
CsaV3_7G000150 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ACTTAATTCAATTCCTTCTCCTTTCTCTTTATAATTATTGCAAAAATGGAAGATAAAGGAAACAGCATGATGGCTTTTGATATGGGTTCTCTTAGAACAAATCTTCCTCAAAAGTAAGCAATTCATCCATATACGTTTTTATGTAAATTCTTCCAATAATTATGTGCCTAATTTTTCACTATTCAAATATTCTTTTTTATTTGAATCTATTTTTAGTTAGCATCTACTTTTGCAGAAGCTTACGTAATAGTAAAATCACATTTTGTGATCAAGTGACAATTTTTTTTTATTATTATTATTCTTTCGAGTTTTAACCAACACTTCAAACATAGACGTTAGATATTACACAATCGTTTATAACAATAATGTTATTTGTTGGTGTTTTGAGTATAGGAGAGGTTTATCGAGATACTATTCTGGAAAAGCAAGATCATTTGCTTGCATAGCCGATGTTCGAAGTGTAGAAGATTTGAAGAAACCAAAACATCCTGATGCTAAGAAAAGGAAGAAACATTCTGATATCAAAGAAATAATAATCAATGTTCCTCCCTTTCATTGTCGACGAGTTTCTTCTCACTGTTCCGTTCCCTTCATTGCCACATGAATAATACACACTCTCTCCTAAACTAATTTTCTCAAAAGACTGAGTATAATTCGAATATCTAAAGCTTTGGTCCAAGGGAATAATAATAGCTTATAATCTAGTTGAACTATGTTTAAGTTTGTAATGGTTTTAATTTATGTTGTTCTTTATTTCCTTGATCATGTGTATATTGAAAAACTGTA ATGGAAGATAAAGGAAACAGCATGATGGCTTTTGATATGGGTTCTCTTAGAACAAATCTTCCTCAAAAGAGAGGTTTATCGAGATACTATTCTGGAAAAGCAAGATCATTTGCTTGCATAGCCGATGTTCGAAGTGTAGAAGATTTGAAGAAACCAAAACATCCTGATGCTAAGAAAAGGAAGAAACATTCTGATATCAAAGAAATAATAATCAATGTTCCTCCCTTTCATTGTCGACGAGTTTCTTCTCACTGTTCCGTTCCCTTCATTGCCACATGA ATGGAAGATAAAGGAAACAGCATGATGGCTTTTGATATGGGTTCTCTTAGAACAAATCTTCCTCAAAAGAGAGGTTTATCGAGATACTATTCTGGAAAAGCAAGATCATTTGCTTGCATAGCCGATGTTCGAAGTGTAGAAGATTTGAAGAAACCAAAACATCCTGATGCTAAGAAAAGGAAGAAACATTCTGATATCAAAGAAATAATAATCAATGTTCCTCCCTTTCATTGTCGACGAGTTTCTTCTCACTGTTCCGTTCCCTTCATTGCCACATGA MEDKGNSMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDIKEIIINVPPFHCRRVSSHCSVPFIAT* Homology
BLAST of CsaV3_7G000150 vs. NCBI nr
Match: KGN43154.1 (hypothetical protein Csa_020555 [Cucumis sativus]) HSP 1 Score: 190.7 bits (483), Expect = 5.8e-45 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CsaV3_7G000150 vs. NCBI nr
Match: KAA0033797.1 (hypothetical protein E6C27_scaffold142G00550 [Cucumis melo var. makuwa] >TYK22337.1 hypothetical protein E5676_scaffold1428G00540 [Cucumis melo var. makuwa]) HSP 1 Score: 165.2 bits (417), Expect = 2.6e-37 Identity = 81/85 (95.29%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of CsaV3_7G000150 vs. NCBI nr
Match: KAG6588432.1 (hypothetical protein SDJN03_16997, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 143.3 bits (360), Expect = 1.1e-30 Identity = 72/93 (77.42%), Postives = 78/93 (83.87%), Query Frame = 0
BLAST of CsaV3_7G000150 vs. NCBI nr
Match: TQE06317.1 (hypothetical protein C1H46_008086 [Malus baccata]) HSP 1 Score: 122.9 bits (307), Expect = 1.5e-24 Identity = 61/90 (67.78%), Postives = 73/90 (81.11%), Query Frame = 0
BLAST of CsaV3_7G000150 vs. NCBI nr
Match: ONH91050.1 (hypothetical protein PRUPE_8G090300 [Prunus persica]) HSP 1 Score: 121.7 bits (304), Expect = 3.3e-24 Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = 0
BLAST of CsaV3_7G000150 vs. ExPASy TrEMBL
Match: A0A0A0K2B1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004070 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 2.8e-45 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CsaV3_7G000150 vs. ExPASy TrEMBL
Match: A0A5A7SX13 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00540 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.3e-37 Identity = 81/85 (95.29%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of CsaV3_7G000150 vs. ExPASy TrEMBL
Match: A0A540N5I5 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_008086 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 7.2e-25 Identity = 61/90 (67.78%), Postives = 73/90 (81.11%), Query Frame = 0
BLAST of CsaV3_7G000150 vs. ExPASy TrEMBL
Match: M5VHW2 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G090300 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.6e-24 Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = 0
BLAST of CsaV3_7G000150 vs. ExPASy TrEMBL
Match: A0A061E0R1 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_006830 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.1e-24 Identity = 65/92 (70.65%), Postives = 75/92 (81.52%), Query Frame = 0
BLAST of CsaV3_7G000150 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 ) HSP 1 Score: 47.8 bits (112), Expect = 5.7e-06 Identity = 20/40 (50.00%), Postives = 31/40 (77.50%), Query Frame = 0
BLAST of CsaV3_7G000150 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 7.4e-06 Identity = 21/49 (42.86%), Postives = 35/49 (71.43%), Query Frame = 0
BLAST of CsaV3_7G000150 vs. TAIR 10
Match: AT3G03170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 1.7e-05 Identity = 24/60 (40.00%), Postives = 37/60 (61.67%), Query Frame = 0
BLAST of CsaV3_7G000150 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 2.4e-04 Identity = 21/57 (36.84%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of CsaV3_7G000150 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 40.8 bits (94), Expect = 7.0e-04 Identity = 20/47 (42.55%), Postives = 30/47 (63.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|