Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTATCAGGTGGAGGTGGGGAAATCGGAATAGTGTCAGGCGGAGGTGGAGAAGTTGGAATAACGTCAGGTGGAGGTGGGGAAGCCGGAGTAGCGTCAGGTGGAGGTGGGGAAGCTGAAGTAGCGTCAGACGGAGGCGGAAAAGCAGGAATCGAATTTTGGGGTGGTGGGTTTGGATTAGAATACGATGGGTTGGGTGGGTTCTGTGGCTGA mRNA sequence ATGGTATCAGGTGGAGGTGGGGAAATCGGAATAGTGTCAGGCGGAGGTGGAGAAGTTGGAATAACGTCAGGTGGAGGTGGGGAAGCCGGAGTAGCGTCAGGTGGAGGTGGGGAAGCTGAAGTAGCGTCAGACGGAGGCGGAAAAGCAGGAATCGAATTTTGGGGTGGTGGGTTTGGATTAGAATACGATGGGTTGGGTGGGTTCTGTGGCTGA Coding sequence (CDS) ATGGTATCAGGTGGAGGTGGGGAAATCGGAATAGTGTCAGGCGGAGGTGGAGAAGTTGGAATAACGTCAGGTGGAGGTGGGGAAGCCGGAGTAGCGTCAGGTGGAGGTGGGGAAGCTGAAGTAGCGTCAGACGGAGGCGGAAAAGCAGGAATCGAATTTTGGGGTGGTGGGTTTGGATTAGAATACGATGGGTTGGGTGGGTTCTGTGGCTGA Protein sequence MVSGGGGEIGIVSGGGGEVGITSGGGGEAGVASGGGGEAEVASDGGGKAGIEFWGGGFGLEYDGLGGFCG*
Homology
BLAST of CsaV3_7G003830 vs. NCBI nr
Match: KAE8645748.1 (hypothetical protein Csa_020199 [Cucumis sativus]) HSP 1 Score: 119.8 bits (299), Expect = 9.7e-24 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
Query: 1 MVSGGGGEIGIVSGGGGEVGITSGGGGEAGVASGGGGEAEVASDGGGKAGIEFWGGGFGL 60
MVSGGGGEIGIVSGGGGEVGITSGGGGEAGVASGGGGEAEVASDGGGKAGIEFWGGGFGL
Sbjct: 1 MVSGGGGEIGIVSGGGGEVGITSGGGGEAGVASGGGGEAEVASDGGGKAGIEFWGGGFGL 60
Query: 61 EYDGLGGFCG 71
EYDGLGGFCG
Sbjct: 61 EYDGLGGFCG 70
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAE8645748.1 | 9.7e-24 | 100.00 | hypothetical protein Csa_020199 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 20..44 |
Relationships
The following mRNA feature(s) are a part of this gene:
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