CsaV3_7G001160 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G001160
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Protein translocase complex, SecE/Sec61-gamma subunit
Location	chr7: 1025930 .. 1029505 (+)
RNA-Seq Expression	CsaV3_7G001160
Synteny	CsaV3_7G001160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCATACATGTCCAAAGTCTTTTGTATCACAAGGAGTGGAGCAATTCCTCCATATGGGTCATCCTTACCAAAATTCCTATTGACGAGGTTATATGGAAATTAGAAAAGGGGAAGAAAGAAAAAGAGCCTCAAGCCTTCATTAGCAGCTGCCCGACCCACCCCGGTTGCAAACCTCTTCGCCGGCTACAACATACCACGAGCGACGGCGGGCCTAAATTCTTCTGGATTTCGACAACCTCATACCCTGTGAGCTCCTGTGTTGACGGCAGTACCCACGAAACCCAACCGAGGTAACTGCGTTAGCTTCGTCGGTGTACTCTTTTTTTTTTTTTACGGTGAGTCTCTTCTTCTTCACCGCTCTTTAGTTTGCGAATGCAGCACCAGCAGCGTTTTCTTTTACTACTCTCGAAGTATTCGATTAAGGTTCTTTTAAGTATTAACATATTTCGAACCCTTTTGGACCCGAGTTAAATTATGTTAGATTATTCTTTCACACGCTGAAGCTATCTGTTTGTAGTATTGGACGGATTTGAAGTGGTTGATTAAAGTTTATGGTGGATTATGAGTAAAAATATTCACCATGAAGACACGAGCAATCTCTCGGTGTCTCTTAGTAGTTATTGAAGTTTATAGCAGCGTTCTAACACCTATACGCTGTTTCTATTGTTTAGGCTTATATGCTGTTGAGGCTTCGTTCAAGGTTTTGGATTTTGGATTGAGAACAATAAATTTTCCGTCCAGGTAAGCAGTTTCCACATACCTTTCAAAATATAAAATTGACAAAATTGTGTTTTAAAAAATGTTGGAAGTATGTTGTGAACATTTGAAAATACGTTTGTATGATTTGAGGATTGACCAAAATTGTTTTGTTTGTTTCTAATGGTTTTTGCTAAATGAAAGTATAGACTATTTCAAACGACTTTTTTGGAAGCGTTTTGAAATTAAAAGTATGTTTCAGTTCAGTCCACTTATGAAAGTTTGAATGGTTAGATTTGATGAATTTTCAAATGAAATTGCTAATTGAAACTAAATGCTTTGTTTCAAATGCTTGTTTAAGATTTCTGATTGATACAAAATGGTTATTCGGATACGCCAAGATTTTGTTTTGAAAATTGTTTGCTTCTTTTTGTAGTCATAGCAAATTGATTGATTGAAATTATGTGAGACGACACATTTTGTGGTTTGGCATTCCTTTGGAATGAAGATTCATGTGTGTTGCACTCATGACTCATATGACCTCACATATAAGTAATTGAATGTTTTGGTCTATTGCTAATGGACTTCTCTAATTGAATGAATGAATAACTGGTGTTACTAATGAGTAACCACATATGTCTCAATTATGCATCTTTTCTACTCTGATAATCAAAAGTATTGATTGATTGAAAATTCCGTCTAGTCCAAAGTATTGAATGTATTGAAATATTTGCTGTTTTATTTAAGGGCTGAACAAAGTTTTGCTTGTTTAAAGGTATTACAAGTTTATTCGAATGTTTTGGTTTTATTGGAACTACTATATGAAAATTTTAGATCGAGACATTTAGTTTTAAAAGCTTATTTGATTGAAGGATTTTGGTTTTAAAAGCATTTTCTGTAACAAAGTTTTCACTGAAAGTTTAGCAAGGATTTATATTTTTGTTACAAAAATTTGAAAGAAAAAAAAAGAATTTTGAAGCTTGGTATTGGAATTGCTTGTTAAGTATTTTTTTACTCATTTCTGTTTCTCCAAAATGTTTTCAGATGAAGGATCAGGTGACAGTTGTGAAAGAAGCAAAGTTTGGCCTTGATGCTTTTGTTTTAAGGATTTGTTAGATTATCTTAAAAGTCGTTTTTGCTGAATCATATAAGTTGTTATACTGTGCGAAGATTATGTCTTTGCATTATAGTTTGTTATAGCTTTGTTGAACAATACAGGCCGTTACACTGTTGAAACACTATTGTAGCGCAAATATCATAATCTATCTTATTCAGAGTAACAATTAAGCTGTTTGATAGAGTTTCGAGCAACTGGCAAATCATATAATAAATTGTATGTTTATTTGTCTATTTCACATTGATTTTGTAATGGATTGATAGTAAGCATGTTTTGTACCCTGTTGCAGTGGTGTTGTCGAACTCTTGCTCTAAAATGGTGATCACTTCTACACTTGGCACTCCTCATATTGGTAAGTCCACTTTTCTCTTTCTCATAATATATCTTTTTTTTTCTTTTGTTCAAGTATCATTTTGGTCCTCATTGAAACTTGTTTCATTCTAGGTATAATTTGTCTTCCTCAGTCCAAGGAGCCATACCACGTTCTACAGTACAACACAACAAGATTAAATAAATCCAGTCTCTTTCAGAGACTGCACACAAGGGTACTTTCTACTCATTTCAAACTTAAAATTTGATTGCTATTACAGTCTGATCTTTCAATTTCTGTTTGTTACTTTAGATTTCCAAAAGGAGTGGACATCATCTCTATGCTGGGAGAATGGGCTTTAACCATGCTGCATTGGAACAAAATTATCAGCAACCGAGCTTTAATGATGAATTGCCTCCAGAACCTTTCTTCTTGAGTCTGATTAAAGAAACCTTTTGGTAATCTTTCCCACCTCTTTCTCCCATCTTAATCATGAATGTTGGACGTTGAAAATTAGAGCTGGTTTTAGTCCTACAATCACTTATTTGTATTACTGGAGGTATATTTTCCCTGTTCTGCTTATTCCAATGTGCCCATATCTGCGCTTTATCCGGTCACTAAAACGGTGTCGGATGGTTAGTTTTTTTTGTTCATTAAAAAAAAAAGTCTCATGAATGTTGGTCCATCTTGTTTTTGAATGGTTTTGTTTTGAACTTTAGGGGATTGAGATCATTGTTAATATTTCTGGTCGAGCAGCCTAGTCAACTGAAGTACATTGAATGGCCTAGCTTCCAAAGCACGGTACGAAGGCAAGATTATTATGTTAAATATTGCGCATGTGCATTGTCTTCTTGTAGTTGTAAGATTCATATTTGATAAAACACTTTAACTCATAATCCCAATTCACTTAATATTATCTCTGAACTTTGGCTTTTATTGTAATTTCAATCTAATTTGGTGCAGCTGAAGACTGCCACATTAGCTCTCGTTCTGGTTGCTCTGTTGATCGTAGCGCTCTCGTCAGTGGACTCAGCGCTCAGCTATGTTTTGACTTTAATTCTCAGAAGAACCTTATAATAAATGATGCTACTCTTCTCCTATTGGTCTATCAGTAGGTCAGAAATTTAACTTCTCTTTGCCATTTTTAAAATGATTACTCAGAGTGAAAGTTCTTGGTATGTTAATGTAGTTGGAGATGTTCTGAAATAGGTAATGCATAACTCTTTGAAATCGTGCAACTAGGAAAGTAGAGAATGTCATTTTCCACGTTTCTCACATACGTATACTTATGACCATCCCCATATGTATAAATAGGGTACAATCATAAGTAACAATGATACACTTCCCTTGTAATTAAGGCTCTTGTGGTGTAAGTGGTTTGGCCGGAACCATCTTACATAATAATAATTGAAAACTCGAACCCACAATTGGCACTTTAGTCCCCAAAACAAA

mRNA sequence

ATGGTGATCACTTCTACACTTGGCACTCCTCATATTGGTATAATTTGTCTTCCTCAGTCCAAGGAGCCATACCACGTTCTACAGTACAACACAACAAGATTAAATAAATCCAGTCTCTTTCAGAGACTGCACACAAGGATTTCCAAAAGGAGTGGACATCATCTCTATGCTGGGAGAATGGGCTTTAACCATGCTGCATTGGAACAAAATTATCAGCAACCGAGCTTTAATGATGAATTGCCTCCAGAACCTTTCTTCTTGAGTCTGATTAAAGAAACCTTTTGGGGATTGAGATCATTGTTAATATTTCTGGTCGAGCAGCCTAGTCAACTGAAGTACATTGAATGGCCTAGCTTCCAAAGCACGCTGAAGACTGCCACATTAGCTCTCGTTCTGGTTGCTCTGTTGATCGTAGCGCTCTCGTCAGTGGACTCAGCGCTCAGCTATGTTTTGACTTTAATTCTCAGAAGAACCTTATAA

Coding sequence (CDS)

ATGGTGATCACTTCTACACTTGGCACTCCTCATATTGGTATAATTTGTCTTCCTCAGTCCAAGGAGCCATACCACGTTCTACAGTACAACACAACAAGATTAAATAAATCCAGTCTCTTTCAGAGACTGCACACAAGGATTTCCAAAAGGAGTGGACATCATCTCTATGCTGGGAGAATGGGCTTTAACCATGCTGCATTGGAACAAAATTATCAGCAACCGAGCTTTAATGATGAATTGCCTCCAGAACCTTTCTTCTTGAGTCTGATTAAAGAAACCTTTTGGGGATTGAGATCATTGTTAATATTTCTGGTCGAGCAGCCTAGTCAACTGAAGTACATTGAATGGCCTAGCTTCCAAAGCACGCTGAAGACTGCCACATTAGCTCTCGTTCTGGTTGCTCTGTTGATCGTAGCGCTCTCGTCAGTGGACTCAGCGCTCAGCTATGTTTTGACTTTAATTCTCAGAAGAACCTTATAA

Protein sequence

MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRMGFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYVLTLILRRTL*

Homology

[Close]

BLAST of CsaV3_7G001160 vs. NCBI nr
Match: XP_004144859.1 (uncharacterized protein LOC101211352 isoform X2 [Cucumis sativus] >KGN43268.1 hypothetical protein Csa_020454 [Cucumis sativus])

HSP 1 Score: 307.4 bits (786), Expect = 7.4e-80
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60
           MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM
Sbjct: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60

Query: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120
           GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRTL 160
           STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRTL
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRTL 159

[Close]

BLAST of CsaV3_7G001160 vs. NCBI nr
Match: XP_008447932.1 (PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo] >XP_008447935.1 PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo] >KAA0025129.1 Protein translocase complex, SecE/Sec61-gamma subunit [Cucumis melo var. makuwa] >TYK19371.1 Protein translocase complex, SecE/Sec61-gamma subunit [Cucumis melo var. makuwa])

HSP 1 Score: 273.5 bits (698), Expect = 1.2e-69
Identity = 146/158 (92.41%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60
           MVITSTLGT HIGIICLPQ K  YHVL+YN TRLNKSSLFQRLHTRISKRSG HLYAGRM
Sbjct: 1   MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRM 60

Query: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120
           GFNHAA  QNYQQPSFNDE P EPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRT 159
           STLKTATLALVLVALLIVALSSVDSALSYVLTL+LRRT
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRT 156

[Close]

BLAST of CsaV3_7G001160 vs. NCBI nr
Match: XP_011658604.1 (uncharacterized protein LOC101211352 isoform X3 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 4.3e-64
Identity = 122/125 (97.60%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60
           MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM
Sbjct: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60

Query: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120
           GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKT 126
           ST+++
Sbjct: 121 STVRS 125

[Close]

BLAST of CsaV3_7G001160 vs. NCBI nr
Match: XP_038888680.1 (uncharacterized protein LOC120078486 [Benincasa hispida] >XP_038888681.1 uncharacterized protein LOC120078486 [Benincasa hispida] >XP_038888682.1 uncharacterized protein LOC120078486 [Benincasa hispida])

HSP 1 Score: 253.8 bits (647), Expect = 9.7e-64
Identity = 131/158 (82.91%), Postives = 140/158 (88.61%), Query Frame = 0


Query: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60
           MVI S LG   IG +C+PQSKEP+HVL YNT R NKS++ QRLHTRISKR+GHH+YAGRM
Sbjct: 1   MVIASALGANPIGTVCIPQSKEPFHVLHYNTARFNKSTILQRLHTRISKRTGHHVYAGRM 60

Query: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120
           GFNHAA  Q+ QQ SFNDE PPEPFFLSLIKET WGLRSLLIFL EQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAASGQDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRT 159
           STLKTATLALVLVALLIVALSSVDSALSY+LTL LRRT
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYILTLFLRRT 158

[Close]

BLAST of CsaV3_7G001160 vs. NCBI nr
Match: XP_031744310.1 (uncharacterized protein LOC101211352 isoform X1 [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 2.2e-63
Identity = 127/148 (85.81%), Postives = 133/148 (89.86%), Query Frame = 0


Query: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60
           MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM
Sbjct: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60

Query: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120
           GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSSVDSALS 149
           ST++     +   A  + + SS D  +S
Sbjct: 121 STVRRQDYYVKYCACALSSCSSEDCHIS 148

[Close]

BLAST of CsaV3_7G001160 vs. ExPASy TrEMBL
Match: A0A0A0K1C8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014540 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.6e-80
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60
           MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM
Sbjct: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60

Query: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120
           GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRTL 160
           STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRTL
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRTL 159

[Close]

BLAST of CsaV3_7G001160 vs. ExPASy TrEMBL
Match: A0A1S3BJG9 (uncharacterized protein LOC103490269 OS=Cucumis melo OX=3656 GN=LOC103490269 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 5.7e-70
Identity = 146/158 (92.41%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60
           MVITSTLGT HIGIICLPQ K  YHVL+YN TRLNKSSLFQRLHTRISKRSG HLYAGRM
Sbjct: 1   MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRM 60

Query: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120
           GFNHAA  QNYQQPSFNDE P EPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRT 159
           STLKTATLALVLVALLIVALSSVDSALSYVLTL+LRRT
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRT 156

[Close]

BLAST of CsaV3_7G001160 vs. ExPASy TrEMBL
Match: A0A5A7SIK1 (Protein translocase complex, SecE/Sec61-gamma subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3037G00250 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 5.7e-70
Identity = 146/158 (92.41%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60
           MVITSTLGT HIGIICLPQ K  YHVL+YN TRLNKSSLFQRLHTRISKRSG HLYAGRM
Sbjct: 1   MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRM 60

Query: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120
           GFNHAA  QNYQQPSFNDE P EPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ
Sbjct: 61  GFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRT 159
           STLKTATLALVLVALLIVALSSVDSALSYVLTL+LRRT
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRT 156

[Close]

BLAST of CsaV3_7G001160 vs. ExPASy TrEMBL
Match: A0A6J1EK97 (uncharacterized protein LOC111435124 OS=Cucurbita moschata OX=3662 GN=LOC111435124 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 7.5e-54
Identity = 119/158 (75.32%), Postives = 130/158 (82.28%), Query Frame = 0


Query: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60
           MVI S LG  HIG+  LP S  P+HV +YNT RLNK+++FQ L TRIS+R G HLYA RM
Sbjct: 73  MVIASALGANHIGMASLPHSNRPFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRM 132

Query: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120
           GFNHAA  ++ QQ  FNDELPPEPFFL +IKET WGLRSL IFL EQPSQLKYIEWPSFQ
Sbjct: 133 GFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQ 192

Query: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRT 159
           STLKTAT ALVLVALLIVALSSVDS LSY+LT ILRRT
Sbjct: 193 STLKTATFALVLVALLIVALSSVDSVLSYILTFILRRT 228

[Close]

BLAST of CsaV3_7G001160 vs. ExPASy TrEMBL
Match: A0A6J1C3M0 (uncharacterized protein LOC111008049 OS=Momordica charantia OX=3673 GN=LOC111008049 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 3.1e-52
Identity = 115/158 (72.78%), Postives = 128/158 (81.01%), Query Frame = 0


Query: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60
           M I S LG  HIG+IC P  K+P H+L  NT R NKS+ FQ+L   IS+RSG HLYAGRM
Sbjct: 1   MAIASALGANHIGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSG-HLYAGRM 60

Query: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120
            FNHAA  +   Q +FN+E PPEPF LSLI+E  WGLRSLLIFLVEQPSQLKYIEWPSFQ
Sbjct: 61  SFNHAASGRENHQLNFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRT 159
           STLKTATL LVLVALLIVALSSVDSALSY+LTL+LRR+
Sbjct: 121 STLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRS 157

[Close]

BLAST of CsaV3_7G001160 vs. TAIR 10
Match: AT4G38490.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-21
Identity = 55/84 (65.48%), Postives = 68/84 (80.95%), Query Frame = 0


Query: 75  SFNDELP-PEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQSTLKTATLALVLV 134
           S + +LP  EP +LSL+++  W  RSLL F+ EQPSQLKYIEWP+F STLKTATL+L LV
Sbjct: 68  SSHKKLPEEEPLWLSLLRDMVWSTRSLLSFMAEQPSQLKYIEWPTFASTLKTATLSLCLV 127

Query: 135 ALLIVALSSVDSALSYVLTLILRR 158
           A+ IVALSSVD+AL Y+L LILR+
Sbjct: 128 AVFIVALSSVDAALCYILALILRK 151

The following BLAST results are available for this feature:

BLAST of CsaV3_7G001160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144859.1	7.4e-80	100.00	uncharacterized protein LOC101211352 isoform X2 [Cucumis sativus] >KGN43268.1 hy...	[more]
XP_008447932.1	1.2e-69	92.41	PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo] >XP_008447935.1 P...	[more]
XP_011658604.1	4.3e-64	97.60	uncharacterized protein LOC101211352 isoform X3 [Cucumis sativus]	[more]
XP_038888680.1	9.7e-64	82.91	uncharacterized protein LOC120078486 [Benincasa hispida] >XP_038888681.1 unchara...	[more]
XP_031744310.1	2.2e-63	85.81	uncharacterized protein LOC101211352 isoform X1 [Cucumis sativus]	[more]

BLAST of CsaV3_7G001160 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_7G001160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1C8	3.6e-80	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014540 PE=3 SV=1	[more]
A0A1S3BJG9	5.7e-70	92.41	uncharacterized protein LOC103490269 OS=Cucumis melo OX=3656 GN=LOC103490269 PE=...	[more]
A0A5A7SIK1	5.7e-70	92.41	Protein translocase complex, SecE/Sec61-gamma subunit OS=Cucumis melo var. makuw...	[more]
A0A6J1EK97	7.5e-54	75.32	uncharacterized protein LOC111435124 OS=Cucurbita moschata OX=3662 GN=LOC1114351...	[more]
A0A6J1C3M0	3.1e-52	72.78	uncharacterized protein LOC111008049 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

BLAST of CsaV3_7G001160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38490.1	1.7e-21	65.48	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038379	SecE superfamily	GENE3D	1.20.5.1030	Preprotein translocase secy subunit	coord: 98..154 e-value: 1.2E-5 score: 27.0
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	PFAM	PF00584	SecE	coord: 103..155 e-value: 6.7E-8 score: 32.3
None	No IPR available	PANTHER	PTHR37247	TRANSMEMBRANE PROTEIN	coord: 1..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G001160.1	CsaV3_7G001160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006605	protein targeting
cellular_component	GO:0016020	membrane