CsaV3_7G001450 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G001450
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	signal recognition particle 43 kDa protein, chloroplastic
Location	chr7: 1263565 .. 1265194 (+)
RNA-Seq Expression	CsaV3_7G001450
Synteny	CsaV3_7G001450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAGATATAAAGAAAAGTTTGATGTAAAAAAGAAATCCTTGAACTAAATTGATATGAATGAAAATGTAGGAATAAAACGGAAACTAAACCTTGAACTAAAAAAGTGTTAAAAATTAGTTAAAACTTGTAATTTGAATGGATGTAGAACTTAATTGAATCTTCCATTCACTTAGTTTGTTGATTCATTTGGTTAAAACAAGTGTTCAATAAACTAAATCGAATTCAAAGTTGAGAGCTGTGAAATAAACCAAAAAAACAACACACTAACAAAGTGTAGAAAATTTCTCTAACTAAAACGACAGCCATGGATTCCATCCATTTCCTTATCCATAATTTCCTCTTATCTCAGATTTTCCATACCCCACCTTCTGTAAACGACACCGTTCCTCCCTCTCCAACCCCTTCTTCCACTTCCCTTCTCCTCCTCCTCCTCCTCCTCCTTCACAACCGCATCCACACATTCCTCCATGGAAGCCGTCTTCCTCAATCAATCTCTCTCTCGCCTTAAACTTCCCCCTAAAACCCCTCTCCCTTTCCCCTCTCCAATCCCCCATCTCAATCTCCGCCGCAACTTTACTCATTTCACCGCTTACGCCGTTCAAAGCGACCAACCCATCACGCAACAAACCCAAAAGCCAGAAGACGACGAATCCTACGGCGAAGTCGATGGCATCATCGGCAGCCGTGCTCTGCCCGACGCTACTGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCCCCTTCATGGGTTCCTTCTGATTTCATCGCCAAAGATGTTGTAGCCGAGTACGAAACTCCCTGGTGGACCGCCGCAAAGAAAGCCGATGAATCCGCTCTCAAATCGCTTATAGATTCTGGTGATGAACGCGATTTCGATGCGGTGGATGAAGATGGGAGAACCGCTCTTCTGTTTGTATCGGGGCTTGGGTCTGTGGAATGTGTGAGAATATTGGCGGACGCCGGAGTGAATCTTAACCACCGTGATAACAGCGGTGGGTTTACAGCTTTGCATATGGCGGCAGGGTATGTGAAACCAGAGACGGTGGAGTTGTTGGTGGAATTGGGGGCGGATCCGGAGATTGACGATGAGAAGGGAAGGACGGCATTGGAGTTAGCGAAGGAGATACTGAAAGCGACGCCGAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAAGGTGATTAGAGCGGTGGAGAAGGTGGTATATGAGTACGCGGAGGTGGAGGAATTGCTGGAGAAGAGAGGGAAAGGGGAGAATTTGGAGTACTTGGTGAAATGGAAAGATGGAGAGGATAATGAGTGGGTGAAAGTGGGGTTGATTGCGGAGGACTTGGTGGGAGATTATGAAGCAGGGTTGGAATATGCGGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGGGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGACGCCACGTGGGAGCCTTTGGATAATGTGGATCCGGATTTGATTAACGAGTTTGAGAAGGCCCAGGCCCAATCCAGTAATTGGTAGCGCCCTTTGACAAACCCTTTCCTCCCCAAGTATGTATTTAAACTAGAGATTTTTTTCTTCTAATATTGGAAAAATCTTAAAAAAAGAAAGAAA

mRNA sequence

ATGGAAGCCGTCTTCCTCAATCAATCTCTCTCTCGCCTTAAACTTCCCCCTAAAACCCCTCTCCCTTTCCCCTCTCCAATCCCCCATCTCAATCTCCGCCGCAACTTTACTCATTTCACCGCTTACGCCGTTCAAAGCGACCAACCCATCACGCAACAAACCCAAAAGCCAGAAGACGACGAATCCTACGGCGAAGTCGATGGCATCATCGGCAGCCGTGCTCTGCCCGACGCTACTGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCCCCTTCATGGGTTCCTTCTGATTTCATCGCCAAAGATGTTGTAGCCGAGTACGAAACTCCCTGGTGGACCGCCGCAAAGAAAGCCGATGAATCCGCTCTCAAATCGCTTATAGATTCTGGTGATGAACGCGATTTCGATGCGGTGGATGAAGATGGGAGAACCGCTCTTCTGTTTGTATCGGGGCTTGGGTCTGTGGAATGTGTGAGAATATTGGCGGACGCCGGAGTGAATCTTAACCACCGTGATAACAGCGGTGGGTTTACAGCTTTGCATATGGCGGCAGGGTATGTGAAACCAGAGACGGTGGAGTTGTTGGTGGAATTGGGGGCGGATCCGGAGATTGACGATGAGAAGGGAAGGACGGCATTGGAGTTAGCGAAGGAGATACTGAAAGCGACGCCGAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAAGGTGATTAGAGCGGTGGAGAAGAGAGGGAAAGGGGAGAATTTGGAGTACTTGGTGAAATGGAAAGATGGAGAGGATAATGAGTGGGTGAAAGTGGGGTTGATTGCGGAGGACTTGGTGGGAGATTATGAAGCAGGGTTGGAATATGCGGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGGGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGACGCCACGTGGGAGCCTTTGGATAATGTGGATCCGGATTTGATTAACGAGTTTGAGAAGGCCCAGGCCCAATCCAGTAATTGGTAG

Coding sequence (CDS)

ATGGAAGCCGTCTTCCTCAATCAATCTCTCTCTCGCCTTAAACTTCCCCCTAAAACCCCTCTCCCTTTCCCCTCTCCAATCCCCCATCTCAATCTCCGCCGCAACTTTACTCATTTCACCGCTTACGCCGTTCAAAGCGACCAACCCATCACGCAACAAACCCAAAAGCCAGAAGACGACGAATCCTACGGCGAAGTCGATGGCATCATCGGCAGCCGTGCTCTGCCCGACGCTACTGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCCCCTTCATGGGTTCCTTCTGATTTCATCGCCAAAGATGTTGTAGCCGAGTACGAAACTCCCTGGTGGACCGCCGCAAAGAAAGCCGATGAATCCGCTCTCAAATCGCTTATAGATTCTGGTGATGAACGCGATTTCGATGCGGTGGATGAAGATGGGAGAACCGCTCTTCTGTTTGTATCGGGGCTTGGGTCTGTGGAATGTGTGAGAATATTGGCGGACGCCGGAGTGAATCTTAACCACCGTGATAACAGCGGTGGGTTTACAGCTTTGCATATGGCGGCAGGGTATGTGAAACCAGAGACGGTGGAGTTGTTGGTGGAATTGGGGGCGGATCCGGAGATTGACGATGAGAAGGGAAGGACGGCATTGGAGTTAGCGAAGGAGATACTGAAAGCGACGCCGAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAAGGTGATTAGAGCGGTGGAGAAGAGAGGGAAAGGGGAGAATTTGGAGTACTTGGTGAAATGGAAAGATGGAGAGGATAATGAGTGGGTGAAAGTGGGGTTGATTGCGGAGGACTTGGTGGGAGATTATGAAGCAGGGTTGGAATATGCGGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGGGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGACGCCACGTGGGAGCCTTTGGATAATGTGGATCCGGATTTGATTAACGAGTTTGAGAAGGCCCAGGCCCAATCCAGTAATTGGTAG

Protein sequence

MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSNW*

Homology

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BLAST of CsaV3_7G001450 vs. NCBI nr
Match: KAE8645681.1 (hypothetical protein Csa_020568 [Cucumis sativus])

HSP 1 Score: 692.6 bits (1786), Expect = 1.7e-195
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDD 60
           MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDD
Sbjct: 1   MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDD 60

Query: 61  ESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKA 120
           ESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKA
Sbjct: 61  ESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKA 120

Query: 121 DESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFT 180
           DESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFT
Sbjct: 121 DESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFT 180

Query: 181 ALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVI 240
           ALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVI
Sbjct: 181 ALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVI 240

Query: 241 RAVEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEYAVAEAVVGKRVGDD 300
           RAVEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEYAVAEAVVGKRVGDD
Sbjct: 241 RAVEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEYAVAEAVVGKRVGDD 300

Query: 301 GKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSNW 342
           GKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSNW
Sbjct: 301 GKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSNW 341

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BLAST of CsaV3_7G001450 vs. NCBI nr
Match: XP_004153574.1 (signal recognition particle 43 kDa protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 682.9 bits (1761), Expect = 1.4e-192
Identity = 341/355 (96.06%), Postives = 341/355 (96.06%), Query Frame = 0


Query: 1   MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDD 60
           MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDD
Sbjct: 1   MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDD 60

Query: 61  ESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKA 120
           ESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKA
Sbjct: 61  ESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKA 120

Query: 121 DESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFT 180
           DESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFT
Sbjct: 121 DESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFT 180

Query: 181 ALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVI 240
           ALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVI
Sbjct: 181 ALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVI 240

Query: 241 RAV--------------EKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEY 300
           RAV              EKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEY
Sbjct: 241 RAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEY 300

Query: 301 AVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSNW 342
           AVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSNW
Sbjct: 301 AVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSNW 355

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BLAST of CsaV3_7G001450 vs. NCBI nr
Match: XP_008447899.1 (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis melo])

HSP 1 Score: 647.1 bits (1668), Expect = 8.4e-182
Identity = 327/356 (91.85%), Postives = 333/356 (93.54%), Query Frame = 0


Query: 1   MEAVFLNQSLSRLKLPPKTPL----PFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQK 60
           MEAVFLNQSLSRLKLPPK PL    PFPS IPHLNLRRNFTHFTAYAVQSDQPITQQT K
Sbjct: 1   MEAVFLNQSLSRLKLPPKPPLPLPIPFPSTIPHLNLRRNFTHFTAYAVQSDQPITQQTYK 60

Query: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120
           PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA
Sbjct: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120

Query: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNS 180
           AKKAD+SAL+SLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILA+AGVNLNHRDNS
Sbjct: 121 AKKADKSALESLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILAEAGVNLNHRDNS 180

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGL 240
           GGFTALHMAAGYVKPETVELLVELGADPEI+DEKGRTALELAKEILKATPRVQFMRRLGL
Sbjct: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGL 240

Query: 241 EKVIRAV--------------EKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEA 300
           EKVI AV              EKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV DYEA
Sbjct: 241 EKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADYEA 300

Query: 301 GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQS 339
           GLEYAVAEAVVGKRVGD+GKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ+
Sbjct: 301 GLEYAVAEAVVGKRVGDEGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQA 356

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BLAST of CsaV3_7G001450 vs. NCBI nr
Match: XP_038888741.1 (signal recognition particle 43 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 604.4 bits (1557), Expect = 6.2e-169
Identity = 306/355 (86.20%), Postives = 319/355 (89.86%), Query Frame = 0


Query: 1   MEAVFLNQSLSRLKLPPKTPLPFP----SPIPHLNLRRNFTHFTAYAVQSDQPITQQTQK 60
           M+AVF+NQSLSRLKL PK PLPFP    S  PHLNLRRNF HFT YAVQSDQP+TQQTQK
Sbjct: 1   MDAVFVNQSLSRLKLSPKPPLPFPPSSSSRNPHLNLRRNFKHFTPYAVQSDQPLTQQTQK 60

Query: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120
            EDDESYGEVDGIIGSRAL DATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA
Sbjct: 61  SEDDESYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120

Query: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNS 180
           AKKADESALKSLID+GD RDFDAVDEDGRTALLFV+GLGS  CVR+LA+AGVNL+HRDNS
Sbjct: 121 AKKADESALKSLIDAGDGRDFDAVDEDGRTALLFVAGLGSNPCVRMLAEAGVNLDHRDNS 180

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGL 240
           GGFTALH+AAGYVKPETVELLVELGADPEI+DEKGRT L LAKEILKATPRVQFMRR+GL
Sbjct: 181 GGFTALHLAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAKEILKATPRVQFMRRIGL 240

Query: 241 EKVIRAV--------------EKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEA 300
           E+VI AV              EKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV D+EA
Sbjct: 241 ERVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA 300

Query: 301 GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ 338
           GLEYAVAEAVVGKR GDDGKMEYLVKWTDIQDATWEP DNVDPDLI EFEKAQAQ
Sbjct: 301 GLEYAVAEAVVGKRFGDDGKMEYLVKWTDIQDATWEPQDNVDPDLIAEFEKAQAQ 355

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BLAST of CsaV3_7G001450 vs. NCBI nr
Match: KAG6589032.1 (Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 552.7 bits (1423), Expect = 2.1e-153
Identity = 281/354 (79.38%), Postives = 305/354 (86.16%), Query Frame = 0


Query: 1   MEAVFLNQSLSRLKLPPKTPLP-FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQK--- 60
           M+AVF+NQSLSRLKLPPK PLP  PSPI HL+LRR F  FTAYAV  ++P+TQQTQ+   
Sbjct: 1   MDAVFVNQSLSRLKLPPKPPLPKLPSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQPDN 60

Query: 61  -PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT 120
            PEDDESYGEVDGIIGSRAL DATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT
Sbjct: 61  FPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT 120

Query: 121 AAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDN 180
           AAKKADESALKSLID+ D RDF+AVDEDGRTALLFV+GLGS  C+RILA+AG +L+HRD 
Sbjct: 121 AAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDK 180

Query: 181 SGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLG 240
           SGGFTALHMAAGYVKP TVELL+ELGADPE+ D+KGRT L LA+EI+KATPRVQF RRLG
Sbjct: 181 SGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLG 240

Query: 241 LEKVIRA--------------VEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYE 300
           LE+VI A              +EKRGKGENLEYLVKWKDGEDNEWVK  LIAEDLV D+E
Sbjct: 241 LERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFE 300

Query: 301 AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ 336
           AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDI+DATWEP  NVD DL+ EFE  Q
Sbjct: 301 AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEGNVDSDLVTEFETGQ 352

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BLAST of CsaV3_7G001450 vs. ExPASy Swiss-Prot
Match: O22265 (Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAO PE=1 SV=2)

HSP 1 Score: 388.3 bits (996), Expect = 9.2e-107
Identity = 214/362 (59.12%), Postives = 262/362 (72.38%), Query Frame = 0


Query: 3   AVFLNQSLSRLKL-PPKTPLP-----FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQT-- 62
           A+ ++QSLSR+KL PPK+         P  +P   +   F      AVQ +   T  +  
Sbjct: 12  ALVIHQSLSRIKLSPPKSSSSSSSAFSPESLPIRRIELCFRGAICAAVQRNYEETTSSVE 71

Query: 63  QKPEDDE---SYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYET 122
           +  EDDE   SYGEV+ IIGSR   +   MEYLI+WKDGHSPSWVPS +IA DVV+EYET
Sbjct: 72  EAEEDDESSSSYGEVNKIIGSRTAGEG-AMEYLIEWKDGHSPSWVPSSYIAADVVSEYET 131

Query: 123 PWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLN 182
           PWWTAA+KADE AL  L+   ++RD DAVDE+GRTALLFV+GLGS +CVR+LA+AG +L+
Sbjct: 132 PWWTAARKADEQALSQLL---EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD 191

Query: 183 HRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPR---V 242
           HRD  GG TALHMAAGYV+PE VE LVELGAD E++DE+G TALELA+EILK TP+   +
Sbjct: 192 HRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPM 251

Query: 243 QFMRRLGLEKVIRA--------------VEKRGKGENLEYLVKWKDGEDNEWVKVGLIAE 302
           QF RR+GLEKVI                VEKRGKG+++EYLV+WKDG D EWVK   +AE
Sbjct: 252 QFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAE 311

Query: 303 DLVGDYEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIQDATWEPLDNVDPDLINEFEK 336
           D+  DYE GLEYAVAE+V+GKRVGDDGK +EYLVKWTD+ DATWEP DNVD  L+  +++
Sbjct: 312 DVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLVLLYQQ 369

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BLAST of CsaV3_7G001450 vs. ExPASy Swiss-Prot
Match: Q8LSQ2 (Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0131900 PE=2 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.1e-86
Identity = 184/379 (48.55%), Postives = 239/379 (63.06%), Query Frame = 0


Query: 1   MEAVFLNQSLSRLKLP----PKTP-----LPFPSPIPHLNLRRNFTHFTAYAVQSDQ--P 60
           MEAV  + SLSRLK P     +TP     +PF   +P+  L       TA AV  DQ  P
Sbjct: 1   MEAVLRHPSLSRLKPPNPNAQRTPALSITVPFRLRLPNRRL-------TAAAVFQDQTNP 60

Query: 61  ITQQTQKPEDDESYGEVDGIIGSRALPD-----------ATGMEYLIKWKDGHSPSWVPS 120
               ++  +DDE+YGEVD I+ SR + +            T  EYL++WKDGH PSW+P+
Sbjct: 61  RNPASKGGDDDEAYGEVDRIVSSRTIKNPVFAEDGSATTVTATEYLVEWKDGHEPSWIPA 120

Query: 121 DFIAKDVVAEYETPWWTAAKKADESALKSLI-DSGDERDFDAVDEDGRTALLFVSGLGSV 180
           + IA DVVAEYETPWWTAAKKAD + + +L+ D    RD DA D  GRTA+ F +GLGS 
Sbjct: 121 EAIAADVVAEYETPWWTAAKKADAAEITALLADETLRRDPDAEDAQGRTAMHFAAGLGSE 180

Query: 181 ECVRILADAGVNLNHRDNS-GGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALE 240
           ECVR LA+AG ++   + + GG T LH+A GY +P  V  L+ELGA+PE  D +GRT LE
Sbjct: 181 ECVRALAEAGADVGRPERAGGGLTPLHIAVGYGRPAAVRALLELGAEPEAPDGQGRTPLE 240

Query: 241 LAKEILKATPR---VQFMRRLGLEKVIRAVEK--------------RGKGENLEYLVKWK 300
           L +++L  TP+     F RRL LE   + +EK              RG+G+  EYLV+W+
Sbjct: 241 LVQDVLAKTPKGNPATFERRLALEAAAKELEKAVYEWGEVEKVVDGRGEGKWREYLVEWR 300

Query: 301 DGEDNEWVKVGLIAEDLVGDYEAGLEYAVAEAVVGKR--VGDDGKMEYLVKWTDIQDATW 337
           DG D EWV+   +AEDLV D++AGLEYAVAEAVV KR     +GK EYLVKW DI++ATW
Sbjct: 301 DGGDREWVRAAWVAEDLVKDFDAGLEYAVAEAVVNKREAAEGEGKWEYLVKWVDIEEATW 360

[Close]

BLAST of CsaV3_7G001450 vs. ExPASy Swiss-Prot
Match: Q9SAR5 (Ankyrin repeat domain-containing protein 2A OS=Arabidopsis thaliana OX=3702 GN=AKR2A PE=1 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 7.2e-11
Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 117 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNS 176
           A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C ++L DAG ++N  D +
Sbjct: 226 ASLGDVEGLKAALASGGNKDEE--DSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 285

Query: 177 GGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAK-----EILKATPRVQFM 232
              T LH AAGY + E V LL+E GA   + +   +T +++AK     E++K   +  F+
Sbjct: 286 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEKDAFL 342

[Close]

BLAST of CsaV3_7G001450 vs. ExPASy Swiss-Prot
Match: V6CLA2 (E3 ubiquitin-protein ligase hecd-1 OS=Caenorhabditis elegans OX=6239 GN=hecd-1 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 7.2e-11
Identity = 43/127 (33.86%), Postives = 72/127 (56.69%), Query Frame = 0


Query: 94  SWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSG 153
           S V  D+ A             A ++ D +AL   I+SG + D +  D+ G++   + S 
Sbjct: 326 SVVSGDYAAGSGAERVHRQLIDAIRQKDLTALVDAIESG-QVDVNFADDVGQSLTNWASA 385

Query: 154 LGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRT 213
            GS+E V+ L D G ++N    S   ++LH AA + +P+ V+LL++ GA+P++ DE G+T
Sbjct: 386 FGSIEMVQYLCDKGSDVNKGHKS---SSLHYAACFGRPDVVKLLLQRGANPDLRDEDGKT 445

Query: 214 ALELAKE 221
           AL+ A+E
Sbjct: 446 ALDKARE 448

[Close]

BLAST of CsaV3_7G001450 vs. ExPASy Swiss-Prot
Match: Q29Q26 (Ankyrin repeat domain-containing protein 2B OS=Arabidopsis thaliana OX=3702 GN=AKR2B PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.6e-10
Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 117 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNS 176
           A   D   LK+ + SG  +D +  D +GRTAL F  G G V C ++L DAG N N  D +
Sbjct: 228 ASLGDVEGLKAALASGGNKDEE--DSEGRTALHFACGYGEVRCAQVLLDAGANANAIDKN 287

Query: 177 GGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAK 220
              T LH AAGY + E V LL+E GA     +   +  +++A+
Sbjct: 288 KN-TPLHYAAGYGRKECVSLLLENGAAVTQQNMDNKNPIDVAR 327

[Close]

BLAST of CsaV3_7G001450 vs. ExPASy TrEMBL
Match: A0A0A0K634 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018780 PE=4 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 6.7e-193
Identity = 341/355 (96.06%), Postives = 341/355 (96.06%), Query Frame = 0


Query: 1   MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDD 60
           MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDD
Sbjct: 1   MEAVFLNQSLSRLKLPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDD 60

Query: 61  ESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKA 120
           ESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKA
Sbjct: 61  ESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKA 120

Query: 121 DESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFT 180
           DESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFT
Sbjct: 121 DESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFT 180

Query: 181 ALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVI 240
           ALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVI
Sbjct: 181 ALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVI 240

Query: 241 RAV--------------EKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEY 300
           RAV              EKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEY
Sbjct: 241 RAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEY 300

Query: 301 AVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSNW 342
           AVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSNW
Sbjct: 301 AVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSNW 355

[Close]

BLAST of CsaV3_7G001450 vs. ExPASy TrEMBL
Match: A0A1S3BHX6 (signal recognition particle 43 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490246 PE=4 SV=1)

HSP 1 Score: 647.1 bits (1668), Expect = 4.1e-182
Identity = 327/356 (91.85%), Postives = 333/356 (93.54%), Query Frame = 0


Query: 1   MEAVFLNQSLSRLKLPPKTPL----PFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQK 60
           MEAVFLNQSLSRLKLPPK PL    PFPS IPHLNLRRNFTHFTAYAVQSDQPITQQT K
Sbjct: 1   MEAVFLNQSLSRLKLPPKPPLPLPIPFPSTIPHLNLRRNFTHFTAYAVQSDQPITQQTYK 60

Query: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120
           PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA
Sbjct: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120

Query: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNS 180
           AKKAD+SAL+SLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILA+AGVNLNHRDNS
Sbjct: 121 AKKADKSALESLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILAEAGVNLNHRDNS 180

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGL 240
           GGFTALHMAAGYVKPETVELLVELGADPEI+DEKGRTALELAKEILKATPRVQFMRRLGL
Sbjct: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGL 240

Query: 241 EKVIRAV--------------EKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEA 300
           EKVI AV              EKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV DYEA
Sbjct: 241 EKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADYEA 300

Query: 301 GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQS 339
           GLEYAVAEAVVGKRVGD+GKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ+
Sbjct: 301 GLEYAVAEAVVGKRVGDEGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQA 356

[Close]

BLAST of CsaV3_7G001450 vs. ExPASy TrEMBL
Match: A0A6J1EP65 (signal recognition particle 43 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111435281 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 1.0e-153
Identity = 281/354 (79.38%), Postives = 305/354 (86.16%), Query Frame = 0


Query: 1   MEAVFLNQSLSRLKLPPKTPLP-FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQK--- 60
           M+AVF+NQSLSRLKLPPK PLP  PSPI HL+LRR F  FTAYAV  ++P+TQQTQ+   
Sbjct: 57  MDAVFVNQSLSRLKLPPKPPLPKLPSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQPDN 116

Query: 61  -PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT 120
            PEDDESYGEVDGIIGSRAL DATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT
Sbjct: 117 FPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT 176

Query: 121 AAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDN 180
           AAKKADESALKSLID+ D RDF+AVDEDGRTALLFV+GLGS  C+RILA+AG +L+HRD 
Sbjct: 177 AAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDHRDK 236

Query: 181 SGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLG 240
           SGGFTALHMAAGYVKP TVELL+ELGADPE+ D+KGRT L LA+EI+KATPRVQF RRLG
Sbjct: 237 SGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLG 296

Query: 241 LEKVIRA--------------VEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYE 300
           LE+VI A              +EKRGKGENLEYLVKWKDGEDNEWVK  LIAEDLV D+E
Sbjct: 297 LERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFE 356

Query: 301 AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ 336
           AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDI+DATWEP  NVD DL+ EFE  Q
Sbjct: 357 AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEGNVDSDLVTEFETGQ 408

[Close]

BLAST of CsaV3_7G001450 vs. ExPASy TrEMBL
Match: A0A6J1JM92 (signal recognition particle 43 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486468 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 2.6e-152
Identity = 280/354 (79.10%), Postives = 304/354 (85.88%), Query Frame = 0


Query: 1   MEAVFLNQSLSRLKLPPKTPLP-FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQK--- 60
           M+AVF+NQSLS LKLPPK PLP  PSPI HL+LRR F  FTAYAV  ++P+TQQTQ+   
Sbjct: 50  MDAVFVNQSLSSLKLPPKPPLPKLPSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQPDN 109

Query: 61  -PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT 120
            PEDDESYGEVDGIIGSR+L DATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT
Sbjct: 110 FPEDDESYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT 169

Query: 121 AAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDN 180
           AAKKADESALKSLID+ D RDF+AVDEDGRTALLFV+GLGS  CVRILA+AG +L+HRD 
Sbjct: 170 AAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEAGADLDHRDK 229

Query: 181 SGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLG 240
           SGGFTALHMAAGYVKP TVELL+ELGADPE+ D+KGRT L LA+EI+KATPRVQF RRLG
Sbjct: 230 SGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFARRLG 289

Query: 241 LEKVIRA--------------VEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYE 300
           LE+VI A              +EKRGKGENLEYLVKWKDGEDNEWVK  LIAEDLV D+E
Sbjct: 290 LERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVADFE 349

Query: 301 AGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ 336
           AGLEYAVAEAVVGKR+GDDGKMEYLVKWTDI+DATWEP  NVD DLI EFE  Q
Sbjct: 350 AGLEYAVAEAVVGKRLGDDGKMEYLVKWTDIEDATWEPEGNVDSDLIAEFETGQ 401

[Close]

BLAST of CsaV3_7G001450 vs. ExPASy TrEMBL
Match: A0A6J1C248 (signal recognition particle 43 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007575 PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 2.3e-145
Identity = 268/363 (73.83%), Postives = 304/363 (83.75%), Query Frame = 0


Query: 1   MEAVFLNQSLSRLKLPPK-TPLP--FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQ-- 60
           M+A+FLNQS+SRLK+ PK +PLP  +PS IP+ NL+     F+A AVQ+DQ + QQ+   
Sbjct: 1   MDALFLNQSISRLKISPKSSPLPPLYPSRIPNRNLK-----FSACAVQNDQRLAQQSNAA 60

Query: 61  ----KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYET 120
               K  +DE+YGEVDGIIGSRAL D +GMEYLI WKDGH+PSWVPSDFIA+DVVAEYET
Sbjct: 61  ISAGKFNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYET 120

Query: 121 PWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLN 180
           PWWTAAKKADESALKSLID+ D RD DAVDEDGRTALLFV+GLGS  CVR+LA+ G N++
Sbjct: 121 PWWTAAKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVD 180

Query: 181 HRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFM 240
           HRDNSGGFTALHMAAGYVKP  VE L++LGA PE++DEKGRTALELA+EILKATPR+QF 
Sbjct: 181 HRDNSGGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQFG 240

Query: 241 RRLGLEKVIRA--------------VEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV 300
           RR+GLE+V+ A              +EKRGKGENLEYLVKWKDGEDNEWVK GLIA DLV
Sbjct: 241 RRMGLERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADLV 300

Query: 301 GDYEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ 341
            D+EAGLEYAVAEAV GKR+GDDGKMEYLVKWTDI+DATWEPLDNVDPDLI EFE AQAQ
Sbjct: 301 ADFEAGLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFEDAQAQ 358

[Close]

BLAST of CsaV3_7G001450 vs. TAIR 10
Match: AT2G47450.1 (chloroplast signal recognition particle component (CAO) )

HSP 1 Score: 388.3 bits (996), Expect = 6.5e-108
Identity = 214/362 (59.12%), Postives = 262/362 (72.38%), Query Frame = 0


Query: 3   AVFLNQSLSRLKL-PPKTPLP-----FPSPIPHLNLRRNFTHFTAYAVQSDQPITQQT-- 62
           A+ ++QSLSR+KL PPK+         P  +P   +   F      AVQ +   T  +  
Sbjct: 12  ALVIHQSLSRIKLSPPKSSSSSSSAFSPESLPIRRIELCFRGAICAAVQRNYEETTSSVE 71

Query: 63  QKPEDDE---SYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYET 122
           +  EDDE   SYGEV+ IIGSR   +   MEYLI+WKDGHSPSWVPS +IA DVV+EYET
Sbjct: 72  EAEEDDESSSSYGEVNKIIGSRTAGEG-AMEYLIEWKDGHSPSWVPSSYIAADVVSEYET 131

Query: 123 PWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLN 182
           PWWTAA+KADE AL  L+   ++RD DAVDE+GRTALLFV+GLGS +CVR+LA+AG +L+
Sbjct: 132 PWWTAARKADEQALSQLL---EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD 191

Query: 183 HRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPR---V 242
           HRD  GG TALHMAAGYV+PE VE LVELGAD E++DE+G TALELA+EILK TP+   +
Sbjct: 192 HRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPM 251

Query: 243 QFMRRLGLEKVIRA--------------VEKRGKGENLEYLVKWKDGEDNEWVKVGLIAE 302
           QF RR+GLEKVI                VEKRGKG+++EYLV+WKDG D EWVK   +AE
Sbjct: 252 QFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAE 311

Query: 303 DLVGDYEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIQDATWEPLDNVDPDLINEFEK 336
           D+  DYE GLEYAVAE+V+GKRVGDDGK +EYLVKWTD+ DATWEP DNVD  L+  +++
Sbjct: 312 DVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLVLLYQQ 369

[Close]

BLAST of CsaV3_7G001450 vs. TAIR 10
Match: AT4G35450.3 (ankyrin repeat-containing protein 2 )

HSP 1 Score: 69.7 bits (169), Expect = 5.1e-12
Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 117 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNS 176
           A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C ++L DAG ++N  D +
Sbjct: 226 ASLGDVEGLKAALASGGNKDEE--DSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 285

Query: 177 GGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAK-----EILKATPRVQFM 232
              T LH AAGY + E V LL+E GA   + +   +T +++AK     E++K   +  F+
Sbjct: 286 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEKDAFL 342

[Close]

BLAST of CsaV3_7G001450 vs. TAIR 10
Match: AT4G35450.4 (ankyrin repeat-containing protein 2 )

HSP 1 Score: 69.7 bits (169), Expect = 5.1e-12
Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 117 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNS 176
           A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C ++L DAG ++N  D +
Sbjct: 188 ASLGDVEGLKAALASGGNKDEE--DSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 247

Query: 177 GGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAK-----EILKATPRVQFM 232
              T LH AAGY + E V LL+E GA   + +   +T +++AK     E++K   +  F+
Sbjct: 248 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEKDAFL 304

[Close]

BLAST of CsaV3_7G001450 vs. TAIR 10
Match: AT4G35450.2 (ankyrin repeat-containing protein 2 )

HSP 1 Score: 69.7 bits (169), Expect = 5.1e-12
Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 117 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNS 176
           A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C ++L DAG ++N  D +
Sbjct: 226 ASLGDVEGLKAALASGGNKDEE--DSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 285

Query: 177 GGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAK-----EILKATPRVQFM 232
              T LH AAGY + E V LL+E GA   + +   +T +++AK     E++K   +  F+
Sbjct: 286 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEKDAFL 342

[Close]

BLAST of CsaV3_7G001450 vs. TAIR 10
Match: AT4G35450.1 (ankyrin repeat-containing protein 2 )

HSP 1 Score: 69.7 bits (169), Expect = 5.1e-12
Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 117 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNS 176
           A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C ++L DAG ++N  D +
Sbjct: 226 ASLGDVEGLKAALASGGNKDEE--DSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 285

Query: 177 GGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAK-----EILKATPRVQFM 232
              T LH AAGY + E V LL+E GA   + +   +T +++AK     E++K   +  F+
Sbjct: 286 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEKDAFL 342

The following BLAST results are available for this feature:

BLAST of CsaV3_7G001450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645681.1	1.7e-195	100.00	hypothetical protein Csa_020568 [Cucumis sativus]	[more]
XP_004153574.1	1.4e-192	96.06	signal recognition particle 43 kDa protein, chloroplastic [Cucumis sativus]	[more]
XP_008447899.1	8.4e-182	91.85	PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis me...	[more]
XP_038888741.1	6.2e-169	86.20	signal recognition particle 43 kDa protein, chloroplastic [Benincasa hispida]	[more]
KAG6589032.1	2.1e-153	79.38	Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita ar...	[more]

BLAST of CsaV3_7G001450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22265	9.2e-107	59.12	Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thalian...	[more]
Q8LSQ2	1.1e-86	48.55	Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sati...	[more]
Q9SAR5	7.2e-11	35.83	Ankyrin repeat domain-containing protein 2A OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
V6CLA2	7.2e-11	33.86	E3 ubiquitin-protein ligase hecd-1 OS=Caenorhabditis elegans OX=6239 GN=hecd-1 P...	[more]
Q29Q26	3.6e-10	38.83	Ankyrin repeat domain-containing protein 2B OS=Arabidopsis thaliana OX=3702 GN=A...	[more]

BLAST of CsaV3_7G001450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K634	6.7e-193	96.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018780 PE=4 SV=1	[more]
A0A1S3BHX6	4.1e-182	91.85	signal recognition particle 43 kDa protein, chloroplastic OS=Cucumis melo OX=365...	[more]
A0A6J1EP65	1.0e-153	79.38	signal recognition particle 43 kDa protein, chloroplastic-like OS=Cucurbita mosc...	[more]
A0A6J1JM92	2.6e-152	79.10	signal recognition particle 43 kDa protein, chloroplastic OS=Cucurbita maxima OX...	[more]
A0A6J1C248	2.3e-145	73.83	signal recognition particle 43 kDa protein, chloroplastic OS=Momordica charantia...	[more]

BLAST of CsaV3_7G001450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47450.1	6.5e-108	59.12	chloroplast signal recognition particle component (CAO)	[more]
AT4G35450.3	5.1e-12	35.83	ankyrin repeat-containing protein 2	[more]
AT4G35450.4	5.1e-12	35.83	ankyrin repeat-containing protein 2	[more]
AT4G35450.2	5.1e-12	35.83	ankyrin repeat-containing protein 2	[more]
AT4G35450.1	5.1e-12	35.83	ankyrin repeat-containing protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 108..139 e-value: 240.0 score: 9.6 coord: 143..172 e-value: 1.1 score: 18.3 coord: 177..206 e-value: 4.6E-4 score: 29.5
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 143..175 score: 10.36565
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 177..209 score: 11.80799
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 286..336 e-value: 3.4E-7 score: 39.9 coord: 236..285 e-value: 0.13 score: 21.4 coord: 62..114 e-value: 2.7E-4 score: 30.3
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 287..341 score: 11.254301
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 234..266 score: 8.557401
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 116..207 e-value: 3.2E-11 score: 43.7
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 108..243 e-value: 1.7E-36 score: 126.8
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 109..220
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 289..333 e-value: 8.6E-8 score: 32.0
None	No IPR available	GENE3D	2.40.50.40		coord: 61..107 e-value: 2.0E-15 score: 58.0
None	No IPR available	GENE3D	2.40.50.40		coord: 279..335 e-value: 2.3E-25 score: 89.9
None	No IPR available	GENE3D	2.40.50.40		coord: 244..273 e-value: 4.4E-8 score: 34.8
None	No IPR available	PANTHER	PTHR24128	HOMEOBOX PROTEIN WARIAI	coord: 1..337
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 177..209 score: 10.444637
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 143..175 score: 9.011944
None	No IPR available	CDD	cd00024	CD_CSD	coord: 286..333 e-value: 1.32647E-10 score: 54.0201
IPR030300	Signal recognition particle 43kDa protein	PANTHER	PTHR24128:SF43	SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC	coord: 1..337
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 241..282
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 285..333
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 59..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G001450.1	CsaV3_7G001450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045038	protein import into chloroplast thylakoid membrane
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0080085	signal recognition particle, chloroplast targeting
molecular_function	GO:0005515	protein binding