
CsaV3_7G007730 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTAATTTCTAAATGCAATTGAATGAACATACTCCACTATCGTCAAAATGCACACAAGTAAAACAAATCTAAAAAGTAAGTTTGATTTTTTACCAAAATAGATGGAGATAGGTGAATAAATCACAAAGTATTAAGCTTTGTTAGAACTTTTGTTATATGTGACCAAGAAAGCCTCATCTCTTGTTCAACCTCATCCTCAAACTCTCCTCCCCATGAGTTCCATTGGCCAAAGCATTCTCATGGCCTTAGCCGTCACTCTCAACAAATTTGCTTCTTCCAACGTTCAATCCGTTCAAAGAAACAAAGCCACCGCCACCGCCACCGTCTCTTCACCAATTGGAAGAAGAAGCCTCCTCTTGTCCACCCTTGCCCCCGCCTCCGCCGCCGCCGCCTCCACGGTCGACTCCAGAACAGAGCTGCTAAAAAGTGGTGCATTCTTCTCTAAACTACCTTTCTTCTTCTTCTTTCATCAATTGTGTGTTTTGTTTTCGAAAAATTGTTATTTGTTCCTTAGTTTTCTTCCCTAAATATTCATTTTCTTCTTCTTCTGAAGTCTGATTTTGGGAGAAGAAGCATCCAACTTAGTTTCATCTGTTTTCTTTTGCTCTTTTCAAGAACATCCCAAATTTATTTATTTAAAAAAAATCATTTCAAATTTATCAAAATTTAATCTTTTCTTTATTTCTATCAATAAATTCGAAATGATTTTTGGTGAATTATTCATCACTTTGCTAATGGGATTCCTGATTTTTTCTTTACAAAATTTGAAATAATTATAATGTACTTGTAATTTTTTAAATAAATAATTATATTAGAATAGTGTTTACTAATATAAAATATTTGTAAGTATTGTTTAATTATAGATAGATTTTTAATAATATGTTTAGTGTTTAATAATAAGTACAATTTCCTGTAATTAGTGGCATTTTCTTTACAAATCAAATTATTATGTGTTTTGTACTTTAGGGTACCTCAAGAAGTCTGAAGAGAACAAAGAAAAGAATGACAAGGAGGTAATTTTTCTTTGGTAATTTACCCTATATTTTCTAATGGATTAAAGATAATGTTACAAAATTAACTTTGTAATTTTAGCAGAGATTGGAAAGTTACTACAAGCGAAATTACAAAGATTATTTTGAGTTTGTGGAAGGATCGGTGAAGAACAAGAACGAACTTTCCGAAGCTGAAAAAGGTATTGTTGAGTGGCTTAAACGAAGTAAATGAATGAGTACGAGAGTATACACTTTTTAGTTTTAGTTTAATTACCATAACTATTATAACAATAGTCTTAATTAATTCATGCCTCTAATTTTATTAATTAATAATTTGCTTCACTTGTAAAATCGTAGTGTGAAAATTAAAATGACAAAGTATTGTGGAATTTTATTTTTCTTTGTTTAGTTCGTTTTTACTAAATGGATCAATTCATAAGTCAAAACCAATATTTGGGAAACTAACATTTTAAATTTGGTCCATTTTGTAAATATTTTAAATCTATGTATATCGTAAATTTTAGAGTTTGTATCGGATTATACTTTTACAAGTGTATCGATTTCGACTGTCAATTACATTTCATTTGGAAAATTTGTATGTGGAACTTATAGTTGTATCAGTTAACCCTCTAATTTTTTATAAATGAATCAATTTAGGCTATGTATAATAATTTGGGAATTGTCCATGCATTTG ATGAGTTCCATTGGCCAAAGCATTCTCATGGCCTTAGCCGTCACTCTCAACAAATTTGCTTCTTCCAACGTTCAATCCGTTCAAAGAAACAAAGCCACCGCCACCGCCACCGTCTCTTCACCAATTGGAAGAAGAAGCCTCCTCTTGTCCACCCTTGCCCCCGCCTCCGCCGCCGCCGCCTCCACGGTCGACTCCAGAACAGAGCTGCTAAAAAGGTACCTCAAGAAGTCTGAAGAGAACAAAGAAAAGAATGACAAGGAGAGATTGGAAAGTTACTACAAGCGAAATTACAAAGATTATTTTGAGTTTGTGGAAGGATCGGTGAAGAACAAGAACGAACTTTCCGAAGCTGAAAAAGGTATTGTTGAGTGGCTTAAACGAAGTAAATGA ATGAGTTCCATTGGCCAAAGCATTCTCATGGCCTTAGCCGTCACTCTCAACAAATTTGCTTCTTCCAACGTTCAATCCGTTCAAAGAAACAAAGCCACCGCCACCGCCACCGTCTCTTCACCAATTGGAAGAAGAAGCCTCCTCTTGTCCACCCTTGCCCCCGCCTCCGCCGCCGCCGCCTCCACGGTCGACTCCAGAACAGAGCTGCTAAAAAGGTACCTCAAGAAGTCTGAAGAGAACAAAGAAAAGAATGACAAGGAGAGATTGGAAAGTTACTACAAGCGAAATTACAAAGATTATTTTGAGTTTGTGGAAGGATCGGTGAAGAACAAGAACGAACTTTCCGAAGCTGAAAAAGGTATTGTTGAGTGGCTTAAACGAAGTAAATGA MSSIGQSILMALAVTLNKFASSNVQSVQRNKATATATVSSPIGRRSLLLSTLAPASAAAASTVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSEAEKGIVEWLKRSK* Homology
BLAST of CsaV3_7G007730 vs. NCBI nr
Match: XP_004136934.1 (uncharacterized protein LOC101214221 [Cucumis sativus] >KAE8645839.1 hypothetical protein Csa_017171 [Cucumis sativus]) HSP 1 Score: 229.2 bits (583), Expect = 2.1e-56 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of CsaV3_7G007730 vs. NCBI nr
Match: XP_008455049.1 (PREDICTED: uncharacterized protein LOC103495319 [Cucumis melo]) HSP 1 Score: 209.5 bits (532), Expect = 1.7e-50 Identity = 122/130 (93.85%), Postives = 125/130 (96.15%), Query Frame = 0
BLAST of CsaV3_7G007730 vs. NCBI nr
Match: XP_038887440.1 (uncharacterized protein LOC120077574 [Benincasa hispida]) HSP 1 Score: 196.4 bits (498), Expect = 1.5e-46 Identity = 113/133 (84.96%), Postives = 118/133 (88.72%), Query Frame = 0
BLAST of CsaV3_7G007730 vs. NCBI nr
Match: XP_022989008.1 (uncharacterized protein LOC111486201 [Cucurbita maxima]) HSP 1 Score: 178.7 bits (452), Expect = 3.2e-41 Identity = 105/134 (78.36%), Postives = 115/134 (85.82%), Query Frame = 0
BLAST of CsaV3_7G007730 vs. NCBI nr
Match: XP_022927848.1 (uncharacterized protein LOC111434615 [Cucurbita moschata]) HSP 1 Score: 173.7 bits (439), Expect = 1.0e-39 Identity = 103/139 (74.10%), Postives = 115/139 (82.73%), Query Frame = 0
BLAST of CsaV3_7G007730 vs. ExPASy TrEMBL
Match: A0A1S3C176 (uncharacterized protein LOC103495319 OS=Cucumis melo OX=3656 GN=LOC103495319 PE=3 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 8.2e-51 Identity = 122/130 (93.85%), Postives = 125/130 (96.15%), Query Frame = 0
BLAST of CsaV3_7G007730 vs. ExPASy TrEMBL
Match: A0A6J1JNZ7 (uncharacterized protein LOC111486201 OS=Cucurbita maxima OX=3661 GN=LOC111486201 PE=3 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.6e-41 Identity = 105/134 (78.36%), Postives = 115/134 (85.82%), Query Frame = 0
BLAST of CsaV3_7G007730 vs. ExPASy TrEMBL
Match: A0A6J1EM63 (uncharacterized protein LOC111434615 OS=Cucurbita moschata OX=3662 GN=LOC111434615 PE=3 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 5.0e-40 Identity = 103/139 (74.10%), Postives = 115/139 (82.73%), Query Frame = 0
BLAST of CsaV3_7G007730 vs. ExPASy TrEMBL
Match: A0A6J1D574 (uncharacterized protein LOC111017388 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017388 PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.9e-39 Identity = 100/129 (77.52%), Postives = 112/129 (86.82%), Query Frame = 0
BLAST of CsaV3_7G007730 vs. ExPASy TrEMBL
Match: A0A2I4HLI8 (uncharacterized protein LOC109019213 OS=Juglans regia OX=51240 GN=LOC109019213 PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.8e-34 Identity = 92/134 (68.66%), Postives = 109/134 (81.34%), Query Frame = 0
BLAST of CsaV3_7G007730 vs. TAIR 10
Match: AT1G49975.1 (INVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 131.3 bits (329), Expect = 5.5e-31 Identity = 80/133 (60.15%), Postives = 103/133 (77.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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