|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGACTATCCTGAATATCCTTGTTAGGGGTTGTCGTGGTGATGATGAAAACCTTTCTGTTGAGGGAGGTGTGTTCCGTGACGGGGTTGGCTCCCCTTTAGATGGAAACCTTTATGGAAAGCTATATGGAAACTTGAGGTGCCCCTAAGGGTGAACGCTGTCTCCGACTCCCTACCTTTGCCATAATTTGTAAAAAAATGGAATCTCTATTAACCCGCTTTGTTTTCTTTGTAGGAAATGTTTTATGGGCTGCGATGCAAGTTTTGTAGAAGCATTTGATTATTATTCTTCCCTTCCTTATTTGGGCTTTTTGGCGATTTCAAGAATTGTTGGAGTCTGTCGAACTGCTGATATAGGGTGGTTTCTACGACCGAGGTGCGTAACAGGGTTTGCGGCTATCCTACTGTGGGATGTGTGGAATTACGGAAATGTGGTGAAGCGTTGCGGGTTCGAGCCTGATCGTGATGCTCTGTTGAGAAGAATCTTCTTTACACTTGAAGGGAGATGGGGCTCCATTTTCGCTTAG mRNA sequence ATGACTATCCTGAATATCCTTGTTAGGGGTTGTCGTGGTGATGATGAAAACCTTTCTGTTGAGGGAGGTGTGTTCCGTGACGGGGTTGGCTCCCCTTTAGATGGAAACCTTTATGGAAAGCTATATGGAAACTTGAGGAAATGTTTTATGGGCTGCGATGCAAGTTTTGTAGAAGCATTTGATTATTATTCTTCCCTTCCTTATTTGGGCTTTTTGGCGATTTCAAGAATTGTTGGAGTCTGTCGAACTGCTGATATAGGGTGGTTTCTACGACCGAGGTGCGTAACAGGGTTTGCGGCTATCCTACTGTGGGATGTGTGGAATTACGGAAATGTGGTGAAGCGTTGCGGGTTCGAGCCTGATCGTGATGCTCTGTTGAGAAGAATCTTCTTTACACTTGAAGGGAGATGGGGCTCCATTTTCGCTTAG Coding sequence (CDS) ATGACTATCCTGAATATCCTTGTTAGGGGTTGTCGTGGTGATGATGAAAACCTTTCTGTTGAGGGAGGTGTGTTCCGTGACGGGGTTGGCTCCCCTTTAGATGGAAACCTTTATGGAAAGCTATATGGAAACTTGAGGAAATGTTTTATGGGCTGCGATGCAAGTTTTGTAGAAGCATTTGATTATTATTCTTCCCTTCCTTATTTGGGCTTTTTGGCGATTTCAAGAATTGTTGGAGTCTGTCGAACTGCTGATATAGGGTGGTTTCTACGACCGAGGTGCGTAACAGGGTTTGCGGCTATCCTACTGTGGGATGTGTGGAATTACGGAAATGTGGTGAAGCGTTGCGGGTTCGAGCCTGATCGTGATGCTCTGTTGAGAAGAATCTTCTTTACACTTGAAGGGAGATGGGGCTCCATTTTCGCTTAG Protein sequence MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFVEAFDYYSSLPYLGFLAISRIVGVCRTADIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEPDRDALLRRIFFTLEGRWGSIFA*
Homology
BLAST of CsaV3_7G003070 vs. NCBI nr
Match: XP_011658683.1 (uncharacterized protein LOC105436073 [Cucumis sativus] >KGN43467.1 hypothetical protein Csa_020272 [Cucumis sativus]) HSP 1 Score: 308.9 bits (790), Expect = 2.3e-80 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFVEAF 60
MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFVEAF
Sbjct: 1 MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFVEAF 60
Query: 61 DYYSSLPYLGFLAISRIVGVCRTADIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP 120
DYYSSLPYLGFLAISRIVGVCRTADIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP
Sbjct: 61 DYYSSLPYLGFLAISRIVGVCRTADIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP 120
Query: 121 DRDALLRRIFFTLEGRWGSIFA 143
DRDALLRRIFFTLEGRWGSIFA
Sbjct: 121 DRDALLRRIFFTLEGRWGSIFA 142
BLAST of CsaV3_7G003070 vs. ExPASy TrEMBL
Match: A0A0A0K5B7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G038180 PE=4 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 1.1e-80 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFVEAF 60
MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFVEAF
Sbjct: 1 MTILNILVRGCRGDDENLSVEGGVFRDGVGSPLDGNLYGKLYGNLRKCFMGCDASFVEAF 60
Query: 61 DYYSSLPYLGFLAISRIVGVCRTADIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP 120
DYYSSLPYLGFLAISRIVGVCRTADIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP
Sbjct: 61 DYYSSLPYLGFLAISRIVGVCRTADIGWFLRPRCVTGFAAILLWDVWNYGNVVKRCGFEP 120
Query: 121 DRDALLRRIFFTLEGRWGSIFA 143
DRDALLRRIFFTLEGRWGSIFA
Sbjct: 121 DRDALLRRIFFTLEGRWGSIFA 142
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_011658683.1 | 2.3e-80 | 100.00 | uncharacterized protein LOC105436073 [Cucumis sativus] >KGN43467.1 hypothetical ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K5B7 | 1.1e-80 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G038180 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
|
