CsaV3_7G006100 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G006100
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7: 3683874 .. 3685628 (-)
RNA-Seq ExpressionCsaV3_7G006100
SyntenyCsaV3_7G006100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAGGCTTTACAAGTTCTGGTGGACTAAATTACTCCTCTTGGAGCTGTGGCTACTTATTACCTCTTCAATAGAAAACGAAATAGATTTCATGATGATGATGGACACACACAACATTCTGGTGAGTCTGATACTTTTATGCACTCATGGCTTCGGAGTGATGATATGGTGATTTCTTGAAATCTAAATTTGAATTTTTTGGCAATTTTTTTCTCTCTTTTTTATGAATAACTAAAAGATGAAAGGGCAATTACAAAAGTACTTTGTCATCGAAGCCCATAGAGAAACACATAACCTCACAAAAGACCTTACATTGCTCGAAGATCTTGTTAGCTCTTCAAAAATTATTTTGTTCCTTTCTCTCAAAAGTCCCCACAAGGTCGCTCACATTCCCAAGACTTTCTTTTTTCGTGAAAGATTGGATGGAGAAGGAATTCCTCAAACATCTTTTGCAACCCCTATGCCTAGCCAAACCAAGACCAAAGGATGCAACAGCACGACCCCCCATTATGGGTGCCTTCCTCATCACCCTGCTCAACTTGTTAACTCTTCCGTGGAGCTCCAACCAAATGAAGAGCTTAACTTTAAATTACATACCCGGTTCTTATGGTTCGGATGAAGTTCTAATTTACTCCTTAACTAGAAAAACTACTAACCTTGACACATCATGACGATGTAGAAGAGATTAGGAAGCATTCAAAATAAAACTACAAGTTTATCAAGACTAAATTGATAGAAGAAAATAGGTTGTGCCTGCTGAAATCCTCTCCATCTCCTCCATTCTTTTCTTGTTTTTCAAATCCTAAGATCTGACGTGAATATATAGGAAATTGGGGTGGCGTTGAGGCATCTTTTCGCAGGGATGCACATGCACGCACAAAAAGGTGATGGCACCATGACACTACCACAAAATCATGCCTTATATCTCTAGCATTGCACGACAATGGGGCGCTGCACTGTGGGGCATTTTTGTCATTTGGCTCCTTTTGTTGCTATTTGTTCTATTTTTAGCCCAACTTGTTCTAGGACGTCCCGAGAGTCTCCTTTGCTCTATTTCCTTTCTAAGAACACATTTAAGCATTAAATTCATAAGAAAAAGCTTGATTTAGGCAGCTCCTTTTTTTTAAAAAAAAAAACAGCTCTCTTAGAGAGCTATCATCCACAAATGATTTCTTATCGAAGATAAATGGTATGGAGGAAGAAATACAGAGTAGAGGGGTCTTTATAATTCTAACTTATTCGACTAGCTCTCATTTAGGTAGTTTTTAAAAAGTTAAAGATTGTTGGGGAAGGGATGGACAACTAGATTGCTTTTCTTGGCACACTGCATATTTCGTGTAATGTGATCTTTATCTCATTACTATCAGGCTGAATACATTATATTTTTCCCGATGGAACTAGTGTGCATACCCCATCTCTTGTGTATCCAACCCTTCTCATTATCCTAGTATTTTCTCATGTTGTAAAAAACATCAGCATAATGTTATAGTCGTCAACCATTGTGATTAGTCAAATTAGTGCGTGAACTAATACTAATTTCCTTGATACAGACGGAGAAAGTCATGCACATATTGTGGTGCATCTGTGCACGTGGTTGATAAGTATTATAAAGTTGCATGGATATCCTTCTGGTCAAACAGTGAAACAATTCCTGAGGCATCCTTTCTCTCACTTTGAGAGTAGTCGAGATTTTCGTTTCACAGTAGTTAAAAATGTTTTGGAAATTCTAGCTTCTGCTGCCATGGCTGATTGA

mRNA sequence

ATGATTAGGCTTTACAAGTTCTGGTGGACTAAATTACTCCTCTTGGAGCTGTGGCTACTTATTACCTCTTCAATAGAAAACGAAATAGATTTCATGATGATGATGGACACACACAACATTCTGGAAATTGGGGTGGCGTTGAGGCATCTTTTCGCAGGGATGCACATGCACGCACAAAAAGACGGAGAAAGTCATGCACATATTGTGGTGCATCTGTGCACGTGGTTGATAAGTATTATAAAGTTGCATGGATATCCTTCTGGTCAAACAGTGAAACAATTCCTGAGGCATCCTTTCTCTCACTTTGAGAGTAGTCGAGATTTTCGTTTCACAGTAGTTAAAAATGTTTTGGAAATTCTAGCTTCTGCTGCCATGGCTGATTGA

Coding sequence (CDS)

ATGATTAGGCTTTACAAGTTCTGGTGGACTAAATTACTCCTCTTGGAGCTGTGGCTACTTATTACCTCTTCAATAGAAAACGAAATAGATTTCATGATGATGATGGACACACACAACATTCTGGAAATTGGGGTGGCGTTGAGGCATCTTTTCGCAGGGATGCACATGCACGCACAAAAAGACGGAGAAAGTCATGCACATATTGTGGTGCATCTGTGCACGTGGTTGATAAGTATTATAAAGTTGCATGGATATCCTTCTGGTCAAACAGTGAAACAATTCCTGAGGCATCCTTTCTCTCACTTTGAGAGTAGTCGAGATTTTCGTTTCACAGTAGTTAAAAATGTTTTGGAAATTCTAGCTTCTGCTGCCATGGCTGATTGA

Protein sequence

MIRLYKFWWTKLLLLELWLLITSSIENEIDFMMMMDTHNILEIGVALRHLFAGMHMHAQKDGESHAHIVVHLCTWLISIIKLHGYPSGQTVKQFLRHPFSHFESSRDFRFTVVKNVLEILASAAMAD*
Homology
[Close]
BLAST of CsaV3_7G006100 vs. NCBI nr
Match: KGN43669.1 (hypothetical protein Csa_017262 [Cucumis sativus])

HSP 1 Score: 258.8 bits (660), Expect = 2.4e-65
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 

Query: 1   MIRLYKFWWTKLLLLELWLLITSSIENEIDFMMMMDTHNILEIGVALRHLFAGMHMHAQK 60
           MIRLYKFWWTKLLLLELWLLITSSIENEIDFMMMMDTHNILEIGVALRHLFAGMHMHAQK
Sbjct: 1   MIRLYKFWWTKLLLLELWLLITSSIENEIDFMMMMDTHNILEIGVALRHLFAGMHMHAQK 60

Query: 61  DGESHAHIVVHLCTWLISIIKLHGYPSGQTVKQFLRHPFSHFESSRDFRFTVVKNVLEIL 120
           DGESHAHIVVHLCTWLISIIKLHGYPSGQTVKQFLRHPFSHFESSRDFRFTVVKNVLEIL
Sbjct: 61  DGESHAHIVVHLCTWLISIIKLHGYPSGQTVKQFLRHPFSHFESSRDFRFTVVKNVLEIL 120

Query: 121 ASAAMAD 128
           ASAAMAD
Sbjct: 121 ASAAMAD 127

[Close]
BLAST of CsaV3_7G006100 vs. ExPASy TrEMBL
Match: A0A0A0K3W4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G056480 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.2e-65
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 

Query: 1   MIRLYKFWWTKLLLLELWLLITSSIENEIDFMMMMDTHNILEIGVALRHLFAGMHMHAQK 60
           MIRLYKFWWTKLLLLELWLLITSSIENEIDFMMMMDTHNILEIGVALRHLFAGMHMHAQK
Sbjct: 1   MIRLYKFWWTKLLLLELWLLITSSIENEIDFMMMMDTHNILEIGVALRHLFAGMHMHAQK 60

Query: 61  DGESHAHIVVHLCTWLISIIKLHGYPSGQTVKQFLRHPFSHFESSRDFRFTVVKNVLEIL 120
           DGESHAHIVVHLCTWLISIIKLHGYPSGQTVKQFLRHPFSHFESSRDFRFTVVKNVLEIL
Sbjct: 61  DGESHAHIVVHLCTWLISIIKLHGYPSGQTVKQFLRHPFSHFESSRDFRFTVVKNVLEIL 120

Query: 121 ASAAMAD 128
           ASAAMAD
Sbjct: 121 ASAAMAD 127

The following BLAST results are available for this feature:
BLAST of CsaV3_7G006100 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43669.12.4e-65100.00hypothetical protein Csa_017262 [Cucumis sativus][more]
BLAST of CsaV3_7G006100 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G006100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3W41.2e-65100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G056480 PE=4 SV=1[more]
BLAST of CsaV3_7G006100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G006100.1CsaV3_7G006100.1mRNA