSPT RN LVEA + +PE + SRSQ ISL DADR+RLV   SKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINDGVMTI-TSTDCSICLESFTDGDKLIHLPCEHKFHHPCLD 240
           Q+AIN LQLE FI+ +HII+D +  I TS DCSICL+SF DGDKLIHLPC+HKFHH CL+
Sbjct: 181 QEAINCLQLERFIDIEHIIDDDLTMIRTSNDCSICLDSFIDGDKLIHLPCKHKFHHACLE 240

Query: 241 RWIRTCGECPYCRQHIAIN 259
           +WIRTCGECPYCRQ I +N
Sbjct: 241 QWIRTCGECPYCRQRIVVN 259

[Close]

BLAST of CsaV3_7G007960 vs. ExPASy Swiss-Prot
Match: Q852U6 (Probable E3 ubiquitin-protein ligase RHY1A OS=Arabidopsis thaliana OX=3702 GN=RHY1A PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.7e-36
Identity = 100/258 (38.76%), Postives = 139/258 (53.88%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHG-HNGNHRRDLNSCGDFRRS 60
           MTSASELF  RR R GR+D  L  D+     H  +  R HG H+ N R D + C   RR 
Sbjct: 1   MTSASELFSTRRSRPGRSDPALESDTSSYRHHSHHHHRRHGVHHHNQRHDSDGCDPLRRP 60

Query: 61  SLQERRQSPRFFNPLSVDRSPAQSDSATS-VASRNNINGNTQNSLRSGLSGDSRLPGSVL 120
           + + RR    F +P+     P +    TS   + ++ +  TQ+S    L+G  RLPG+VL
Sbjct: 61  TPRLRR---FFHHPIQERSRPIRDVQGTSQYLNTDSTDTETQSSSFVNLNGSERLPGAVL 120

Query: 121 LARERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPG 180
           LAR+RL ERLRG S  +   +   + +   E++        +     +++    +K+P G
Sbjct: 121 LARDRLFERLRGVSLSSNSRSNRVSLDDQRESSFHSIDGDPIFQLAGLQVTYECNKKPQG 180

Query: 181 LSQDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCL 240
           L+QDAIN L  + F + +       +     DCSICLESFT GD LI LPC H FH  CL
Sbjct: 181 LTQDAINCLHRQTFSSAE-------VKSEMRDCSICLESFTKGDMLISLPCTHSFHSSCL 240

Query: 241 DRWIRTCGECPYCRQHIA 257
           + W+R CG+CP CR+ IA
Sbjct: 241 NPWLRACGDCPCCRRAIA 248

[Close]

BLAST of CsaV3_7G007960 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 2.1e-10
Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 0


Query: 176 PPGLSQDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLP-CEHKFH 235
           P GL +  IN++ +  +   D  ++       +TDCS+CL  F+DG+ L  LP C H FH
Sbjct: 129 PSGLDETLINKITVCKYRRGDGFVH-------TTDCSVCLGEFSDGESLRLLPRCSHAFH 188

Query: 236 HPCLDRWIRTCGECPYCRQHI 256
             C+D W+++   CP CR +I
Sbjct: 189 QQCIDTWLKSHSNCPLCRANI 202

[Close]

BLAST of CsaV3_7G007960 vs. ExPASy Swiss-Prot
Match: A5WWA0 (E3 ubiquitin-protein ligase znrf3 OS=Danio rerio OX=7955 GN=znrf3 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 4.6e-10
Identity = 24/56 (42.86%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 200 NDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHI 256
           +D V + +++DC+ICLE + DG++L  +PC H+FH  C+D W+     CP+CR +I
Sbjct: 256 SDSVSSSSTSDCAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNI 311

[Close]

BLAST of CsaV3_7G007960 vs. ExPASy Swiss-Prot
Match: Q9NVW2 (E3 ubiquitin-protein ligase RLIM OS=Homo sapiens OX=9606 GN=RLIM PE=1 SV=3)

HSP 1 Score: 66.2 bits (160), Expect = 6.1e-10
Identity = 50/177 (28.25%), Postives = 82/177 (46.33%), Query Frame = 0


Query: 79  SPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLARERLLERLRGASSPTTRN 138
           S + S S++S +S ++ + ++ +S  S   G+S    S L           G+SS  +  
Sbjct: 453 SSSGSSSSSSSSSSSSSSSSSSSSPSSSSGGESSETSSDLFEGSN-----EGSSSSGSSG 512

Query: 139 ALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLSQDAINRLQLEVFINTDHI 198
           A  E  +  P T         L  A    L      +P GL+++ I+ L +  F      
Sbjct: 513 ARREGRHRAPVTFDESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRSFGE---- 572

Query: 199 INDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHI 256
            ND + T     CS+C+  +T+G+KL  LPC H++H  C+DRW+     CP CR+ +
Sbjct: 573 -NDALKT-----CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAV 614

[Close]

BLAST of CsaV3_7G007960 vs. ExPASy Swiss-Prot
Match: Q7T037 (E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis OX=8355 GN=rnf12-b PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-09
Identity = 28/83 (33.73%), Postives = 48/83 (57.83%), Query Frame = 0


Query: 175 RPPGLSQDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFH 234
           +P GL+++ I+ L        ++  ND + T     CS+C+  +T+G+KL  LPC H++H
Sbjct: 677 QPRGLTKEQIDNLS-----TRNYGENDALKT-----CSVCITEYTEGNKLRKLPCSHEYH 736

Query: 235 HPCLDRWIRTCGECPYCRQHIAI 258
             C+DRW+     CP CR+ + +
Sbjct: 737 IHCIDRWLSENSTCPICRRAVLV 749

[Close]

BLAST of CsaV3_7G007960 vs. ExPASy TrEMBL
Match: A0A0A0K6D2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071510 PE=4 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 2.5e-144
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240
           QDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR
Sbjct: 181 QDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240

Query: 241 WIRTCGECPYCRQHIAIN 259
           WIRTCGECPYCRQHIAIN
Sbjct: 241 WIRTCGECPYCRQHIAIN 258

[Close]

BLAST of CsaV3_7G007960 vs. ExPASy TrEMBL
Match: A0A5A7SMR0 (E3 ubiquitin-protein ligase RLIM OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001110 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 9.7e-136
Identity = 244/256 (95.31%), Postives = 250/256 (97.66%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDR+LQYQRRHHGHN NHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSV SRNNINGNTQNSLRSGLSGDSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPT+RNALVEASNGNPE +TSRSQRISL+DADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240
           QDAINRLQLEVFINTD II+D VMTITSTDCSICLESFTDGDKLIHLPCEHKFHH CLDR
Sbjct: 181 QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR 240

Query: 241 WIRTCGECPYCRQHIA 257
           WIRTCGECPYCRQHI+
Sbjct: 241 WIRTCGECPYCRQHIS 256

[Close]

BLAST of CsaV3_7G007960 vs. ExPASy TrEMBL
Match: A0A1S3C156 (E3 ubiquitin-protein ligase RLIM OS=Cucumis melo OX=3656 GN=LOC103495299 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 9.7e-136
Identity = 244/256 (95.31%), Postives = 250/256 (97.66%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDR+LQYQRRHHGHN NHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSV SRNNINGNTQNSLRSGLSGDSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPT+RNALVEASNGNPE +TSRSQRISL+DADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240
           QDAINRLQLEVFINTD II+D VMTITSTDCSICLESFTDGDKLIHLPCEHKFHH CLDR
Sbjct: 181 QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR 240

Query: 241 WIRTCGECPYCRQHIA 257
           WIRTCGECPYCRQHI+
Sbjct: 241 WIRTCGECPYCRQHIS 256

[Close]

BLAST of CsaV3_7G007960 vs. ExPASy TrEMBL
Match: A0A6J1JIJ3 (probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita maxima OX=3661 GN=LOC111486117 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 3.1e-110
Identity = 205/259 (79.15%), Postives = 223/259 (86.10%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELF+ RRYR GRTD+DLGLDSEPPDRHLQYQRRHHGHNGNHRR LN+CG FRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120
           LQER QSPRF NPL+VDRSPAQS+S  SV SRNNIN N QNSLR GLSGDSRLPGSVLLA
Sbjct: 61  LQERHQSPRFLNPLAVDRSPAQSESGISVGSRNNINANIQNSLRPGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERL ERLRGASSPT RN LVEA + +PE + SRSQ ISL DADR+RLV   SKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINDGV-MTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLD 240
            +AIN LQLE FI+ +HII+D + MT TS DCSICL+SF DGDKLIHLPC+HKFHH CL+
Sbjct: 181 LEAINCLQLERFIDIEHIIDDDLTMTTTSNDCSICLDSFIDGDKLIHLPCKHKFHHACLE 240

Query: 241 RWIRTCGECPYCRQHIAIN 259
            WIRTCGECPYCRQHI +N
Sbjct: 241 PWIRTCGECPYCRQHIVVN 259

[Close]

BLAST of CsaV3_7G007960 vs. ExPASy TrEMBL
Match: A0A6J1D583 (probable E3 ubiquitin-protein ligase RHY1A OS=Momordica charantia OX=3673 GN=LOC111017418 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.5e-107
Identity = 199/260 (76.54%), Postives = 226/260 (86.92%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELF+ RRYR+GRTD+DLGLDSEPPDRHL   RRHHGH G HRRDLN+CG FRRSS
Sbjct: 1   MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGN--TQNSLRSGLSGDSRLPGSVL 120
           LQER QSPRF  PL+ DRS AQSDS TS+ SRN+IN N   +NS R+GLS DSRLPG+VL
Sbjct: 61  LQERHQSPRFSYPLAQDRSAAQSDSVTSLGSRNSINANIHIRNSSRTGLSXDSRLPGAVL 120

Query: 121 LARERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPG 180
           LARERLLERLRGAS PT+RN L EAS+GNPE +TS+SQRISLVDADR++LV   +KRPPG
Sbjct: 121 LARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPG 180

Query: 181 LSQDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCL 240
           LS +A++RLQLEVF+NT+HII+D   TITSTDCSICLESFTDGDKLIHLPCEHKFHH CL
Sbjct: 181 LSXEAVDRLQLEVFMNTEHIIDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACL 240

Query: 241 DRWIRTCGECPYCRQHIAIN 259
           DRW+R+CG+CPYCRQ I +N
Sbjct: 241 DRWVRSCGDCPYCRQRIDVN 260

[Close]

BLAST of CsaV3_7G007960 vs. TAIR 10
Match: AT1G49850.1 (RING/U-box superfamily protein )

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-37
Identity = 100/258 (38.76%), Postives = 139/258 (53.88%), Query Frame = 0


Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHG-HNGNHRRDLNSCGDFRRS 60
           MTSASELF  RR R GR+D  L  D+     H  +  R HG H+ N R D + C   RR 
Sbjct: 1   MTSASELFSTRRSRPGRSDPALESDTSSYRHHSHHHHRRHGVHHHNQRHDSDGCDPLRRP 60

Query: 61  SLQERRQSPRFFNPLSVDRSPAQSDSATS-VASRNNINGNTQNSLRSGLSGDSRLPGSVL 120
           + + RR    F +P+     P +    TS   + ++ +  TQ+S    L+G  RLPG+VL
Sbjct: 61  TPRLRR---FFHHPIQERSRPIRDVQGTSQYLNTDSTDTETQSSSFVNLNGSERLPGAVL 120

Query: 121 LARERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPG 180
           LAR+RL ERLRG S  +   +   + +   E++        +     +++    +K+P G
Sbjct: 121 LARDRLFERLRGVSLSSNSRSNRVSLDDQRESSFHSIDGDPIFQLAGLQVTYECNKKPQG 180

Query: 181 LSQDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCL 240
           L+QDAIN L  + F + +       +     DCSICLESFT GD LI LPC H FH  CL
Sbjct: 181 LTQDAINCLHRQTFSSAE-------VKSEMRDCSICLESFTKGDMLISLPCTHSFHSSCL 240

Query: 241 DRWIRTCGECPYCRQHIA 257
           + W+R CG+CP CR+ IA
Sbjct: 241 NPWLRACGDCPCCRRAIA 248

[Close]

BLAST of CsaV3_7G007960 vs. TAIR 10
Match: AT2G15580.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.6e-11
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 210 DCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHI 256
           DC+ICL+ F  G+ L+HLPC HKFH  CL  W+ T   CPYCR  I
Sbjct: 149 DCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCRTDI 194

[Close]

BLAST of CsaV3_7G007960 vs. TAIR 10
Match: AT5G66070.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 2.1e-10
Identity = 29/79 (36.71%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 178 GLSQDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLP-CEHKFHHP 237
           GL+ D++NR+      +T   I           CS+CL+ F  G+ +  LP C H FH P
Sbjct: 152 GLTGDSLNRIPKVRITDTSPEI---------VSCSVCLQDFQVGETVRSLPHCHHMFHLP 211

Query: 238 CLDRWIRTCGECPYCRQHI 256
           C+D+W+R    CP CR+H+
Sbjct: 212 CIDKWLRRHASCPLCRRHL 221

[Close]

BLAST of CsaV3_7G007960 vs. TAIR 10
Match: AT5G66070.2 (RING/U-box superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 2.1e-10
Identity = 29/79 (36.71%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 178 GLSQDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLP-CEHKFHHP 237
           GL+ D++NR+      +T   I           CS+CL+ F  G+ +  LP C H FH P
Sbjct: 176 GLTGDSLNRIPKVRITDTSPEI---------VSCSVCLQDFQVGETVRSLPHCHHMFHLP 235

Query: 238 CLDRWIRTCGECPYCRQHI 256
           C+D+W+R    CP CR+H+
Sbjct: 236 CIDKWLRRHASCPLCRRHL 245

[Close]

BLAST of CsaV3_7G007960 vs. TAIR 10
Match: AT1G68070.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 62.8 bits (151), Expect = 4.8e-10
Identity = 23/61 (37.70%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 195 TDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQH 254
           ++++ N+ V+     DC ICL S+ DG +L+ LPC H FH  C+ +W++    CP C+ +
Sbjct: 276 SENLGNERVLLPEDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFN 335

Query: 255 I 256
           I
Sbjct: 336 I 336

The following BLAST results are available for this feature:

BLAST of CsaV3_7G007960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136947.1	5.2e-144	100.00	probable E3 ubiquitin-protein ligase RHY1A [Cucumis sativus] >KGN43862.1 hypothe...	[more]
XP_008455026.1	2.0e-135	95.31	PREDICTED: E3 ubiquitin-protein ligase RLIM [Cucumis melo] >KAA0031356.1 E3 ubiq...	[more]
XP_038888994.1	1.8e-120	85.33	probable E3 ubiquitin-protein ligase RHY1A [Benincasa hispida]	[more]
XP_022988901.1	6.5e-110	79.15	probable E3 ubiquitin-protein ligase RHY1A [Cucurbita maxima]	[more]
XP_023529438.1	6.5e-110	79.15	probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_7G007960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q852U6	1.7e-36	38.76	Probable E3 ubiquitin-protein ligase RHY1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q7XLY8	2.1e-10	37.04	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
A5WWA0	4.6e-10	42.86	E3 ubiquitin-protein ligase znrf3 OS=Danio rerio OX=7955 GN=znrf3 PE=1 SV=2	[more]
Q9NVW2	6.1e-10	28.25	E3 ubiquitin-protein ligase RLIM OS=Homo sapiens OX=9606 GN=RLIM PE=1 SV=3	[more]
Q7T037	1.3e-09	33.73	E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis OX=8355 GN=rnf12-b PE=2 SV...	[more]

BLAST of CsaV3_7G007960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6D2	2.5e-144	100.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071510 P...	[more]
A0A5A7SMR0	9.7e-136	95.31	E3 ubiquitin-protein ligase RLIM OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C156	9.7e-136	95.31	E3 ubiquitin-protein ligase RLIM OS=Cucumis melo OX=3656 GN=LOC103495299 PE=4 SV...	[more]
A0A6J1JIJ3	3.1e-110	79.15	probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1D583	1.5e-107	76.54	probable E3 ubiquitin-protein ligase RHY1A OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of CsaV3_7G007960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49850.1	1.2e-37	38.76	RING/U-box superfamily protein	[more]
AT2G15580.1	5.6e-11	56.52	RING/U-box superfamily protein	[more]
AT5G66070.1	2.1e-10	36.71	RING/U-box superfamily protein	[more]
AT5G66070.2	2.1e-10	36.71	RING/U-box superfamily protein	[more]
AT1G68070.1	4.8e-10	37.70	Zinc finger, C3HC4 type (RING finger) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 211..251 e-value: 2.3E-5 score: 33.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 210..252 e-value: 3.6E-13 score: 49.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 211..252 score: 12.946621
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 169..257 e-value: 3.4E-19 score: 70.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..112
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 1..156
None	No IPR available	PANTHER	PTHR45931:SF10	E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATED	coord: 151..257 coord: 1..156
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 151..257
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 210..252 e-value: 3.80453E-16 score: 68.4825
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 210..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G007960.1	CsaV3_7G007960.1	mRNA